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Search of human proteins with 31377806
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
(764 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 1540 0.0
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 103 5e-22
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 99 1e-20
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 99 1e-20
gi|5729776 CD300C antigen [Homo sapiens] 74 7e-13
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 72 3e-12
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 72 3e-12
gi|56550061 leukocyte membrane antigen [Homo sapiens] 71 3e-12
gi|31324530 CD300e molecule [Homo sapiens] 63 9e-10
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 62 2e-09
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 59 2e-08
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 57 5e-08
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 55 2e-07
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 55 2e-07
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 55 2e-07
gi|169646348 CD300 molecule-like family member d [Homo sapiens] 55 2e-07
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 55 2e-07
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 54 4e-07
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 54 5e-07
gi|37700254 triggering receptor expressed on myeloid cells-like ... 52 2e-06
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 52 3e-06
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 52 3e-06
gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo... 50 8e-06
gi|118572606 hemicentin 1 [Homo sapiens] 49 1e-05
gi|7657359 contactin 5 isoform long [Homo sapiens] 47 7e-05
gi|28373129 contactin 5 isoform short [Homo sapiens] 47 7e-05
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 47 9e-05
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 47 9e-05
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 47 9e-05
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 46 1e-04
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 1540 bits (3987), Expect = 0.0
Identities = 764/764 (100%), Positives = 764/764 (100%)
Query: 1 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 60
MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
Sbjct: 1 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 60
Query: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 120
RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
Sbjct: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 120
Query: 121 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 180
FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
Sbjct: 121 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 180
Query: 181 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
Sbjct: 181 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
Query: 241 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 300
EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
Sbjct: 241 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 300
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK 360
PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
Sbjct: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK 360
Query: 361 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG 420
GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
Sbjct: 361 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG 420
Query: 421 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV 480
NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
Sbjct: 421 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV 480
Query: 481 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 540
PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
Sbjct: 481 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 540
Query: 541 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ 600
WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
Sbjct: 541 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ 600
Query: 601 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV 660
DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
Sbjct: 601 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV 660
Query: 661 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE 720
ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
Sbjct: 661 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE 720
Query: 721 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA 764
STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA
Sbjct: 721 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA 764
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 103 bits (258), Expect = 5e-22
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA-RGGCITLISSEGYVSSKYAGRA 82
G V+ G +V+I C+Y P+SVNRH RKYWCR G R C T++S+ Y +Y R
Sbjct: 86 GSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRV 145
Query: 83 NLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 131
LT+FP+ G FVV ++QLS DD G Y CG+G + L ++L +S GP
Sbjct: 146 ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTISAGP 194
Score = 50.8 bits (120), Expect = 5e-06
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 331 GQLQEGSPIQAWQLFVNEESTIP-----RSPTVVKGVAGGSVAVLCPY-----NRKESKS 380
G L+ SP+ W+ EES+ + +V G GG+V + C Y NR + K
Sbjct: 62 GTLRPSSPL-CWR----EESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK- 115
Query: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440
YWC G C +V + + +Y R++L + P G F V L+QL+ D G Y
Sbjct: 116 --YWCRL-GPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYL 172
Query: 441 C 441
C
Sbjct: 173 C 173
Score = 38.5 bits (88), Expect = 0.024
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 244 LVYEDLRGSVTFHCALGPEVAN--VAKFLCRQSSGE-NCDVVVNTLGKRAPAFEGRILLN 300
LV + G+VT C P N K+ CR C +V+T + R+ L
Sbjct: 89 LVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALT 148
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSP 356
+ G F V ++ L +D G YLCG S+ + LF++ TI P
Sbjct: 149 DFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNM----------LFLSMNLTISAGP 194
Score = 35.8 bits (81), Expect = 0.15
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 131 PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-----LVIDSSGYVNP 185
P L +++ + + G VTI C + + + + Y L P ++ ++ Y +
Sbjct: 81 PNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKY-WCRLGPPRWICQTIVSTNQYTHH 139
Query: 186 NYTGRIRL-DIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSN 227
Y R+ L D G LF V ++QL D G YLC G ++N
Sbjct: 140 RYRDRVALTDFPQRG--LFVVRLSQLSPDDIGCYLCGIGSENN 180
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 99.4 bits (246), Expect = 1e-20
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA-RGGCITLISSEGYVSSKYAGRA 82
G V+ G +V+I C+Y P+SVNRH RKYWCR G R C T++S+ Y +Y R
Sbjct: 111 GSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRV 170
Query: 83 NLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS 128
LT+FP+ G FVV ++QLS DD G Y CG+G + L ++L +S
Sbjct: 171 ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
Score = 50.8 bits (120), Expect = 5e-06
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 331 GQLQEGSPIQAWQLFVNEESTIP-----RSPTVVKGVAGGSVAVLCPY-----NRKESKS 380
G L+ SP+ W+ EES+ + +V G GG+V + C Y NR + K
Sbjct: 87 GTLRPSSPL-CWR----EESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK- 140
Query: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440
YWC G C +V + + +Y R++L + P G F V L+QL+ D G Y
Sbjct: 141 --YWCRL-GPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYL 197
Query: 441 C 441
C
Sbjct: 198 C 198
Score = 38.1 bits (87), Expect = 0.031
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 244 LVYEDLRGSVTFHCALGPEVAN--VAKFLCRQSSGE-NCDVVVNTLGKRAPAFEGRILLN 300
LV + G+VT C P N K+ CR C +V+T + R+ L
Sbjct: 114 LVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALT 173
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQL 333
+ G F V ++ L +D G YLCG S+ +
Sbjct: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNM 206
Score = 37.0 bits (84), Expect = 0.069
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 131 PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-----LVIDSSGYVNP 185
P L +++ + + G VTI C + + + + Y L P ++ ++ Y +
Sbjct: 106 PNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKY-WCRLGPPRWICQTIVSTNQYTHH 164
Query: 186 NYTGRIRL-DIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
Y R+ L D G LF V ++QL D G YLC G ++N + +L + +
Sbjct: 165 RYRDRVALTDFPQRG--LFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTI----SAV 218
Query: 245 VYEDLRGSVTFHCALGPEVANV---------AKFLCRQSSGE 277
+++ ++ ALGP + ++ F C+ SSGE
Sbjct: 219 LFQKMK------AALGPWLLSLPCWPCLCLWLWFYCKGSSGE 254
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 99.4 bits (246), Expect = 1e-20
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA-RGGCITLISSEGYVSSKYAGRA 82
G V+ G +V+I C+Y P+SVNRH RKYWCR G R C T++S+ Y +Y R
Sbjct: 111 GSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRV 170
Query: 83 NLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS 128
LT+FP+ G FVV ++QLS DD G Y CG+G + L ++L +S
Sbjct: 171 ALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTIS 216
Score = 50.8 bits (120), Expect = 5e-06
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 19/121 (15%)
Query: 331 GQLQEGSPIQAWQLFVNEESTIP-----RSPTVVKGVAGGSVAVLCPY-----NRKESKS 380
G L+ SP+ W+ EES+ + +V G GG+V + C Y NR + K
Sbjct: 87 GTLRPSSPL-CWR----EESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK- 140
Query: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440
YWC G C +V + + +Y R++L + P G F V L+QL+ D G Y
Sbjct: 141 --YWCRL-GPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYL 197
Query: 441 C 441
C
Sbjct: 198 C 198
Score = 38.1 bits (87), Expect = 0.031
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 244 LVYEDLRGSVTFHCALGPEVAN--VAKFLCRQSSGE-NCDVVVNTLGKRAPAFEGRILLN 300
LV + G+VT C P N K+ CR C +V+T + R+ L
Sbjct: 114 LVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALT 173
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQL 333
+ G F V ++ L +D G YLCG S+ +
Sbjct: 174 DFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNM 206
Score = 37.0 bits (84), Expect = 0.069
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 131 PGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-----LVIDSSGYVNP 185
P L +++ + + G VTI C + + + + Y L P ++ ++ Y +
Sbjct: 106 PNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKY-WCRLGPPRWICQTIVSTNQYTHH 164
Query: 186 NYTGRIRL-DIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
Y R+ L D G LF V ++QL D G YLC G ++N + +L + +
Sbjct: 165 RYRDRVALTDFPQRG--LFVVRLSQLSPDDIGCYLCGIGSENNMLFLSMNLTI----SAV 218
Query: 245 VYEDLRGSVTFHCALGPEVANV---------AKFLCRQSSGE 277
+++ ++ ALGP + ++ F C+ SSGE
Sbjct: 219 LFQKMK------AALGPWLLSLPCWPCLCLWLWFYCKGSSGE 254
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 73.6 bits (179), Expect = 7e-13
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSL 415
P V G GGS++V C Y ++ K+WC Q RC +V+++G + GR+S+
Sbjct: 28 PMTVAGPVGGSLSVQCRYEKEHRTLNKFWC--RPPQILRCDKIVETKGSA-GKRNGRVSI 84
Query: 416 LEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTA--- 472
+ P N +FTV L LT DAG YWC DT W I+E E ++ G TA
Sbjct: 85 RDSPANLSFTVTLENLTEEDAGTYWC--GVDTPWLRDFHDPIVEVEVSVFPAGTTTASSP 142
Query: 473 -----VLGETLKVPCH 483
G K+P H
Sbjct: 143 QSSMGTSGPPTKLPVH 158
Score = 52.4 bits (124), Expect = 2e-06
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 21 PIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAG 80
P+ P V G S+S+ C Y +R K+WCR C ++ ++G + K G
Sbjct: 24 PLSHPMTVAGPVGGSLSVQCRYEKE--HRTLNKFWCRPPQILRCDKIVETKGS-AGKRNG 80
Query: 81 RANLTNFPENGTFVVNIAQLSQDDSGRYKCGL 112
R ++ + P N +F V + L+++D+G Y CG+
Sbjct: 81 RVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 112
Score = 49.3 bits (116), Expect = 1e-05
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
P V + GS++ C E + KF CR CD +V T G A GR+ +
Sbjct: 28 PMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQILRCDKIVETKGS-AGKRNGRVSIRD 86
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFV-NEESTIPRSPTVVK 360
+ SF+V + L +EDAG Y CG + PI ++ V +T SP
Sbjct: 87 SPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPIVEVEVSVFPAGTTTASSPQSSM 146
Query: 361 GVAG 364
G +G
Sbjct: 147 GTSG 150
Score = 38.9 bits (89), Expect = 0.018
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 449 WRTT-VEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNN-TGCQAL 506
WR++ + + ++ G L P V +G +L V C + + + K+WC+ C +
Sbjct: 9 WRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQILRCDKI 68
Query: 507 --PSQDEGPSKAFVNCDENSRLVSLTLNL--VTRADEGWYWCGV 546
G V+ ++ +S T+ L +T D G YWCGV
Sbjct: 69 VETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 112
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 71.6 bits (174), Expect = 3e-12
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGG-CITLISSE 71
F +S I +V G SV+I C P H R Y CR+ A G C T++S+
Sbjct: 10 FLPVSGALRILPEVKVEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTT 65
Query: 72 GYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINS-RGLSFDVSLEV 127
++ ++Y GR L +P F+V + QL++ DSG Y CG G+N+ RG + V+L V
Sbjct: 66 NFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNV 122
Score = 57.0 bits (136), Expect = 6e-08
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 359 VKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 418
V+G GGSV + CP ++ + E A +G C +V + ++KA+Y+GR++L +
Sbjct: 25 VEGELGGSVTIKCPLPEMH---VRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQY 81
Query: 419 PGNGTFTVILNQLTSRDAGFYWC 441
P F V + QLT D+G Y C
Sbjct: 82 PRKNLFLVEVTQLTESDSGVYAC 104
Score = 52.4 bits (124), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 242 PELVYE-DLRGSVTFHCALGPEVANVAKFLCRQSSGEN-CDVVVNTLGKRAPAFEGRILL 299
PE+ E +L GSVT C L PE+ +V +LCR+ +G C VV+T ++GR+ L
Sbjct: 21 PEVKVEGELGGSVTIKCPL-PEM-HVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTL 78
Query: 300 NPQDKDGSFSVVITGLRKEDAGRYLCGA 327
+ F V +T L + D+G Y CGA
Sbjct: 79 KQYPRKNLFLVEVTQLTESDSGVYACGA 106
Score = 40.4 bits (93), Expect = 0.006
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 125 LEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL--VIDSSGY 182
L VS +L + KV +LG +VTI CP + R L +++ V+ ++ +
Sbjct: 11 LPVSGALRILPEVKVEG-ELGGSVTIKCPLPEMHV--RIYLCREMAGSGTCGTVVSTTNF 67
Query: 183 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK 230
+ Y GR+ L Q + LF V + QL SD+G Y C AG +++ K
Sbjct: 68 IKAEYKGRVTLK-QYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGK 114
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 71.6 bits (174), Expect = 3e-12
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGG-CITLISSE 71
F +S I +V G SV+I C P H R Y CR+ A G C T++S+
