Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 30089966
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30089966 CDC42 effector protein 5 [Homo sapiens]
(148 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30089966 CDC42 effector protein 5 [Homo sapiens] 309 6e-85
gi|23238226 CDC42 effector protein 1 [Homo sapiens] 76 1e-14
gi|13786127 Cdc42 effector protein 4 [Homo sapiens] 70 5e-13
gi|5802998 Cdc42 effector protein 2 [Homo sapiens] 52 2e-07
gi|19923356 Cdc42 effector protein 3 [Homo sapiens] 45 2e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 4e-05
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 44 4e-05
gi|120587019 zinc finger protein 318 [Homo sapiens] 44 4e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 44 6e-05
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 44 6e-05
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 43 1e-04
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 43 1e-04
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 43 1e-04
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 43 1e-04
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ... 42 1e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 42 1e-04
gi|56549694 enabled homolog isoform a [Homo sapiens] 42 2e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 42 2e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 41 3e-04
gi|22027541 programmed cell death 7 [Homo sapiens] 41 3e-04
gi|153792074 proline rich 12 [Homo sapiens] 41 3e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 41 4e-04
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 41 4e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 40 5e-04
gi|52485606 formin-like 2 [Homo sapiens] 40 5e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 40 0.001
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.001
gi|115334682 SNAP25-interacting protein [Homo sapiens] 40 0.001
gi|124107614 PR domain containing 13 [Homo sapiens] 40 0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.001
>gi|30089966 CDC42 effector protein 5 [Homo sapiens]
Length = 148
Score = 309 bits (791), Expect = 6e-85
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MPVLKQLGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEP 60
MPVLKQLGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEP
Sbjct: 1 MPVLKQLGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEP 60
Query: 61 RAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPD 120
RAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPD
Sbjct: 61 RAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPD 120
Query: 121 AEPRPGTQPPQARCRPNADLELNDVIGL 148
AEPRPGTQPPQARCRPNADLELNDVIGL
Sbjct: 121 AEPRPGTQPPQARCRPNADLELNDVIGL 148
>gi|23238226 CDC42 effector protein 1 [Homo sapiens]
Length = 391
Score = 75.9 bits (185), Expect = 1e-14
Identities = 39/76 (51%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 23 ISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPR--------SPPPP 74
IS PLGDFRHT+HVGRGGD FGDTSFLS HGG R+P + + PP
Sbjct: 38 ISHPLGDFRHTMHVGRGGDVFGDTSFLSNHGGSSGSTHRSPRSFLAKKLQLVRRVGAPPR 97
Query: 75 AVPQSAAPSPADPLLS 90
+ APSPA P +S
Sbjct: 98 RMASPPAPSPAPPAIS 113
Score = 41.2 bits (95), Expect = 3e-04
Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 68 PRSPPPP------AVPQSAAPSPADPLLSFHLDL--GPSMLDAVLGVMDAARPEAAAAKP 119
PRS P + P +D LLSF LDL GPS+L +LGVM + PEA AA+
Sbjct: 167 PRSEKPHDRDRDGSFPSEPGLRRSDSLLSFRLDLDLGPSLLSELLGVM--SLPEAPAAE- 223
Query: 120 DAEPRPGTQPPQARCRP 136
P P PP P
Sbjct: 224 --TPAPAANPPAPTANP 238
Score = 27.3 bits (59), Expect = 4.8
Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 25/82 (30%)
Query: 57 PPEPRAPPAGAPRSPP-PPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PP P A P G +PP A P + A +P+ P AA P
Sbjct: 231 PPAPTANPTGPAANPPATTANPPAPAANPSAP---------------------AATPTGP 269
Query: 116 AAKPDAEPRPGTQPPQARCRPN 137
AA P A T P C PN
Sbjct: 270 AANPPAPAASST--PHGHC-PN 288
>gi|13786127 Cdc42 effector protein 4 [Homo sapiens]
Length = 356
Score = 70.5 bits (171), Expect = 5e-13
Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 1 MPVLKQLGPA----QPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGP 56
MP+LKQL + + + R D A ISAPLGDFRHT+HVGR GDAFGDTSFL+ G P
Sbjct: 1 MPILKQLVSSSVHSKRRSRADLTAEMISAPLGDFRHTMHVGRAGDAFGDTSFLNSKAGEP 60
Query: 57 PPE 59
E
Sbjct: 61 DGE 63
Score = 45.1 bits (105), Expect = 2e-05
Identities = 42/133 (31%), Positives = 50/133 (37%), Gaps = 36/133 (27%)
Query: 37 GRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPP-------------PAVPQSA-AP 82
G GGD G PR A P SP P P VP++
Sbjct: 150 GEGGD---------EEAGTEEAVPRRNGAAGPHSPDPLLDEQAFGDLTDLPVVPKATYGL 200
Query: 83 SPADPLLSFHLDLGPSMLDAVLGVMDAAR--PE-----------AAAAKPDAEPRPGTQP 129
A+ ++SFH+DLGPSML VL +MD PE AA A P P
Sbjct: 201 KHAESIMSFHIDLGPSMLGDVLSIMDKEEWDPEEGEGGYHGDEGAAGTITQAPPYAVAAP 260
Query: 130 PQARCRPNADLEL 142
