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Search of human proteins with 31377841
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo
sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens] 961 0.0
gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens] 961 0.0
gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens] 764 0.0
gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens] 661 0.0
gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens] 661 0.0
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 427 e-120
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 424 e-119
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 42 0.002
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 42 0.002
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 38 0.023
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 37 0.039
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 36 0.066
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 36 0.066
gi|168823443 RAD54-like 2 [Homo sapiens] 36 0.086
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens] 36 0.086
gi|18426913 drebrin 1 isoform b [Homo sapiens] 35 0.15
gi|18426915 drebrin 1 isoform a [Homo sapiens] 35 0.15
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 35 0.15
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 35 0.15
gi|115430209 phosphatase and actin regulator 4 isoform 2 [Homo s... 35 0.15
gi|115430211 phosphatase and actin regulator 4 isoform 1 [Homo s... 35 0.15
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho... 35 0.19
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 35 0.19
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 34 0.25
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 34 0.25
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 34 0.33
gi|62953127 polyhomeotic 1-like [Homo sapiens] 34 0.33
gi|124244056 family with sequence similarity 123B [Homo sapiens] 33 0.43
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 33 0.43
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 33 0.43
>gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]
Length = 517
Score = 961 bits (2483), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS 60
MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS
Sbjct: 49 MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS 108
Query: 61 QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP 120
QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP
Sbjct: 109 QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP 168
Query: 121 WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ 180
WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ
Sbjct: 169 WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ 228
Query: 181 EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 240
EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW
Sbjct: 229 EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 288
Query: 241 LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC 300
LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC
Sbjct: 289 LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC 348
Query: 301 ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC 360
ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC
Sbjct: 349 ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC 408
Query: 361 DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ 420
DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ
Sbjct: 409 DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ 468
Query: 421 QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL 469
QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 469 QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL 517
>gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]
Length = 469
Score = 961 bits (2483), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS 60
MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS
Sbjct: 1 MEYHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPS 60
Query: 61 QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP 120
QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP
Sbjct: 61 QCGDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIP 120
Query: 121 WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ 180
WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ
Sbjct: 121 WKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQ 180
Query: 181 EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 240
EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW
Sbjct: 181 EKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGW 240
Query: 241 LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC 300
LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC
Sbjct: 241 LVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLC 300
Query: 301 ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC 360
ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC
Sbjct: 301 ELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFC 360
Query: 361 DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ 420
DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ
Sbjct: 361 DSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQ 420
Query: 421 QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL 469
QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 421 QEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGERRQRPKHESDCILL 469
>gi|253795490 hypothetical protein LOC55793 isoform 4 [Homo sapiens]
Length = 374
Score = 764 bits (1974), Expect = 0.0
Identities = 374/374 (100%), Positives = 374/374 (100%)
Query: 96 MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLP 155
MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLP
Sbjct: 1 MPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLP 60
Query: 156 PQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFT 215
PQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFT
Sbjct: 61 PQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFT 120
Query: 216 GVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTN 275
GVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTN
Sbjct: 121 GVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTN 180
Query: 276 LVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVT 335
LVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVT
Sbjct: 181 LVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVT 240
Query: 336 DQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLI 395
DQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLI
Sbjct: 241 DQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLI 300
Query: 396 ALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGE 455
ALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGE
Sbjct: 301 ALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSLQGRGATSGRPAGE 360
Query: 456 RRQRPKHESDCILL 469
RRQRPKHESDCILL
Sbjct: 361 RRQRPKHESDCILL 374
>gi|253795492 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
Length = 327
Score = 661 bits (1705), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 143 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 202
MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 1 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
Query: 203 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 262
KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 61 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
Query: 263 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 322
ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
Query: 323 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 382
MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
Query: 383 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 442
PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
Query: 443 QGRGATSGRPAGERRQRPKHESDCILL 469
QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
>gi|94158609 hypothetical protein LOC55793 isoform 2 [Homo sapiens]
Length = 327
Score = 661 bits (1705), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 143 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 202
MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP
Sbjct: 1 MNILFLQWKVKLPPQKEVITSDELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLP 60
Query: 203 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 262
KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV
Sbjct: 61 KLATGLDVNVRFTGVSDFEYTPECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLV 120
Query: 263 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 322
ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST
Sbjct: 121 ERIITCKHSSDTNLVTEGLIAEQFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFST 180
Query: 323 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 382
MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS
Sbjct: 181 MTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGS 240
Query: 383 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 442
PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL
Sbjct: 241 PEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 300
Query: 443 QGRGATSGRPAGERRQRPKHESDCILL 469
QGRGATSGRPAGERRQRPKHESDCILL
Sbjct: 301 QGRGATSGRPAGERRQRPKHESDCILL 327
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 427 bits (1099), Expect = e-120
Identities = 222/381 (58%), Positives = 275/381 (72%), Gaps = 26/381 (6%)
Query: 105 RTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSD 164
+ R P Y +KWI WK E TPIITQ+ NGPCPLLAI+N+L L WKVKLPP E+IT++
Sbjct: 234 KERFPGQSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEIITAE 293
Query: 165 ELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTP 224
+LM +LG+ +L KP+E SE +LN++QN+ DAM +L KL TGLDVNVRFTGV FEYTP
Sbjct: 294 QLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTP 353
Query: 225 ECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAE 284
EC VFDLL IPLYHGWLVDPQ + V+AVG SYNQLVE+II+CK S ++ LV+EG +AE
Sbjct: 354 ECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGFVAE 413
Query: 285 QFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQ 344
QFL TA QLTYHGLCELT+ +EGEL VFFRNNHFSTMTK+K LYLLVTDQGFL EE+
Sbjct: 414 QFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLTEEK 473
Query: 345 VVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQ- 403
VVWESLHNVDGD FCDS+FHL P ++ + +Q Q+DQDYL+ALSLQQ+Q
Sbjct: 474 VVWESLHNVDGDGNFCDSEFHLR------PPSDPETVYKGQQDQIDQDYLMALSLQQEQQ 527
Query: 404 ------PRGPLGLTDLELAQQLQQEE-------YQQQQAAQPVRMRTRVLSLQGRGA--- 447
+ P G++DLELA++LQ+EE YQ+Q+ A + QG+ A
Sbjct: 528 SQEINWEQIPEGISDLELAKKLQEEEDRRASQYYQEQEQAAAAAAAASTQAQQGQPAQAS 587
Query: 448 -TSGRPAG--ERRQRPKHESD 465
+SGR +G ER+++ E D
Sbjct: 588 PSSGRQSGNSERKRKEPREKD 608
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 424 bits (1091), Expect = e-119
Identities = 221/380 (58%), Positives = 272/380 (71%), Gaps = 25/380 (6%)
Query: 105 RTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCPLLAIMNILFLQWKVKLPPQKEVITSD 164
+ R P Y +KWI WK E TPIITQ+ NGPCPLLAI+N+L L WKVKLPP E+IT++
Sbjct: 234 KERFPGQSVYHIKWIQWKEENTPIITQNENGPCPLLAILNVLLLAWKVKLPPMMEIITAE 293
Query: 165 ELMAHLGNCLLSIKPQEKSEGLQLNFQQNVDDAMTVLPKLATGLDVNVRFTGVSDFEYTP 224
+LM +LG+ +L KP+E SE +LN++QN+ DAM +L KL TGLDVNVRFTGV FEYTP
Sbjct: 294 QLMEYLGDYMLDAKPKEISEIQRLNYEQNMSDAMAILHKLQTGLDVNVRFTGVRVFEYTP 353
Query: 225 ECSVFDLLGIPLYHGWLVDPQSPEAVRAVGKLSYNQLVERIITCKHSSDTNLVTEGLIAE 284
EC VFDLL IPLYHGWLVDPQ + V+AVG SYNQLVE+II+CK S ++ LV+EG +AE
Sbjct: 354 ECIVFDLLDIPLYHGWLVDPQIDDIVKAVGNCSYNQLVEKIISCKQSDNSELVSEGFVAE 413
Query: 285 QFLETTAAQLTYHGLCELTAAAKEGELSVFFRNNHFSTMTKHKSHLYLLVTDQGFLQEEQ 344
QFL TA QLTYHGLCELT+ +EGEL VFFRNNHFSTMTK+K LYLLVTDQGFL EE+
Sbjct: 414 QFLNNTATQLTYHGLCELTSTVQEGELCVFFRNNHFSTMTKYKGQLYLLVTDQGFLTEEK 473
Query: 345 VVWESLHNVDGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALSLQQQQ- 403
VVWESLHNVDGD FCDS+FHL P ++ + +Q Q+DQDYL+ALSLQQ+Q
Sbjct: 474 VVWESLHNVDGDGNFCDSEFHLR------PPSDPETVYKGQQDQIDQDYLMALSLQQEQQ 527
Query: 404 ------PRGPLGLTDLELAQQLQQEE------YQQQQAAQPVRMRTRVLSLQGRGA---- 447
+ P G++DLELA++LQ+EE Y Q+Q QG+ A
Sbjct: 528 SQEINWEQIPEGISDLELAKKLQEEEDRRASQYYQEQEQAAAAAAAASTQAQGQPAQASP 587
Query: 448 TSGRPAG--ERRQRPKHESD 465
+SGR +G ER+++ E D
Sbjct: 588 SSGRQSGNSERKRKEPREKD 607
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 334 VTDQGFLQE-EQVVWESLHNVDGDSCFCDS-----DFHLSHSLGKGPGAEGGSGSPEKQL 387
V D+ F+Q ++++ E+L G+S HL L KGP GG G E
Sbjct: 1108 VEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESA- 1166
Query: 388 QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 442
D + + L ++ + + ++ ++ QL + QQQA Q RMR + L+L
Sbjct: 1167 ----DTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTL 1217
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 334 VTDQGFLQE-EQVVWESLHNVDGDSCFCDS-----DFHLSHSLGKGPGAEGGSGSPEKQL 387
V D+ F+Q ++++ E+L G+S HL L KGP GG G E
