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Search of human proteins with 32261320
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32261320 PSMC3 interacting protein isoform 1 [Homo sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32261320 PSMC3 interacting protein isoform 1 [Homo sapiens] 409 e-114
gi|7706577 PSMC3 interacting protein isoform 2 [Homo sapiens] 400 e-112
gi|94721321 coiled-coil domain containing 11 [Homo sapiens] 39 0.002
gi|148746195 trichohyalin [Homo sapiens] 37 0.012
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.015
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 36 0.020
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 36 0.026
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 36 0.026
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 36 0.026
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 35 0.034
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 35 0.034
gi|75677351 suppressor of defective silencing 3 [Homo sapiens] 35 0.034
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 35 0.034
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 35 0.034
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 35 0.045
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 35 0.045
gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens] 35 0.045
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 35 0.045
gi|95089461 discs large homolog 5 [Homo sapiens] 34 0.076
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 34 0.076
gi|229577185 epidermal growth factor receptor pathway substrate ... 34 0.099
gi|4503593 epidermal growth factor receptor pathway substrate 15... 34 0.099
gi|153791352 prostate, ovary, testis expressed protein on chromo... 34 0.099
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 34 0.099
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap... 34 0.099
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap... 34 0.099
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap... 34 0.099
gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo ... 33 0.13
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 33 0.13
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 0.17
>gi|32261320 PSMC3 interacting protein isoform 1 [Homo sapiens]
Length = 205
Score = 409 bits (1050), Expect = e-114
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI
Sbjct: 1 MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
Query: 61 KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQE 120
KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQE
Sbjct: 61 KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQE 120
Query: 121 LKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYP 180
LKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYP
Sbjct: 121 LKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYP 180
Query: 181 KSKKQFFEEVGIETDEDYNVTLPDP 205
KSKKQFFEEVGIETDEDYNVTLPDP
Sbjct: 181 KSKKQFFEEVGIETDEDYNVTLPDP 205
>gi|7706577 PSMC3 interacting protein isoform 2 [Homo sapiens]
Length = 217
Score = 400 bits (1027), Expect = e-112
Identities = 205/217 (94%), Positives = 205/217 (94%), Gaps = 12/217 (5%)
Query: 1 MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI
Sbjct: 1 MSKGRAEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKI 60
Query: 61 KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEA-------- 112
KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEA
Sbjct: 61 KEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSA 120
Query: 113 ----EMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 168
EMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA
Sbjct: 121 LTTPEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMA 180
Query: 169 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 205
TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP
Sbjct: 181 TELSDAILEGYPKSKKQFFEEVGIETDEDYNVTLPDP 217
>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
Length = 514
Score = 39.3 bits (90), Expect = 0.002