P AR A +L
Sbjct: 261 PLARQEGKAGPDL 273
>gi|5802998 Cdc42 effector protein 2 [Homo sapiens]
Length = 210
Score = 52.0 bits (123), Expect = 2e-07
Identities = 57/196 (29%), Positives = 74/196 (37%), Gaps = 88/196 (44%)
Query: 1 MPVLKQLGPAQPKKRPDRGALS---ISAPLGDFRHTLHVGRGG--DAFGDTSFLS----- 50
+P+ + G + KK R LS IS PLGDFRHT+H+G GG D FGD SFL
Sbjct: 5 VPIYLKRGSRKGKKEKLRDLLSSDMISPPLGDFRHTIHIGSGGGSDMFGDISFLQGKFHL 64
Query: 51 ------------------------------RHGGGPPP------------EPRA---PPA 65
GP P P+A P A
Sbjct: 65 LPGTMVEGPEEDGTFDLPFQFTRTATVCGRELPDGPSPLLKNAISLPVIGGPQALTLPTA 124
Query: 66 GAPRSP-------PPPA-----------VPQSAAPSPA--------DPLLS-------FH 92
AP P P P+ +P++ +P+ +P LS H
Sbjct: 125 QAPPKPPRLHLETPQPSPQEGGSVDIWRIPETGSPNSGLTPESGAEEPFLSNASSLLSLH 184
Query: 93 LDLGPSMLDAVLGVMD 108
+DLGPS+LD VL +MD
Sbjct: 185 VDLGPSILDDVLQIMD 200
>gi|19923356 Cdc42 effector protein 3 [Homo sapiens]
Length = 254
Score = 45.1 bits (105), Expect = 2e-05
Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 4 LKQLGPAQPKKRPDRGALS---ISAPLGDFRHTLHVGRGG--DAFGDTSFL 49
LK + KK R LS IS PLGDFRHT+H+G+ G D FGD SFL
Sbjct: 9 LKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFL 59
Score = 34.3 bits (77), Expect = 0.039
Identities = 16/21 (76%), Positives = 17/21 (80%)
Query: 88 LLSFHLDLGPSMLDAVLGVMD 108
LLS LDLGPS+LD VL VMD
Sbjct: 231 LLSLQLDLGPSLLDEVLNVMD 251
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 44.3 bits (103), Expect = 4e-05
Identities = 30/84 (35%), Positives = 32/84 (38%), Gaps = 22/84 (26%)
Query: 50 SRHGGGPPPE-PRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMD 108
+R GGG P E P A PA P PPPPA PQ P P P
Sbjct: 3 ARGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPP--------------------- 41
Query: 109 AARPEAAAAKPDAEPRPGTQPPQA 132
A P A P PR PP+A
Sbjct: 42 APPPGPGPAPPQHPPRAEALPPEA 65
Score = 43.9 bits (102), Expect = 5e-05
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 39 GGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSP 84
GG G++ + G PPP P APP P PPPPA P P+P
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
Score = 38.1 bits (87), Expect = 0.003
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PPP P PA A PPPPA P A SP P S + L + L G AR +
Sbjct: 761 PPPGPA--PAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPL---AGPALPARRLSR 815
Query: 116 AAKPDAEPRP----GTQPPQARCRP 136
A++P + +P G P A RP
Sbjct: 816 ASRPLSASQPSLPHGAPGPAASTRP 840
Score = 32.7 bits (73), Expect = 0.11
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 42 AFGDTSFLSRHGGGPPPEPRAPPAGAPRSPP-PPAVPQSAAPSPADPLLSFHLDLGPSM- 99
A G + R GP P +P P SPP PA P++ SP L + L GP++
Sbjct: 751 ALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPL-AGPALP 809
Query: 100 ---LDAVLGVMDAARPE--------AAAAKP--DAEPRPGTQPPQARCRPNAD 139
L + A++P AA+ +P + PR G P P+ D
Sbjct: 810 ARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPD 862
Score = 29.6 bits (65), Expect = 0.96
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPAD 86
PPP P PP P P P ++ P AD
Sbjct: 37 PPPPPAPPPGPGPAPPQHPPRAEALPPEAAD 67
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 44.3 bits (103), Expect = 4e-05
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 44 GDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAV 103
G S S G P P P+ P AP S PP P A P PA P P+ ++
Sbjct: 305 GAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACP-------SAPAPRRSI 357
Query: 104 LGVMDAARPEAAAAKPDAEPRPGTQPP 130
+ + P AA P EP P + P
Sbjct: 358 ISRLFGTSPATEAAPPPPEPVPAAEGP 384
Score = 26.9 bits (58), Expect = 6.2
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 22/106 (20%)
Query: 58 PEPRAPPAGAPR---------------SPPPPAVPQSAAPSPA--DPLLSFHLD--LGPS 98
P P P A APR + PPP P AA PA + F D L S
Sbjct: 343 PPPACPSAPAPRRSIISRLFGTSPATEAAPPPPEPVPAAEGPATVQSVEDFVPDDRLDRS 402
Query: 99 MLDAVLGVMDAARPEAAAAKPDAE---PRPGTQPPQARCRPNADLE 141
L+ D + A AA+ D++ G P A + + DLE
Sbjct: 403 FLEDTTPARDEKKVGAKAAQQDSDSDGEALGGNPMVAGFQDDVDLE 448
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 44.3 bits (103), Expect = 4e-05
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 23/87 (26%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPA-----------DPLLSFHLD---LGPSMLD 101
PPP P PP PPPP +P AAPS A +P++S L +GP++L+
Sbjct: 1442 PPPPPPPPPP----PPPPPVIPHPAAPSAAQANAILAPVKSNPVVSQTLSPGFVGPNILN 1497
Query: 102 AVL--GVMDAARPEAAAAKPDAEPRPG 126
VL +M +A+P AA P E PG
Sbjct: 1498 PVLPVAIMASAQP---AAIPSDETAPG 1521
Score = 27.3 bits (59), Expect = 4.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 10/60 (16%)
Query: 38 RGGDAFGDTSFLSRHGGGPPP---EPRAPPAGAPRSP-------PPPAVPQSAAPSPADP 87
R G + G +S +R PPP PA PRSP P+ P+ SP+ P
Sbjct: 24 RSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPP 83
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 43.5 bits (101), Expect = 6e-05