Sbjct: 1108 VEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAESA- 1166
Query: 388 QVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQQAAQPVRMRTRVLSL 442
D + + L ++ + + ++ ++ QL + QQQA Q RMR + L+L
Sbjct: 1167 ----DTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTL 1217
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.7 bits (86), Expect = 0.023
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 374 PGAEGGSGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQEEYQQQ-QAAQP 432
PGA G G P +Q+ + Q +++ QQ +G +G + QQ QQ+++QQQ A
Sbjct: 3815 PGALGPQG-PHRQVLMTQSRVLSSPQLAQQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGL 3873
Query: 433 VRMRTRVLSLQGRGATSGRPAGERRQ 458
++ ++S G+ S +P G +Q
Sbjct: 3874 SHLQQSLMSHSGQPKLSAQPMGSLQQ 3899
Score = 34.7 bits (78), Expect = 0.19
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 365 HLSHSLGKGPGAEGGSGSPE---KQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQ 421
HL SL G S P +QLQ Q LQQQQ + L+ QQLQQ
Sbjct: 3875 HLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQ------QLQQQQQLQQ 3928
Query: 422 EEYQQQQAAQPVRMR 436
++ QQQQ Q ++ +
Sbjct: 3929 QQLQQQQQQQQLQQQ 3943
Score = 32.0 bits (71), Expect = 1.2
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 22 PENHEVLAGPDEHPQDTDARDADGEAREREPADQAL----LPSQCGDNLESPLPEASSAP 77
P L+ P E + ++ E P AL P L P E+ +P
Sbjct: 497 PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSP 556
Query: 78 PGPTLGTLPEVETIRACSMPQELPQSP 104
P L T P E R P+E P SP
Sbjct: 557 PPEELPTSPPPEASRLSPPPEESPMSP 583
Score = 30.0 bits (66), Expect = 4.7
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 368 HSLGKGP--GAEGG---SGSPEKQLQVDQDYLIALSLQQQQPRGPLGLTDLELAQQLQQE 422
HS G G G GG + L D L LQ QQ R ++LAQ+LQQ+
Sbjct: 3685 HSGGAGSLAGPSGGFFPGNLALRSLGPDSRLLQERQLQLQQQR-------MQLAQKLQQQ 3737
Query: 423 EYQQQQAAQPV-RMRTRVLSLQGRGATSGRPAGERRQ 458
+ QQQQ + ++ + QG G + + G + Q
Sbjct: 3738 QQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQ 3774
Score = 29.6 bits (65), Expect = 6.1
Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 6 PEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQCGDN 65
P P P + T+ PE + P+E P P + + P
Sbjct: 553 PLSPPPEELPTSPP--PEASRLSPPPEESPMSPP------------PEESPMSPPPEASR 598
Query: 66 LESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQ----PEPDFYCVKWIPW 121
L P E+ +PP P E R P++ P SP + P P+ + +P
Sbjct: 599 LFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPV 658
Query: 122 KGEQTPIITQSTNGPCP 138
+P +S P P
Sbjct: 659 VSRLSPPPEESPLSPPP 675
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 37.0 bits (84), Expect = 0.039
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 8 DPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQCGDNLE 67
D PG++ AE + E A P+ + +A +A+G+A+E E Q +++E
Sbjct: 1823 DQDPGQSDGAEGIEAPEAEGEAQPES--EGVEAPEAEGDAQEAEGEAQPE-----SEDVE 1875
Query: 68 SPLPEASSAPPGPTLGTLPEVE-TIRACSMPQELPQSPRTRQPEPDFYCVKWIPWKGEQT 126
+P E + P + T PE E ++ S E P++ + QPE + V+ + +GE
Sbjct: 1876 APEAEGEAQPESEDVET-PEAEWEVQPESEGAEAPEAEKEAQPETE--SVEALETEGEDE 1932
Query: 127 P 127
P
Sbjct: 1933 P 1933
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 5 QPE-DPAPGKAGTAEAVIPENHEVLAGPDEHPQ--DTDARDADGEAR---EREPADQALL 58
QPE D EA E A + HP+ D DA++A+GEA+ E A +A
Sbjct: 2049 QPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEG 2108
Query: 59 PSQCGDNLESPLPEASSAPPGPTLGTLPEVE 89
+Q + +E+P E + P + PE E
Sbjct: 2109 EAQKAEGIEAPETEGEAQPESEGI-EAPEAE 2138
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 36.2 bits (82), Expect = 0.066
Identities = 34/109 (31%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 10 APGKAGTAEAVIPENHEVLAGPDEHPQDTD--ARDADGEAREREPADQALLPSQCGDNL- 66
A G A V P E + +HPQ A +A+G R P PSQ G L
Sbjct: 751 AQGLAPAPCLVTPSWTETASSGGDHPQAEPKLATEAEGTTGPRLPLPSVPSPSQEGAPLP 810
Query: 67 --ESPLPEASSA-PPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPD 112
E+ P+A A P PT T EV I+ S SP P +
Sbjct: 811 SEEASAPDAPDALPDSPTPATGGEVSAIKLASALNGSSSSPEVEAPSSE 859
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.066
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 12/122 (9%)
Query: 31 PDEHPQDTDARDADGEAREREP-----ADQALLPSQCGDNLESPLPEASS------APPG 79
P P+ + +A G AR P A P L PLP +S +PPG
Sbjct: 146 PPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPG 205
Query: 80 P-TLGTLPEVETIRACSMPQELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGPCP 138
