Guide to the Human Genome
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Name: NR2E1 Sequence: fasta or formatted (385aa) NCBI GI: 4507537
Description:

nuclear receptor subfamily 2, group E, member 1

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         38           3
 C cysteine            3.4         13           1
 D aspartate           3.6         14           1
 E glutamate           5.2         20           2
 F phenylalanine       4.2         16           2
 G glycine             5.2         20           2
 H histidine           2.3          9           1
 I isoleucine          4.7         18           2
 K lysine              5.7         22           2
 L leucine            10.1         39           5
 M methionine          1.8          7           1
 N asparagine          3.6         14           1
 P proline             5.5         21           1
 Q glutamine           4.4         17           1
 R arginine            6.5         25           2
 S serine              8.1         31           2
 T threonine           6.5         25           2
 V valine              6.0         23           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor subfamily 2, group E, member 1 [Homo... 
NR2E3                 0.372   photoreceptor-specific nuclear receptor isoform b [Ho...
NR2F1                 0.315   nuclear receptor subfamily 2, group F, member 1 [Homo...
NR2F2                 0.306   nuclear receptor subfamily 2, group F, member 2 isof...
NR2E3                 0.302   photoreceptor-specific nuclear receptor isoform a [Ho...
NR2F6                 0.295   nuclear receptor subfamily 2, group F, member 6 [Hom...
RXRA                  0.254   retinoid X receptor, alpha 
RXRG                  0.247   retinoid X receptor, gamma isoform a 
RXRB                  0.242   retinoid X receptor, beta 
HNF4G                 0.212   hepatocyte nuclear factor 4, gamma 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform f 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.203   hepatocyte nuclear factor 4 alpha isoform d 
ESRRB                 0.187   estrogen-related receptor beta 
ESRRG                 0.186   estrogen-related receptor gamma isoform 2 
ESRRG                 0.186   estrogen-related receptor gamma isoform 2 
ESRRG                 0.186   estrogen-related receptor gamma isoform 1 
ESRRG                 0.186   estrogen-related receptor gamma isoform 2 
NR2F2                 0.179   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.179   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.179   nuclear receptor subfamily 2, group F, member 2 iso...
ESR1                  0.174   estrogen receptor alpha isoform 4 
ESR1                  0.174   estrogen receptor alpha isoform 3 
ESR1                  0.174   estrogen receptor alpha isoform 2 
ESR1                  0.174   estrogen receptor alpha isoform 1 
ESR2                  0.166   estrogen receptor beta isoform 1 
ESRRA                 0.163   estrogen-related receptor alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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