Sbjct: 10 FLPVSGALRILPEVKVEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTT 65
Query: 72 GYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINS-RGLSFDVSLEV 127
++ ++Y GR L +P F+V + QL++ DSG Y CG G+N+ RG + V+L V
Sbjct: 66 NFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNV 122
Score = 57.0 bits (136), Expect = 6e-08
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 359 VKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 418
V+G GGSV + CP ++ + E A +G C +V + ++KA+Y+GR++L +
Sbjct: 25 VEGELGGSVTIKCPLPEMH---VRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQY 81
Query: 419 PGNGTFTVILNQLTSRDAGFYWC 441
P F V + QLT D+G Y C
Sbjct: 82 PRKNLFLVEVTQLTESDSGVYAC 104
Score = 52.4 bits (124), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 242 PELVYE-DLRGSVTFHCALGPEVANVAKFLCRQSSGEN-CDVVVNTLGKRAPAFEGRILL 299
PE+ E +L GSVT C L PE+ +V +LCR+ +G C VV+T ++GR+ L
Sbjct: 21 PEVKVEGELGGSVTIKCPL-PEM-HVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTL 78
Query: 300 NPQDKDGSFSVVITGLRKEDAGRYLCGA 327
+ F V +T L + D+G Y CGA
Sbjct: 79 KQYPRKNLFLVEVTQLTESDSGVYACGA 106
Score = 40.4 bits (93), Expect = 0.006
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 125 LEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL--VIDSSGY 182
L VS +L + KV +LG +VTI CP + R L +++ V+ ++ +
Sbjct: 11 LPVSGALRILPEVKVEG-ELGGSVTIKCPLPEMHV--RIYLCREMAGSGTCGTVVSTTNF 67
Query: 183 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK 230
+ Y GR+ L Q + LF V + QL SD+G Y C AG +++ K
Sbjct: 68 IKAEYKGRVTLK-QYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGK 114
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 71.2 bits (173), Expect = 3e-12
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 359 VKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 418
V G GGS++V CPY ++ KYWC Q C +V+++G + GR+S+ +
Sbjct: 24 VAGPVGGSLSVQCPYEKEHRTLNKYWC--RPPQIFLCDKIVETKGSA-GKRNGRVSIRDS 80
Query: 419 PGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNL------KVPGNVTA 472
P N +FTV L LT DAG YWC DT W ++E E ++ P ++TA
Sbjct: 81 PANLSFTVTLENLTEEDAGTYWC--GVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITA 138
Query: 473 VLGETL 478
T+
Sbjct: 139 AKTSTI 144
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 1 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 60
+LL+V C A+S + GP G S+S+ C Y +R KYWCR
Sbjct: 8 LLLWVPGCF-----ALSKCRTVAGPV------GGSLSVQCPYEKE--HRTLNKYWCRPPQ 54
Query: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 120
C ++ ++G + K GR ++ + P N +F V + L+++D+G Y CG+
Sbjct: 55 IFLCDKIVETKGS-AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDF 113
Query: 121 FD--VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF 154
D V +EVS P + T ++ +T TI F
Sbjct: 114 HDPVVEVEVSVFPASTSMTPA-SITAAKTSTITTAF 148
Score = 47.0 bits (110), Expect = 7e-05
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 251 GSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSV 310
GS++ C E + K+ CR CD +V T G A GR+ + + SF+V
Sbjct: 30 GSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGS-AGKRNGRVSIRDSPANLSFTV 88
Query: 311 VITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEEST--IPRSPTVVK 360
+ L +EDAG Y CG + P+ ++ V ST P S T K
Sbjct: 89 TLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITAAK 140
Score = 35.0 bits (79), Expect = 0.26
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 470 VTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG-CQALPSQ--DEGPSKAFVNCDENSRL 526
V +G +L V C + + + KYWC+ C + G V+ ++
Sbjct: 24 VAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPAN 83
Query: 527 VSLTLNL--VTRADEGWYWCGV 546
+S T+ L +T D G YWCGV
Sbjct: 84 LSFTVTLENLTEEDAGTYWCGV 105
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 63.2 bits (152), Expect = 9e-10
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSL 415
P V G AG S+ V C Y KYWC G + C +V+++G K + GR+S+
Sbjct: 21 PGSVTGTAGDSLTVWCQYESMYKGYNKYWC--RGQYDTSCESIVETKGEEKVERNGRVSI 78
Query: 416 LEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLW 449
+ P FTV + L DAG YWC T+W
Sbjct: 79 RDHPEALAFTVTMQNLNEDDAGSYWCKI--QTVW 110
Score = 56.6 bits (135), Expect = 8e-08
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRAN 83
GP V G+S+++ C Y S+ + KYWCR C +++ ++G + GR +
Sbjct: 20 GPGSVTGTAGDSLTVWCQYE--SMYKGYNKYWCRGQYDTSCESIVETKGEEKVERNGRVS 77
Query: 84 LTNFPENGTFVVNIAQLSQDDSGRYKC 110
+ + PE F V + L++DD+G Y C
Sbjct: 78 IRDHPEALAFTVTMQNLNEDDAGSYWC 104
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 458 IEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWN-NTGCQAL-----PSQDE 511
+ G +L PG+VT G++L V C + + Y KYWC+ +T C+++ + E
Sbjct: 12 LSGCLSLTGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCESIVETKGEEKVE 71
Query: 512 GPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVK 547
+ + + ++T+ + D G YWC ++
Sbjct: 72 RNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQ 107
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 252 SVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVV 311
S+T C K+ CR +C+ +V T G+ GR+ + + +F+V
Sbjct: 31 SLTVWCQYESMYKGYNKYWCRGQYDTSCESIVETKGEEKVERNGRVSIRDHPEALAFTVT 90
Query: 312 ITGLRKEDAGRYLCGAHSDGQLQEGS--PIQAWQLFVNEESTIPRSPT 357
+ L ++DAG Y C + L S P +++V+ T PR T
Sbjct: 91 MQNLNEDDAGSYWCKIQTVWVLDSWSRDPSDLVRVYVSPAITTPRRTT 138
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 62.0 bits (149), Expect = 2e-09
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 3 LFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARG 62
L L LL +FP +S + + SV G ++++ C YPPT + + +K WC++ +
Sbjct: 6 LHPLLLLLLLFPGSQAQSKA---QVLQSVAGQTLTVRCQYPPTG-SLYEKKGWCKEASAL 61
Query: 63 GCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKC 110
CI L++S + + R + + P+ G F V + L ++DSG Y C
Sbjct: 62 VCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWC 109
Score = 43.1 bits (100), Expect = 0.001
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 358 VVKGVAGGSVAVLCPYNRKESK-SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLL 416
V++ VAG ++ V C Y S K WC + A C LV S + R ++
Sbjct: 27 VLQSVAGQTLTVRCQYPPTGSLYEKKGWC--KEASALVCIRLVTSSKPRTMAWTSRFTIW 84
Query: 417 EEPGNGTFTVILNQLTSRDAGFYWC 441
++P G FTV + L D+G YWC
Sbjct: 85 DDPDAGFFTVTMTDLREEDSGHYWC 109
Score = 36.6 bits (83), Expect = 0.090
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 472 AVLGETLKVPCHFPCKFSSYEKY-WCKWNNT-GCQALPSQDEGPSKAFVN-----CDENS 524
+V G+TL V C +P S YEK WCK + C L + + + A+ + D ++
Sbjct: 30 SVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDA 89
Query: 525 RLVSLTLNLVTRADEGWYWCGV 546
++T+ + D G YWC +
Sbjct: 90 GFFTVTMTDLREEDSGHYWCRI 111
Score = 36.2 bits (82), Expect = 0.12
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 271 CRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
C+++S C +V + R A+ R + G F+V +T LR+ED+G Y C
Sbjct: 55 CKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWC 109
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 24 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGAR--GGCITLISSEGYVSSKYAGR 81
GPEE++ EG++VS+ C Y R RKYWCR+G C I +E GR
Sbjct: 21 GPEEISGFEGDTVSLQCTYREEL--RDHRKYWCRKGGILFSRCSGTIYAEEEGQETMKGR 78
Query: 82 ANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 131
++ + + + +V + L+ D+G Y CG+ S +SL V GP
Sbjct: 79 VSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEKRGPDESLLISLFVFPGP 128
Score = 50.4 bits (119), Expect = 6e-06
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSL 415
P + G G +V++ C Y + KYWC G RC + +E + +GR+S+
Sbjct: 22 PEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEEGQETMKGRVSI 81
Query: 416 LEEPGNGTFTVILNQLTSRDAGFYWC 441
+ + V L LT +DAG YWC
Sbjct: 82 RDSRQELSLIVTLWNLTLQDAGEYWC 107
Score = 42.7 bits (99), Expect = 0.001
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 457 IIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNN---TGCQ-ALPSQDEG 512
++ G L+ P ++ G+T+ + C + + + KYWC+ + C + +++EG
Sbjct: 12 LLPGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEEG 71
Query: 513 PS--KAFVNCDENSRLVSLTLNL--VTRADEGWYWCGVKQ 548
K V+ ++ + +SL + L +T D G YWCGV++
Sbjct: 72 QETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEK 111
Score = 34.3 bits (77), Expect = 0.45
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 252 SVTFHCALGPEVANVAKFLCRQSS--GENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFS 309
+V+ C E+ + K+ CR+ C + + +GR+ + ++ S
Sbjct: 32 TVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEEGQETMKGRVSIRDSRQELSLI 91
Query: 310 VVITGLRKEDAGRYLCGAHSDG 331
V + L +DAG Y CG G
Sbjct: 92 VTLWNLTLQDAGEYWCGVEKRG 113
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 57.4 bits (137), Expect = 5e-08
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSL 415
PT V G+ GS+ V C Y +K+WC GA C +LV + G + R+S+
Sbjct: 25 PTTVNGLERGSLTVQCVYRSGWETYLKWWC--RGAIWRDCKILVKTSGSEQEVKRDRVSI 82
Query: 416 LEEPGNGTFTVILNQLTSRDAGFYWC 441
+ N TFTV + L DA YWC
Sbjct: 83 KDNQKNRTFTVTMEDLMKTDADTYWC 108
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 1 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 60
M L L LL S + I GP VN +E S+++ C Y S K+WCR
Sbjct: 1 MPLLTLYLLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVY--RSGWETYLKWWCRGAI 58
Query: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 120
C L+ + G R ++ + +N TF V + L + D+ Y CG+ L
Sbjct: 59 WRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLG 118
Query: 121 FDVSLEVSQGPGLLNDT 137
V + + P +T
Sbjct: 119 VTVQVTIDPAPVTQEET 135
Score = 47.4 bits (111), Expect = 5e-05
Identities = 24/82 (29%), Positives = 36/82 (43%)
Query: 250 RGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFS 309
RGS+T C K+ CR + +C ++V T G R+ + K+ +F+
Sbjct: 33 RGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFT 92
Query: 310 VVITGLRKEDAGRYLCGAHSDG 331
V + L K DA Y CG G
Sbjct: 93 VTMEDLMKTDADTYWCGIEKTG 114
Score = 39.7 bits (91), Expect = 0.011
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 467 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCK---WNNTGCQAL-----PSQDEGPSKAFV 518
P V + +L V C + + +Y K+WC+ W + C+ L Q+ + +
Sbjct: 25 PTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRD--CKILVKTSGSEQEVKRDRVSI 82
Query: 519 NCDENSRLVSLTLNLVTRADEGWYWCGV-KQGHFYGETAAVYV 560
++ +R ++T+ + + D YWCG+ K G+ G T V +
Sbjct: 83 KDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTI 125
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEG 72
FP T S GP V G S+S+ C Y + KYWCRQ ++ + G
Sbjct: 146 FPGCLTVS---GPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQPCLPIWHEMVETGG 200
Query: 73 YVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLG--INSRGLS-------FDV 123
+ + +T+ P + TF V + L+ DD+G+Y+CG+ + GLS F V
Sbjct: 201 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 260
Query: 124 SLEVSQGPGLLNDTK 138
+ VS N K
Sbjct: 261 QVLVSSASSTENSVK 275
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWC------LW-EGAQNGRCPLLVDSEGWVKAQ 408
P+ V G G S++V C Y K KYWC +W E + G SEG V++
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETG------GSEGVVRSD 208
Query: 409 YEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWC 441
++ + + PG+ TFTV L LT+ DAG Y C
Sbjct: 209 ---QVIITDHPGDLTFTVTLENLTADDAGKYRC 238
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 467 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDE----GPSKAFVNCDE 522
P V +GE+L V C + K+ ++ KYWC+ LP E G S+ V D+
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQ-----PCLPIWHEMVETGGSEGVVRSDQ 209
Query: 523 -------NSRLVSLTLNLVTRADEGWYWCGV 546
++TL +T D G Y CG+
Sbjct: 210 VIITDHPGDLTFTVTLENLTADDAGKYRCGI 240
Score = 37.0 bits (84), Expect = 0.069
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
P V + S++ C + K+ CRQ +V T G ++++
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITD 214
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCG 326
D +F+V + L +DAG+Y CG
Sbjct: 215 HPGDLTFTVTLENLTADDAGKYRCG 239
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEG 72
FP T S GP V G S+S+ C Y + KYWCRQ ++ + G
Sbjct: 77 FPGCLTVS---GPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQPCLPIWHEMVETGG 131
Query: 73 YVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLG--INSRGLS-------FDV 123
+ + +T+ P + TF V + L+ DD+G+Y+CG+ + GLS F V
Sbjct: 132 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 191
Query: 124 SLEVSQGPGLLNDTK 138
+ VS N K
Sbjct: 192 QVLVSSASSTENSVK 206
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWC------LW-EGAQNGRCPLLVDSEGWVKAQ 408
P+ V G G S++V C Y K KYWC +W E + G SEG V++
Sbjct: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETG------GSEGVVRSD 139
Query: 409 YEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWC 441
++ + + PG+ TFTV L LT+ DAG Y C
Sbjct: 140 ---QVIITDHPGDLTFTVTLENLTADDAGKYRC 169
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 467 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDE----GPSKAFVNCDE 522
P V +GE+L V C + K+ ++ KYWC+ LP E G S+ V D+
Sbjct: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQ-----PCLPIWHEMVETGGSEGVVRSDQ 140
Query: 523 -------NSRLVSLTLNLVTRADEGWYWCGV 546
++TL +T D G Y CG+
Sbjct: 141 VIITDHPGDLTFTVTLENLTADDAGKYRCGI 171
Score = 37.0 bits (84), Expect = 0.069
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
P V + S++ C + K+ CRQ +V T G ++++
Sbjct: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITD 145
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCG 326
D +F+V + L +DAG+Y CG
Sbjct: 146 HPGDLTFTVTLENLTADDAGKYRCG 170
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 55.1 bits (131), Expect = 2e-07
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEG 72
FP T S GP V G S+S+ C Y + KYWCRQ ++ + G
Sbjct: 146 FPGCLTVS---GPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQPCLPIWHEMVETGG 200
Query: 73 YVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLG--INSRGLS-------FDV 123
+ + +T+ P + TF V + L+ DD+G+Y+CG+ + GLS F V
Sbjct: 201 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 260
Query: 124 SLEVSQGPGLLNDTK 138
+ VS N K
Sbjct: 261 QVLVSSASSTENSVK 275
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWC------LW-EGAQNGRCPLLVDSEGWVKAQ 408
P+ V G G S++V C Y K KYWC +W E + G SEG V++
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETG------GSEGVVRSD 208
Query: 409 YEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWC 441
++ + + PG+ TFTV L LT+ DAG Y C
Sbjct: 209 ---QVIITDHPGDLTFTVTLENLTADDAGKYRC 238
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 467 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDE----GPSKAFVNCDE 522
P V +GE+L V C + K+ ++ KYWC+ LP E G S+ V D+
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQ-----PCLPIWHEMVETGGSEGVVRSDQ 209
Query: 523 -------NSRLVSLTLNLVTRADEGWYWCGV 546
++TL +T D G Y CG+
Sbjct: 210 VIITDHPGDLTFTVTLENLTADDAGKYRCGI 240
Score = 37.0 bits (84), Expect = 0.069
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
P V + S++ C + K+ CRQ +V T G ++++