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 39 EHGLGKAVVVKTLEQLAQQGKIK----EKMYGKQKIYF-----------ADQDQFDMVSD 83
E L +V + L+ L ++ K E M +QKIY A + +FD + +
Sbjct: 306 EQDLNMKLVQRALQDLQEEADKKKQKREDMIREQKIYHKYLAQRREEEKAQEKEFDRILE 365
Query: 84 AD-LQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQE-LKKECAGYRERL---KNIKAA 138
D + L K L + ++ +Q + + ++QE L++E ER K+I +
Sbjct: 366 EDKAKKLAEKDKELRLEKEARRQLVDEVMCTRKLQVQEKLQREAKEQEERAMEQKHINES 425
Query: 139 TNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFE 188
+ EEKE R RQ+ +E+RK+ +M E + K++ FE
Sbjct: 426 LKELNCEEKENFAR-RQRLAQEYRKQLQMQIAYQQQSQEAEKEEKRREFE 474
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 37.0 bits (84), Expect = 0.012
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 18 RYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQ 77
R QE R Y +D LQ+E EQL ++ + K ++ +++ Y +++
Sbjct: 1011 RRRQEWERQYRKKD---ELQQEE-----------EQLLREEREKRRLQERERQYREEEE- 1055
Query: 78 FDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKA 137
+ + Q+L + T + Q L++ R E Q+E Q L++E R + + +
Sbjct: 1056 ---LQQEEEQLLGEE--RETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQC 1110
Query: 138 ATNHVTPEEKEQVYRE------RQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVG 191
+E+EQ+ RE RQ+ +++R+ + + E + E K ++Q E
Sbjct: 1111 REEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQY 1170
Query: 192 IETDE 196
E +E
Sbjct: 1171 REEEE 1175
Score = 33.9 bits (76), Expect = 0.099
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 105 QSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYC------ 158
QSC+ E E + ++L++ RE L+ + EEK+Q RERQ
Sbjct: 194 QSCKGHETEEFPDEEQLRR-----RELLELRRKGR-----EEKQQQRRERQDRVFQEEEE 243
Query: 159 KEWRKRKRMATELSDAILEGYPKSKKQFFEE 189
KEWRKR+ + + + + E P+ +++ EE
Sbjct: 244 KEWRKRETVLRKEEEKLQEEEPQRQRELQEE 274
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 101 QSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRE------R 154
Q ++ R + QKE Q L +E R + + K +E+EQ+ RE R
Sbjct: 954 QERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRR 1013
Query: 155 QKYCKEWRKRKRMATELSDAILEGYPKSK-----KQFFEEVGIETDED 197
Q++ +++RK+ + E + E K + +Q+ EE ++ +E+
Sbjct: 1014 QEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEE 1061
Score = 30.4 bits (67), Expect = 1.1
Identities = 31/159 (19%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 18 RYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQ 77
R LQE+ R Y ++ + E LG+ + ++L +Q + +E++ +++ ++ +
Sbjct: 1041 RRLQERERQYREEEELQQ-EEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPE 1099
Query: 78 FDMVSDADLQVLDGKIVALTAKV-----------QSLQQSCRYMEAEMQKEIQELKKECA 126
+ + Q + + + + Q L++ R E Q+E Q L++E
Sbjct: 1100 KRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPE 1159
Query: 127 GYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRK 165
R + + +E+EQ+ RE Q+ ++ R+R+
Sbjct: 1160 KRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQ 1198
Score = 30.0 bits (66), Expect = 1.4
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 102 SLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKA-ATNHVTPEEKEQVYRE------R 154
+LQ+ R + +Q+E +EL++E R R + + +E+EQ+ RE R
Sbjct: 894 ALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRR 953
Query: 155 QKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 196
Q+ +++RK K++ + + E K ++Q E+ E +E
Sbjct: 954 QERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEE 995
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 36.6 bits (83), Expect = 0.015
Identities = 34/174 (19%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 20 LQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFD 79
++EQ Q+ G ++ + G + + EQ Q G+ +E+M G+Q+ Q++
Sbjct: 166 VREQEGQVREQE--GQVREQEGQVREQEGQMGEQEGQMGEQEEQM-GEQEEQMQKQEEQM 222
Query: 80 MVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRER----LKNI 135
+ ++ + ++ +VQ ++ + E +M+K+ ++++++ RE+ LK
Sbjct: 223 GEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQK 282
Query: 136 KAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEE 189
+ E+E+ RE+++ +E ++ R E E K ++Q +E+
Sbjct: 283 EQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQ 336
