HNF4A 25345

Name: HNF4A	Sequence: fasta or formatted (464aa)		NCBI GI: 31077207
Description: hepatocyte nuclear factor 4 alpha isoform a		Referenced in: Liver Nuclear Receptors
Other entries for this name: alt prot [474aa] hepatocyte nuclear factor 4 alpha isoform b alt prot [417aa] hepatocyte nuclear factor 4 alpha isoform c alt prot [395aa] hepatocyte nuclear factor 4 alpha isoform f alt prot [452aa] hepatocyte nuclear factor 4 alpha isoform d alt prot [442aa] hepatocyte nuclear factor 4 alpha isoform e
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 33 2 C cysteine 2.6 12 1 D aspartate 6.0 28 2 E glutamate 5.4 25 1 F phenylalanine 2.8 13 2 G glycine 5.8 27 2 H histidine 2.6 12 2 I isoleucine 5.8 27 2 K lysine 5.4 25 2 L leucine 11.2 52 5 M methionine 3.4 16 1 N asparagine 3.7 17 1 P proline 6.0 28 2 Q glutamine 5.0 23 1 R arginine 5.8 27 2 S serine 8.2 38 2 T threonine 4.3 20 2 V valine 5.6 26 2 W tryptophan 0.4 2 1 Y tyrosine 2.8 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatocyte nuclear factor 4 alpha isoform a HNF4A 0.990 hepatocyte nuclear factor 4 alpha isoform b HNF4A 0.919 hepatocyte nuclear factor 4 alpha isoform e HNF4A 0.909 hepatocyte nuclear factor 4 alpha isoform d HNF4A 0.805 hepatocyte nuclear factor 4 alpha isoform c HNF4A 0.724 hepatocyte nuclear factor 4 alpha isoform f HNF4G 0.691 hepatocyte nuclear factor 4, gamma RXRA 0.265 retinoid X receptor, alpha RXRB 0.260 retinoid X receptor, beta RXRG 0.258 retinoid X receptor, gamma isoform a NR2F6 0.225 nuclear receptor subfamily 2, group F, member 6 [Hom... NR2F2 0.219 nuclear receptor subfamily 2, group F, member 2 isof... NR2F1 0.214 nuclear receptor subfamily 2, group F, member 1 [Homo... NR2E3 0.175 photoreceptor-specific nuclear receptor isoform b [Ho... ESRRB 0.174 estrogen-related receptor beta ESRRG 0.169 estrogen-related receptor gamma isoform 2 ESRRG 0.169 estrogen-related receptor gamma isoform 2 ESRRG 0.169 estrogen-related receptor gamma isoform 1 ESRRG 0.169 estrogen-related receptor gamma isoform 2 NR2E1 0.168 nuclear receptor subfamily 2, group E, member 1 [Homo... RARB 0.158 retinoic acid receptor, beta isoform 1 ESRRA 0.151 estrogen-related receptor alpha RARA 0.150 retinoic acid receptor, alpha isoform 1 RARA 0.150 retinoic acid receptor, alpha isoform 2 RARA 0.150 retinoic acid receptor, alpha isoform 1 RARG 0.150 retinoic acid receptor, gamma isoform 1 RARG 0.149 retinoic acid receptor, gamma isoform 2 NR2E3 0.143 photoreceptor-specific nuclear receptor isoform a [Ho... NR4A2 0.132 nuclear receptor subfamily 4, group A, member 2 [Homo... THRB 0.131 thyroid hormone receptor, beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.