P T G LP V C+ P P P T P P + K + P+ P P
Sbjct: 206 PLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLP 265
Query: 139 LL 140
LL
Sbjct: 266 LL 267
>gi|168823443 RAD54-like 2 [Homo sapiens]
Length = 1467
Score = 35.8 bits (81), Expect = 0.086
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 4 HQPEDP-APGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQC 62
H P AP G A V P++ E+++ ++ AR E+R+ P+ A LP
Sbjct: 1151 HSASSPKAPDPEGLARPVSPDSPEIISELQQYADVAAAR----ESRQSSPSTNAALPGPP 1206
Query: 63 GDNLESPLPEASSAPPGPTLGTLPEV 88
++S SA PG LGT P +
Sbjct: 1207 AQLMDS------SAVPGTALGTEPRL 1226
>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
Length = 4861
Score = 35.8 bits (81), Expect = 0.086
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 41 RDADGEAREREPADQALLPSQCGDNLESPLPEASSAPPGPTLGTLP--EVETIRACSMPQ 98
++ D +A E +PA QA P + S SS+ T T P + ET+ A P
Sbjct: 2615 QEIDQQAEESDPAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPG 2674
Query: 99 ELPQSPRTRQPEPDFYCVKWIPWKGEQTPIITQSTNGP 136
+P S RQ + +P + QTP I+ P
Sbjct: 2675 VMPLS-LLRQMFSSYPTTTVLPTRRAQTPPISSLPTSP 2711
>gi|18426913 drebrin 1 isoform b [Homo sapiens]
Length = 651
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 3 YHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQC 62
+ Q E A AG+ + P NH P H D+ R A R P+D + +
Sbjct: 296 FKQQERVASASAGSCDVPSPFNHR----PGSH-LDSHRRMAPTPIPTRSPSDSSTASTPV 350
Query: 63 GDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP 111
+ +E L E +S+ P P +P P + T++P P
Sbjct: 351 AEQIERALDEVTSSQPPP---------------LPPPPPPAQETQEPSP 384
>gi|18426915 drebrin 1 isoform a [Homo sapiens]
Length = 649
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 3 YHQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQC 62
+ Q E A AG+ + P NH P H D+ R A R P+D + +
Sbjct: 294 FKQQERVASASAGSCDVPSPFNHR----PGSH-LDSHRRMAPTPIPTRSPSDSSTASTPV 348
Query: 63 GDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP 111
+ +E L E +S+ P P +P P + T++P P
Sbjct: 349 AEQIERALDEVTSSQPPP---------------LPPPPPPAQETQEPSP 382
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 35.0 bits (79), Expect = 0.15
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 22 PENHEVLAGPDEHPQDTDARDADGEAREREPADQALL-----PSQCGDNLESPLPEASSA 76
P V G D + ++D + REREP ALL + G P P +
Sbjct: 889 PRETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVASATPGPAAPLPSPTPGES 948
Query: 77 PPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP 111
PP +L PE ++ A +P L SP + P P
Sbjct: 949 PPASSL-PQPEPSSLPAQGVPTPLAPSPAMQPPVP 982
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 35.0 bits (79), Expect = 0.15
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 22 PENHEVLAGPDEHPQDTDARDADGEAREREPADQALL-----PSQCGDNLESPLPEASSA 76
P V G D + ++D + REREP ALL + G P P +
Sbjct: 971 PRETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVASATPGPAAPLPSPTPGES 1030
Query: 77 PPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP 111
PP +L PE ++ A +P L SP + P P
Sbjct: 1031 PPASSL-PQPEPSSLPAQGVPTPLAPSPAMQPPVP 1064
>gi|115430209 phosphatase and actin regulator 4 isoform 2 [Homo
sapiens]
Length = 712
Score = 35.0 bits (79), Expect = 0.15
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 8/147 (5%)
Query: 5 QPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQCGD 64
+P P P K G +P A + P D + E P PS
Sbjct: 299 KPSPPLPPKRGIPSTSVPTLESAAAITTKTPSDEREKSTCSMGSELLPMISPRSPSPPLP 358
Query: 65 NLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP-----DFYCVKWI 119
P P + P T +PE+E + + QE+PQ ++ P + I
Sbjct: 359 THIPPEPPRTPPFPAKTFQVVPEIEFPPSLDLHQEIPQQEDQKKEVPKRILDQNFGEPHI 418
Query: 120 PWKGEQTPI---ITQSTNGPCPLLAIM 143
P + P+ I Q+ P P+ I+
Sbjct: 419 PSRLPPLPLHIRIQQALTSPLPMTPIL 445
>gi|115430211 phosphatase and actin regulator 4 isoform 1 [Homo
sapiens]
Length = 702
Score = 35.0 bits (79), Expect = 0.15
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 8/147 (5%)
Query: 5 QPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEAREREPADQALLPSQCGD 64
+P P P K G +P A + P D + E P PS
Sbjct: 289 KPSPPLPPKRGIPSTSVPTLESAAAITTKTPSDEREKSTCSMGSELLPMISPRSPSPPLP 348
Query: 65 NLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEP-----DFYCVKWI 119
P P + P T +PE+E + + QE+PQ ++ P + I
Sbjct: 349 THIPPEPPRTPPFPAKTFQVVPEIEFPPSLDLHQEIPQQEDQKKEVPKRILDQNFGEPHI 408