>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
sapiens]
Length = 1478
Score = 36.2 bits (82), Expect = 0.020
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 4 GRAEAAAGAAGILLRYLQEQNRPY-----SSQDVFGNLQREH-GLGKAVVVKTLEQLAQQ 57
G E AG G L E+N S Q+ +G + E GL +A + T Q+
Sbjct: 551 GMLERLAGPPGPELPVAGEKNEALVPVNSSLQEAWGKPEEEQRGLQEAQLDDTK---VQE 607
Query: 58 GKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKE 117
G +E++ +Q +++ ++V Q+L+GK+ AL A Q+LQQ E+ +Q
Sbjct: 608 GSQEEEL--RQANRELEKELQNVVGRN--QLLEGKLQALQADYQALQQ----RESAIQGS 659
Query: 118 IQELKKECAGYRERLKNIKAATNHVTP---------EEKEQVYRERQKYCKEWRKRKRMA 168
+ L+ E A R ++A+ V EKE + + ++ C++ R+
Sbjct: 660 LASLEAEQASIRHLGDQMEASLLAVRKAKEAMKAQMAEKEAILQSKEGECQQLREEVEQC 719
Query: 169 TELSDA 174
+L++A
Sbjct: 720 QQLAEA 725
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 35.8 bits (81), Expect = 0.026
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 24 NRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSD 83
N+ +SQ V +L +E L K ++ QL + KEK Y + I D S
Sbjct: 536 NKYNTSQQVIQDLNKEIALQKESLMSLQAQL-DKALQKEKHYLQTTITKEAYDALSRKSA 594
Query: 84 A---DLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNI 135
A DL K+ +T++ +SLQQS + Q++ +L++E Y ER+K +
Sbjct: 595 ACQDDLTQALEKLNHVTSETKSLQQSL----TQTQEKKAQLEEEIIAYEERMKKL 645
Score = 30.0 bits (66), Expect = 1.4
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 43 GKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQF--DMVSDADLQVLDGKIVALTAKV 100
G ++ LEQ A+Q K+ + G Q +Q ++ + + D + T
Sbjct: 737 GNDQIMTNLEQWAKQQKVANEKLGNQ---LREQVKYIAKLSGEKDREPTRASSPNTTRPS 793
Query: 101 QSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 154
+ +Q+E ++LKKE + + +N + T + P E RE+
Sbjct: 794 SPSHSHLHSVMVHLQQENKKLKKEIEEKKMKAENTRLCTKALGPSRTESTQREK 847
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 35.8 bits (81), Expect = 0.026
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 24 NRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSD 83
N+ +SQ V +L +E L K ++ QL + KEK Y + I D S
Sbjct: 681 NKYNTSQQVIQDLNKEIALQKESLMSLQAQL-DKALQKEKHYLQTTITKEAYDALSRKSA 739
Query: 84 A---DLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNI 135
A DL K+ +T++ +SLQQS + Q++ +L++E Y ER+K +
Sbjct: 740 ACQDDLTQALEKLNHVTSETKSLQQSL----TQTQEKKAQLEEEIIAYEERMKKL 790
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 21/112 (18%)
Query: 43 GKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQS 102
G ++ LEQ A+Q K+ + G Q ++Q V AK+
Sbjct: 882 GNDQIMTNLEQWAKQQKVANEKLGNQL-----REQ----------------VKYIAKLSG 920
Query: 103 LQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 154
+ + +Q+E ++LKKE + + +N + T + P E RE+
Sbjct: 921 EKDHLHSVMVHLQQENKKLKKEIEEKKMKAENTRLCTKALGPSRTESTQREK 972
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 35.8 bits (81), Expect = 0.026
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 51 LEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYM 110
L L K E+ KQ+ + ++ D+D Q L K LT ++Q LQ+
Sbjct: 1498 LRSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSKKKEKLTEELQKLQKDIEMA 1557
Query: 111 EAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQ 155
E +Q LK+ + + ++ + VT +++E +RQ
Sbjct: 1558 ERNEDHHLQVLKESEVLLQAKRAELEKLKSQVTSQQQEMAVLDRQ 1602
Score = 32.7 bits (73), Expect = 0.22
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 77 QFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIK 136
Q +S+A +L ++ V L+Q +E +M+K+ K+E AG ++ +K+++
Sbjct: 482 QLKKISEAGKDLLYKQLSGRLQLVNKLRQEALDLELQMEKQ----KQEIAGKQKEIKDLQ 537
Query: 137 AATNHVTPEEKEQVYRERQKYCKE 160
A + + ++ + + + QK KE
Sbjct: 538 IAIDSLDSKDPKHSHMKAQKSGKE 561
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 35.4 bits (80), Expect = 0.034
Identities = 29/135 (21%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 56 QQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQ 115
Q+ K +EKM+ ++K +QD+ + ++ + KI L +Q ++ R +E +MQ
Sbjct: 400 QEEKRQEKMWRQEK-KMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQ 458
Query: 116 KEIQELKKECAGYRERLKNIKAATNHVTPEEK-----EQVYRERQKYCKEWRKRKRMATE 170