Identities = 33/90 (36%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 50 SRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAP--------SPADPLLSFHLDLG-PSML 100
+R G PPP P P AP PPPP+ P A P P P L G P
Sbjct: 304 ARGRGAPPPPPSRAPTAAP-PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPP 362
Query: 101 DAVLGVMDAARPEAAAAKPDAEPRPGTQPP 130
+VLGV P A P P PG PP
Sbjct: 363 PSVLGV----GPVAPPPPPPPPPPPGPPPP 388
Score = 35.4 bits (80), Expect = 0.018
Identities = 23/76 (30%), Positives = 27/76 (35%)
Query: 50 SRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDA 109
S G PPP P G PPPP P P P L S P+ ++D
Sbjct: 353 SAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAALLDQ 412
Query: 110 ARPEAAAAKPDAEPRP 125
R A K + RP
Sbjct: 413 IREGAQLKKVEQNSRP 428
Score = 33.5 bits (75), Expect = 0.067
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 54 GGPPPEPRAPPAGAPRSPPPPA-------VPQSAAPSPADP 87
GGPPP P P P PPPPA P S AP+ A P
Sbjct: 285 GGPPPPPPPPHNSGP--PPPPARGRGAPPPPPSRAPTAAPP 323
Score = 30.0 bits (66), Expect = 0.74
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSP 84
PPP P P G P PPPP P ++ P P
Sbjct: 277 PPPPP--PSRGGP--PPPPPPPHNSGPPP 301
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 43.5 bits (101), Expect = 6e-05
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 22/104 (21%)
Query: 37 GRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLG 96
G GDAFG + L++ G PP P AP G PR P S+ P +P
Sbjct: 267 GGSGDAFGAAAMLAK--GSWPPHPAAPSGGRPRGAASPPDLASSPRCPREP--------- 315
Query: 97 PSMLDAVLGV-----------MDAARPEAAAAKPDAEPRPGTQP 129
PS+ +AV V AA AAAA + P P + P
Sbjct: 316 PSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPP 359
Score = 29.3 bits (64), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 57 PPEPRAPPAGAPRSPPPPAVPQSAAPSPADPL 88
PP P PP +P S P + P + A SP+ PL
Sbjct: 481 PPSPEPPP--SPGSADPDSSPLAKAASPSPPL 510
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 42.7 bits (99), Expect = 1e-04
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 9 PAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAP 68
P +RP RG + + A G R GR GD R PPP PR P AP
Sbjct: 110 PQGRAQRPQRGGVDLPATPGGPRGQC-AGRSGDVLRRAG---RRRARPPPVPRLPAPRAP 165
Query: 69 RSPPPPAVPQSAAPS 83
R P PA P + P+
Sbjct: 166 RRPRGPATPDPSPPA 180
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 42.7 bits (99), Expect = 1e-04
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 56 PPPEPRAPPA--GAPRSPPPPAVPQSAAP------SPADPLLSFHLDLGPSMLDAVLGVM 107
PPP P APP P+ PPPP+ +S AP +P P + ++G S G+
Sbjct: 1109 PPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLA 1168
Query: 108 DAARPEAAAAKPDAEPRPGT-QPPQARCRPNA 138
+ A+P PR G PQ+ R +A
Sbjct: 1169 GPGPAGYSTARPTIPPRAGVISAPQSHARASA 1200
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 53 GGGPPPEPRAPP--AGAPRSPPPPAVP--QSAAPSPADPLL 89
G GPPP P APP GAP PPPP +P P P PLL
Sbjct: 559 GVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLL 599
Score = 34.7 bits (78), Expect = 0.030
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
GPP P P G P PP P +P A P P L ++G+ P
Sbjct: 550 GPPAAPPLPGVGPPPPPPAPPLPGGAPLPPP-----------PPPLPGMMGIPPPPPPPL 598
Query: 115 AAAKPDAEPRPGTQPP 130
P P G PP
Sbjct: 599 LFGGPPPPPPLGGVPP 614
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 53 GGGPPPEPRAPP--AGAPRSPPPPAVP--QSAAPSPADPLL 89
G GPPP P APP GAP PPPP +P P P PLL
Sbjct: 559 GVGPPPPPPAPPLPGGAPLPPPPPPLPGMMGIPPPPPPPLL 599
Score = 34.7 bits (78), Expect = 0.030
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
GPP P P G P PP P +P A P P L ++G+ P
Sbjct: 550 GPPAAPPLPGVGPPPPPPAPPLPGGAPLPPP-----------PPPLPGMMGIPPPPPPPL 598
Query: 115 AAAKPDAEPRPGTQPP 130
P P G PP
Sbjct: 599 LFGGPPPPPPLGGVPP 614
>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
sapiens]
Length = 252
Score = 42.4 bits (98), Expect = 1e-04
Identities = 32/86 (37%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 62 APPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDL------GPSMLDAV------LGVMDA 109
A AGA R+P PPA P S PADPLL P A G +
Sbjct: 131 AGAAGAARAPKPPA-PGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALGL 189
Query: 110 ARPEAAAAKPDAEPRPGTQPPQARCR 135
R E AA+P A PR ++PP CR
Sbjct: 190 GRREKLAARPAATPRRASRPPWQGCR 215
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.4 bits (98), Expect = 1e-04
Identities = 31/93 (33%), Positives = 34/93 (36%), Gaps = 21/93 (22%)
Query: 51 RHGGGPPPEPRAP---PAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVM 107
R G PP PRAP PA A + PPP P+P V
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAP------------------VAAAA 144
Query: 108 DAARPEAAAAKPDAEPRPGTQPPQARCRPNADL 140
A P AAAA A P PG P R + A L
Sbjct: 145 PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL 177
Score = 37.4 bits (85), Expect = 0.005
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 56 PPPEPRAPPAGA----PRSPPPPAVPQSAAPSPADP 87
PPP P APPA A PR PPPAV P P P
Sbjct: 180 PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPP 215
