Guide to the Human Genome
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Name: PIP5K1C Sequence: fasta or formatted (668aa) NCBI GI: 31317309
Description:

phosphatidylinositol-4-phosphate 5-kinase, type I, gamma

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         63           3
 C cysteine            0.7          5           1
 D aspartate           5.5         37           2
 E glutamate           8.7         58           2
 F phenylalanine       4.0         27           2
 G glycine             7.0         47           2
 H histidine           2.1         14           2
 I isoleucine          3.7         25           2
 K lysine              5.5         37           2
 L leucine             8.2         55           3
 M methionine          1.9         13           1
 N asparagine          1.9         13           2
 P proline             6.7         45           2
 Q glutamine           4.3         29           2
 R arginine            5.1         34           3
 S serine              9.7         65           2
 T threonine           5.7         38           2
 V valine              5.4         36           3
 W tryptophan          0.4          3           1
 Y tyrosine            3.6         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol-4-phosphate 5-kinase, type I, g... 
PIP5K1A               0.503   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1A               0.500   phosphatidylinositol-4-phosphate 5-kinase, type I, al...
PIP5K1A               0.485   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1B               0.481   phosphatidylinositol-4-phosphate 5-kinase, type I, be...
PIP5K1A               0.457   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP4K2C               0.109   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.109   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2B               0.109   phosphatidylinositol-5-phosphate 4-kinase, type II, b...
PIP4K2C               0.104   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2A               0.103   phosphatidylinositol-5-phosphate 4-kinase, type II, a...
PIP4K2C               0.087   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP5KL1               0.058   phosphatidylinositol-4-phosphate 5-kinase-like 1 is...
PIKFYVE               0.025   phosphatidylinositol-3-phosphate 5-kinase type III ...
PIP5KL1               0.022   phosphatidylinositol-4-phosphate 5-kinase-like 1 iso...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform a ...
RP1L1                 0.012   retinitis pigmentosa 1-like 1 
BIN2                  0.012   bridging integrator 2 
FSCB                  0.012   fibrous sheath CABYR binding protein 
ACAN                  0.011   aggrecan isoform 2 precursor 
IWS1                  0.011   IWS1 homolog 
ACAN                  0.011   aggrecan isoform 1 precursor 
MAGEC1                0.010   melanoma antigen family C, 1 
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform c ...
CDGAP                 0.010   Cdc42 GTPase-activating protein 
LOC100292339          0.009   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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