CDC42EP1 15849

Name: CDC42EP1	Sequence: fasta or formatted (391aa)		NCBI GI: 23238226
Description: CDC42 effector protein 1		Referenced in: Additional Cell Cycle Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 48 2 C cysteine 0.5 2 1 D aspartate 5.1 20 2 E glutamate 4.1 16 2 F phenylalanine 2.6 10 1 G glycine 10.5 41 3 H histidine 3.1 12 2 I isoleucine 1.5 6 2 K lysine 2.3 9 2 L leucine 7.4 29 2 M methionine 1.8 7 1 N asparagine 2.8 11 1 P proline 13.8 54 2 Q glutamine 2.3 9 1 R arginine 6.4 25 2 S serine 11.5 45 3 T threonine 5.1 20 2 V valine 4.9 19 2 W tryptophan 1.3 5 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CDC42 effector protein 1 CDC42EP4 0.103 Cdc42 effector protein 4 CDC42EP2 0.069 Cdc42 effector protein 2 CDC42EP5 0.065 CDC42 effector protein 5 SF3A2 0.056 splicing factor 3a, subunit 2 CDC42EP3 0.051 Cdc42 effector protein 3 SFPQ 0.046 splicing factor proline/glutamine rich (polypyrimidin... TAF4 0.045 TBP-associated factor 4 NACA 0.042 nascent polypeptide-associated complex alpha subuni... CASKIN2 0.041 cask-interacting protein 2 isoform b CASKIN2 0.041 cask-interacting protein 2 isoform a PRR12 0.040 proline rich 12 POLR2A 0.040 DNA-directed RNA polymerase II A MUC7 0.038 mucin 7, secreted precursor MUC7 0.038 mucin 7, secreted precursor MUC7 0.038 mucin 7, secreted precursor MAPK1IP1L 0.037 MAPK-interacting and spindle-stabilizing protein [Ho... RIN3 0.037 Ras and Rab interactor 3 OGFR 0.036 opioid growth factor receptor SAMD1 0.035 sterile alpha motif domain containing 1 CASKIN1 0.033 CASK interacting protein 1 HOXA3 0.033 homeobox A3 isoform a HOXA3 0.033 homeobox A3 isoform a LOC100134663 0.033 PREDICTED: hypothetical protein, partial LMTK3 0.033 lemur tyrosine kinase 3 MUC2 0.033 mucin 2 precursor TBC1D10B 0.033 TBC1 domain family, member 10B UNCX 0.032 UNC homeobox CNOT3 0.032 CCR4-NOT transcription complex, subunit 3 MAPK7 0.032 mitogen-activated protein kinase 7 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.