CASC1 3058

Name: CASC1	Sequence: fasta or formatted (722aa)		NCBI GI: 131888105
Description: cancer susceptibility candidate 1 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {716aa} cancer susceptibility candidate 1 isoform b alt prot {690aa} cancer susceptibility candidate 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 34 2 C cysteine 1.5 11 1 D aspartate 3.6 26 2 E glutamate 13.9 100 4 F phenylalanine 3.9 28 2 G glycine 2.6 19 2 H histidine 2.8 20 1 I isoleucine 5.8 42 2 K lysine 9.3 67 4 L leucine 10.9 79 3 M methionine 2.1 15 1 N asparagine 3.7 27 2 P proline 3.9 28 2 Q glutamine 3.9 28 2 R arginine 3.9 28 2 S serine 6.9 50 2 T threonine 5.5 40 2 V valine 7.2 52 3 W tryptophan 1.7 12 1 Y tyrosine 2.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cancer susceptibility candidate 1 isoform a CASC1 0.990 cancer susceptibility candidate 1 isoform b CASC1 0.870 cancer susceptibility candidate 1 isoform c EIF5B 0.023 eukaryotic translation initiation factor 5B GCC2 0.021 GRIP and coiled-coil domain-containing 2 LOC727832 0.021 golgi autoantigen, golgin subfamily a-like LOC283685 0.021 PREDICTED: golgi autoantigen, golgin subfamily a-li... CALD1 0.018 caldesmon 1 isoform 1 FHAD1 0.018 forkhead-associated (FHA) phosphopeptide binding do... MYO10 0.017 myosin X HAP1 0.017 huntingtin-associated protein 1 isoform 2 INCENP 0.017 inner centromere protein antigens 135/155kDa isofor... INCENP 0.017 inner centromere protein antigens 135/155kDa isofor... ITSN1 0.016 intersectin 1 isoform ITSN-s ITSN1 0.016 intersectin 1 isoform ITSN-l CSPP1 0.016 centrosome spindle pole associated protein 1 isofor... CSPP1 0.016 centrosome spindle pole associated protein 1 isofor... LOC100133220 0.016 PREDICTED: hypothetical protein LOC100294088 0.016 PREDICTED: hypothetical protein, partial AKAP9 0.016 A-kinase anchor protein 9 isoform 2 CLIP1 0.016 restin isoform b CLIP1 0.016 restin isoform a CCDC18 0.016 sarcoma antigen NY-SAR-41 WDR87 0.015 NYD-SP11 protein DCTN1 0.015 dynactin 1 isoform 4 DCTN1 0.015 dynactin 1 isoform 3 DCTN1 0.015 dynactin 1 isoform 2 DCTN1 0.015 dynactin 1 isoform 1 MYO6 0.015 myosin VI GOLGA4 0.015 golgi autoantigen, golgin subfamily a, 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.