+E ++++++ + + + I+ +EK E+++ + +K WR+ ++M E
Sbjct: 459 EEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKM---WRQEEKM-WE 514
Query: 171 LSDAILEGYPKSKKQ 185
+ + E K ++Q
Sbjct: 515 QEEKMQEQEEKMQRQ 529
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/114 (18%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 56 QQGKIKEK--MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAE 113
Q+ KI+E+ +Q++ +Q++ + + + KI K+ ++ R E +
Sbjct: 302 QEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEK 361
Query: 114 MQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRM 167
++++ +++ ++ RE+ + I+ + +E++ +E ++ K WR+ K+M
Sbjct: 362 IREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKM 415
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 35.4 bits (80), Expect = 0.034
Identities = 29/135 (21%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 56 QQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQ 115
Q+ K +EKM+ ++K +QD+ + ++ + KI L +Q ++ R +E +MQ
Sbjct: 400 QEEKRQEKMWRQEK-KMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQ 458
Query: 116 KEIQELKKECAGYRERLKNIKAATNHVTPEEK-----EQVYRERQKYCKEWRKRKRMATE 170
+E ++++++ + + + I+ +EK E+++ + +K WR+ ++M E
Sbjct: 459 EEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKM---WRQEEKM-WE 514
Query: 171 LSDAILEGYPKSKKQ 185
+ + E K ++Q
Sbjct: 515 QEEKMQEQEEKMQRQ 529
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/114 (18%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 56 QQGKIKEK--MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAE 113
Q+ KI+E+ +Q++ +Q++ + + + KI K+ ++ R E +
Sbjct: 302 QEEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEK 361
Query: 114 MQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRM 167
++++ +++ ++ RE+ + I+ + +E++ +E ++ K WR+ K+M
Sbjct: 362 IREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKM 415
>gi|75677351 suppressor of defective silencing 3 [Homo sapiens]
Length = 328
Score = 35.4 bits (80), Expect = 0.034
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 73 ADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERL 132
A D+ D V + Q+ K+ +L ++Q LQ E +Q+ + +KK Y+ER+
Sbjct: 58 AKHDEEDYVEMKE-QMYQDKLASLKRQLQQLQ------EGTLQEYQKRMKKLDQQYKERI 110
Query: 133 KNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEE 189
+N + T + + +E++ KE+ +K EL + ++ + KK E
Sbjct: 111 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKK---VELKENLIAELEEKKKMIENE 164
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 35.4 bits (80), Expect = 0.034
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 76 DQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKE-----IQELKKECAGYRE 130
+Q +L +L + L A++Q QQ Y + QK+ +QE + + E
Sbjct: 293 EQIQTAKTQELNMLREQTTGLAAELQ--QQQAEYEDLMGQKDDLNSQLQESLRANSRLLE 350
Query: 131 RLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEV 190
+L+ I +EKEQ+ +E Q+ K KRK M EL+ L+ K Q EE+
Sbjct: 351 QLQEIG--------QEKEQLTQELQEARKSAEKRKAMLDELAMETLQ----EKSQHKEEL 398
Query: 191 G 191
G
Sbjct: 399 G 399
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 35.4 bits (80), Expect = 0.034
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 76 DQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKE-----IQELKKECAGYRE 130
+Q +L +L + L A++Q QQ Y + QK+ +QE + + E
Sbjct: 346 EQIQTAKTQELNMLREQTTGLAAELQ--QQQAEYEDLMGQKDDLNSQLQESLRANSRLLE 403
Query: 131 RLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEV 190
+L+ I +EKEQ+ +E Q+ K KRK M EL+ L+ K Q EE+
Sbjct: 404 QLQEIG--------QEKEQLTQELQEARKSAEKRKAMLDELAMETLQ----EKSQHKEEL 451
Query: 191 G 191
G
Sbjct: 452 G 452
Score = 27.3 bits (59), Expect = 9.3
Identities = 15/81 (18%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 95 ALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRER 154
A T ++++LQQ+ E+Q ++ + + RLK + + E++E + + R
Sbjct: 496 ARTRELETLQQTVE----ELQAQVHSMDGAKGWFERRLKEAEESLQQQQQEQEEALKQCR 551
Query: 155 QKYCKEWRKRKRMATELSDAI 175
+++ E + ++ ++ D +
Sbjct: 552 EQHAAELKGKEEELQDVRDQL 572
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 35.0 bits (79), Expect = 0.045