Score = 32.3 bits (72), Expect = 0.15
Identities = 40/153 (26%), Positives = 53/153 (34%), Gaps = 23/153 (15%)
Query: 8 GPAQPKKRPDRGA-LSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGG-GPPPEPRAPPA 65
GPAQP R R A L+ P + G + +R PPP+P APP
Sbjct: 163 GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQ 222
Query: 66 GAPRSPPPPAVPQ---------SAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAA 116
PP P P +A P ++ + G + G + E AA
Sbjct: 223 QQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAA 282
Query: 117 AKPDAE------------PRPGTQPPQARCRPN 137
A+ E RPG PP A RP+
Sbjct: 283 ARGRLERTRLGALALPRGDRPGRAPPAASARPS 315
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 42.0 bits (97), Expect = 2e-04
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADP 87
GPPP P P G P PPPP +P P P P
Sbjct: 335 GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPP 367
Score = 34.3 bits (77), Expect = 0.039
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPA 85
GPPP P PP P PPP P A P PA
Sbjct: 346 GPPPPP--PPPPLPNQVPPPPPPPPAPPLPA 374
Score = 30.0 bits (66), Expect = 0.74
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 56 PPPEPRAPPAGAPRS---PPPPAVP-----QSAAPSPADP 87
PPP P PP A S PPPP P S P P P
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPP 352
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 42.0 bits (97), Expect = 2e-04
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADP 87
GPPP P P G P PPPP +P P P P
Sbjct: 335 GPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPP 367
Score = 34.3 bits (77), Expect = 0.039
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPA 85
GPPP P PP P PPP P A P PA
Sbjct: 346 GPPPPP--PPPPLPNQVPPPPPPPPAPPLPA 374
Score = 30.0 bits (66), Expect = 0.74
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 56 PPPEPRAPPAGAPRS---PPPPAVP-----QSAAPSPADP 87
PPP P PP A S PPPP P S P P P
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPP 352
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 41.2 bits (95), Expect = 3e-04
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PPP P PP P PPPP +P +APS F + + +A++ A
Sbjct: 629 PPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMF------VKYSTITRLQNASQHSGA 682
Query: 116 AAKPDAEPRPGTQ--PPQARCRPN 137
KP P +Q PQ PN
Sbjct: 683 LFKPPTPPVMQSQSVKPQILVPPN 706
Score = 35.0 bits (79), Expect = 0.023
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 57 PPEPRAPPAGAPRSPPPPAVPQSAA----PSPADPLL-SFHLDLGPSMLDAVLGVMDAAR 111
PP PP P PPPP P SA P+P P L F P + V + A
Sbjct: 704 PPNGVVPP---PPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAP 760
Query: 112 PEAAAAKPDAEPRPGTQPPQ 131
P P P P PP+
Sbjct: 761 PTPPPPPPIPAPLPPQAPPK 780
Score = 34.3 bits (77), Expect = 0.039
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 16/81 (19%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PPP P + A +P P++PQ +AP P P + V + A P
Sbjct: 717 PPPTPGSAMAQLKPAPCAPSLPQFSAPPP------------PLKIHQVQHITQVAPP--- 761
Query: 116 AAKPDAEPRPGTQPPQARCRP 136
P P P PPQA +P
Sbjct: 762 -TPPPPPPIPAPLPPQAPPKP 781
Score = 33.1 bits (74), Expect = 0.087
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 7/34 (20%)
Query: 56 PPPE-----PRAPPAGAPRSPPPPAVPQSAAPSP 84
PPPE P PP+ P PPPP P +A+P+P
Sbjct: 919 PPPESSLVFPPPPPSPVPAPPPPP--PPTASPTP 950
Score = 29.6 bits (65), Expect = 0.96
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 57 PPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLS 90
P P PP + PPPP P A P P P S
Sbjct: 914 PDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTAS 947
Score = 28.1 bits (61), Expect = 2.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSP 84
PP P PP AP P P P P+P
Sbjct: 760 PPTPPPPPPIPAPLPPQAPPKPLVTIPAP 788
Score = 28.1 bits (61), Expect = 2.8
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 15/48 (31%)
Query: 56 PPPEPRAPPAGAPRSPP---------------PPAVPQSAAPSPADPL 88
PPP P P P++PP P V Q+A P+P P+
Sbjct: 763 PPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPV 810
Score = 26.9 bits (58), Expect = 6.2
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 16/92 (17%)
Query: 56 PPPEPRAPPAG------APRSPPPPAVPQSAAPSPADP-LLSFHLDLGPSMLDAVLGVM- 107
P P P PPA A PP P P P P P SF PS L V V+
Sbjct: 804 PTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVK 863
Query: 108 -------DAARPEAAAAKPDAEPRPGTQPPQA 132
P A ++P +P P PQ+
Sbjct: 864 QIASQFPPPPTPPAMESQP-LKPVPANVAPQS 894
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 41.2 bits (95), Expect = 3e-04
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 54 GGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPE 113
G P P P PP AP PPP +P A P P L L + A E
Sbjct: 10 GRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASAE 69
Query: 114 AAAAKPDA-----EPRPGTQPPQARCRP 136
A+ A P P PP +CRP
Sbjct: 70 ASRGGGGAGAFYPVPPPPLPPPPPQCRP 97
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 41.2 bits (95), Expect = 3e-04