Sbjct: 155 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITD 214
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCG 326
D +F+V + L +DAG+Y CG
Sbjct: 215 HPGDLTFTVTLENLTADDAGKYRCG 239
>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
Length = 194
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/157 (27%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 9 LLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGG-CITL 67
LL + P S + I GP VN E S+++ C Y T W QGA C L
Sbjct: 8 LLLILPGYSIAAKITGPTTVNGSEQGSLTVQCAY---GSGWETYLKWRCQGADWNYCNIL 64
Query: 68 ISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEV 127
+ + G R ++ + +N F V + L +DD+ Y C G G+ V ++V
Sbjct: 65 VKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWC--GTERPGIDLGVKVQV 122
Query: 128 SQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKS 164
+ PG +T T T + F QK S
Sbjct: 123 TINPGTQTAVSEWT-----TTTASLAFTAAATQKTSS 154
Score = 52.0 bits (123), Expect = 2e-06
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSL 415
PT V G GS+ V C Y +K+ C +GA C +LV + G + + R+S+
Sbjct: 24 PTTVNGSEQGSLTVQCAYGSGWETYLKWRC--QGADWNYCNILVKTNGSEQEVKKNRVSI 81
Query: 416 LEEPGNGTFTVILNQLTSRDAGFYWCLT 443
+ N FTV + L DA YWC T
Sbjct: 82 RDNQKNHVFTVTMENLKRDDADSYWCGT 109
Score = 50.8 bits (120), Expect = 5e-06
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
P V +GS+T CA G K+ C+ + C+++V T G + R+ +
Sbjct: 24 PTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNYCNILVKTNGSEQEVKKNRVSIRD 83
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCGAHSDG 331
K+ F+V + L+++DA Y CG G
Sbjct: 84 NQKNHVFTVTMENLKRDDADSYWCGTERPG 113
Score = 30.8 bits (68), Expect = 4.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 465 KVPGNVTAVLGE--TLKVPCHFPCKFSSYEKYWCK---WNNTGCQAL-----PSQDEGPS 514
K+ G T E +L V C + + +Y K+ C+ WN C L Q+ +
Sbjct: 20 KITGPTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNY--CNILVKTNGSEQEVKKN 77
Query: 515 KAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQ 548
+ + ++ + + ++T+ + R D YWCG ++
Sbjct: 78 RVSIRDNQKNHVFTVTMENLKRDDADSYWCGTER 111
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 55.1 bits (131), Expect = 2e-07
Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
S+ IN+++L D+G+Y+C A + S + K L V+ P + G T +
Sbjct: 2197 SLTINKVKLLDSGEYVCVARNPSGDDTKMYKLDVVSKPPL-----INGLYTNRTVIKATA 2251
Query: 264 ANVAK--FLCRQS---SGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKE 318
+K F CR S E ++ + + AP + RI ++ K+G+ I +R
Sbjct: 2252 VRHSKKHFDCRAEGTPSPEVMWIMPDNIFLTAPYYGSRITVH---KNGTLE--IRNVRLS 2306
Query: 319 DAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIP--RSPTVVKGVA--GGSVAVLCPYN 374
D+ ++C A ++G G + QL V E P R+P K VA G S A+ C +
Sbjct: 2307 DSADFICVARNEG----GESVLVVQLEVLEMLRRPTFRNPFNEKIVAQLGKSTALNCSVD 2362
Query: 375 RKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSR 434
I W L G + P Y+ ++ NG+F I+++ T
Sbjct: 2363 GNPPPEI-IWILPNGTRFSNGP----------QSYQYLIA-----SNGSF--IISKTTRE 2404
Query: 435 DAGFYWCLTNGDTLWRTTVEIKIIEGEPNL--KVPGNVTAVLGETLKVPC 482
DAG Y C + + I I +P + PG V + GE+L + C
Sbjct: 2405 DAGKYRCAARNKVGYIEKLVILEIGQKPVILTYAPGTVKGISGESLSLHC 2454
Score = 53.9 bits (128), Expect = 5e-07
Identities = 95/415 (22%), Positives = 167/415 (40%), Gaps = 75/415 (18%)
Query: 87 FPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGR 146
F NG+ +N +L DSG Y C S + L+V P L+N +
Sbjct: 2192 FHANGSLTINKVKLL--DSGEYVCVARNPSGDDTKMYKLDVVSKPPLINGLYTNRTVIKA 2249
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV 206
T + + + + + + P D+ P Y RI + GT +
Sbjct: 2250 TAVRHSKKHFDCRAEGTPSPEVMWIMP----DNIFLTAPYYGSRITVHKNGT------LE 2299
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLK---------PEPELVYEDLRGSVTFHC 257
I +RLSD+ ++C A ++ + L+VL+ P E + L S +C
Sbjct: 2300 IRNVRLSDSADFICVARNEGGESVLVVQLEVLEMLRRPTFRNPFNEKIVAQLGKSTALNC 2359
Query: 258 ALG----PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVIT 313
++ PE+ + R S+G +++ I N GSF +I+
Sbjct: 2360 SVDGNPPPEIIWILPNGTRFSNGPQ-------------SYQYLIASN-----GSF--IIS 2399
Query: 314 GLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCP 372
+EDAG+Y C A + G +++ ++ Q V + +P VKG++G S+++ C
Sbjct: 2400 KTTREDAGKYRCAARNKVGYIEKLVILEIGQKPV----ILTYAPGTVKGISGESLSLHCV 2455
Query: 373 YNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLT 432
+ +IK W + G +VD + Q G+ L + NG T+++ + T
Sbjct: 2456 SDGIPKPNIK-WTMPSG-------YVVD-----RPQINGKYILHD---NG--TLVIKEAT 2497
Query: 433 SRDAGFYWCLTN---GDTLWRTTVEIKIIEGEPNL--KVPGNVTAVLGETLKVPC 482
+ D G Y C G TL TV + I+ P + + P ++ G ++ C
Sbjct: 2498 AYDRGNYICKAQNSVGHTL--ITVPVMIVAYPPRITNRPPRSIVTRTGAAFQLHC 2550
Score = 36.6 bits (83), Expect = 0.090
Identities = 53/242 (21%), Positives = 87/242 (35%), Gaps = 29/242 (11%)
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANV 266
I ++ + D GQYLC A + ++ + L V+ P ++ E +T H +
Sbjct: 1710 IQRVEIQDRGQYLCSASNLFGTDHLHVTLSVVSYPPRIL-ERRTKEITVHS------GST 1762
Query: 267 AKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCG 326
+ CR + G V L + E ++V+ L D G Y C
Sbjct: 1763 VELKCR-AEGRPSPTVTWILANQTVVSESSQGSRQAVVTVDGTLVLHNLSIYDRGFYKCV 1821
Query: 327 AHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCL 386
A + G + S + Q+ + + V+ G G S+ + C S+ YW L
Sbjct: 1822 ASNPG--GQDSLLVKIQVIAAPPVILEQRRQVIVGTWGESLKLPCTAKGTPQPSV-YWVL 1878
Query: 387 WEGAQNGRCPLLVDSEGWVK-AQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNG 445
+G + VK Q+ L G T+ + L S D G Y C+
Sbjct: 1879 SDGTE-------------VKPLQFTNSKLFLFSNG----TLYIRNLASSDRGTYECIATS 1921
Query: 446 DT 447
T
Sbjct: 1922 ST 1923
Score = 36.2 bits (82), Expect = 0.12
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 34/188 (18%)
Query: 90 NGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDL-GRTV 148
NG+F+ I++ +++D+G+Y+C + V LE+ Q P +L + G ++
Sbjct: 2393 NGSFI--ISKTTREDAGKYRCAARNKVGYIEKLVILEIGQKPVILTYAPGTVKGISGESL 2450
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYV--NPNYTGRIRLDIQGTGQLLFSVV 206
+++C ++ K + SGYV P G+ L GT +V
Sbjct: 2451 SLHCV--SDGIPKPNIKWTM----------PSGYVVDRPQINGKYILHDNGT------LV 2492
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVT-------FHC-A 258
I + D G Y+C+A + + ++ P + R VT HC A
Sbjct: 2493 IKEATAYDRGNYICKAQNSVGHTLITVPVMIVAYPPRITNRPPRSIVTRTGAAFQLHCVA 2552
Query: 259 LG---PEV 263
LG PE+
Sbjct: 2553 LGVPKPEI 2560
Score = 34.7 bits (78), Expect = 0.34
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 329 SDGQLQ----EGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYW 384
SD Q+ E P++ ++ ++ TV+ GG+V + CP + + W
Sbjct: 454 SDAQITLPRAEMRPVKHKWTMISRDNNTKLEHTVL---VGGTVGLNCPGQGDPTPHVD-W 509
Query: 385 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 444
L +G++ R P V +G + G+L L S D G Y C+++
Sbjct: 510 LLADGSKV-RAPY-VSEDGRILIDKSGKLEL-------------QMADSFDTGVYHCISS 554
Query: 445 G----DTL-WRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCH 483
D L +R TV ++E + + T +GETL +PCH
Sbjct: 555 NYDDADILTYRITVVEPLVEAYQENGI--HHTVFIGETLDLPCH 596
Score = 30.0 bits (66), Expect = 8.4
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 27/162 (16%)
Query: 90 NGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND--TKVYTVDLGRT 147
NGT ++I ++ D G+Y C V+L V P + + TK TV G T
Sbjct: 1705 NGT--LSIQRVEIQDRGQYLCSASNLFGTDHLHVTLSVVSYPPRILERRTKEITVHSGST 1762
Query: 148 VTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSV-- 205
V + C A+ R S L V+ S QG+ Q + +V
Sbjct: 1763 VELKC-----RAEGRPSPTVTWILANQTVVSESS--------------QGSRQAVVTVDG 1803
Query: 206 --VINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELV 245
V++ L + D G Y C A + + +QV+ P ++
Sbjct: 1804 TLVLHNLSIYDRGFYKCVASNPGGQDSLLVKIQVIAAPPVIL 1845
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 54.3 bits (129), Expect = 4e-07
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 344 LFVNEESTIPRSPTVVKGVAGGSVAVLCPY-NRKESKSIKYWCLWEGAQNGRCPLLVDSE 402
LFV E S + TV +GVAG S+ V CPY + K K WC G + G C +V +
Sbjct: 10 LFVTELSGA-HNTTVFQGVAGQSLQVSCPYDSMKHWGRRKAWCRQLG-EKGPCQRVVSTH 67
Query: 403 G-WVKA---QYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL----TNGDTLWRTTVE 454
W+ + ++ G ++ ++ GT T+ L L DAG Y C + DTL + VE
Sbjct: 68 NLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQCQSLHGSEADTLRKVLVE 127
Query: 455 I 455
+
Sbjct: 128 V 128
Score = 40.4 bits (93), Expect = 0.006
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 31 VEGNSVSITCYYPPTSVNRHTRKYWCRQ-GARGGCITLISSEGYVSSKYAGRAN----LT 85
V G S+ ++C Y + RK WCRQ G +G C ++S+ + R N +T
Sbjct: 27 VAGQSLQVSCPYDSMK-HWGRRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAIT 85
Query: 86 NFPENGTFVVNIAQLSQDDSGRYKC 110
+ GT + + L D+G Y+C
Sbjct: 86 DDTLGGTLTITLRNLQPHDAGLYQC 110
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 53.9 bits (128), Expect = 5e-07
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 354 RSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRL 413
+ P V+ GS+ V C Y + IK+WC G + C +L+++ G + + R+
Sbjct: 56 QGPESVRAPEQGSLTVQCHYKQGWETYIKWWC--RGVRWDTCKILIETRGSEQGEKSDRV 113
Query: 414 SLLEEPGNGTFTVILNQLTSRDAGFYWC 441
S+ + + TFTV + L DA YWC
Sbjct: 114 SIKDNQKDRTFTVTMEGLRRDDADVYWC 141
Score = 51.6 bits (122), Expect = 3e-06
Identities = 27/90 (30%), Positives = 41/90 (45%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
PE V +GS+T C K+ CR + C +++ T G R+ +
Sbjct: 58 PESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDTCKILIETRGSEQGEKSDRVSIKD 117
Query: 302 QDKDGSFSVVITGLRKEDAGRYLCGAHSDG 331
KD +F+V + GLR++DA Y CG G
Sbjct: 118 NQKDRTFTVTMEGLRRDDADVYWCGIERRG 147
Score = 48.5 bits (114), Expect = 2e-05
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 22 IFGPEEVNSVEGNSVSITCYYPP---TSVNRHTRKYWCRQGARGGCITLISSEGYVSSKY 78
I GPE V + E S+++ C+Y T + K+WCR C LI + G +
Sbjct: 55 IQGPESVRAPEQGSLTVQCHYKQGWETYI-----KWWCRGVRWDTCKILIETRGSEQGEK 109
Query: 79 AGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 131
+ R ++ + ++ TF V + L +DD+ Y C GI RG ++V P
Sbjct: 110 SDRVSIKDNQKDRTFTVTMEGLRRDDADVYWC--GIERRGPDLGTQVKVIVDP 160
Score = 43.5 bits (101), Expect = 7e-04
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 463 NLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWC---KWNNTGCQAL-----PSQDEGPS 514
+++ P +V A +L V CH+ + +Y K+WC +W+ C+ L Q E
Sbjct: 54 SIQGPESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDT--CKILIETRGSEQGEKSD 111
Query: 515 KAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQ 548
+ + ++ R ++T+ + R D YWCG+++
Sbjct: 112 RVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIER 145
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 52.4 bits (124), Expect = 2e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 25 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANL 84
PEE++ G ++ + C Y P + K WC+Q + C L++S ++ +
Sbjct: 25 PEELHKHPGQTLLLQCQYSPKR-GPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQKSHYTI 83
Query: 85 TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSF---DVSLEVSQGP 131
+ P G F + + QL+Q+DSG Y CG+ S + ++SL VS P
Sbjct: 84 WDKPNAGFFNITMIQLTQNDSGFYWCGIYNASENIITVLRNISLVVSPAP 133
Score = 48.5 bits (114), Expect = 2e-05
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 364 GGSVAVLCPYNRKESK-SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNG 422
G ++ + C Y+ K K WC + RC LLV S A + ++ ++P G
Sbjct: 33 GQTLLLQCQYSPKRGPYQPKSWC--QQTSPSRCTLLVTSSKPWTAVQKSHYTIWDKPNAG 90
Query: 423 TFTVILNQLTSRDAGFYWC 441
F + + QLT D+GFYWC
Sbjct: 91 FFNITMIQLTQNDSGFYWC 109
Score = 36.6 bits (83), Expect = 0.090
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 462 PNLKVPGNVTAVLGETLKVPCHFPCKFSSYE-KYWCKWNNTGCQALPSQDEGPSKAFVNC 520
P VP + G+TL + C + K Y+ K WC+ + L P A
Sbjct: 20 PQGAVPEELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQKS 79
Query: 521 D------ENSRLVSLTLNLVTRADEGWYWCGV 546
N+ ++T+ +T+ D G+YWCG+
Sbjct: 80 HYTIWDKPNAGFFNITMIQLTQNDSGFYWCGI 111
Score = 30.0 bits (66), Expect = 8.4
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 242 PELVYEDLRGSVTFHCALGPEVANVA-KFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 300
PE +++ ++ C P+ K C+Q+S C ++V + + +
Sbjct: 25 PEELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQKSHYTIW 84
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHS 329
+ G F++ + L + D+G Y CG ++
Sbjct: 85 DKPNAGFFNITMIQLTQNDSGFYWCGIYN 113
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 51.6 bits (122), Expect = 3e-06
Identities = 102/456 (22%), Positives = 165/456 (36%), Gaps = 94/456 (20%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF 154
+ I LS D+G Y C G + V + P + + G T T+ C
Sbjct: 3857 LQIHGLSVADTGEYSCVCGQERTSATLTVR---APQPVFREPLQSLQAEEGSTATLQCEL 3913
Query: 155 KTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQG-TGQLLFSVVINQLRLS 213
A V+ S G + GR +QG T +L V+ L+
Sbjct: 3914 SEPTAT---------------VVWSKGGLQLQANGRREPRLQGCTAEL----VLQDLQRE 3954
Query: 214 DAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQ 273
D G+Y C G + S ++ EL ++++ T H LC +
Sbjct: 3955 DTGEYTCTCGSQATSATLTVTAAPVRFLRELQHQEVDEGGTAH-------------LCCE 4001
Query: 274 SSGENCDVVVNTLGKRAPAFEGRILLNPQDK-----DGSFS-VVITGLRKEDAGRYLCGA 327
S V +G + L P K DG+ + +++ G+ +EDAG Y C
Sbjct: 4002 LSRAGASVEWR---------KGSLQLFPCAKYQMVQDGAAAELLVRGVEQEDAGDYTCDT 4052
Query: 328 HSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGV---AGGSVAVLCPYNRKESKSIKYW 384
G Q + + P+ T ++ + G + C + ES ++ W
Sbjct: 4053 ---GHTQSMASLSV-------RVPRPKFKTRLQSLEQETGDIARLCCQLSDAESGAVVQW 4102
Query: 385 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 444
L EG + P +YE R T ++++QL ++D G Y C+T
Sbjct: 4103 -LKEGVELHAGP-----------KYEMRSQ------GATRELLIHQLEAKDTGEYACVTG 4144
Query: 445 GDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQ 504
G +T +++ E E + V G V A + T F C+ S +W Q
Sbjct: 4145 GQ---KTAASLRVTEPEVTI-VRGLVDAEV--TADEDVEFSCEVSRAGATGVQW---CLQ 4195
Query: 505 ALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 540
LP Q ++ V + R+ +L L VT D G
Sbjct: 4196 GLPLQSNEVTEVAV---RDGRIHTLRLKGVTPEDAG 4228
Score = 39.7 bits (91), Expect = 0.011
Identities = 97/463 (20%), Positives = 163/463 (35%), Gaps = 89/463 (19%)
Query: 28 VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNF 87
V++V G C + H +W + G G S E ++ R L
Sbjct: 807 VDAVAGGPAQFEC----ETSEAHVHVHWYKDGMELGH----SGERFLQEDVGTRHRLV-- 856
Query: 88 PENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKV----YTVD 143
A +++ D G Y C +G +S D L VS+ + ++ +
Sbjct: 857 ---------AATVTRQDEGTYSCRVGEDS----VDFRLRVSEPKVVFAKEQLARRKLQAE 903
Query: 144 LGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLF 203
G + T++C + AQ + YK + SS V TG R
Sbjct: 904 AGASATLSC--EVAQAQTEVTWYKD-----GKKLSSSSKVCMEATGCTR----------- 945
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
+V+ Q +DAG+Y C+AG + + L V EP++V+ H + E
Sbjct: 946 RLVVQQAGQADAGEYSCEAG----GQRLSFHLDV--KEPKVVFAK---DQVAHSEVQAEA 996
Query: 264 ANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 323
A C + + +V+ GK+ + ++ + K +V+ K DAG Y
Sbjct: 997 GASATLSCEVAQAQT-EVMWYKDGKK---LSSSLKVHVEAKGCRRRLVVQQAGKTDAGDY 1052