Identities = 21/118 (17%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 56 QQGKIKE--KMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAE 113
Q+ KI+E K +Q+ +Q++ + + +GK+ AK+Q ++ R E +
Sbjct: 437 QEEKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEK 496
Query: 114 MQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATEL 171
++++ ++++++ RE+ + E++E+++ + +K C++ K + ++
Sbjct: 497 IREQEKKIREQEEKIREQ--------EEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKM 546
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 35.0 bits (79), Expect = 0.045
Identities = 34/161 (21%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 7 EAAAGAAGILLR---YLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEK 63
E + G++L+ Y+++Q S + + +L R L + ++LE+ Q +K
Sbjct: 2534 ELLSALQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK 2593
Query: 64 MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKK 123
+Q Y ++ + + +A + L + L + + +QQ + +++KE +EL++
Sbjct: 2594 ---QQAQYLEEKRRREREWEARERELREREALLAQREEEVQQG----QQDLEKEREELQQ 2646
Query: 124 ECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKR 164
+ Y+ L+ ++AA + E+EQ+ RE ++ + +R
Sbjct: 2647 KKGTYQYDLERLRAAQKQL-EREQEQLRREAERLSQRQTER 2686
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/107 (20%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 80 MVSDADLQVLDGKIV-ALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAA 138
+V D + D K+V + A +SL + +E E Q+ +++ +++ A +++
Sbjct: 2542 VVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQKQQAQYL-- 2599
Query: 139 TNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQ 185
EEK + RE + +E R+R+ + + + + +G +K+
Sbjct: 2600 ------EEKRRREREWEARERELREREALLAQREEEVQQGQQDLEKE 2640
>gi|21493031 A-kinase anchor protein 13 isoform 3 [Homo sapiens]
Length = 1058
Score = 35.0 bits (79), Expect = 0.045
Identities = 34/161 (21%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 7 EAAAGAAGILLR---YLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEK 63
E + G++L+ Y+++Q S + + +L R L + ++LE+ Q +K
Sbjct: 775 ELLSALQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK 834
Query: 64 MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKK 123
+Q Y ++ + + +A + L + L + + +QQ + +++KE +EL++
Sbjct: 835 ---QQAQYLEEKRRREREWEARERELREREALLAQREEEVQQG----QQDLEKEREELQQ 887
Query: 124 ECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKR 164
+ Y+ L+ ++AA + E+EQ+ RE ++ + +R
Sbjct: 888 KKGTYQYDLERLRAAQKQL-EREQEQLRREAERLSQRQTER 927
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/107 (20%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 80 MVSDADLQVLDGKIV-ALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAA 138
+V D + D K+V + A +SL + +E E Q+ +++ +++ A +++
Sbjct: 783 VVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQKQQAQYL-- 840
Query: 139 TNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQ 185
EEK + RE + +E R+R+ + + + + +G +K+
Sbjct: 841 ------EEKRRREREWEARERELREREALLAQREEEVQQGQQDLEKE 881
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 35.0 bits (79), Expect = 0.045
Identities = 34/161 (21%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 7 EAAAGAAGILLR---YLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEK 63
E + G++L+ Y+++Q S + + +L R L + ++LE+ Q +K
Sbjct: 2530 ELLSALQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQK 2589
Query: 64 MYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKK 123
+Q Y ++ + + +A + L + L + + +QQ + +++KE +EL++
Sbjct: 2590 ---QQAQYLEEKRRREREWEARERELREREALLAQREEEVQQG----QQDLEKEREELQQ 2642
Query: 124 ECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKR 164
+ Y+ L+ ++AA + E+EQ+ RE ++ + +R
Sbjct: 2643 KKGTYQYDLERLRAAQKQL-EREQEQLRREAERLSQRQTER 2682
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/107 (20%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 80 MVSDADLQVLDGKIV-ALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAA 138
+V D + D K+V + A +SL + +E E Q+ +++ +++ A +++
Sbjct: 2538 VVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLANLQKQQAQYL-- 2595
Query: 139 TNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQ 185