Identities = 27/77 (35%), Positives = 30/77 (38%), Gaps = 14/77 (18%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PPP P P P+ PPPP PQ A PSP PL++ P P
Sbjct: 1457 PPPTPPPAPTPQPQPPPPPPPPQPALPSP-PPLVAPTPSSPPP-------------PPLP 1502
Query: 116 AAKPDAEPRPGTQPPQA 132
P A P P PP A
Sbjct: 1503 PPPPPAMPSPPPPPPPA 1519
Score = 38.1 bits (87), Expect = 0.003
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 9/43 (20%)
Query: 56 PPPEPRAPPAGAPRSPPPP---AVP------QSAAPSPADPLL 89
PPP P PP P PPPP A P + AAPSP DP L
Sbjct: 1498 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPEL 1540
Score = 33.5 bits (75), Expect = 0.067
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 19/91 (20%)
Query: 55 GPPPEPRAPPA---GAPRSP-----PPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGV 106
GPPP P P A G P P PPP P + P P P P A+
Sbjct: 1432 GPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP------PPPPPPQPAL--- 1482
Query: 107 MDAARPEAAAAKPDAEPRPGTQPPQARCRPN 137
+ P A P + P P PP P+
Sbjct: 1483 --PSPPPLVAPTPSSPPPPPLPPPPPPAMPS 1511
Score = 32.0 bits (71), Expect = 0.19
Identities = 37/136 (27%), Positives = 48/136 (35%), Gaps = 38/136 (27%)
Query: 11 QPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRS 70
+ KK P+RG P G +H G G G +FL +
Sbjct: 727 EKKKGPERGG---ETPEGLATSVVHYGAGAKELG--AFLQKS-----------------P 764
Query: 71 PPPPAVPQSAAPSPADPLLSF---HLDL-----GPSMLDAVLGVMDAARPEAA------- 115
PPPP QS P+P LL L L P +L +VL + P A+
Sbjct: 765 PPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLL 824
Query: 116 -AAKPDAEPRPGTQPP 130
A D P+P PP
Sbjct: 825 EPATRDGAPQPPPPPP 840
Score = 31.6 bits (70), Expect = 0.25
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 53 GGGPPPEPRAPPAGAPRSPPPPA------VPQSAAPSPADPLLSFHLDLGPSMLDAVLGV 106
G GPP PAGA RSP P VP ++ P L P+M + G
Sbjct: 898 GVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTMEEMFGGG 957
Query: 107 MDAARPEAAAAKPDAEPRPGTQPP 130
+A + + +P+ G PP
Sbjct: 958 AADDYGKAGPPEDEGDPKAGAGPP 981
Score = 31.6 bits (70), Expect = 0.25
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 16/98 (16%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVP--------QSAAPSPADPLLSFHLDLGPSMLDAV--- 103
GPP + P AGA P PPA +++ P P L + P + V
Sbjct: 966 GPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAE 1025
Query: 104 -LGVMDAARPEAAAAKPDAEPRPGTQPPQARCRPNADL 140
LG++ + P AA P P P PP P L
Sbjct: 1026 PLGLIQSG-PHQAAPPPPPPPPP---PPAPASEPKGGL 1059
Score = 30.8 bits (68), Expect = 0.43
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Query: 31 RHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAP-PAGAPRSP-------PPPAVPQSAAP 82
R + V R G A S GG P P+AP P P +P PP P++A P
Sbjct: 1669 RPPVPVRRSGQAKNPVSA----GGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMP 1724
Query: 83 SPADP 87
P P
Sbjct: 1725 EPPAP 1729
Score = 30.0 bits (66), Expect = 0.74
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 37 GRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAP 82
G GG D S + GGPP P PP PP A QS +P
Sbjct: 460 GFGGGQAQDLSKAPSYSGGPPQPPSGPP------PPGLATCQSYSP 499
Score = 30.0 bits (66), Expect = 0.74
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 25/77 (32%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSP--ADPLLSFHLDLGPSMLDAVLGVMDAARPE 113
P P PP P PPPPA+P P P A PL AA PE
Sbjct: 1491 PTPSSPPPPPLPP--PPPPAMPSPPPPPPPAAAPL--------------------AAPPE 1528
Query: 114 AAAAKPDAEPR-PGTQP 129
AA +P P T+P
Sbjct: 1529 EPAAPSPEDPELPDTRP 1545
Score = 29.6 bits (65), Expect = 0.96
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 52 HGGGPPPEPRAPPAGAPRSPPPPAVPQ----SAAPSPADPLLSFHL 93
H PPP P PP AP S P + S P SFHL
Sbjct: 1035 HQAAPPPPPPPPPPPAPASEPKGGLTSPIFCSTKPKKLLKTSSFHL 1080
Score = 27.3 bits (59), Expect = 4.8
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 12/66 (18%)
Query: 37 GRGGDAFGDTSFLSRHGGGPPPEP---RAPPAG---------APRSPPPPAVPQSAAPSP 84
GR A +T L PP P A P G AP PPPP P + A P
Sbjct: 996 GRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPASEP 1055
Query: 85 ADPLLS 90
L S
Sbjct: 1056 KGGLTS 1061
Score = 26.9 bits (58), Expect = 6.2
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 18/67 (26%)
Query: 66 GAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPRP 125
GAP+ PPPP P P P+ P L+A L + E AA P P
Sbjct: 831 GAPQPPPPP-------PPPPPPM--------PLQLEAHL---RSHGLEPAAPSPRLRPEE 872
Query: 126 GTQPPQA 132
PP A
Sbjct: 873 SLDPPGA 879
Score = 26.9 bits (58), Expect = 6.2
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 20/76 (26%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
GPP P A G P P P+ + P P PLL + P
Sbjct: 1421 GPPLAPAAAVPGPPPLPGLPSANSNGTPEP--PLL------------------EEKPPPT 1460
Query: 115 AAAKPDAEPRPGTQPP 130
P +P+P PP
Sbjct: 1461 PPPAPTPQPQPPPPPP 1476
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 40.8 bits (94), Expect = 4e-04
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSML 100
PPP P PP P PPPP P +AP +S L L PS++