Query: 324 LCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKY 383
C A + +F E+S V+ AG S + C + +++ Y
Sbjct: 1053 SCEARGQRVSFRLHITEPKMMFAKEQSV----HNEVQAEAGASAMLSCEVAQAQTEVTWY 1108
Query: 384 WCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT 443
++G+ + S V + +G T ++L Q DAG Y C
Sbjct: 1109 -------KDGK---KLSSSSKVGMEVKG----------CTRRLVLPQAGKADAGEYSCEA 1148
Query: 444 NGDTLWRTTVEIKIIEGE----PNLKVPGNVTAVLGETLKVPC 482
G R + + I E + V V A G T + C
Sbjct: 1149 GGQ---RVSFHLHITEPKGVFAKEQSVHNEVQAEAGTTAMLSC 1188
Score = 36.6 bits (83), Expect = 0.090
Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 92 TFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTIN 151
T V+ AQ+ DS Y C +G + V ++ LL +LG TVT+
Sbjct: 1775 TLTVHGAQVL--DSAIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPV---CGELGGTVTLA 1829
Query: 152 CPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLR 211
C A+ V+ G R ++ +G + S+ + LR
Sbjct: 1830 CELSPACAE---------------VVWRCGNTQLRVGKRFQMVAEGPVR---SLTVLGLR 1871
Query: 212 LSDAGQYLCQAGDDSNSNKKNADL-QVLKPEPEL--VYEDLRGSVTFHCALGPEVANVAK 268
DAG+Y+C++ DD S + + +V+K L V + G TF C + P V
Sbjct: 1872 AEDAGEYVCESRDDHTSAQLTVSVPRVVKFMSGLSTVVAEEGGEATFQCVVSPSDVAVVW 1931
Query: 269 F 269
F
Sbjct: 1932 F 1932
Score = 35.8 bits (81), Expect = 0.15
Identities = 50/247 (20%), Positives = 94/247 (38%), Gaps = 55/247 (22%)
Query: 27 EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTN 86
EV + G S ++C T W + G + +SS V + G
Sbjct: 1083 EVQAEAGASAMLSCEV----AQAQTEVTWYKDGKK------LSSSSKVGMEVKGCTRRLV 1132
Query: 87 FPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLL-NDTKVYT---V 142
P+ G + D+G Y C G G L +++ G+ + V+
Sbjct: 1133 LPQAG----------KADAGEYSCEAG----GQRVSFHLHITEPKGVFAKEQSVHNEVQA 1178
Query: 143 DLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLL 202
+ G T ++C + Q + YK + + ++R++++G + L
Sbjct: 1179 EAGTTAMLSC--EVAQPQTEVTWYKD-------------GKKLSSSSKVRMEVKGCTRRL 1223
Query: 203 FSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP-----EPELVYEDLRGSVTFHC 257
V+ Q+ +DAG+Y C+AG + + L + +P + +LV+ ++R
Sbjct: 1224 ---VVQQVGKADAGEYSCEAG----GQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASA 1276
Query: 258 ALGPEVA 264
L EVA
Sbjct: 1277 TLSCEVA 1283
Score = 35.8 bits (81), Expect = 0.15
Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 262 EVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAG 321
E+ K CR + + GK IL+ +D DGS ++++ L D+G
Sbjct: 6026 ELGETVKLACRVTGTPKPVISWYKDGKAVQVDPHHILI--EDPDGSCALILDSLTGVDSG 6083
Query: 322 RYLC-GAHSDGQLQEGSPI--QAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKES 378
+Y+C A + G I Q FVN+ + SP V E
Sbjct: 6084 QYMCFAASAAGNCSTLGKILVQVPPRFVNK---VRASPFV------------------EG 6122
Query: 379 KSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGF 438
+ ++ C EGA + D + L EP +G +++ + D G
Sbjct: 6123 EDAQFTCTIEGAPYPQIRWYKDGALLTTGN---KFQTLSEPRSGLLVLVIRAASKEDLGL 6179
Query: 439 YWC-LTNGDTLWRTTVEIKI 457
Y C L N R + E++I
Sbjct: 6180 YECELVNRLGSARASAELRI 6199
Score = 34.3 bits (77), Expect = 0.45
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 30/134 (22%)
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNAD------LQVLKPEPELVYEDLRGSVTFHC 257
++ ++ ++ D+ Y C+ G + + ++L+P V +L G+VT C
Sbjct: 1775 TLTVHGAQVLDSAIYSCRVGAEGQDFPVQVEEVAAKFCRLLEP----VCGELGGTVTLAC 1830
Query: 258 ALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAF-EGRILLNPQDKDGSFSVVITGLR 316
L P A V C +GKR EG + S+ + GLR
Sbjct: 1831 ELSPACAEVVW---------RCGNTQLRVGKRFQMVAEGPVR----------SLTVLGLR 1871
Query: 317 KEDAGRYLCGAHSD 330
EDAG Y+C + D
Sbjct: 1872 AEDAGEYVCESRDD 1885
Score = 32.7 bits (73), Expect = 1.3
Identities = 56/291 (19%), Positives = 108/291 (37%), Gaps = 43/291 (14%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY----TVDLGRTVTINC 152
+ Q+ + D+G Y C G G L +++ + ++ + G + T++C
Sbjct: 1225 VQQVGKADAGEYSCEAG----GQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASATLSC 1280
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
+ AQ + YK + SS V G +R +V+ Q
Sbjct: 1281 --EVAQAQTEVTWYKD-----GKKLSSSSKVRIEAAGCMR-----------QLVVQQAGQ 1322
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
+DAG+Y C+AG + + L V +P+ E L H + E +A C
Sbjct: 1323 ADAGEYTCEAG----GQRLSFHLDVSEPKAVFAKEQLA-----HRKVQAEAGAIATLSCE 1373
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQ 332
+ + +V GK+ + + + +V+ + D G Y C A +
Sbjct: 1374 VAQAQT-EVTWYKDGKK---LSSSSKVRMEAVGCTRRLVVQQACQADTGEYSCEAGGQ-R 1428
Query: 333 LQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKY 383
L + ++ +E + R V+ AG S + C + +++ + Y
Sbjct: 1429 LSFSLDVAEPKVVFAKEQPVHRE---VQAQAGASTTLSCEVAQAQTEVMWY 1476
Score = 32.3 bits (72), Expect = 1.7
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 205 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLR----GSVTFHCALG 260
++I L D+G+Y C+AG +S+ + ++ + L +DL G+ T C L
Sbjct: 3152 LLITGATLQDSGRYKCEAGGACSSSIVRVHARPVRFQEAL--KDLEVLEGGAATLRCVLS 3209
Query: 261 PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA 320
A V + G N V+ K + EG +L +V+ LR +D+
Sbjct: 3210 SVAAPV-----KWCYGNN---VLRPGDKYSLRQEGAML----------ELVVRNLRPQDS 3251
Query: 321 GRYLC 325
GRY C
Sbjct: 3252 GRYSC 3256
Score = 30.8 bits (68), Expect = 4.9
Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 35/239 (14%)
Query: 89 ENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTV 148
E T + I+ L + DS Y C +G + S L + ++ D + V G +
Sbjct: 2966 EGLTLRLTISALEKADSDTYTCDIG---QAQSRAQLLVQGRRVHIIEDLEDVDVQEGSSA 3022
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 208
T C N + PV ++ N I D Q G + + +
Sbjct: 3023 TFRCRISPANYE------------PVHWFLDKTPLHANELNEI--DAQPGGYHVLT--LR 3066
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAK 268
QL L D+G +AGD + +A L+V + +P + +L + G ++ V
Sbjct: 3067 QLALKDSGTIYFEAGDQ----RASAALRVTE-KPSVFSRELTDATITE---GEDLTLV-- 3116
Query: 269 FLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGA 327
C S+ CD+ V K G + ++ITG +D+GRY C A
Sbjct: 3117 --CETST---CDIPV-CWTKDGKTLRGSARCQLSHEGHRAQLLITGATLQDSGRYKCEA 3169
Score = 30.8 bits (68), Expect = 4.9
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 47/217 (21%)
Query: 16 ISTKSPIFGPE--EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA--RGGCITLISSE 71
++ K +F E + EG +++ C + W + G RG +S E
Sbjct: 3091 VTEKPSVFSRELTDATITEGEDLTLVCETSTCDIP----VCWTKDGKTLRGSARCQLSHE 3146
Query: 72 GYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 131
G+ RA L I + DSGRYKC G V +
Sbjct: 3147 GH-------RAQLL-----------ITGATLQDSGRYKCEAGGACSSSIVRVHARPVRFQ 3188
Query: 132 GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRI 191
L D +V G T+ C + A PV + + P +
Sbjct: 3189 EALKDLEVLE---GGAATLRCVLSSVAA-------------PVKWCYGNNVLRPGDKYSL 3232
Query: 192 RLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNS 228
R + G +L +V+ LR D+G+Y C GD + S
Sbjct: 3233 RQE----GAML-ELVVRNLRPQDSGRYSCSFGDQTTS 3264
Score = 30.4 bits (67), Expect = 6.4
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND----TKVYTVDLGRTVTINC 152
+ Q Q +G Y C G S+ LSF L V++ + ++ + G + T++C
Sbjct: 1501 VQQAGQAVAGEYSCEAG--SQRLSFH--LHVAEPKAVFAKEQPASREVQAEAGTSATLSC 1556
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
+ AQ + YK + + ++R++ G + L V+ +
Sbjct: 1557 --EVAQAQTEVTWYKD-------------GKKLSSSSKVRMEAVGCTRRL---VVQEAGQ 1598
Query: 213 SDAGQYLCQAGDDSNS-NKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVA 264
+DAG+Y C+AGD S + A+ +V+ + + + +++ L EVA
Sbjct: 1599 ADAGEYSCKAGDQRLSFHLHVAEPKVVFAKEQPAHREVQAEAGASATLSCEVA 1651
Score = 30.0 bits (66), Expect = 8.4
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 126 EVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNP 185
+ S P L K + V +G+ T++C QI P + P
Sbjct: 5 QFSGAPRFLTRPKAFVVSVGKDATLSC---------------QIVGNPTPQVSWEKDQQP 49
Query: 186 NYTG-RIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQA 222
G R RL G L+ + I L L D+GQY+C+A
Sbjct: 50 VAAGARFRLAQDGD---LYRLTILDLALGDSGQYVCRA 84
Score = 30.0 bits (66), Expect = 8.4
Identities = 58/238 (24%), Positives = 80/238 (33%), Gaps = 57/238 (23%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF-K 155
+ L DSGRY C G + + V+ +Q G L + + G T T+ C K
Sbjct: 3243 VRNLRPQDSGRYSCSFGDQTTSATLTVTALPAQFIGKLRNKEATE---GATATLRCELSK 3299
Query: 156 TENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDA 215
+ RK + D Y L I+G L + DA
Sbjct: 3300 AAPVEWRKG--------SETLRDGDRYCLRQDGAMCELQIRG------------LAMVDA 3339
Query: 216 GQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSS 275
+Y C G++ S A L ++P P LR + A A C
Sbjct: 3340 AEYSCVCGEERTS----ASL-TIRPMPAHFIGRLRHQESIEGA-------TATLRCE--- 3384
Query: 276 GENCDVVVNTLGKRAPA--FEGRILLNPQDK-----DGSF-SVVITGLRKEDAGRYLC 325
L K AP +GR L D+ DG+ + I GL DAG Y C
Sbjct: 3385 ----------LSKAAPVEWRKGRESLRDGDRHSLRQDGAVCELQICGLAVADAGEYSC 3432
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 51.6 bits (122), Expect = 3e-06
Identities = 102/456 (22%), Positives = 165/456 (36%), Gaps = 94/456 (20%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF 154
+ I LS D+G Y C G + V + P + + G T T+ C
Sbjct: 3857 LQIHGLSVADTGEYSCVCGQERTSATLTVR---APQPVFREPLQSLQAEEGSTATLQCEL 3913
Query: 155 KTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQG-TGQLLFSVVINQLRLS 213
A V+ S G + GR +QG T +L V+ L+
Sbjct: 3914 SEPTAT---------------VVWSKGGLQLQANGRREPRLQGCTAEL----VLQDLQRE 3954
Query: 214 DAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQ 273
D G+Y C G + S ++ EL ++++ T H LC +
Sbjct: 3955 DTGEYTCTCGSQATSATLTVTAAPVRFLRELQHQEVDEGGTAH-------------LCCE 4001
Query: 274 SSGENCDVVVNTLGKRAPAFEGRILLNPQDK-----DGSFS-VVITGLRKEDAGRYLCGA 327
S V +G + L P K DG+ + +++ G+ +EDAG Y C
Sbjct: 4002 LSRAGASVEWR---------KGSLQLFPCAKYQMVQDGAAAELLVRGVEQEDAGDYTCDT 4052
Query: 328 HSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGV---AGGSVAVLCPYNRKESKSIKYW 384
G Q + + P+ T ++ + G + C + ES ++ W
Sbjct: 4053 ---GHTQSMASLSV-------RVPRPKFKTRLQSLEQETGDIARLCCQLSDAESGAVVQW 4102
Query: 385 CLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN 444
L EG + P +YE R T ++++QL ++D G Y C+T
Sbjct: 4103 -LKEGVELHAGP-----------KYEMRSQ------GATRELLIHQLEAKDTGEYACVTG 4144
Query: 445 GDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQ 504
G +T +++ E E + V G V A + T F C+ S +W Q
Sbjct: 4145 GQ---KTAASLRVTEPEVTI-VRGLVDAEV--TADEDVEFSCEVSRAGATGVQW---CLQ 4195
Query: 505 ALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 540
LP Q ++ V + R+ +L L VT D G
Sbjct: 4196 GLPLQSNEVTEVAV---RDGRIHTLRLKGVTPEDAG 4228
Score = 39.7 bits (91), Expect = 0.011
Identities = 97/463 (20%), Positives = 163/463 (35%), Gaps = 89/463 (19%)
Query: 28 VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNF 87
V++V G C + H +W + G G S E ++ R L
Sbjct: 807 VDAVAGGPAQFEC----ETSEAHVHVHWYKDGMELGH----SGERFLQEDVGTRHRLV-- 856
Query: 88 PENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKV----YTVD 143
A +++ D G Y C +G +S D L VS+ + ++ +
Sbjct: 857 ---------AATVTRQDEGTYSCRVGEDS----VDFRLRVSEPKVVFAKEQLARRKLQAE 903
Query: 144 LGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLF 203
G + T++C + AQ + YK + SS V TG R
Sbjct: 904 AGASATLSC--EVAQAQTEVTWYKD-----GKKLSSSSKVCMEATGCTR----------- 945
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
+V+ Q +DAG+Y C+AG + + L V EP++V+ H + E
Sbjct: 946 RLVVQQAGQADAGEYSCEAG----GQRLSFHLDV--KEPKVVFAK---DQVAHSEVQAEA 996
Query: 264 ANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 323
A C + + +V+ GK+ + ++ + K +V+ K DAG Y
Sbjct: 997 GASATLSCEVAQAQT-EVMWYKDGKK---LSSSLKVHVEAKGCRRRLVVQQAGKTDAGDY 1052
Query: 324 LCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKY 383
C A + +F E+S V+ AG S + C + +++ Y
Sbjct: 1053 SCEARGQRVSFRLHITEPKMMFAKEQSV----HNEVQAEAGASAMLSCEVAQAQTEVTWY 1108
Query: 384 WCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT 443
++G+ + S V + +G T ++L Q DAG Y C
Sbjct: 1109 -------KDGK---KLSSSSKVGMEVKG----------CTRRLVLPQAGKADAGEYSCEA 1148
Query: 444 NGDTLWRTTVEIKIIEGE----PNLKVPGNVTAVLGETLKVPC 482
G R + + I E + V V A G T + C
Sbjct: 1149 GGQ---RVSFHLHITEPKGVFAKEQSVHNEVQAEAGTTAMLSC 1188
Score = 36.6 bits (83), Expect = 0.090
Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 92 TFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTIN 151
T V+ AQ+ DS Y C +G + V ++ LL +LG TVT+
Sbjct: 1775 TLTVHGAQVL--DSAIYSCRVGAEGQDFPVQVEEVAAKFCRLLEPV---CGELGGTVTLA 1829
Query: 152 CPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLR 211
C A+ V+ G R ++ +G + S+ + LR
Sbjct: 1830 CELSPACAE---------------VVWRCGNTQLRVGKRFQMVAEGPVR---SLTVLGLR 1871
Query: 212 LSDAGQYLCQAGDDSNSNKKNADL-QVLKPEPEL--VYEDLRGSVTFHCALGPEVANVAK 268
DAG+Y+C++ DD S + + +V+K L V + G TF C + P V
Sbjct: 1872 AEDAGEYVCESRDDHTSAQLTVSVPRVVKFMSGLSTVVAEEGGEATFQCVVSPSDVAVVW 1931
Query: 269 F 269
F
Sbjct: 1932 F 1932
Score = 35.8 bits (81), Expect = 0.15
Identities = 50/247 (20%), Positives = 94/247 (38%), Gaps = 55/247 (22%)
Query: 27 EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTN 86
EV + G S ++C T W + G + +SS V + G
Sbjct: 1083 EVQAEAGASAMLSCEV----AQAQTEVTWYKDGKK------LSSSSKVGMEVKGCTRRLV 1132
Query: 87 FPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLL-NDTKVYT---V 142
P+ G + D+G Y C G G L +++ G+ + V+
Sbjct: 1133 LPQAG----------KADAGEYSCEAG----GQRVSFHLHITEPKGVFAKEQSVHNEVQA 1178
Query: 143 DLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLL 202
+ G T ++C + Q + YK + + ++R++++G + L
Sbjct: 1179 EAGTTAMLSC--EVAQPQTEVTWYKD-------------GKKLSSSSKVRMEVKGCTRRL 1223
Query: 203 FSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP-----EPELVYEDLRGSVTFHC 257
V+ Q+ +DAG+Y C+AG + + L + +P + +LV+ ++R
Sbjct: 1224 ---VVQQVGKADAGEYSCEAG----GQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASA 1276
Query: 258 ALGPEVA 264
L EVA
Sbjct: 1277 TLSCEVA 1283
Score = 35.8 bits (81), Expect = 0.15
Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 30/200 (15%)
Query: 262 EVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAG 321
E+ K CR + + GK IL+ +D DGS ++++ L D+G
Sbjct: 6026 ELGETVKLACRVTGTPKPVISWYKDGKAVQVDPHHILI--EDPDGSCALILDSLTGVDSG 6083
Query: 322 RYLC-GAHSDGQLQEGSPI--QAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKES 378
+Y+C A + G I Q FVN+ + SP V E
Sbjct: 6084 QYMCFAASAAGNCSTLGKILVQVPPRFVNK---VRASPFV------------------EG 6122
Query: 379 KSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGF 438
+ ++ C EGA + D + L EP +G +++ + D G
Sbjct: 6123 EDAQFTCTIEGAPYPQIRWYKDGALLTTGN---KFQTLSEPRSGLLVLVIRAASKEDLGL 6179
Query: 439 YWC-LTNGDTLWRTTVEIKI 457
Y C L N R + E++I
Sbjct: 6180 YECELVNRLGSARASAELRI 6199
Score = 34.3 bits (77), Expect = 0.45
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 30/134 (22%)
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNAD------LQVLKPEPELVYEDLRGSVTFHC 257
++ ++ ++ D+ Y C+ G + + ++L+P V +L G+VT C
Sbjct: 1775 TLTVHGAQVLDSAIYSCRVGAEGQDFPVQVEEVAAKFCRLLEP----VCGELGGTVTLAC 1830
Query: 258 ALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAF-EGRILLNPQDKDGSFSVVITGLR 316
