Guide to the Human Genome
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Name: ADD1 Sequence: fasta or formatted (631aa) NCBI GI: 29826323
Description:

adducin 1 (alpha) isoform c

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [737aa] adducin 1 (alpha) isoform a
alt prot [768aa] adducin 1 (alpha) isoform b
alt prot [662aa] adducin 1 (alpha) isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         43           2
 C cysteine            1.3          8           1
 D aspartate           4.4         28           1
 E glutamate           8.4         53           3
 F phenylalanine       2.5         16           1
 G glycine             7.1         45           2
 H histidine           2.2         14           1
 I isoleucine          3.8         24           2
 K lysine              6.2         39           2
 L leucine             8.9         56           2
 M methionine          2.4         15           2
 N asparagine          4.8         30           2
 P proline             7.1         45           3
 Q glutamine           4.8         30           2
 R arginine            5.4         34           2
 S serine              7.6         48           2
 T threonine           5.1         32           2
 V valine              7.1         45           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.5         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adducin 1 (alpha) isoform c 
ADD1                  0.987   adducin 1 (alpha) isoform d 
ADD1                  0.981   adducin 1 (alpha) isoform a 
ADD1                  0.968   adducin 1 (alpha) isoform b 
ADD3                  0.513   adducin 3 (gamma) isoform a 
ADD3                  0.510   adducin 3 (gamma) isoform b 
ADD3                  0.510   adducin 3 (gamma) isoform b 
ADD2                  0.453   adducin 2 isoform a 
ADD2                  0.453   adducin 2 isoform e 
ADD2                  0.425   adducin 2 isoform b 
ADD2                  0.147   adducin 2 isoform d 
ADD2                  0.147   adducin 2 isoform c 
ARID1A                0.014   AT rich interactive domain 1A isoform b 
ARID1A                0.012   AT rich interactive domain 1A isoform a 
NEFH                  0.011   neurofilament, heavy polypeptide 200kDa 
RCSD1                 0.009   RCSD domain containing 1 
LOC653061             0.008   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.008   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.008   PREDICTED: similar to Golgin subfamily A member 8-l...
AKAP8L                0.008   A kinase (PRKA) anchor protein 8-like 
C4orf14               0.008   hypothetical protein LOC84273 
TNNT1                 0.007   troponin T1, skeletal, slow isoform c 
LOC653061             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.006   PREDICTED: zinc finger homeobox 2 
KIAA1598              0.006   shootin1 isoform a 
KIAA1598              0.006   shootin1 isoform b 
IQGAP2                0.006   IQ motif containing GTPase activating protein 2 [Ho...
C13orf34              0.006   aurora borealis 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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