Query: 120 PWKGEQTPI---ITQSTNGPCPLLAIM 143
P + P+ I Q+ P P+ I+
Sbjct: 409 PSRLPPLPLHIRIQQALTSPLPMTPIL 435
>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
sapiens]
Length = 1570
Score = 34.7 bits (78), Expect = 0.19
Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 4 HQPEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEA---------REREPAD 54
HQ G G A AV L+ EH +T R + GEA P
Sbjct: 1391 HQSVQTEDGTGGMARAVAKA---ALSPVQEH--ETGRRSSSGEAGTPLVPIVVEPARPGA 1445
Query: 55 QALLPSQCGDN---LESPLPEASSAPPGPT---LGTLPEVETIRACSMPQELPQSPRTRQ 108
+A++P G + L+ P P A S P P L VE S P+ P SP+
Sbjct: 1446 KAVVPQPLGADSKGLQEPAPLAPSVPEAPRGRERWVLEVVEERTTLSGPRSKPASPKL-S 1504
Query: 109 PEP 111
PEP
Sbjct: 1505 PEP 1507
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 34.7 bits (78), Expect = 0.19
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 51 EPADQALLPSQCGDNLESPLPEASSAPPGPTL----GTLPEVETIRACSMPQELPQSPRT 106
E A+ A CG SP P S++PPGPTL +L E + ++P +S R
Sbjct: 974 EKAEAAAGEESCG---ASPTPATSASPPGPTLKARFRSLLETAWLNGLALPTWGHKSSRP 1030
Query: 107 RQPEP 111
QP P
Sbjct: 1031 DQPSP 1035
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 34.3 bits (77), Expect = 0.25
Identities = 38/146 (26%), Positives = 53/146 (36%), Gaps = 27/146 (18%)
Query: 317 NNHFSTMTKHKSHLYLLVTDQGFLQEEQVVWESLHNVDGDSCFCDSDFH----------- 365
+NH+S +T S ++ G Q E+ V GD S+ H
Sbjct: 6 SNHYSLLTSSASIVHA-EPPGGMQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITA 64
Query: 366 LSHSLGKGPGAEGGSG---------------SPEKQLQVDQDYLIALSLQQQQPRGPLGL 410
LSH G G G GG G SP Q + ++ + + GP L
Sbjct: 65 LSHGGGGGGGGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRGDELHGPGAL 124
Query: 411 TDLELAQQLQQEEYQQQQAAQPVRMR 436
QQ QQ++ QQQQ Q + R
Sbjct: 125 QQQHQQQQQQQQQQQQQQQQQQQQQR 150
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 34.3 bits (77), Expect = 0.25
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 40 ARDADGEAREREPADQALLPSQCGDN-LESPLPEASSAPPGPTLGTLPEVETIRACSMPQ 98
AR+ + R + + L S+ G E P+P+AS PPGP T P + PQ
Sbjct: 520 AREVEERTRMNKQQNSPLAKSKPGSTGPEPPIPQASPGPPGPLSQTPPMQRPVE----PQ 575
Query: 99 ELPQSPRTRQP 109
E P QP
Sbjct: 576 EGPHKSLQDQP 586
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 33.9 bits (76), Expect = 0.33
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 49 EREPADQALLPSQCGDNLESPLP----EASSAPPGPTLGTLPEVETIRACSMPQELPQSP 104
+R+ A LP Q E+P P EASS PP P L + E+E + + P + SP
Sbjct: 395 DRKKASLVALPEQTASEEETPPPLLTKEASSPPPHPQLHSEEEIEPMEGPAPPVLIQLSP 454
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 33.9 bits (76), Expect = 0.33
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 384 EKQLQVDQDYLIALSLQQQQPRGPL--GLTDLELAQQLQQEEYQQQQAAQP 432
+KQ+ + Q I Q Q + L T L+LAQQ QQ++ QQQQ QP
Sbjct: 390 QKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQP 440
>gi|124244056 family with sequence similarity 123B [Homo sapiens]
Length = 1135
Score = 33.5 bits (75), Expect = 0.43
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 6 PEDPAPGKAGTAEAVIPENHEVLAGPDEHPQDTDARDADGEARERE---PADQALLPSQC 62
PE APG++G + P + + GP + Q ++ AR R+ P D+ S
Sbjct: 1008 PESRAPGESGP-QLARPSHLHLPMGPCYNLQPQASQSM--RARPRDVLLPVDEPSCSSSS 1064
Query: 63 GDNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQSPRTRQPEPDFY 114
G SPLP+A P G T G +P++ +R P+ P QP+P Y
Sbjct: 1065 GGFSPSPLPQAK--PVGITHG-IPQLPRVR--------PEHP---QPQPTHY 1102
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 33.5 bits (75), Expect = 0.43
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 354 DGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALS 398
+ +SC C F L+HSLG+G G+ G+ K + D D+++ S
Sbjct: 59 EAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTS 103
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 33.5 bits (75), Expect = 0.43
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 354 DGDSCFCDSDFHLSHSLGKGPGAEGGSGSPEKQLQVDQDYLIALS 398
+ +SC C F L+HSLG+G G+ G+ K + D D+++ S
Sbjct: 59 EAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTS 103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,595,168
Number of Sequences: 37866
Number of extensions: 1153999
Number of successful extensions: 4832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 4320
Number of HSP's gapped (non-prelim): 462
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.