L P A V C +GKR EG + S+ + GLR
Sbjct: 1831 ELSPACAEVVW---------RCGNTQLRVGKRFQMVAEGPVR----------SLTVLGLR 1871
Query: 317 KEDAGRYLCGAHSD 330
EDAG Y+C + D
Sbjct: 1872 AEDAGEYVCESRDD 1885
Score = 32.7 bits (73), Expect = 1.3
Identities = 56/291 (19%), Positives = 108/291 (37%), Gaps = 43/291 (14%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY----TVDLGRTVTINC 152
+ Q+ + D+G Y C G G L +++ + ++ + G + T++C
Sbjct: 1225 VQQVGKADAGEYSCEAG----GQRVSFQLHITEPKAVFAKEQLVHNEVRTEAGASATLSC 1280
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
+ AQ + YK + SS V G +R +V+ Q
Sbjct: 1281 --EVAQAQTEVTWYKD-----GKKLSSSSKVRIEAAGCMR-----------QLVVQQAGQ 1322
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
+DAG+Y C+AG + + L V +P+ E L H + E +A C
Sbjct: 1323 ADAGEYTCEAG----GQRLSFHLDVSEPKAVFAKEQLA-----HRKVQAEAGAIATLSCE 1373
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQ 332
+ + +V GK+ + + + +V+ + D G Y C A +
Sbjct: 1374 VAQAQT-EVTWYKDGKK---LSSSSKVRMEAVGCTRRLVVQQACQADTGEYSCEAGGQ-R 1428
Query: 333 LQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKY 383
L + ++ +E + R V+ AG S + C + +++ + Y
Sbjct: 1429 LSFSLDVAEPKVVFAKEQPVHRE---VQAQAGASTTLSCEVAQAQTEVMWY 1476
Score = 32.3 bits (72), Expect = 1.7
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 205 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLR----GSVTFHCALG 260
++I L D+G+Y C+AG +S+ + ++ + L +DL G+ T C L
Sbjct: 3152 LLITGATLQDSGRYKCEAGGACSSSIVRVHARPVRFQEAL--KDLEVLEGGAATLRCVLS 3209
Query: 261 PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA 320
A V + G N V+ K + EG +L +V+ LR +D+
Sbjct: 3210 SVAAPV-----KWCYGNN---VLRPGDKYSLRQEGAML----------ELVVRNLRPQDS 3251
Query: 321 GRYLC 325
GRY C
Sbjct: 3252 GRYSC 3256
Score = 30.8 bits (68), Expect = 4.9
Identities = 55/239 (23%), Positives = 90/239 (37%), Gaps = 35/239 (14%)
Query: 89 ENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTV 148
E T + I+ L + DS Y C +G + S L + ++ D + V G +
Sbjct: 2966 EGLTLRLTISALEKADSDTYTCDIG---QAQSRAQLLVQGRRVHIIEDLEDVDVQEGSSA 3022
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 208
T C N + PV ++ N I D Q G + + +
Sbjct: 3023 TFRCRISPANYE------------PVHWFLDKTPLHANELNEI--DAQPGGYHVLT--LR 3066
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAK 268
QL L D+G +AGD + +A L+V + +P + +L + G ++ V
Sbjct: 3067 QLALKDSGTIYFEAGDQ----RASAALRVTE-KPSVFSRELTDATITE---GEDLTLV-- 3116
Query: 269 FLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGA 327
C S+ CD+ V K G + ++ITG +D+GRY C A
Sbjct: 3117 --CETST---CDIPV-CWTKDGKTLRGSARCQLSHEGHRAQLLITGATLQDSGRYKCEA 3169
Score = 30.8 bits (68), Expect = 4.9
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 47/217 (21%)
Query: 16 ISTKSPIFGPE--EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA--RGGCITLISSE 71
++ K +F E + EG +++ C + W + G RG +S E
Sbjct: 3091 VTEKPSVFSRELTDATITEGEDLTLVCETSTCDIP----VCWTKDGKTLRGSARCQLSHE 3146
Query: 72 GYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 131
G+ RA L I + DSGRYKC G V +
Sbjct: 3147 GH-------RAQLL-----------ITGATLQDSGRYKCEAGGACSSSIVRVHARPVRFQ 3188
Query: 132 GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRI 191
L D +V G T+ C + A PV + + P +
Sbjct: 3189 EALKDLEVLE---GGAATLRCVLSSVAA-------------PVKWCYGNNVLRPGDKYSL 3232
Query: 192 RLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNS 228
R + G +L +V+ LR D+G+Y C GD + S
Sbjct: 3233 RQE----GAML-ELVVRNLRPQDSGRYSCSFGDQTTS 3264
Score = 30.4 bits (67), Expect = 6.4
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND----TKVYTVDLGRTVTINC 152
+ Q Q +G Y C G S+ LSF L V++ + ++ + G + T++C
Sbjct: 1501 VQQAGQAVAGEYSCEAG--SQRLSFH--LHVAEPKAVFAKEQPASREVQAEAGTSATLSC 1556
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
+ AQ + YK + + ++R++ G + L V+ +
Sbjct: 1557 --EVAQAQTEVTWYKD-------------GKKLSSSSKVRMEAVGCTRRL---VVQEAGQ 1598
Query: 213 SDAGQYLCQAGDDSNS-NKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVA 264
+DAG+Y C+AGD S + A+ +V+ + + + +++ L EVA
Sbjct: 1599 ADAGEYSCKAGDQRLSFHLHVAEPKVVFAKEQPAHREVQAEAGASATLSCEVA 1651
Score = 30.0 bits (66), Expect = 8.4
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 126 EVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNP 185
+ S P L K + V +G+ T++C QI P + P
Sbjct: 5 QFSGAPRFLTRPKAFVVSVGKDATLSC---------------QIVGNPTPQVSWEKDQQP 49
Query: 186 NYTG-RIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQA 222
G R RL G L+ + I L L D+GQY+C+A
Sbjct: 50 VAAGARFRLAQDGD---LYRLTILDLALGDSGQYVCRA 84
Score = 30.0 bits (66), Expect = 8.4
Identities = 58/238 (24%), Positives = 80/238 (33%), Gaps = 57/238 (23%)
Query: 97 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF-K 155
+ L DSGRY C G + + V+ +Q G L + + G T T+ C K
Sbjct: 3243 VRNLRPQDSGRYSCSFGDQTTSATLTVTALPAQFIGKLRNKEATE---GATATLRCELSK 3299
Query: 156 TENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDA 215
+ RK + D Y L I+G L + DA
Sbjct: 3300 AAPVEWRKG--------SETLRDGDRYCLRQDGAMCELQIRG------------LAMVDA 3339
Query: 216 GQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSS 275
+Y C G++ S A L ++P P LR + A A C
Sbjct: 3340 AEYSCVCGEERTS----ASL-TIRPMPAHFIGRLRHQESIEGA-------TATLRCE--- 3384
Query: 276 GENCDVVVNTLGKRAPA--FEGRILLNPQDK-----DGSF-SVVITGLRKEDAGRYLC 325
L K AP +GR L D+ DG+ + I GL DAG Y C
Sbjct: 3385 ----------LSKAAPVEWRKGRESLRDGDRHSLRQDGAVCELQICGLAVADAGEYSC 3432
>gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo
sapiens]
Length = 1194
Score = 50.1 bits (118), Expect = 8e-06
Identities = 120/552 (21%), Positives = 206/552 (37%), Gaps = 100/552 (18%)
Query: 5 VLTCLLAVFPAISTKSPIFGPE-EVNSVEGNSVSITC----YYPPTSVNRHTRKYWCRQG 59
VL+CL AV +S + + E + EG+ ++I C Y P+ N Y
Sbjct: 7 VLSCL-AVLGVVSAQRQVTVQEGPLYRTEGSHITIWCNVSGYQGPSEQNFQWSIYLPSSP 65
Query: 60 ARGGCITLISSEGYVSSKYA-----GRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGI 114
R I + + Y G+ + N T +++I L D+G Y+C
Sbjct: 66 EREVQIVSTMDSSFPYAIYTQRVRGGKIFIERVQGNST-LLHITDLQARDAGEYECHTPS 124
Query: 115 NSRGL--SFDVSLEVSQGPGLLNDTKVYTVDLGRT----VTINCPFKTENAQKRKS---- 164
+ S+ + + P L T + L R + + C +E Q
Sbjct: 125 TDKQYFGSYSAKMNLVVIPDSLQTTAMPQT-LHRVEQDPLELTCEVASETIQHSHLSVAW 183
Query: 165 LYKQIGLYPVLVID---------SSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDA 215
L +++G PV VI SS Y G +RLD G+ F + I L+ SD
Sbjct: 184 LRQKVGEKPVEVISLSRDFMLHSSSEYAQRQSLGEVRLD--KLGRTTFRLTIFHLQPSDQ 241
Query: 216 GQYLCQAGD---DSNSN-----KKNADLQVLKPEP-----------ELVYEDLRGSVTFH 256
G++ C+A + D + + +K ++ V+ +P E + V F
Sbjct: 242 GEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETEKRLHTVGEPVEFR 301
Query: 257 CALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRI--------LLNPQDKDGSF 308
C L E NV S N ++ P L ++ D F
Sbjct: 302 CIL--EAQNVPDRYFAVSWAFNSSLIATMGPNAVPVLNSEFAHREARGQLKVAKESDSVF 359
Query: 309 SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVA 368
+ I LR+ED+G+Y C + G F+++ES P++ ++ S++
Sbjct: 360 VLKIYHLRQEDSGKYNCRVTEREKTVTGE-------FIDKESKRPKNIPIIVLPLKSSIS 412
Query: 369 VLCPYNRK---ESKSIKYWC--------------LWE--GAQNGRCPLL-VDSEGWVK-- 406
V N E + +++ C +W+ QN R ++ +D +G V+
Sbjct: 413 VEVASNASVILEGEDLRFSCSVRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRDGTVQPG 472
Query: 407 AQYEGRLSL----LEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIK-IIEGE 461
+ Y R S +E+ +F++ + D G Y C T W V+ + I GE
Sbjct: 473 SSYWERSSFGGVQMEQVQPNSFSLGIFNSRKEDEGQYECHV---TEWVRAVDGEWQIVGE 529
Query: 462 PNLKVPGNVTAV 473
P ++TA+
Sbjct: 530 RRASTPISITAL 541
Score = 30.0 bits (66), Expect = 8.4
Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 34/163 (20%)
Query: 306 GSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK----- 360
G FS+ + D+G Y C H + L SP AW E S R+ VK
Sbjct: 763 GLFSLTVQRAEVSDSGSYYC--HVEEWLL--SPNYAWYKLAEEVSG--RTEVTVKQPDSR 816
Query: 361 ---GVAGGSVAVL---------CPYNRKE--SKSIKYWCLWEG--------AQNGRCPLL 398
A G+++VL NR S+ + W +W+ A+ R
Sbjct: 817 LRLSQAQGNLSVLETRQVQLECVVLNRTSITSQLMVEWFVWKPNHPERETVARLSRDATF 876
Query: 399 VDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWC 441
E K +GRL L E P G + + + + +D+G Y C
Sbjct: 877 HYGEQAAKNNLKGRLHL-ESPSPGVYRLFIQNVAVQDSGTYSC 918
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 49.3 bits (116), Expect = 1e-05
Identities = 115/536 (21%), Positives = 191/536 (35%), Gaps = 97/536 (18%)
Query: 20 SPIFG--PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSK 77
+P+ G P N +EG +++ C + N + W + A ++ Y++ +
Sbjct: 889 APLIGISPSVANVIEGQQLTLPCTL--LAGNPIPERRWIKNSA------MLLQNPYITVR 940
Query: 78 YAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDT 137
G ++I ++ D G Y C + + S+ V P + +
Sbjct: 941 SDGS-------------LHIERVQLQDGGEYTCVASNVAGTNNKTTSVVVHVLPTIQHGQ 987
Query: 138 KVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQG 197
++ + G VT+ C K K ++ + G L+ SS + G + + G
Sbjct: 988 QILSTIEGIPVTLPC--KASGNPKPSVIWSKKG---ELISTSSAKFSAGADGSLYVVSPG 1042
Query: 198 TGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQV-LKPEPELVYEDLRG----- 251
++G+Y+C A + + K+ L V ++P V+ D RG
Sbjct: 1043 G--------------EESGEYVCTATNTAGYAKRKVQLTVYVRPR---VFGDQRGLSQDK 1085
Query: 252 SVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVV 311
V G EV C S + + F R P S S+
Sbjct: 1086 PVEISVLAGEEVT----LPCEVKSLPPPIITWAKETQLISPFSPRHTFLP-----SGSMK 1136
Query: 312 ITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLC 371
IT R D+G YLC A + G+ QA +L V+ I R P +K G V + C
Sbjct: 1137 ITETRTSDSGMYLCVATNIA----GNVTQAVKLNVHVPPKIQRGPKHLKVQVGQRVDIPC 1192
Query: 372 PYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQL 431
AQ P++ S+G +G + G T+ ++Q
Sbjct: 1193 -----------------NAQGTPLPVITWSKGGSTMLVDGEHHVSNPDG----TLSIDQA 1231
Query: 432 TSRDAGFYWCLTN---GDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKF 488
T DAG Y C+ G T+ ++ +L+ P N T FPC
Sbjct: 1232 TPSDAGIYTCVATNIAGTDETEITLHVQEPPTVEDLEPPYN-TTFQERVANQRIEFPCPA 1290
Query: 489 SSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 544
K KW + G + L ++ G ++ E+ L L + VT D G Y C
Sbjct: 1291 KGTPKPTIKWLHNG-RELTGREPG-----ISILEDGTL--LVIASVTPYDNGEYIC 1338
Score = 45.8 bits (107), Expect = 1e-04
Identities = 101/440 (22%), Positives = 162/440 (36%), Gaps = 104/440 (23%)
Query: 22 IFGP--EEVNSVEGNSVSITCY---YPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSS 76
+ GP E + V N +S+TC +PP ++ ++ +
Sbjct: 2966 VIGPKSENLTVVVNNFISLTCEVSGFPPPDLS------------------------WLKN 3001
Query: 77 KYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFD-VSLEVSQGPGLLN 135
+ + N G + I + D G Y C + IN G S SL V P + +
Sbjct: 3002 EQPIKLNTNTLIVPGGRTLQIIRAKVSDGGEYTC-IAINQAGESKKKFSLTVYVPPSIKD 3060
Query: 136 ----DTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRI 191
V V G +V++ C NA PV+ +G + T
Sbjct: 3061 HDSESLSVVNVREGTSVSLECE---SNAVPP----------PVITWYKNGRM---ITEST 3104
Query: 192 RLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL------KPEPELV 245
++I GQ+L I + +SD GQY+C+A + + + KN L V PE E++
Sbjct: 3105 HVEILADGQMLH---IKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVI 3161
Query: 246 YEDLRGSVTFHC-ALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDK 304
E + VT C A G +A +L EN D + E RIL
Sbjct: 3162 VETISNPVTLTCDATGIPPPTIA-WLKNHKRIENSD-----------SLEVRIL------ 3203
Query: 305 DGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRS--PTVVKGV 362
G + I + D+G Y C A + EG + + L + ++ + P+ V +
Sbjct: 3204 SGGSKLQIARSQHSDSGNYTCIASN----MEGKAQKYYFLSIQVPPSVAGAEIPSDVSVL 3259
Query: 363 AGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNG 422
G +V ++C N + I++ L +G K G + NG
Sbjct: 3260 LGENVELVCNANGIPTPLIQW--LKDG----------------KPIASGETERIRVSANG 3301
Query: 423 TFTVILNQLTSRDAGFYWCL 442
+ I LTS D G Y C+
Sbjct: 3302 STLNIYGALTS-DTGKYTCV 3320
Score = 40.0 bits (92), Expect = 0.008
Identities = 70/346 (20%), Positives = 138/346 (39%), Gaps = 54/346 (15%)
Query: 94 VVNIAQLSQDDSGRYKCGLGINSRGLS-FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
+++I D+G YKC + INS G + SL+V P + + V + V + C
Sbjct: 1975 IIDIESAQISDAGIYKC-VAINSAGATELFYSLQVHVAPSISGSNNMVAVVVNNPVRLEC 2033
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
+ A P L G +++ L + G++L + ++
Sbjct: 2034 EARGIPA-------------PSLTWLKDGSPVSSFSNG--LQVLSGGRIL---ALTSAQI 2075
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
SD G+Y C A + + +++ DL+V P P ++ E+ SV ++ + LC+
Sbjct: 2076 SDTGRYTCVAVNAAGEKQRDIDLRVYVP-PNIMGEEQNVSVL--------ISQAVELLCQ 2126
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQD---KDGSFSVVITGLRKEDAGRYLCGA-H 328
+ + TL +G LL + + I + +D GRY C A +
Sbjct: 2127 SDA-----IPPPTL---TWLKDGHPLLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATN 2178
Query: 329 SDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWE 388
G+ ++ + W V T + + G +++LC + ++ +W+
Sbjct: 2179 VAGKTEKNYNVNIW---VPPNIGGSDELTQLTVIEGNLISLLCESSGIPPPNL----IWK 2231
Query: 389 GAQNGRCPLLVDSEGWVKAQYEGR---LSLLEEPGNGTFTVILNQL 431
+ P+L DS G V+ GR +S+ E+ ++ + + +
Sbjct: 2232 KKGS---PVLTDSMGRVRILSGGRQLQISIAEKSDAALYSCVASNV 2274
Score = 35.0 bits (79), Expect = 0.26
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 27/147 (18%)
Query: 191 IRLDIQGTGQLLFS---VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQ-----VLKPEP 242
IRL +G G + S + I +L+ AG+Y C A + + S ++ L V++P+P
Sbjct: 3935 IRLLPRGDGYRILSSGAIEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQPQP 3994
Query: 243 ELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQ 302
++ L + C + F+ Q G N VNT G+
Sbjct: 3995 SELHVILNNPILLPC---EATGTPSPFITWQKEGIN----VNTSGRNHAVLP-------- 4039
Query: 303 DKDGSFSVVITGLRKEDAGRYLCGAHS 329
S + I+ +EDAG Y+C A +
Sbjct: 4040 ----SGGLQISRAVREDAGTYMCVAQN 4062
Score = 33.5 bits (75), Expect = 0.76
Identities = 81/362 (22%), Positives = 137/362 (37%), Gaps = 74/362 (20%)
Query: 94 VVNIAQLSQDDSGRYKCGLGINSRGLS---FDVSLEVSQGPGLLNDTKVYTVDLGRTVTI 150
V+ I D+GRY C N G + ++V++ V G ++ TV G +++
Sbjct: 2158 VLKIEDAQVQDTGRYTCE-ATNVAGKTEKNYNVNIWVPPNIGGSDELTQLTVIEGNLISL 2216
Query: 151 NCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQL 210
C ++ ++K+ G PVL + GR+R+ + G QL S+
Sbjct: 2217 LC--ESSGIPPPNLIWKKKGS-PVLT---------DSMGRVRI-LSGGRQLQISIA---- 2259
Query: 211 RLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFL 270
SDA Y C A + + + KK +LQV +R ++T + E+
Sbjct: 2260 EKSDAALYSCVASNVAGTAKKEYNLQVY----------IRPTITNSGSHPTEII------ 2303
Query: 271 CRQSSGENCDVVVNTLGKRAPAF----EGRILLNPQD---KDGSFSVVITGLRKEDAGRY 323
+ G++ + G P +G L+ + D + + + D GRY
Sbjct: 2304 --VTRGKSISLECEVQGIPPPTVTWMKDGHPLIKAKGVEILDEGHILQLKNIHVSDTGRY 2361
Query: 324 LCGAHSDGQLQEGSPIQAWQLFVNEESTI---PRSPTVVKGVAGGSVAVLCPYNRKESKS 380
+C A + G + + L V+ +I RSP + V SV++ C E+
Sbjct: 2362 VCVAVN----VAGMTDKKYDLSVHAPPSIIGNHRSPENISVVEKNSVSLTC-----EASG 2412
Query: 381 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 440
I + S W K + LS +G + L Q T DAG Y
Sbjct: 2413 IP----------------LPSITWFKDGWPVSLSNSVRILSGGRMLRLMQTTMEDAGQYT 2456
Query: 441 CL 442
C+
Sbjct: 2457 CV 2458
Score = 32.7 bits (73), Expect = 1.3