Sbjct: 1993 PPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFPSIM 2037
Score = 34.7 bits (78), Expect = 0.030
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 57 PPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAA 116
P P +P P PPPP P PS P+ + P L A P
Sbjct: 1949 PISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTP--LQAPPPTPPPPPPPPPP 2006
Query: 117 AKPDAEPRPGTQPPQARCRPNADLEL 142
P P P + PPQ + + DL L
Sbjct: 2007 PPPPPPPPPPSAPPQVQLPVSLDLPL 2032
Score = 32.7 bits (73), Expect = 0.11
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
P P+P P +P+ P P+ + PSP L L + D P+A+
Sbjct: 2348 PSPKPE-PEKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSDP---------PQAS 2397
Query: 116 AAKPDAEPRPGTQPPQARCRPNA 138
A+P +P+P QP P+A
Sbjct: 2398 TAQPQPQPQPPKQPQLIGRPPSA 2420
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 40.8 bits (94), Expect = 4e-04
Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 19/126 (15%)
Query: 9 PAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAPP---A 65
P +P++ P +G P H G+ SR PP +P+ PP
Sbjct: 138 PGKPERPPPQGGNQSQGP------PPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEG 191
Query: 66 GAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPRP 125
P+ PPPP PQ P+ +P P A G P +P P
Sbjct: 192 NKPQGPPPPGKPQGPPPAGGNP-------QQPQAPPA--GKPQGPPPPPQGGRP-PRPAQ 241
Query: 126 GTQPPQ 131
G QPPQ
Sbjct: 242 GQQPPQ 247
Score = 33.9 bits (76), Expect = 0.051
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 51 RHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSP 84
R GG P+ PP G P+ PPP QS P P
Sbjct: 40 RPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPP 73
Score = 29.3 bits (64), Expect = 1.3
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 19/89 (21%)
Query: 9 PAQPKKRPDRGALSISAPLGDFRHTLHVGR-------GGDAFGDTSFLSRHGGGPPPEPR 61
P +P+ RP +G P H G+ GG+ T PPP+
Sbjct: 75 PGKPEGRPPQGGNQSQGP------PPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGG 128
Query: 62 ------APPAGAPRSPPPPAVPQSAAPSP 84
PP G P PPP QS P P
Sbjct: 129 NQSHRPPPPPGKPERPPPQGGNQSQGPPP 157
Score = 28.1 bits (61), Expect = 2.8
Identities = 21/84 (25%), Positives = 26/84 (30%), Gaps = 7/84 (8%)
Query: 55 GPPPEPRAPPAGAPRS-------PPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVM 107
GPPP P P P+ PP P P+ P + G G
Sbjct: 70 GPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGN 129
Query: 108 DAARPEAAAAKPDAEPRPGTQPPQ 131
+ RP KP+ P G Q
Sbjct: 130 QSHRPPPPPGKPERPPPQGGNQSQ 153
Score = 27.3 bits (59), Expect = 4.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Query: 55 GPPPEPR------APPAGAPRSPPPPAVPQSAAPSP 84
GPPP+ PP G P PP QS P P
Sbjct: 59 GPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPP 94
Score = 26.9 bits (58), Expect = 6.2
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 58 PEPRAPPAG--APRSPPPPAVPQSAAP 82
PE R P G R PPPP PQ P
Sbjct: 36 PEGRRPQGGNQPQRPPPPPGKPQGPPP 62
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 40.4 bits (93), Expect = 5e-04
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
P PE A PA A +P PA P +A P+P +P +F P+ ++ + PE +
Sbjct: 1112 PTPEEPASPAAAVPTPEEPASPAAAVPTPEEP--AFPAPAVPTPEESASAAVAVPTPEES 1169
Query: 116 AAKPDAEPRP 125
A+ A P P
Sbjct: 1170 ASPAAAVPTP 1179
Score = 36.6 bits (83), Expect = 0.008
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
PPPE PA A +P P P +A P+P +P S AV + P AA
Sbjct: 1034 PPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP---------TSPAAAVPTPEEPTSPAAA 1084
Query: 116 AAKPDAEPRPGTQPP 130
P+ P P
Sbjct: 1085 VPTPEEPTSPAAAVP 1099
Score = 35.0 bits (79), Expect = 0.023
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
P PE PA A +P P P +A P+P +P S AV + A P AA
Sbjct: 1073 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP---------TSPAAAVPTPEEPASPAAA 1123
Query: 116 AAKPDAEPRPGTQPP 130
P+ P P
Sbjct: 1124 VPTPEEPASPAAAVP 1138
Score = 32.7 bits (73), Expect = 0.11
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 9/73 (12%)
Query: 58 PEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAA 117
PE A PA A +P P P +A P+P +P S AV + P AA
Sbjct: 997 PEEPASPAAAVPTPEEPTSPAAAVPTPEEP---------TSPAAAVPPPEEPTSPAAAVP 1047
Query: 118 KPDAEPRPGTQPP 130
P+ P P
Sbjct: 1048 TPEEPTSPAAAVP 1060
Score = 32.7 bits (73), Expect = 0.11
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAA 115
P PE PA A +P P P +A P P +P S AV + P AA
Sbjct: 1008 PTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEP---------TSPAAAVPTPEEPTSPAAA 1058
Query: 116 AAKPDAEPRPGTQPP 130
P+ P P
Sbjct: 1059 VPTPEEPTSPAAAVP 1073
Score = 28.9 bits (63), Expect = 1.6
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSP---ADPLLSFHLDLGPSMLDAVLGVMDAARP 112
P PE A PA A + PA P +A P+P A P S P++ A + M+ P
Sbjct: 1275 PTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPPMEEVSP 1334
Score = 27.7 bits (60), Expect = 3.7
Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 55 GPPPEPRAPPAG--APRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARP 112
G P P P AP P AV S PA P + P+ A + +
Sbjct: 969 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 1028
Query: 113 EAAAAKPDAEP 123
AAA P EP
Sbjct: 1029 PAAAVPPPEEP 1039
Score = 26.9 bits (58), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPAD 86
P PE A A A +P A P +A P+PA+
Sbjct: 1151 PTPEESASAAVAVPTPEESASPAAAVPTPAE 1181
Score = 26.6 bits (57), Expect = 8.2
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 57 PPEPRAPPAGAP--RSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
P EP +P A P P PA +A P+P +P S AV + P A
Sbjct: 1023 PEEPTSPAAAVPPPEEPTSPA---AAVPTPEEP---------TSPAAAVPTPEEPTSPAA 1070
Query: 115 AAAKPDAEPRPGTQPP 130
A P+ P P
Sbjct: 1071 AVPTPEEPTSPAAAVP 1086
Score = 26.6 bits (57), Expect = 8.2
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 57 PPEPRAPPAGAP--RSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
P EP +P A P P PA +A P+P +P S AV + P A
Sbjct: 1049 PEEPTSPAAAVPTPEEPTSPA---AAVPTPEEP---------TSPAAAVPTPEEPTSPAA 1096
Query: 115 AAAKPDAEPRPGTQPP 130
A P+ P P
Sbjct: 1097 AVPTPEEPTSPAAAVP 1112
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 40.4 bits (93), Expect = 5e-04
Identities = 31/105 (29%), Positives = 36/105 (34%), Gaps = 26/105 (24%)
Query: 40 GDAFGDTSFLSRHGGGPPPEPRAPPAG--------------APRSPPPPAVPQSAAPSPA 85
G++ G T + G PPP P PP+ P PPPP P P P
Sbjct: 511 GNSVGPTMGAASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPP 570
Query: 86 DPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPRPGTQPP 130
P L GP+ P A P A P PGT P
Sbjct: 571 PPPLP-----GPA-------AETVPAPPLAPPLPSAPPLPGTSSP 603
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/126 (30%), Positives = 44/126 (34%), Gaps = 17/126 (13%)
Query: 8 GPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPR--APPA 65
GP P +IS PL + G+TS PP P APP
Sbjct: 125 GPGSRAPSPRLPNKTISGPL--------IPPASPRLGNTSEAHGAARTAPPRPNVPAPPP 176
Query: 66 GAPRSPPPPAVPQSAAPSP-ADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPR 124
P PPPP P + SP PL+S L L V A P A P P
Sbjct: 177 PTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVV------APPVPCAPPPPPPPP 230
Query: 125 PGTQPP 130
P T PP
Sbjct: 231 PPTPPP 236
Score = 38.1 bits (87), Expect = 0.003
Identities = 30/91 (32%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGV------MDA 109
PPP P PP P PP + A PL HL P L + +
Sbjct: 223 PPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPL---HLPPIPPPLPLLPPCGYPGLKAEP 279
Query: 110 ARPEAAAAKPDAEPRPGTQPPQARCRPNADL 140
A P A +P A P P PP A C P A L
Sbjct: 280 ASPAQDAQEPPAPPPP--LPPYASCSPRASL 308
Score = 33.5 bits (75), Expect = 0.067
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPSP---ADP 87
PP P PP GAP PPP A P S S ADP
Sbjct: 9 PPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADP 43
Score = 31.6 bits (70), Expect = 0.25
Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 22/96 (22%)
Query: 56 PPPEPRAPPAG----------------APRSPPPP------AVPQSAAPSPADPLLSFHL 93
PPP P PP G P +PPPP P+++ P+P P ++
Sbjct: 261 PPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSS 320
Query: 94 DLGPSMLDAVLGVMDAARPEAAAAKPDAEPRPGTQP 129
+ P + + A A P PG+QP
Sbjct: 321 ETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQP 356
Score = 27.7 bits (60), Expect = 3.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 60 PRAPPAGAPRSPPPPAVPQSAAPSPADPLLS 90
P PP P PPPP + P P+ P +S
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPPPSAPPVS 32
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 53 GGGPPPEPRAPPAGAPRSPPPPAV---PQSAAPSPADPLLSFHLDLGPSMLDAVLGVM-D 108
G GPPP P PP PR+P PA P SA SP L S G S + +
Sbjct: 775 GRGPPPAPPPPPP-PPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPE 833
Query: 109 AARPEAAAAKPDAEPRPGTQP 129
A P AA+ + PRP P
Sbjct: 834 GAFPGGGAAEEEGVPRPRAPP 854
Score = 31.6 bits (70), Expect = 0.25
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 63 PPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAE 122
P G P P + ++ S AD ++ P LD ++G AA P+ P
Sbjct: 725 PALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMG---AAAPQYPGRGPPPA 781
Query: 123 PRPGTQPPQARCRPNA 138
P P PP+A P A
Sbjct: 782 PPPPPPPPRAPADPAA 797
Score = 30.8 bits (68), Expect = 0.43
Identities = 36/137 (26%), Positives = 50/137 (36%), Gaps = 23/137 (16%)
Query: 7 LGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPP-------- 58
L P ++ P+ G AP L +G GG A T + GGGP
Sbjct: 1113 LEPGTERRAPETGG----APRAPGAGRLDLGSGGRAPVGTG--TAPGGGPGSGVDAKAGW 1166
Query: 59 ----EPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEA 114
P+ PP P PPP A P+ P+P + P D+ G A +
Sbjct: 1167 VDNTRPQPPPPPLP--PPPEAQPRRLEPAPPRARPEVAPEGEPGAPDSRAGGDTALSGDG 1224
Query: 115 AAAKPDAEPRPGTQPPQ 131
KP+ R G + P+
Sbjct: 1225 DPPKPE---RKGPEMPR 1238
Score = 28.9 bits (63), Expect = 1.6
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 18/64 (28%)
