Guide to the Human Genome
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Name: SESN3 Sequence: fasta or formatted (492aa) NCBI GI: 31377591
Description:

sestrin 3

Referenced in:

Oxygen Sensing and Hemoglobin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         27           3
 C cysteine            1.4          7           1
 D aspartate           5.3         26           2
 E glutamate           8.7         43           2
 F phenylalanine       4.7         23           1
 G glycine             4.7         23           3
 H histidine           3.9         19           1
 I isoleucine          4.5         22           2
 K lysine              4.1         20           2
 L leucine            10.8         53           3
 M methionine          3.5         17           1
 N asparagine          5.9         29           2
 P proline             3.3         16           1
 Q glutamine           2.8         14           1
 R arginine            7.3         36           2
 S serine              6.7         33           1
 T threonine           5.3         26           2
 V valine              5.9         29           2
 W tryptophan          1.0          5           1
 Y tyrosine            4.9         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sestrin 3 
SESN1                 0.601   sestrin 1 
SESN2                 0.504   sestrin 2 
EHMT2                 0.012   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.012   euchromatic histone-lysine N-methyltransferase 2 is...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.011   guanine nucleotide binding protein-like 3 isoform 1 ...
MCM3                  0.009   minichromosome maintenance complex component 3 
VPRBP                 0.008   HIV-1 Vpr binding protein 
CASC1                 0.008   cancer susceptibility candidate 1 isoform b 
CASC1                 0.008   cancer susceptibility candidate 1 isoform c 
CASC1                 0.008   cancer susceptibility candidate 1 isoform a 
MPHOSPH10             0.008   M-phase phosphoprotein 10 
HUWE1                 0.008   HECT, UBA and WWE domain containing 1 
BAT2L                 0.008   HLA-B associated transcript 2-like 
MAP7D3                0.008   MAP7 domain containing 3 
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
IFFO1                 0.007   intermediate filament family orphan isoform 2 
IFFO1                 0.007   intermediate filament family orphan isoform 4 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.007   cell division cycle 2-like 2 isoform 1 
GON4L                 0.007   gon-4-like isoform a 
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.007   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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