Identities = 63/256 (24%), Positives = 94/256 (36%), Gaps = 67/256 (26%)
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
S+ I + R SD+G YLC A + + + + L V P P++
Sbjct: 1134 SMKITETRTSDSGMYLCVATNIAGNVTQAVKLNVHVP--------------------PKI 1173
Query: 264 ANVAKFLCRQSSGENCDVVVNTLGKRAPAFE----GRILL-----NPQDKDGSFSVVITG 314
K L + G+ D+ N G P G +L + + DG+ S I
Sbjct: 1174 QRGPKHL-KVQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDGEHHVSNPDGTLS--IDQ 1230
Query: 315 LRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTI-----PRSPTVVKGVAGGSVAV 369
DAG Y C A + G+ L V E T+ P + T + VA +
Sbjct: 1231 ATPSDAGIYTCVATNIA----GTDETEITLHVQEPPTVEDLEPPYNTTFQERVANQRIEF 1286
Query: 370 LCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGR---LSLLEEPGNGTFTV 426
CP +IK+ NGR + GR +S+LE+ GT V
Sbjct: 1287 PCPAKGTPKPTIKW------LHNGR-------------ELTGREPGISILED---GTLLV 1324
Query: 427 ILNQLTSRDAGFYWCL 442
I + +T D G Y C+
Sbjct: 1325 IAS-VTPYDNGEYICV 1339
Score = 32.3 bits (72), Expect = 1.7
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 94 VVNIAQLSQDDSGRYKCGLGINSRG-LSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
V+ IA+ +D+GRY C + N+ G + L V + P L + K+ L TV ++
Sbjct: 1882 VLQIAKTLLEDAGRYTC-VATNAAGETQQHIQLHVHEPPSLEDAGKM----LNETVLVSN 1936
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYV-NPNYTGRIRLDIQGTGQLLFSVVINQLR 211
P + E K G PV VI + Y N +G + GQ+ + I +
Sbjct: 1937 PVQLE--------CKAAG-NPVPVI--TWYKDNRLLSGSTSMTFLNRGQI---IDIESAQ 1982
Query: 212 LSDAGQYLCQAGDDSNSNKKNADLQV 237
+SDAG Y C A + + + + LQV
Sbjct: 1983 ISDAGIYKCVAINSAGATELFYSLQV 2008
Score = 32.0 bits (71), Expect = 2.2
Identities = 56/247 (22%), Positives = 90/247 (36%), Gaps = 48/247 (19%)
Query: 90 NGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVS-LEVSQGPGLLNDTKVYTVD-LGRT 147
NG + I ++S++DSG Y C NS G + + V + P D ++ LG
Sbjct: 4308 NGHSELVIERVSKEDSGTYVC-TAENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGN 4366
Query: 148 VTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVI 207
+NC K + P + + G V+ + RIR G G L +
Sbjct: 4367 AILNCEVKGDPT-------------PTIQWNRKG-VDIEISHRIRQ--LGNGSLAIYGTV 4410
Query: 208 NQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP-----EPELVYEDLRGSVTFHCALGPE 262
N+ DAG Y C A +++ +++ L + P EP + G + +C E
Sbjct: 4411 NE----DAGDYTCVATNEAGVVERSMSLTLQSPPIITLEPVETVINAGGKIILNCQATGE 4466
Query: 263 VANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGR 322
+ RQ + D VN L S+ I +KED
Sbjct: 4467 PQPTITW-SRQGHSISWDDRVNVLSNN-------------------SLYIADAQKEDTSE 4506
Query: 323 YLCGAHS 329
+ C A +
Sbjct: 4507 FECVARN 4513
Score = 30.8 bits (68), Expect = 4.9
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 430 QLTSRDAGFYWCLTNGDT-LWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKF 488
++T D GFY C+ R + E P ++VP NVT GE + C
Sbjct: 488 KVTLSDEGFYECIAVSSAGTGRAQTFFDVSEPPPVIQVPNNVTVTPGERAVLTC-LIISA 546
Query: 489 SSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQ 548
Y W + + A P++ + N +SL L V D G Y C V
Sbjct: 547 VDYNLTWQRNDRDVRLAEPAR----IRTLAN-------LSLELKSVKFNDAGEYHCMV-S 594
Query: 549 GHFYGETAAVYVAVEE 564
A+V++ V+E
Sbjct: 595 SEGGSSAASVFLTVQE 610
Score = 30.8 bits (68), Expect = 4.9
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAK 268
Q + DAGQY C + + +K L VL P P +V E+ V K
Sbjct: 2446 QTTMEDAGQYTCVVRNAAGEERKIFGLSVLVP-PHIVGENTLEDV--------------K 2490
Query: 269 FLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDK---DGSFSVVITGLRKEDAGRYLC 325
+QS C+V N + + +G+ L + G + IT ++ GRY C
Sbjct: 2491 VKEKQSVTLTCEVTGNPVPEITWHKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTC 2550
Query: 326 GAHS 329
A S
Sbjct: 2551 LASS 2554
Score = 30.8 bits (68), Expect = 4.9
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRG---LSFDVSLEVSQGPGLLNDT-----KVYTV 142
G V+ I + +D+GRY C + +N G L +DV + V P ++ + TV
Sbjct: 2829 GGRVLQIPRAKVEDAGRYTC-VAVNEAGEDSLQYDVRVLV---PPIIKGANSDLPEEVTV 2884
Query: 143 DLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLL 202
+ ++ I C + + ++ +++ G P+L D +++ GRI L I T
Sbjct: 2885 LVNKSALIEC--LSSGSPAPRNSWQKDG-QPLLEDDHHKFLS---NGRI-LQILNT---- 2933
Query: 203 FSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
+++D G+Y+C A + + S KK +L V P
Sbjct: 2934 --------QITDIGRYVCVAENTAGSAKKYFNLNVHVP 2963
Score = 30.8 bits (68), Expect = 4.9
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 148 VTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV- 206
+T+N P + + SL + VL + G P T R + +S++
Sbjct: 3707 LTVNVPPNIKGGPQ--SLVILLNKSTVLECIAEGVPTPRITWRKDGAVLAGNHARYSILE 3764
Query: 207 -----INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
I ++D G+YLC A + + ++++ DLQV P
Sbjct: 3765 NGFLHIQSAHVTDTGRYLCMATNAAGTDRRRIDLQVHVP 3803
Score = 30.8 bits (68), Expect = 4.9
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 426 VILNQLTSRDAGFYWCLTNGDTLWRT-TVEIKIIEGEPNLKVPGNVTAVLGETLKVPC 482
+IL + D+GFY C+ N T TV + + ++PG+V+ GE L++ C
Sbjct: 4224 LILENVVLEDSGFYTCVANNAAGEDTHTVSLTVHVLPTFTELPGDVSLNKGEQLRLSC 4281
Score = 30.4 bits (67), Expect = 6.4
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%)
Query: 90 NGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDV-SLEVSQGPGLL--NDTKVYTVDLGR 146
N ++ + + + +D+GRY C IN G S +++V P ++ N +V L R
Sbjct: 1411 NNGKILKLFRATPEDAGRYSCK-AINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNR 1469
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV 206
V + C K +P + G P + G +++ GQ+L
Sbjct: 1470 DVALECQVKGTP-------------FPDIHWFKDG--KPLFLGDPNVELLDRGQVLH--- 1511
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
+ R +D G+Y C + + K+ L + P
Sbjct: 1512 LKNARRNDKGRYQCTVSNAAGKQAKDIKLTIYIP 1545
>gi|7657359 contactin 5 isoform long [Homo sapiens]
Length = 1100
Score = 47.0 bits (110), Expect = 7e-05
Identities = 80/327 (24%), Positives = 122/327 (37%), Gaps = 54/327 (16%)
Query: 65 ITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGL-SFDV 123
IT + GY+ SK R + V+ I + DD+G Y+C NSRG SF
Sbjct: 332 ITWMKVNGYIPSKARLRKSQA--------VLEIPNVQLDDAGIYEC-RAENSRGKNSFRG 382
Query: 124 SLEVSQGP---GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 180
L+V P LNDT+ +D G + C + + L + L P ++
Sbjct: 383 QLQVYTYPHWVEKLNDTQ---LDSGSPLRWECKATGKPRPTYRWLKNGVPLSPQSRVEMV 439
Query: 181 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
V ++I+ + SDAG Y C A + + +A+L++L
Sbjct: 440 NGV---------------------LMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 478
Query: 241 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 300
P L+ ++ EV K G + G RA RI +
Sbjct: 479 APTFALNQLKKTII--VTKDQEVVIECK-----PQGSPKPTISWKKGDRAVRENKRIAIL 531
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK 360
P DGS ++ K D G+Y+C G+ GS L V E + I +P +
Sbjct: 532 P---DGSLRIL--NASKSDEGKYVC----RGENVFGSAEIIASLSVKEPTRIELTPKRTE 582
Query: 361 GVAGGSVAVLCPYNRKESKSIK-YWCL 386
G S+ + C S + YW L
Sbjct: 583 LTVGESIVLNCKAIHDASLDVTFYWTL 609
>gi|28373129 contactin 5 isoform short [Homo sapiens]
Length = 1026
Score = 47.0 bits (110), Expect = 7e-05
Identities = 80/327 (24%), Positives = 122/327 (37%), Gaps = 54/327 (16%)
Query: 65 ITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGL-SFDV 123
IT + GY+ SK R + V+ I + DD+G Y+C NSRG SF
Sbjct: 258 ITWMKVNGYIPSKARLRKSQA--------VLEIPNVQLDDAGIYEC-RAENSRGKNSFRG 308
Query: 124 SLEVSQGP---GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 180
L+V P LNDT+ +D G + C + + L + L P ++
Sbjct: 309 QLQVYTYPHWVEKLNDTQ---LDSGSPLRWECKATGKPRPTYRWLKNGVPLSPQSRVEMV 365
Query: 181 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
V ++I+ + SDAG Y C A + + +A+L++L
Sbjct: 366 NGV---------------------LMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 404
Query: 241 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 300
P L+ ++ EV K G + G RA RI +
Sbjct: 405 APTFALNQLKKTII--VTKDQEVVIECK-----PQGSPKPTISWKKGDRAVRENKRIAIL 457
Query: 301 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK 360
P DGS ++ K D G+Y+C G+ GS L V E + I +P +
Sbjct: 458 P---DGSLRIL--NASKSDEGKYVC----RGENVFGSAEIIASLSVKEPTRIELTPKRTE 508
Query: 361 GVAGGSVAVLCPYNRKESKSIK-YWCL 386
G S+ + C S + YW L
Sbjct: 509 LTVGESIVLNCKAIHDASLDVTFYWTL 535
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 46.6 bits (109), Expect = 9e-05
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 20/156 (12%)
Query: 85 TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDL 144
T FPE G F+ + LS DSG Y C + S +E+ P + + V +
Sbjct: 2437 TQFPERGRFL-QLQALSTADSGDYSCTARNAAGSTSVAFRVEIHTVPTIRSGPPAVNVSV 2495
Query: 145 GRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 204
+T + C Q P ++ P R +I G L
Sbjct: 2496 NQTALLPC---------------QADGVPAPLVSWRKDRVPLDPRSPRFEILPEGSLRIQ 2540
Query: 205 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
V+ Q DAG YLC A + + S+++ DL+VL+P
Sbjct: 2541 PVLAQ----DAGHYLCLASNSAGSDRQGRDLRVLEP 2572
Score = 45.4 bits (106), Expect = 2e-04
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 185 PNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
P G L +Q GQ+L I + D G+Y C A + ++ L+V P P +
Sbjct: 257 PVLPGGPHLQVQEDGQVLR---ITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAP-PTI 312
Query: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDK 304
+ G V ++ + LC ++ G P +
Sbjct: 313 WGSNETGEVAVM------EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTR---- 362
Query: 305 DGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRS---PTVVKG 361
G + + + DAG Y C A + G+ +A +L V TI + P VVK
Sbjct: 363 -GGRQLQLGRAQSSDAGVYTCKASN----AVGAAEKATRLDVYVPPTIEGAGGRPYVVKA 417
Query: 362 VAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGN 421
VAG VA+ C S ++ + + P+ +E + + +G + LE PG
Sbjct: 418 VAGRPVALECVARGHPSPTLSW-------HHEGLPVAESNES--RLETDGSVLRLESPGE 468
Query: 422 GTFTVILNQLTSRDAGFYWCLTN---GDTLWRTTVEIKIIEGEPNLKVP---GNVTAVLG 475
+ +G Y C+ + G+ + + +VE+++ P L V G VT ++G
Sbjct: 469 AS------------SGLYSCVASSPAGEAVLQYSVEVQV---PPQLLVAEGLGQVTTIVG 513
Query: 476 ETLKVPC 482
+ L++PC
Sbjct: 514 QPLELPC 520
Score = 38.5 bits (88), Expect = 0.024
Identities = 87/404 (21%), Positives = 145/404 (35%), Gaps = 74/404 (18%)
Query: 123 VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 182
+S + QGP L ++ V G + T +C +E + R+ Q+ + I+ SG
Sbjct: 2257 LSQSLEQGPSL----QLEAVGAGDSGTYSCVAVSEAGEARRHF--QLTVMEPPHIEDSGQ 2310
Query: 183 -----VNPNYTGRIRLDIQGT----------GQLLFSVVINQ-----LRLSDAGQYLCQA 222
+ P + D QGT GQ L + N LR+ DAG Y C A
Sbjct: 2311 PTELSLTPGAPMELLCDAQGTPQPNITWHKDGQALTRLENNSRATRVLRVRDAGLYTCLA 2370
Query: 223 GDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVV 282
+ + +K+ ++V P P +V GP L C V
Sbjct: 2371 ESPAGAIEKSFRVRVQAP-PNIV--------------GPRGPRFVVGLAPGQLVLECSVE 2415
Query: 283 VNTLGKRAPAFEGRIL---LNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPI 339
K +G +L + Q + + + L D+G Y C A + GS
Sbjct: 2416 AEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARN----AAGSTS 2471
Query: 340 QAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 399
A+++ ++ TI P V + + C + + + + + R PL
Sbjct: 2472 VAFRVEIHTVPTIRSGPPAVNVSVNQTALLPCQADGVPAPLVSW-------RKDRVPLDP 2524
Query: 400 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL-TNGDTLWRTTVEIKII 458
S R +L E ++ + + ++DAG Y CL +N R +++++
Sbjct: 2525 RSP---------RFEILPEG-----SLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLRVL 2570
Query: 459 EGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 502
E P N+T T P PC+ S K W G
Sbjct: 2571 EPPAIAPSPSNLTL----TAHTPALLPCEASGSPKPLVVWWKDG 2610
Score = 37.4 bits (85), Expect = 0.053
Identities = 90/393 (22%), Positives = 151/393 (38%), Gaps = 69/393 (17%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC-- 152
+ IA S +D+G Y C + NS G + + V Q P ++ + DL T +
Sbjct: 2811 LRIAHASPEDAGNYLC-IAKNSAGSAMGKTRLVVQVPPVIENG---LPDLSTTEGSHAFL 2866
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
P K + + P + D G G+ IQ +G+LL + L
Sbjct: 2867 PCKARGSPE-----------PNITWDKDGQPVSGAEGKFT--IQPSGELL----VKNLEG 2909
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
DAG Y C A + ++ L +L V+ L G + LG + +L
Sbjct: 2910 QDAGTYTCTAENAVGRARRRVHLTILVLP---VFTTLPGDRSLR--LGDRL-----WLRC 2959
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-G 331
+ G + T+ R P EG ++DG ++ + +ED+G Y+C A + G
Sbjct: 2960 AARGSPTPRIGWTVNDR-PVTEG-----VSEQDGGSTLQRAAVSREDSGTYVCWAENRVG 3013
Query: 332 QLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQ 391
+ Q S + + V + +V+ V G SI+ C+ G
Sbjct: 3014 RTQAVSFVHVKEAPVLQGEAF---SYLVEPVGG---------------SIQLDCVVRGDP 3055
Query: 392 NGRCPLLVDSEGWVKAQYEGRLS-LLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWR 450
V W+K R S L + NG+ T+ ++ DAG Y CL +
Sbjct: 3056 -------VPDIHWIKDGLPLRGSHLRHQLQNGSLTI--HRTERDDAGRYQCLAENEMGVA 3106
Query: 451 TTVEIKIIEGEPNLKV-PGNVTAVLGETLKVPC 482
V I +++ P +V P ++T G+ + + C
Sbjct: 3107 KKVVILVLQSAPVFQVEPQDMTVRSGDDVALRC 3139
Score = 35.4 bits (80), Expect = 0.20
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 34/239 (14%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDT--KVYTVDLGRTV 148
G +++ + Q + DSG Y C + + S+EV P + N+ +V V G+T
Sbjct: 1213 GGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTA 1272
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 208
+ C T + Q + + +K L + +++P+ G LL +
Sbjct: 1273 HLMCNV-TGHPQPKLTWFKD---GRPLARGDAHHISPD------------GVLL---QVL 1313
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL--VYEDLRGSVTFHCALGPEVANV 266
Q LS AG Y C A + K+ L VL L + VT V N
Sbjct: 1314 QANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV------TVNNP 1367
Query: 267 AKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+C + + ++ T K FE N Q G+ + I +KEDAG+Y C
Sbjct: 1368 ISLICEALAFPSPNI---TWMKDGAPFEAS--RNIQLLPGTHGLQILNAQKEDAGQYTC 1421
Score = 35.0 bits (79), Expect = 0.26
Identities = 96/416 (23%), Positives = 152/416 (36%), Gaps = 77/416 (18%)
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTG-RIRLDIQGTGQLLFSV 205
T+T+ P EN K +++ + G VL D SG P T + R+ ++ + + V
Sbjct: 1926 TLTVQVPPTFENP-KTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSA--VHGV 1982
Query: 206 V-------INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVT---F 255
V +++L+ + AG Y C A + +K+ + VL V +R S
Sbjct: 1983 VSRGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVL------VAPRIRSSGVAREH 2036
Query: 256 HCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGL 315
H G EV + C DV G G L D S+V+ GL
Sbjct: 2037 HVLEGQEV----RLDCEADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGG---SLVLKGL 2089
Query: 316 RKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNR 375
R DAG Y C AH+ E + + + V PT+ +G G V P
Sbjct: 2090 RASDAGAYTCVAHNPA--GEDARLHTVNVLV--------PPTIKQGADGSGTLVSRP--- 2136
Query: 376 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 435
+ + C G+ P+ V W+K LS T+ ++++ D
Sbjct: 2137 --GELVTMVCPVRGSP----PIHV---SWLKDGLPLPLSQRTLLHGSGHTLRISKVQLAD 2187
Query: 436 AGFYWCLT---NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCH---FPCKFS 489
AG + C+ G T+++++ ++ +V V G +++PC P