Query: 45 DTSFLSRHGGGPPPEPRAPPAGAP-----------------RSPPPPAVPQSAAP-SPAD 86
D S L G P APPA AP R PPP P P +PAD
Sbjct: 735 DDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPAD 794
Query: 87 PLLS 90
P S
Sbjct: 795 PAAS 798
Score = 28.5 bits (62), Expect = 2.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Query: 58 PEPRAPP----AGAPRSPPPP 74
P PRAPP GAPR PP P
Sbjct: 848 PRPRAPPEPPDPGAPRPPPDP 868
Score = 27.7 bits (60), Expect = 3.7
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 17/106 (16%)
Query: 46 TSFLSRHGGGPPPEPRAPPAGAPRSPPPPA--VPQSAAPSPADPLLSFHLDLGPSMLDAV 103
T LS PPP P P G P PPA P+ S PLL P D V
Sbjct: 438 TYLLSERPPRPPPPPPPPRDGPFPWPWPPAHSAPRPGTLSSPFPLLDGFPGADP---DDV 494
Query: 104 LGVMDAAR----------PEAAAAKPDAEP--RPGTQPPQARCRPN 137
L V +++R A + P +P + PP P+
Sbjct: 495 LTVTESSRGLNLECLWEKARRGAGRGGGAPAWQPASAPPAPHANPS 540
Score = 27.7 bits (60), Expect = 3.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 55 GPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLS 90
G PPEP P P P PA APS L+S
Sbjct: 575 GSPPEPLFPNDWDPLDPGVPAPQAPQAPSEVPQLVS 610
Score = 27.3 bits (59), Expect = 4.8
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 53 GGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADP 87
GGG E P AP PP P P+ P DP
Sbjct: 838 GGGAAEEEGVPRPRAPPEPPDPGAPR----PPPDP 868
Score = 26.9 bits (58), Expect = 6.2
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 6/31 (19%)
Query: 57 PPE----PRAPPAGAPRSPPPPAVPQSAAPS 83
PPE P PPA P +PP PA P PS
Sbjct: 1405 PPEGDTDPSTPPA--PPTPPHPATPGDGFPS 1433
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 39.7 bits (91), Expect = 0.001
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 22 SISAPLGDFRHTLH--VGRGGDAFGDTSFLSRHGGG---PPPEPR--APPAGAPRSPPPP 74
S +A D +L+ G GG +GD G G PP P+ A A P PPPP
Sbjct: 439 SAAALQSDLEDSLYKAAGGGGPLYGD-------GYGFRLPPSSPQKLADVAAPPGGPPPP 491
Query: 75 AVPQSAAPSPADPL-LSFHLDLGPSML--DAVLGVMDAARPEAAAAKPDAEPRPG 126
P S PS P+ SF D G S + ++ G +A + A P +E PG
Sbjct: 492 HSPYSGPPSRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAGAPPSELFPG 546
>gi|124107614 PR domain containing 13 [Homo sapiens]
Length = 707
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 32 HTLHVGRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSF 91
H + G GG AF +R G P + G SP PPA P AAPS A L
Sbjct: 159 HCVFSGGGGGAFLHHEHAARQGAVPAAD------GLGLSPKPPA-PDFAAPSQAGTLRPH 211
Query: 92 HLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPRPGT--QPPQARCRPNADLELN 143
LGP + A G + + EA++A P PG QP + + + + L+++
Sbjct: 212 --PLGPPPVQA-CGAREGIKREASSAPSATSPTPGKWGQPKKGKEQLDRALDMS 262
Score = 34.3 bits (77), Expect = 0.039
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 9 PAQPKKRPDRGA-LSISAPLGDFRHTLHVGRG-GDAFGDTSFLSRHGGGPPPEPRAPPAG 66
P + + +GA L++ LG R G G A G H P+ AG
Sbjct: 311 PYREESSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHHHHHAHHHHHPKCLLAG 370
Query: 67 APRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAE---- 122
P PPPP +P S A PLLS + P A V A P AAAA P A
Sbjct: 371 DPPPPPPPGLPCSGA-LRGFPLLS----VPPEEASAFKHVERA--PPAAAALPGARYAQL 423
Query: 123 -PRPGTQPPQARC 134
P PG P RC
Sbjct: 424 PPAPGL--PLERC 434
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/53 (41%), Positives = 23/53 (43%)
Query: 37 GRGGDAFGDTSFLSRHGGGPPPEPRAPPAGAPRSPPPPAVPQSAAPSPADPLL 89
GRGG R G PPP P A P PPPP P S+ PA P L
Sbjct: 363 GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPL 415
Score = 36.6 bits (83), Expect = 0.008
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 56 PPPEPRAPP---AGAPRSPPPPAVPQSAAPSPADP 87
PPP PR PP G P PPPPA +S P P
Sbjct: 352 PPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPP 386
Score = 32.7 bits (73), Expect = 0.11
Identities = 30/98 (30%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 38 RGGDAFGDTSFLSRHGG--GP-PPEPR--APPAGAPRSPPPPAVPQSAAPSPADPLLSFH 92
RGG+ + + G GP PP P APP PR PPPP + P P P
Sbjct: 321 RGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPG--RGGPPPPPPPATGRS 378
Query: 93 LDLGPSMLDAVLGVMDAARPEAAAAKPDAEPRPGTQPP 130
L P P A P P P PP
Sbjct: 379 GPLPP--------------PPPGAGGPPMPPPPPPPPP 402
Score = 31.6 bits (70), Expect = 0.25
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 56 PPPEPRAPPAGAPRSPPPPAVPQSAAPS 83
PPP P PP + P PP +P + P+
Sbjct: 395 PPPPPPPPPPSSGNGPAPPPLPPALVPA 422
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,520,114
Number of Sequences: 37866
Number of extensions: 675249
Number of successful extensions: 18092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 1005
Number of HSP's that attempted gapping in prelim test: 6737
Number of HSP's gapped (non-prelim): 7921
length of query: 148
length of database: 18,247,518
effective HSP length: 93
effective length of query: 55
effective length of database: 14,725,980
effective search space: 809928900
effective search space used: 809928900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.