EEK + RE + +E R+R+ + + + + +G +K+
Sbjct: 2596 ------EEKRRREREWEARERELREREALLAQREEEVQQGQQDLEKE 2636
>gi|95089461 discs large homolog 5 [Homo sapiens]
Length = 1919
Score = 34.3 bits (77), Expect = 0.076
Identities = 36/183 (19%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 36 LQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDAD-----LQVLD 90
LQ E + VKT ++ + + ++ +Y + K+ +++DQ ++S+ D +++ +
Sbjct: 400 LQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQ--VISELDKLQTEVELAE 457
Query: 91 GKIVALTAKVQSLQQSCRYME----------AEMQKEIQELKKECAGYRERLKNIKAATN 140
K+ + T++ ++ + + KE++ L+K+C + LK +
Sbjct: 458 SKLKSSTSEKKAANEEMEALRQIKDTVTMDAGRANKEVEILRKQCKALCQELKEALQEAD 517
Query: 141 HVTPEEKEQVYRERQKYCKE-----------WRKRKRMATELSDAI--LEGYPKSKKQFF 187
V ++ ++ER K E R+R R +EL++A+ L+ K K
Sbjct: 518 -VAKCRRDWAFQERDKIVAERDSIRTLCDNLRRERDRAVSELAEALRSLDDTRKQKNDVS 576
Query: 188 EEV 190
E+
Sbjct: 577 REL 579
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 34.3 bits (77), Expect = 0.076
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 84 ADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVT 143
A+ +L+GK+ ++ +Q +E+E+Q+E +EL+ E + L+ ++ +
Sbjct: 703 AEYTILEGKLQKTLIDLEKREQQLASVESELQREKKELQSE---RQRNLQELQDSIRRAK 759
Query: 144 PEEKEQVYRERQKYCKEWRKRKRMATELSDA 174
+ QV ER K + + R+ +L+DA
Sbjct: 760 EDCIHQVELERLKIKQLEEDKHRLQQQLNDA 790
>gi|229577185 epidermal growth factor receptor pathway substrate 15
isoform B [Homo sapiens]
Length = 582
Score = 33.9 bits (76), Expect = 0.099
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 92 KIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVY 151
K+ A +VQ L +A+++++++E++K+CA + + ++KA + E + Y
Sbjct: 72 KLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAEL--TSQESQISTY 129
Query: 152 RERQKYCKEWRKRKRMAT-ELSDAILEG 178
E +E R + T EL +++ G
Sbjct: 130 EEELAKAREELSRLQQETAELEESVESG 157
>gi|4503593 epidermal growth factor receptor pathway substrate 15
isoform A [Homo sapiens]
Length = 896
Score = 33.9 bits (76), Expect = 0.099
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 92 KIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVY 151
K+ A +VQ L +A+++++++E++K+CA + + ++KA + E + Y
Sbjct: 386 KLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAEL--TSQESQISTY 443
Query: 152 RERQKYCKEWRKRKRMAT-ELSDAILEG 178
E +E R + T EL +++ G
Sbjct: 444 EEELAKAREELSRLQQETAELEESVESG 471
>gi|153791352 prostate, ovary, testis expressed protein on
chromosome 2 [Homo sapiens]
Length = 1075
Score = 33.9 bits (76), Expect = 0.099
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
Query: 11 GAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKI 70
G+A I+ L EQN SSQD+ G RE+ + V + QL K K+ + +
Sbjct: 316 GSASIV-SLLLEQNIDVSSQDLSGQTAREYAVSSHHHV--ICQLLSDYKEKQMLKISSEN 372
Query: 71 YFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAEMQKEIQELKKECAGYRE 130
+QD + S+ + Q G + K+ + + + E+++E+++ + G E
Sbjct: 373 SNPEQD-LKLTSEEESQRFKGSENSQPEKMSQEPEINKDGDREVEEEMKKHESNNVGLLE 431
Query: 131 RLKNIKAA---TNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPK 181
L N A N + P+ K + +Q E + R+ LSD + PK
Sbjct: 432 NLTNGVTAGNGDNGLIPQRKSRTPENQQFPDNESEEYHRICELLSDYKEKQMPK 485
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 33.9 bits (76), Expect = 0.099
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 99 KVQSLQQSCRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYC 158
+++ QQ R +++++++ELK + + +E EKEQ+ ERQ+
Sbjct: 255 QLRDAQQDARDKMEDIERQVRELKTKISAMKE---------------EKEQLSAERQEQI 299
Query: 159 KEWRKRKRMATELSDAILEGYPKSKKQFFEE 189
K+ K + A +L D L G + +K+ +E
Sbjct: 300 KQRTKLELKAKDLQDE-LAGNSEQRKRLLKE 329
>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.099
Identities = 32/162 (19%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 27 YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
+ +Q+ +LQ+++ + KT + ++ +++E++ ++ +++ +
Sbjct: 360 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 415
Query: 87 QVLDGKIVALTAKVQSLQQSCRYMEAE----------MQKEIQELKKECAGYRERLKNIK 136
Q L G+I AL ++ L + C +E E +Q+E+Q K + R L+ ++
