TAF1A 13323

Name: TAF1A	Sequence: fasta or formatted (336aa)		NCBI GI: 21536362
Description: TBP-associated factor 1A isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [450aa] TBP-associated factor 1A isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 23 1 C cysteine 0.9 3 1 D aspartate 3.9 13 2 E glutamate 6.0 20 2 F phenylalanine 4.5 15 1 G glycine 4.8 16 1 H histidine 3.6 12 2 I isoleucine 5.4 18 1 K lysine 11.0 37 2 L leucine 11.9 40 3 M methionine 2.7 9 1 N asparagine 6.0 20 1 P proline 2.4 8 1 Q glutamine 3.0 10 1 R arginine 4.5 15 1 S serine 6.2 21 2 T threonine 3.0 10 1 V valine 4.5 15 1 W tryptophan 3.3 11 2 Y tyrosine 6.0 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor 1A isoform 2 TAF1A 1.000 TBP-associated factor 1A isoform 1 CLN8 0.007 ceroid-lipofuscinosis, neuronal 8 DIS3 0.007 DIS3 mitotic control isoform b DIS3 0.007 DIS3 mitotic control isoform a MRPS27 0.006 mitochondrial ribosomal protein S27 SNX14 0.004 sorting nexin 14 isoform b SNX14 0.004 sorting nexin 14 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.