SNRNP35 25342

Name: SNRNP35	Sequence: fasta or formatted (251aa)		NCBI GI: 31077198
Description: small nuclear ribonucleoprotein 35kDa (U11/U12) isoform b		Referenced in: Capping and Splicing
Other entries for this name: alt prot [246aa] small nuclear ribonucleoprotein 35kDa (U11/U12) isoform a alt mRNA [251aa] small nuclear ribonucleoprotein 35kDa (U11/U12) isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 11 1 C cysteine 0.0 0 0 D aspartate 10.0 25 2 E glutamate 8.8 22 2 F phenylalanine 3.2 8 1 G glycine 8.4 21 3 H histidine 1.6 4 1 I isoleucine 4.4 11 1 K lysine 8.4 21 2 L leucine 7.6 19 2 M methionine 1.6 4 1 N asparagine 2.8 7 1 P proline 4.8 12 1 Q glutamine 1.6 4 1 R arginine 15.9 40 2 S serine 2.8 7 1 T threonine 2.8 7 1 V valine 5.2 13 2 W tryptophan 2.8 7 1 Y tyrosine 3.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 1.000 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 0.978 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP70 0.253 U1 small nuclear ribonucleoprotein 70 kDa PPIL4 0.100 peptidylprolyl isomerase-like 4 SFRS2 0.082 splicing factor, arginine/serine-rich 2 TRA2A 0.074 transformer-2 alpha RBMXL3 0.070 RNA binding motif protein, X-linked-like 3 SFRS2B 0.068 splicing factor, arginine/serine-rich 2B CSTF2T 0.058 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... RBM19 0.058 RNA binding motif protein 19 RBM19 0.058 RNA binding motif protein 19 RBM19 0.058 RNA binding motif protein 19 CSTF2 0.058 cleavage stimulation factor subunit 2 NCL 0.058 nucleolin U2AF2 0.056 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofo... U2AF2 0.056 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... RBMX2 0.056 RNA binding motif protein, X-linked 2 ELAVL3 0.054 ELAV-like protein 3 isoform 1 ELAVL3 0.054 ELAV-like protein 3 isoform 2 RBMXL1 0.054 RNA binding motif protein, X-linked-like 1 RBMXL1 0.054 RNA binding motif protein, X-linked-like 1 LOC100288788 0.052 PREDICTED: similar to RNA binding motif protein, X-... LOC100288788 0.052 PREDICTED: hypothetical protein XP_002343863 TRA2B 0.052 splicing factor, arginine/serine-rich 10 RBMX 0.052 RNA binding motif protein, X-linked ZC3H18 0.052 zinc finger CCCH-type containing 18 RBM39 0.050 RNA binding motif protein 39 isoform b RBM39 0.050 RNA binding motif protein 39 isoform a RBM3 0.050 RNA binding motif protein 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.