Sbjct: 2188 AGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVPLPLV 2247
Query: 490 SYEKYWCKWNNTGCQAL-PSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 544
S W G L S ++GP SL L V D G Y C
Sbjct: 2248 S-------WMKDGEPLLSQSLEQGP--------------SLQLEAVGAGDSGTYSC 2282
Score = 33.5 bits (75), Expect = 0.76
Identities = 45/179 (25%), Positives = 68/179 (37%), Gaps = 17/179 (9%)
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANV 266
I Q +LSDAG Y C A + + S + L+V P + L G V V
Sbjct: 752 IEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVL--------VNTP 803
Query: 267 AKFLCRQSSGENCDVVVNTLGKR-APAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+ C + + ++ G +PA + + P G + + R D+GRY C
Sbjct: 804 VRLTCNATGAPSPTLMWLKDGNPVSPAGTPGLQVFP----GGRVLTLASARASDSGRYSC 859
Query: 326 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYW 384
A S G Q L V+ +I V VA SVA+ C + + +W
Sbjct: 860 VAVS----AVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWW 914
Score = 33.1 bits (74), Expect = 0.99
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 44 PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 103
P VN R GA + + VS AG L FP G V+ +A
Sbjct: 797 PVLVNTPVRLTCNATGAPSPTLMWLKDGNPVSP--AGTPGLQVFP--GGRVLTLASARAS 852
Query: 104 DSGRYKCGLGINSRGLS-FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
DSGRY C + +++ G DV L+V P +L + +V +V + C
Sbjct: 853 DSGRYSC-VAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALEC 901
Score = 33.1 bits (74), Expect = 0.99
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 29/177 (16%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY----TVDLGR 146
G V+ I + +++GRY C L V P +L DT+ TV+
Sbjct: 1611 GGRVLQIPLVRAENAGRYSCKASNEVGEDWLHYELLVLTPPVILGDTEELVEEVTVNASS 1670
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV 206
TV++ CP L + P +P RL + GQ+L
Sbjct: 1671 TVSLQCPALGNPVPTISWLQNGLPFSP----------SP------RLQVLEDGQVL---Q 1711
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP------EPELVYEDLRGSVTFHC 257
++ ++DA Y+C A + + S +K L+V P + E V L SV+ C
Sbjct: 1712 VSTAEVADAASYMCVAENQAGSAEKLFTLRVQVPPRIAGLDLEQVTAILNSSVSLPC 1768
Score = 31.6 bits (70), Expect = 2.9
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 174 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLS-----DAGQYLCQAGDDSNS 228
+L ++SG P T + TG + QLR++ DAG YLC A + + S
Sbjct: 2775 LLPCEASGIPRPTITWQKEGLNVATGVSTQVLPGGQLRIAHASPEDAGNYLCIAKNSAGS 2834
Query: 229 NKKNADLQV-LKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLG 287
L V + P E DL + H L C+ ++ + G
Sbjct: 2835 AMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLP----------CKARGSPEPNITWDKDG 2884
Query: 288 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHS 329
+ EG+ + P S +++ L +DAG Y C A +
Sbjct: 2885 QPVSGAEGKFTIQP-----SGELLVKNLEGQDAGTYTCTAEN 2921
Score = 30.0 bits (66), Expect = 8.4
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 175 LVIDSSGYVNPNYTGRIRLDIQGTGQLLF------SVVINQLRLSDAGQYLCQAGDDSNS 228
L D + NP T G+ +F ++ + + RLSD+G Y C+A + +
Sbjct: 1766 LPCDVHAHPNPEVTWYKDSQALSLGEEVFLLPGTHTLQLGRARLSDSGMYTCEALNAAGR 1825
Query: 229 NKKNADLQVLKP 240
++K L VL P
Sbjct: 1826 DQKLVQLSVLVP 1837
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 46.6 bits (109), Expect = 9e-05
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 20/156 (12%)
Query: 85 TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDL 144
T FPE G F+ + LS DSG Y C + S +E+ P + + V +
Sbjct: 3628 TQFPERGRFL-QLQALSTADSGDYSCTARNAAGSTSVAFRVEIHTVPTIRSGPPAVNVSV 3686
Query: 145 GRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 204
+T + C Q P ++ P R +I G L
Sbjct: 3687 NQTALLPC---------------QADGVPAPLVSWRKDRVPLDPRSPRFEILPEGSLRIQ 3731
Query: 205 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
V+ Q DAG YLC A + + S+++ DL+VL+P
Sbjct: 3732 PVLAQ----DAGHYLCLASNSAGSDRQGRDLRVLEP 3763
Score = 45.4 bits (106), Expect = 2e-04
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 185 PNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
P G L +Q GQ+L I + D G+Y C A + ++ L+V P P +
Sbjct: 1448 PVLPGGPHLQVQEDGQVLR---ITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAP-PTI 1503
Query: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDK 304
+ G V ++ + LC ++ G P +
Sbjct: 1504 WGSNETGEVAVM------EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTR---- 1553
Query: 305 DGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRS---PTVVKG 361
G + + + DAG Y C A + G+ +A +L V TI + P VVK
Sbjct: 1554 -GGRQLQLGRAQSSDAGVYTCKASN----AVGAAEKATRLDVYVPPTIEGAGGRPYVVKA 1608
Query: 362 VAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGN 421
VAG VA+ C S ++ + + P+ +E + + +G + LE PG
Sbjct: 1609 VAGRPVALECVARGHPSPTLSW-------HHEGLPVAESNES--RLETDGSVLRLESPGE 1659
Query: 422 GTFTVILNQLTSRDAGFYWCLTN---GDTLWRTTVEIKIIEGEPNLKVP---GNVTAVLG 475
+ +G Y C+ + G+ + + +VE+++ P L V G VT ++G
Sbjct: 1660 AS------------SGLYSCVASSPAGEAVLQYSVEVQV---PPQLLVAEGLGQVTTIVG 1704
Query: 476 ETLKVPC 482
+ L++PC
Sbjct: 1705 QPLELPC 1711
Score = 43.9 bits (102), Expect = 6e-04
Identities = 86/402 (21%), Positives = 153/402 (38%), Gaps = 71/402 (17%)
Query: 86 NFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLG 145
+F E+G I + S+ + G Y+C + + V+ P L TV G
Sbjct: 472 HFQESGNSSWEILRASKAEEGTYECTAVSRAGTGRAKAQIVVTDPPPQLVPAPNVTVSPG 531
Query: 146 RTVTINCPFKTENAQKRKSLYKQIGLYPV-LVIDSSGYVNPNYTGRIRLDIQGTGQLL-F 203
T ++C + +G P L V P TGR+ QL
Sbjct: 532 ETAVLSC--------------RVLGEAPYNLTWVRDWRVLPASTGRV-------AQLADL 570
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
S+ I+ + +D G+Y C A + + + + L V + ++ + H + G EV
Sbjct: 571 SLEISGIIPTDGGRYQCVASNANGVTRASVWLLVREAPQVSIHTSSQ-----HFSQGVEV 625
Query: 264 ANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 323
K C +SG + + +A + RI ++ Q +++I G+ EDAG Y
Sbjct: 626 ----KVSC-SASGYPTPHISWSRESQALQEDSRIHVDAQG-----TLIIQGVAPEDAGNY 675
Query: 324 LCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKY 383
C A + + G+ + L+ + ++ VV G ++C + +
Sbjct: 676 SCQATN----EVGTDQETVTLYYTDPPSVSAVNAVVLVAVGEEAVLVCEASGVPPPRV-- 729
Query: 384 WCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEP-GNGTFTVILNQLTSRDAGFYWCL 442
+W Y G L ++ P G+ + + + RDAG Y C
Sbjct: 730 --IW---------------------YRGGLEMILAPEGSSSGKLRIPAAQERDAGTYTCR 766
Query: 443 TNGDTLWRTTVEIKIIEGE-PNL-KVPGNVTAVLGETLKVPC 482
+ L + EI++ G P L ++P +VT LG + + C
Sbjct: 767 AVNE-LGDASAEIQLAVGHAPQLTELPRDVTVELGRSALLAC 807
Score = 40.8 bits (94), Expect = 0.005
Identities = 102/462 (22%), Positives = 162/462 (35%), Gaps = 77/462 (16%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF 154
+ +AQ+ DSG Y+C + S L V P + +V V +G + +NC
Sbjct: 1084 LRLAQVQVGDSGHYECTASNPAGSASHRYVLGVQVPPQVQPGPRVLKVLVGEALDLNCVA 1143
Query: 155 KTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSD 214
+ P L G V +QG G SV +R SD
Sbjct: 1144 EGNPE-------------PQLSWSKDGVV-----------LQGRGPQ-GSVHFAAIRTSD 1178
Query: 215 AGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQS 274
AG+Y C+A + + + +L+VL+P P ++ G L +
Sbjct: 1179 AGRYRCEASNSAGVDAWEVELRVLEP-PHWGADETSG------------------LLERV 1219
Query: 275 SGENCDVVVNTLGKRAPAFEGRILLNPQDKDG--------SFSVVITGLRKEDAGRYLCG 326
+GEN + G P R + + G S+ + + D+G Y C
Sbjct: 1220 AGENASLPCPARGTPKPQVTWRKGPSSEPLHGQPGVAVLEEGSLFLASVSPADSGDYECQ 1279
Query: 327 AHSDGQLQEGSPIQAWQLFVNEESTIPRS--PTVVKGVAGGSVAVLCPYNRKESKSIKYW 384
A + + GS + +L V +I V G+AG S+ + C N I
Sbjct: 1280 ATN----EVGSTSRRAKLVVYVPPSIREDGRKANVSGMAGQSLTLECDANGFPVPEI--- 1332
Query: 385 CLW-EGAQNGRCPLLVDSEGWVKAQYE-GRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL 442
+W + AQ PL GW + G LL+E + F ++ D+G Y C
Sbjct: 1333 -VWLKDAQLVGVPLGWAGYGWDLGWGQVGGHRLLDEGQSLHFP----RIQEGDSGLYSCR 1387
Query: 443 TNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 502
++ P++ G VLG C S +W
Sbjct: 1388 AENQAGTAQRDFHLLVLTPPSVLGAGAAQEVLG-LAGADVELQCWTSGVPTPQVEWTKDR 1446
Query: 503 CQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 544
LP GP + E+ +++ +T + V DEG Y C
Sbjct: 1447 QPVLPG---GP---HLQVQEDGQVLRITGSHV--GDEGRYQC 1480
Score = 38.5 bits (88), Expect = 0.024
Identities = 87/404 (21%), Positives = 145/404 (35%), Gaps = 74/404 (18%)
Query: 123 VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 182
+S + QGP L ++ V G + T +C +E + R+ Q+ + I+ SG
Sbjct: 3448 LSQSLEQGPSL----QLEAVGAGDSGTYSCVAVSEAGEARRHF--QLTVMEPPHIEDSGQ 3501
Query: 183 -----VNPNYTGRIRLDIQGT----------GQLLFSVVINQ-----LRLSDAGQYLCQA 222
+ P + D QGT GQ L + N LR+ DAG Y C A
Sbjct: 3502 PTELSLTPGAPMELLCDAQGTPQPNITWHKDGQALTRLENNSRATRVLRVRDAGLYTCLA 3561
Query: 223 GDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVV 282
+ + +K+ ++V P P +V GP L C V
Sbjct: 3562 ESPAGAIEKSFRVRVQAP-PNIV--------------GPRGPRFVVGLAPGQLVLECSVE 3606
Query: 283 VNTLGKRAPAFEGRIL---LNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPI 339
K +G +L + Q + + + L D+G Y C A + GS
Sbjct: 3607 AEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARN----AAGSTS 3662
Query: 340 QAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 399
A+++ ++ TI P V + + C + + + + + R PL
Sbjct: 3663 VAFRVEIHTVPTIRSGPPAVNVSVNQTALLPCQADGVPAPLVSW-------RKDRVPLDP 3715
Query: 400 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL-TNGDTLWRTTVEIKII 458
S R +L E ++ + + ++DAG Y CL +N R +++++
Sbjct: 3716 RSP---------RFEILPEG-----SLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLRVL 3761
Query: 459 EGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 502
E P N+T T P PC+ S K W G
Sbjct: 3762 EPPAIAPSPSNLTL----TAHTPALLPCEASGSPKPLVVWWKDG 3801
Score = 37.4 bits (85), Expect = 0.053
Identities = 90/393 (22%), Positives = 151/393 (38%), Gaps = 69/393 (17%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC-- 152
+ IA S +D+G Y C + NS G + + V Q P ++ + DL T +
Sbjct: 4002 LRIAHASPEDAGNYLC-IAKNSAGSAMGKTRLVVQVPPVIENG---LPDLSTTEGSHAFL 4057
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
P K + + P + D G G+ IQ +G+LL + L
Sbjct: 4058 PCKARGSPE-----------PNITWDKDGQPVSGAEGKFT--IQPSGELL----VKNLEG 4100
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
DAG Y C A + ++ L +L V+ L G + LG + +L
Sbjct: 4101 QDAGTYTCTAENAVGRARRRVHLTILVLP---VFTTLPGDRSLR--LGDRL-----WLRC 4150
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-G 331
+ G + T+ R P EG ++DG ++ + +ED+G Y+C A + G
Sbjct: 4151 AARGSPTPRIGWTVNDR-PVTEG-----VSEQDGGSTLQRAAVSREDSGTYVCWAENRVG 4204
Query: 332 QLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQ 391
+ Q S + + V + +V+ V G SI+ C+ G
Sbjct: 4205 RTQAVSFVHVKEAPVLQGEAF---SYLVEPVGG---------------SIQLDCVVRGDP 4246
Query: 392 NGRCPLLVDSEGWVKAQYEGRLS-LLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWR 450
V W+K R S L + NG+ T+ ++ DAG Y CL +
Sbjct: 4247 -------VPDIHWIKDGLPLRGSHLRHQLQNGSLTI--HRTERDDAGRYQCLAENEMGVA 4297
Query: 451 TTVEIKIIEGEPNLKV-PGNVTAVLGETLKVPC 482
V I +++ P +V P ++T G+ + + C
Sbjct: 4298 KKVVILVLQSAPVFQVEPQDMTVRSGDDVALRC 4330
Score = 35.4 bits (80), Expect = 0.20
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 34/239 (14%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDT--KVYTVDLGRTV 148
G +++ + Q + DSG Y C + + S+EV P + N+ +V V G+T
Sbjct: 2404 GGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTA 2463
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 208
+ C T + Q + + +K L + +++P+ G LL +
Sbjct: 2464 HLMCNV-TGHPQPKLTWFKD---GRPLARGDAHHISPD------------GVLL---QVL 2504
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL--VYEDLRGSVTFHCALGPEVANV 266
Q LS AG Y C A + K+ L VL L + VT V N
Sbjct: 2505 QANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV------TVNNP 2558
Query: 267 AKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+C + + ++ T K FE N Q G+ + I +KEDAG+Y C
Sbjct: 2559 ISLICEALAFPSPNI---TWMKDGAPFEAS--RNIQLLPGTHGLQILNAQKEDAGQYTC 2612
Score = 35.0 bits (79), Expect = 0.26
Identities = 96/416 (23%), Positives = 152/416 (36%), Gaps = 77/416 (18%)
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTG-RIRLDIQGTGQLLFSV 205
T+T+ P EN K +++ + G VL D SG P T + R+ ++ + + V
Sbjct: 3117 TLTVQVPPTFENP-KTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSA--VHGV 3173
Query: 206 V-------INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVT---F 255
V +++L+ + AG Y C A + +K+ + VL V +R S
Sbjct: 3174 VSRGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVL------VAPRIRSSGVAREH 3227
Query: 256 HCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGL 315
H G EV + C DV G G L D S+V+ GL
Sbjct: 3228 HVLEGQEV----RLDCEADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGG---SLVLKGL 3280
Query: 316 RKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNR 375
R DAG Y C AH+ E + + + V PT+ +G G V P
Sbjct: 3281 RASDAGAYTCVAHNPA--GEDARLHTVNVLV--------PPTIKQGADGSGTLVSRP--- 3327
Query: 376 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 435
+ + C G+ P+ V W+K LS T+ ++++ D
Sbjct: 3328 --GELVTMVCPVRGSP----PIHV---SWLKDGLPLPLSQRTLLHGSGHTLRISKVQLAD 3378
Query: 436 AGFYWCLT---NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCH---FPCKFS 489
AG + C+ G T+++++ ++ +V V G +++PC P
Sbjct: 3379 AGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVPLPLV 3438
Query: 490 SYEKYWCKWNNTGCQAL-PSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 544
S W G L S ++GP SL L V D G Y C
Sbjct: 3439 S-------WMKDGEPLLSQSLEQGP--------------SLQLEAVGAGDSGTYSC 3473
Score = 34.3 bits (77), Expect = 0.45
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 57/288 (19%)
Query: 204 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEV 263
S+ + Q+++ D+G Y C A + + S L V P P++ GP
Sbjct: 1083 SLRLAQVQVGDSGHYECTASNPAGSASHRYVLGVQVP-PQV-------------QPGP-- 1126
Query: 264 ANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 323
V K L ++ NC N + + + +G +L Q + SV +R DAGRY
Sbjct: 1127 -RVLKVLVGEALDLNCVAEGNPEPQLSWSKDGVVL---QGRGPQGSVHFAAIRTSDAGRY 1182
Query: 324 LCGAHSDGQLQEGSPIQAW--QLFVNEESTIPRSPT--VVKGVAGGSVAVLCPYNRKESK 379
C A + + AW +L V E T +++ VAG + ++ CP
Sbjct: 1183 RCEA------SNSAGVDAWEVELRVLEPPHWGADETSGLLERVAGENASLPCP------- 1229
Query: 380 SIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGR--LSLLEEPGNGTFTVILNQLTSRDAG 437
A+ P + +G G+ +++LEE ++ L ++ D+G
Sbjct: 1230 ----------ARGTPKPQVTWRKGPSSEPLHGQPGVAVLEEG-----SLFLASVSPADSG 1274
Query: 438 FYWCLTNGDTLWRTTVEIKIIEGEPNLKVPG---NVTAVLGETLKVPC 482
Y C + + ++ P+++ G NV+ + G++L + C
Sbjct: 1275 DYECQATNEVGSTSRRAKLVVYVPPSIREDGRKANVSGMAGQSLTLEC 1322
Score = 33.5 bits (75), Expect = 0.76
Identities = 45/179 (25%), Positives = 68/179 (37%), Gaps = 17/179 (9%)
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANV 266
I Q +LSDAG Y C A + + S + L+V P + L G V V
Sbjct: 1943 IEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVL--------VNTP 1994
Query: 267 AKFLCRQSSGENCDVVVNTLGKR-APAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+ C + + ++ G +PA + + P G + + R D+GRY C
Sbjct: 1995 VRLTCNATGAPSPTLMWLKDGNPVSPAGTPGLQVFP----GGRVLTLASARASDSGRYSC 2050
Query: 326 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYW 384