Sbjct: 416 QELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVE 475
Query: 137 AATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 177
+ + E+ E QK C+E + + M LS + L+
Sbjct: 476 GLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 515
>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.099
Identities = 32/162 (19%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 27 YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
+ +Q+ +LQ+++ + KT + ++ +++E++ ++ +++ +
Sbjct: 360 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 415
Query: 87 QVLDGKIVALTAKVQSLQQSCRYMEAE----------MQKEIQELKKECAGYRERLKNIK 136
Q L G+I AL ++ L + C +E E +Q+E+Q K + R L+ ++
Sbjct: 416 QELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVE 475
Query: 137 AATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 177
+ + E+ E QK C+E + + M LS + L+
Sbjct: 476 GLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 515
>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
sapiens]
Length = 708
Score = 33.9 bits (76), Expect = 0.099
Identities = 32/162 (19%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 27 YSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADL 86
+ +Q+ +LQ+++ + KT + ++ +++E++ ++ +++ +
Sbjct: 468 HKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQ---- 523
Query: 87 QVLDGKIVALTAKVQSLQQSCRYMEAE----------MQKEIQELKKECAGYRERLKNIK 136
Q L G+I AL ++ L + C +E E +Q+E+Q K + R L+ ++
Sbjct: 524 QELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVE 583
Query: 137 AATNHVTPEEKEQVYRERQKYCKEWRKR-KRMATELSDAILE 177
+ + E+ E QK C+E + + M LS + L+
Sbjct: 584 GLKKELRELQDEKA--ELQKICEEQEQALQEMGLHLSQSKLK 623
>gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo
sapiens]
Length = 369
Score = 33.5 bits (75), Expect = 0.13
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 119 QELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEG 178
Q K G R R +I+ + E+K+ VY E+++ E KR R L+DA +EG
Sbjct: 47 QSHSKTLWGARGRGPSIRRQREFMPEEKKDTVYWEKRRKNNEAAKRSREKRRLNDAAIEG 106
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 33.5 bits (75), Expect = 0.13
Identities = 25/149 (16%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 48 VKTLEQLAQQGKIKEKMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSC 107
++ E+ + +KEK+ ++ +Q+Q + D L+ ++ L +++ ++ C
Sbjct: 1317 IQQYERACKDLNVKEKIIEDMRMTLEEQEQTQVEQDQVLEAKLEEVERLATELEKWKEKC 1376
Query: 108 RYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRM 167
+E + + + + +L N++ +E EQ Y + K+W + K M
Sbjct: 1377 NDLETKNNQRSNKEHENNTDVLGKLTNLQDEL-----QESEQKYNADR---KKWLEEKMM 1428
Query: 168 -------ATELSDAILEGYPKSKKQFFEE 189
A + + ++ Y + +++FF++
Sbjct: 1429 LITQAKEAENIRNKEMKKYAEDRERFFKQ 1457
Score = 29.6 bits (65), Expect = 1.9
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 28/128 (21%)
Query: 75 QDQFDMVSDADLQVLDGK--IVALTAKVQSLQQSCRYMEAEMQ---KEIQELKKECAGYR 129
QD D +++ L K I LT +Q ++ + E E + +E ++LK+E +
Sbjct: 1169 QDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQETEKLKEELSASS 1228
Query: 130 ERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEE 189
R +N+KA + KE+ Y + + +L+DA K KQ +E
Sbjct: 1229 ARTQNLKADL-----QRKEEDYAD-------------LKEKLTDA-----KKQIKQVQKE 1265
Query: 190 VGIETDED 197
V + DED
Sbjct: 1266 VSVMRDED 1273
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 33.1 bits (74), Expect = 0.17
Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 52 EQLAQQGKIKE-----KMYGKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQS 106
+QLA + ++ E +K+ +Q Q + A+ + L + LTAK Q L++
Sbjct: 860 KQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRAR---LTAKKQELEEI 916
Query: 107 CRYMEAEMQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRK 165
C +EA +++E + + A ++ +NI+ + EE + + +K E + +K
Sbjct: 917 CHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKK 975
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,132,958
Number of Sequences: 37866
Number of extensions: 296757
Number of successful extensions: 2008
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 1653
Number of HSP's gapped (non-prelim): 555
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.