Guide to the Human Genome
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Name: CUL1 Sequence: fasta or formatted (776aa) NCBI GI: 32307161
Description:

cullin 1

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         46           2
 C cysteine            1.5         12           1
 D aspartate           5.3         41           2
 E glutamate           8.0         62           2
 F phenylalanine       3.7         29           1
 G glycine             4.1         32           2
 H histidine           1.9         15           1
 I isoleucine          4.3         33           1
 K lysine              8.8         68           2
 L leucine            12.0         93           2
 M methionine          2.3         18           1
 N asparagine          4.9         38           3
 P proline             2.2         17           2
 Q glutamine           6.8         53           2
 R arginine            5.0         39           2
 S serine              6.6         51           3
 T threonine           5.3         41           2
 V valine              6.1         47           2
 W tryptophan          0.8          6           1
 Y tyrosine            4.5         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cullin 1 
CUL2                  0.324   cullin 2 
CUL3                  0.229   cullin 3 
CUL5                  0.208   Vasopressin-activated calcium-mobilizing receptor-1 ...
CUL4B                 0.208   cullin 4B isoform 2 
CUL4B                 0.208   cullin 4B isoform 1 
CUL4A                 0.200   cullin 4A isoform 1 
CUL4A                 0.200   cullin 4A isoform 2 
ANAPC2                0.023   anaphase-promoting complex subunit 2 
CUL7                  0.020   cullin 7 
LOC650621             0.009   PREDICTED: similar to anaphase-promoting complex su...
TPR                   0.009   nuclear pore complex-associated protein TPR 
GCC2                  0.007   GRIP and coiled-coil domain-containing 2 
CLIP1                 0.007   restin isoform b 
CLIP1                 0.007   restin isoform a 
TXLNB                 0.006   taxilin beta 
NUMA1                 0.006   nuclear mitotic apparatus protein 1 
FLOT2                 0.005   flotillin 2 
CCDC18                0.005   sarcoma antigen NY-SAR-41 
HSP90AA1              0.005   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.005   heat shock 90kDa protein 1, alpha isoform 1 
FILIP1                0.005   filamin A interacting protein 1 
TTC25                 0.005   tetratricopeptide repeat domain 25 
GOLGB1                0.005   golgi autoantigen, golgin subfamily b, macrogolgin ...
NIN                   0.004   ninein isoform 4 
NIN                   0.004   ninein isoform 5 
NIN                   0.004   ninein isoform 1 
NIN                   0.004   ninein isoform 2 
DPY19L1               0.004   dpy-19-like 1 
MMRN2                 0.004   multimerin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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