A S G Q L V+ +I V VA SVA+ C + + +W
Sbjct: 2051 VAVS----AVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWW 2105
Score = 33.1 bits (74), Expect = 0.99
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 44 PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 103
P VN R GA + + VS AG L FP G V+ +A
Sbjct: 1988 PVLVNTPVRLTCNATGAPSPTLMWLKDGNPVSP--AGTPGLQVFP--GGRVLTLASARAS 2043
Query: 104 DSGRYKCGLGINSRGLS-FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
DSGRY C + +++ G DV L+V P +L + +V +V + C
Sbjct: 2044 DSGRYSC-VAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALEC 2092
Score = 33.1 bits (74), Expect = 0.99
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 29/177 (16%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY----TVDLGR 146
G V+ I + +++GRY C L V P +L DT+ TV+
Sbjct: 2802 GGRVLQIPLVRAENAGRYSCKASNEVGEDWLHYELLVLTPPVILGDTEELVEEVTVNASS 2861
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV 206
TV++ CP L + P +P RL + GQ+L
Sbjct: 2862 TVSLQCPALGNPVPTISWLQNGLPFSP----------SP------RLQVLEDGQVL---Q 2902
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP------EPELVYEDLRGSVTFHC 257
++ ++DA Y+C A + + S +K L+V P + E V L SV+ C
Sbjct: 2903 VSTAEVADAASYMCVAENQAGSAEKLFTLRVQVPPRIAGLDLEQVTAILNSSVSLPC 2959
Score = 31.6 bits (70), Expect = 2.9
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 174 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLS-----DAGQYLCQAGDDSNS 228
+L ++SG P T + TG + QLR++ DAG YLC A + + S
Sbjct: 3966 LLPCEASGIPRPTITWQKEGLNVATGVSTQVLPGGQLRIAHASPEDAGNYLCIAKNSAGS 4025
Query: 229 NKKNADLQV-LKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLG 287
L V + P E DL + H L C+ ++ + G
Sbjct: 4026 AMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLP----------CKARGSPEPNITWDKDG 4075
Query: 288 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHS 329
+ EG+ + P S +++ L +DAG Y C A +
Sbjct: 4076 QPVSGAEGKFTIQP-----SGELLVKNLEGQDAGTYTCTAEN 4112
Score = 31.2 bits (69), Expect = 3.8
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRG-L 119
RGG +++ EG S K + I + D+G Y C +N G
Sbjct: 733 RGGLEMILAPEGSSSGK-----------------LRIPAAQERDAGTYTCR-AVNELGDA 774
Query: 120 SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
S ++ L V P L + TV+LGR+ + C
Sbjct: 775 SAEIQLAVGHAPQLTELPRDVTVELGRSALLAC 807
Score = 30.0 bits (66), Expect = 8.4
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 175 LVIDSSGYVNPNYTGRIRLDIQGTGQLLF------SVVINQLRLSDAGQYLCQAGDDSNS 228
L D + NP T G+ +F ++ + + RLSD+G Y C+A + +
Sbjct: 2957 LPCDVHAHPNPEVTWYKDSQALSLGEEVFLLPGTHTLQLGRARLSDSGMYTCEALNAAGR 3016
Query: 229 NKKNADLQVLKP 240
++K L VL P
Sbjct: 3017 DQKLVQLSVLVP 3028
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 46.6 bits (109), Expect = 9e-05
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 20/156 (12%)
Query: 85 TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDL 144
T FPE G F+ + LS DSG Y C + S +E+ P + + V +
Sbjct: 2346 TQFPERGRFL-QLQALSTADSGDYSCTARNAAGSTSVAFRVEIHTVPTIRSGPPAVNVSV 2404
Query: 145 GRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 204
+T + C Q P ++ P R +I G L
Sbjct: 2405 NQTALLPC---------------QADGVPAPLVSWRKDRVPLDPRSPRFEILPEGSLRIQ 2449
Query: 205 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 240
V+ Q DAG YLC A + + S+++ DL+VL+P
Sbjct: 2450 PVLAQ----DAGHYLCLASNSAGSDRQGRDLRVLEP 2481
Score = 45.4 bits (106), Expect = 2e-04
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 52/307 (16%)
Query: 185 PNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 244
P G L +Q GQ+L I + D G+Y C A + ++ L+V P P +
Sbjct: 166 PVLPGGPHLQVQEDGQVLR---ITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAP-PTI 221
Query: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDK 304
+ G V ++ + LC ++ G P +
Sbjct: 222 WGSNETGEVAVM------EDHLVQLLCEARGVPTPNITWFKDGALLPTSTKVVYTR---- 271
Query: 305 DGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRS---PTVVKG 361
G + + + DAG Y C A + G+ +A +L V TI + P VVK
Sbjct: 272 -GGRQLQLGRAQSSDAGVYTCKASN----AVGAAEKATRLDVYVPPTIEGAGGRPYVVKA 326
Query: 362 VAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGN 421
VAG VA+ C S ++ + + P+ +E + + +G + LE PG
Sbjct: 327 VAGRPVALECVARGHPSPTLSW-------HHEGLPVAESNES--RLETDGSVLRLESPGE 377
Query: 422 GTFTVILNQLTSRDAGFYWCLTN---GDTLWRTTVEIKIIEGEPNLKVP---GNVTAVLG 475
+ +G Y C+ + G+ + + +VE+++ P L V G VT ++G
Sbjct: 378 AS------------SGLYSCVASSPAGEAVLQYSVEVQV---PPQLLVAEGLGQVTTIVG 422
Query: 476 ETLKVPC 482
+ L++PC
Sbjct: 423 QPLELPC 429
Score = 38.5 bits (88), Expect = 0.024
Identities = 87/404 (21%), Positives = 145/404 (35%), Gaps = 74/404 (18%)
Query: 123 VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 182
+S + QGP L ++ V G + T +C +E + R+ Q+ + I+ SG
Sbjct: 2166 LSQSLEQGPSL----QLEAVGAGDSGTYSCVAVSEAGEARRHF--QLTVMEPPHIEDSGQ 2219
Query: 183 -----VNPNYTGRIRLDIQGT----------GQLLFSVVINQ-----LRLSDAGQYLCQA 222
+ P + D QGT GQ L + N LR+ DAG Y C A
Sbjct: 2220 PTELSLTPGAPMELLCDAQGTPQPNITWHKDGQALTRLENNSRATRVLRVRDAGLYTCLA 2279
Query: 223 GDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVV 282
+ + +K+ ++V P P +V GP L C V
Sbjct: 2280 ESPAGAIEKSFRVRVQAP-PNIV--------------GPRGPRFVVGLAPGQLVLECSVE 2324
Query: 283 VNTLGKRAPAFEGRIL---LNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPI 339
K +G +L + Q + + + L D+G Y C A + GS
Sbjct: 2325 AEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARN----AAGSTS 2380
Query: 340 QAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 399
A+++ ++ TI P V + + C + + + + + R PL
Sbjct: 2381 VAFRVEIHTVPTIRSGPPAVNVSVNQTALLPCQADGVPAPLVSW-------RKDRVPLDP 2433
Query: 400 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCL-TNGDTLWRTTVEIKII 458
S R +L E ++ + + ++DAG Y CL +N R +++++
Sbjct: 2434 RSP---------RFEILPEG-----SLRIQPVLAQDAGHYLCLASNSAGSDRQGRDLRVL 2479
Query: 459 EGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 502
E P N+T T P PC+ S K W G
Sbjct: 2480 EPPAIAPSPSNLTL----TAHTPALLPCEASGSPKPLVVWWKDG 2519
Score = 37.0 bits (84), Expect = 0.069
Identities = 90/393 (22%), Positives = 150/393 (38%), Gaps = 69/393 (17%)
Query: 95 VNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC-- 152
+ IA S +D+G Y C + NS G + + V Q P ++ + DL T +
Sbjct: 2720 LRIAHASPEDAGNYLC-IAKNSAGSAMGKTRLVVQVPPVIENG---LPDLSTTEGSHAFL 2775
Query: 153 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL 212
P K + + P + D G G+ IQ +G+LL + L
Sbjct: 2776 PCKARGSPE-----------PNITWDKDGQPVSGAEGKFT--IQPSGELL----VKNLEG 2818
Query: 213 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCR 272
DAG Y C A + ++ L +L V+ L G + LG + +L
Sbjct: 2819 QDAGTYTCTAENAVGRARRRVHLTILVLP---VFTTLPGDRSLR--LGDRL-----WLRC 2868
Query: 273 QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-G 331
+ G + T+ R P EG ++DG ++ + +ED+G Y+C A + G
Sbjct: 2869 AARGSPTPRIGWTVNDR-PVTEG-----VSEQDGGSTLQRAAVSREDSGTYVCWAENRVG 2922
Query: 332 QLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQ 391
+ Q S + + V + +V+ V G SI+ C+ G
Sbjct: 2923 RTQAVSFVHVKEAPVLQGEAF---SYLVEPVGG---------------SIQLDCVVRGDP 2964
Query: 392 NGRCPLLVDSEGWVKAQYEGRLS-LLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWR 450
V W+K R S L + NG+ T+ + DAG Y CL +
Sbjct: 2965 -------VPDIHWIKDGLPLRGSHLRHQLQNGSLTI--RRTERDDAGRYQCLAENEMGVA 3015
Query: 451 TTVEIKIIEGEPNLKV-PGNVTAVLGETLKVPC 482
V I +++ P +V P ++T G+ + + C
Sbjct: 3016 KKVVILVLQSAPVFQVEPQDMTVRSGDDVALRC 3048
Score = 35.4 bits (80), Expect = 0.20
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 34/239 (14%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDT--KVYTVDLGRTV 148
G +++ + Q + DSG Y C + + S+EV P + N+ +V V G+T
Sbjct: 1122 GGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDGQTA 1181
Query: 149 TINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVIN 208
+ C T + Q + + +K L + +++P+ G LL +
Sbjct: 1182 HLMCNV-TGHPQPKLTWFKD---GRPLARGDAHHISPD------------GVLL---QVL 1222
Query: 209 QLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL--VYEDLRGSVTFHCALGPEVANV 266
Q LS AG Y C A + K+ L VL L + VT V N
Sbjct: 1223 QANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTV------TVNNP 1276
Query: 267 AKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+C + + ++ T K FE N Q G+ + I +KEDAG+Y C
Sbjct: 1277 ISLICEALAFPSPNI---TWMKDGAPFEAS--RNIQLLPGTHGLQILNAQKEDAGQYTC 1330
Score = 35.0 bits (79), Expect = 0.26
Identities = 96/416 (23%), Positives = 152/416 (36%), Gaps = 77/416 (18%)
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTG-RIRLDIQGTGQLLFSV 205
T+T+ P EN K +++ + G VL D SG P T + R+ ++ + + V
Sbjct: 1835 TLTVQVPPTFENP-KTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSA--VHGV 1891
Query: 206 V-------INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVT---F 255
V +++L+ + AG Y C A + +K+ + VL V +R S
Sbjct: 1892 VSRGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVL------VAPRIRSSGVAREH 1945
Query: 256 HCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGL 315
H G EV + C DV G G L D S+V+ GL
Sbjct: 1946 HVLEGQEV----RLDCEADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGG---SLVLKGL 1998
Query: 316 RKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNR 375
R DAG Y C AH+ E + + + V PT+ +G G V P
Sbjct: 1999 RASDAGAYTCVAHNPA--GEDARLHTVNVLV--------PPTIKQGADGSGTLVSRP--- 2045
Query: 376 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 435
+ + C G+ P+ V W+K LS T+ ++++ D
Sbjct: 2046 --GELVTMVCPVRGSP----PIHV---SWLKDGLPLPLSQRTLLHGSGHTLRISKVQLAD 2096
Query: 436 AGFYWCLT---NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCH---FPCKFS 489
AG + C+ G T+++++ ++ +V V G +++PC P
Sbjct: 2097 AGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVPLPLV 2156
Query: 490 SYEKYWCKWNNTGCQAL-PSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 544
S W G L S ++GP SL L V D G Y C
Sbjct: 2157 S-------WMKDGEPLLSQSLEQGP--------------SLQLEAVGAGDSGTYSC 2191
Score = 33.5 bits (75), Expect = 0.76
Identities = 45/179 (25%), Positives = 68/179 (37%), Gaps = 17/179 (9%)
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANV 266
I Q +LSDAG Y C A + + S + L+V P + L G V V
Sbjct: 661 IEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVL--------VNTP 712
Query: 267 AKFLCRQSSGENCDVVVNTLGKR-APAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLC 325
+ C + + ++ G +PA + + P G + + R D+GRY C
Sbjct: 713 VRLTCNATGAPSPTLMWLKDGNPVSPAGTPGLQVFP----GGRVLTLASARASDSGRYSC 768
Query: 326 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYW 384
A S G Q L V+ +I V VA SVA+ C + + +W
Sbjct: 769 VAVS----AVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLSWW 823
Score = 33.1 bits (74), Expect = 0.99
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 44 PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 103
P VN R GA + + VS AG L FP G V+ +A
Sbjct: 706 PVLVNTPVRLTCNATGAPSPTLMWLKDGNPVSP--AGTPGLQVFP--GGRVLTLASARAS 761
Query: 104 DSGRYKCGLGINSRGLS-FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 152
DSGRY C + +++ G DV L+V P +L + +V +V + C
Sbjct: 762 DSGRYSC-VAVSAVGEDRQDVVLQVHMPPSILGEELNVSVVANESVALEC 810
Score = 33.1 bits (74), Expect = 0.99
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 29/177 (16%)
Query: 91 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY----TVDLGR 146
G V+ I + +++GRY C L V P +L DT+ TV+
Sbjct: 1520 GGRVLQIPLVRAENAGRYSCKASNEVGEDWLHYELLVLTPPVILGDTEELVEEVTVNASS 1579
Query: 147 TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVV 206
TV++ CP L + P +P RL + GQ+L
Sbjct: 1580 TVSLQCPALGNPVPTISWLQNGLPFSP----------SP------RLQVLEDGQVL---Q 1620
Query: 207 INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP------EPELVYEDLRGSVTFHC 257
++ ++DA Y+C A + + S +K L+V P + E V L SV+ C
Sbjct: 1621 VSTAEVADAASYMCVAENQAGSAEKLFTLRVQVPPRIAGLDLEQVTAILNSSVSLPC 1677
Score = 31.6 bits (70), Expect = 2.9
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 21/162 (12%)
Query: 174 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLS-----DAGQYLCQAGDDSNS 228
+L ++SG P T + TG + QLR++ DAG YLC A + + S
Sbjct: 2684 LLPCEASGIPRPTITWQKEGLNVATGVSTQVLPGGQLRIAHASPEDAGNYLCIAKNSAGS 2743
Query: 229 NKKNADLQV-LKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLG 287
L V + P E DL + H L C+ ++ + G
Sbjct: 2744 AMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLP----------CKARGSPEPNITWDKDG 2793
Query: 288 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHS 329
+ EG+ + P S +++ L +DAG Y C A +
Sbjct: 2794 QPVSGAEGKFTIQP-----SGELLVKNLEGQDAGTYTCTAEN 2830
Score = 30.0 bits (66), Expect = 8.4
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 175 LVIDSSGYVNPNYTGRIRLDIQGTGQLLF------SVVINQLRLSDAGQYLCQAGDDSNS 228
L D + NP T G+ +F ++ + + RLSD+G Y C+A + +
Sbjct: 1675 LPCDVHAHPNPEVTWYKDSQALSLGEEVFLLPGTHTLQLGRARLSDSGMYTCEALNAAGR 1734
Query: 229 NKKNADLQVLKP 240
++K L VL P
Sbjct: 1735 DQKLVQLSVLVP 1746
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 45.8 bits (107), Expect = 1e-04
Identities = 85/405 (20%), Positives = 147/405 (36%), Gaps = 82/405 (20%)
Query: 181 GYVNPNYT---GRIRLDIQGTGQ-LLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQ 236
G+ P+Y + L++ G Q + ++I +R SD+G Y+C+ + + K L
Sbjct: 250 GHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENIRPSDSGSYVCEVSNRYGTAKVIGRLY 309
Query: 237 VLKP-----EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAP 291
V +P P V + V+ C+ V T +
Sbjct: 310 VKQPLKATISPRKVKSSVGSQVSLSCS-----------------------VTGTEDQELS 346
Query: 292 AFEGRILLNPQDKDGSFSVVITGLR----------KEDAGRYLCGAHSDGQLQEGSPIQA 341
+ +LNP +V ITG+ K D G Y C D +L +Q
Sbjct: 347 WYRNGEILNP-----GKNVRITGINHENLIMDHMVKSDGGAYQCFVRKD-KLSAQDYVQV 400
Query: 342 WQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDS 401
V E+ T K ++ S V+ P ++ + C +G +D
Sbjct: 401 ----VLEDGT-------PKIISAFSEKVVSP-----AEPVSLMCNVKGTPLPTITWTLDD 444
Query: 402 EGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTN---GDTLWRTTVEIKII 458
+ +K ++ GN + ++ RD G Y C N G L++ + ++
Sbjct: 445 DPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVR-- 502
Query: 459 EGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFV 518
G +++ N+TA+ G + C+ Y Y KW LP AF
Sbjct: 503 -GPASIRPMKNITAIAGR----DTYIHCRVIGYPYYSIKWYKNS-NLLPFNHR--QVAF- 553
Query: 519 NCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVE 563
EN+ + L+ ++ DEG Y C V + +V+V V+
Sbjct: 554 ---ENNGTLKLS-DVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVK 594
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,879,050
Number of Sequences: 37866
Number of extensions: 1303637
Number of successful extensions: 4720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 3576
Number of HSP's gapped (non-prelim): 1118
length of query: 764
length of database: 18,247,518
effective HSP length: 110
effective length of query: 654
effective length of database: 14,082,258
effective search space: 9209796732
effective search space used: 9209796732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.