| Name: CLN8 | Sequence: fasta or formatted (286aa) | NCBI GI: 31083053 | |
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Description: ceroid-lipofuscinosis, neuronal 8
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Referenced in: Lysosomes and Related Organelles
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.7 22 2 C cysteine 2.4 7 1 D aspartate 3.1 9 1 E glutamate 2.4 7 1 F phenylalanine 7.7 22 2 G glycine 6.3 18 2 H histidine 4.5 13 2 I isoleucine 2.8 8 2 K lysine 3.1 9 2 L leucine 15.4 44 3 M methionine 3.1 9 1 N asparagine 3.8 11 1 P proline 3.1 9 1 Q glutamine 3.5 10 2 R arginine 3.5 10 1 S serine 6.3 18 3 T threonine 6.3 18 2 V valine 7.0 20 2 W tryptophan 5.2 15 2 Y tyrosine 2.4 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 ceroid-lipofuscinosis, neuronal 8 TLCD2 0.034 PREDICTED: TLC domain containing 2 TLCD2 0.034 PREDICTED: hypothetical protein TLCD2 0.034 PREDICTED: TLC domain containing 2 TMEM56 0.033 transmembrane protein 56 FAM57B 0.022 hypothetical protein LOC83723 FAM57A 0.021 family with sequence similarity 57, member A OR51A2 0.010 olfactory receptor, family 51, subfamily A, member 2... OR51A4 0.010 olfactory receptor, family 51, subfamily A, member 4... LPCAT3 0.009 lysophosphatidylcholine acyltransferase 3 TAF1A 0.009 TBP-associated factor 1A isoform 1 TAF1A 0.009 TBP-associated factor 1A isoform 2 OR51A7 0.005 olfactory receptor, family 51, subfamily A, member 7...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
