Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 29725635
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29725635 otopetrin 1 [Homo sapiens]
(612 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29725635 otopetrin 1 [Homo sapiens] 1234 0.0
gi|30039714 otopetrin 2 [Homo sapiens] 328 9e-90
gi|30102940 otopetrin 3 [Homo sapiens] 284 2e-76
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|89057646 PREDICTED: hypothetical protein [Homo sapiens] 37 0.069
gi|89056946 PREDICTED: hypothetical protein [Homo sapiens] 37 0.069
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 35 0.15
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 35 0.20
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 35 0.20
gi|55741677 SET domain containing 1A [Homo sapiens] 35 0.26
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 35 0.26
gi|7662002 ER degradation enhancer, mannosidase alpha-like 1 [Ho... 34 0.34
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 34 0.45
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 34 0.45
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 34 0.45
gi|41352718 deltex homolog 1 [Homo sapiens] 34 0.45
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 33 0.59
gi|118200352 hypothetical protein LOC642273 [Homo sapiens] 33 0.59
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 33 0.77
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.77
gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens] 33 1.0
gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens] 33 1.0
gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens] 33 1.0
gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens] 33 1.0
gi|4557265 beta-1-adrenergic receptor [Homo sapiens] 33 1.0
gi|24431933 reticulon 4 isoform B [Homo sapiens] 33 1.0
gi|117938759 GNAS complex locus XLas [Homo sapiens] 33 1.0
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 33 1.0
gi|109689699 transmembrane protein 80 isoform 2 [Homo sapiens] 33 1.0
>gi|29725635 otopetrin 1 [Homo sapiens]
Length = 612
Score = 1234 bits (3194), Expect = 0.0
Identities = 612/612 (100%), Positives = 612/612 (100%)
Query: 1 MLEGLGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEM 60
MLEGLGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEM
Sbjct: 1 MLEGLGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEM 60
Query: 61 LSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQLLWMLWYVGRSSAHRRL 120
LSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQLLWMLWYVGRSSAHRRL
Sbjct: 61 LSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQLLWMLWYVGRSSAHRRL 120
Query: 121 FRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFSECLSATEGVFPVTHSVHTLLQ 180
FRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFSECLSATEGVFPVTHSVHTLLQ
Sbjct: 121 FRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFSECLSATEGVFPVTHSVHTLLQ 180
Query: 181 VYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVLNESKHQLNEHKERLITLGFGN 240
VYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVLNESKHQLNEHKERLITLGFGN
Sbjct: 181 VYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVLNESKHQLNEHKERLITLGFGN 240
Query: 241 ITTVLDDHTPQCNCTPPTLCTAISHGIYYLYPFNIEYQILASTMLYVLWKNIGRKVDSHQ 300
ITTVLDDHTPQCNCTPPTLCTAISHGIYYLYPFNIEYQILASTMLYVLWKNIGRKVDSHQ
Sbjct: 241 ITTVLDDHTPQCNCTPPTLCTAISHGIYYLYPFNIEYQILASTMLYVLWKNIGRKVDSHQ 300
Query: 301 HQKMQFKSDGVMVGAVLGLTVLAATIAVVVVYLIHIGRSKTKSESALIMFYLYAITLLML 360
HQKMQFKSDGVMVGAVLGLTVLAATIAVVVVYLIHIGRSKTKSESALIMFYLYAITLLML
Sbjct: 301 HQKMQFKSDGVMVGAVLGLTVLAATIAVVVVYLIHIGRSKTKSESALIMFYLYAITLLML 360
Query: 361 MGAAGLAGIRIYRIDEKSLDESKNPARKLDSDLLVGTASGSWLISWGSILAILCAEGHPR 420
MGAAGLAGIRIYRIDEKSLDESKNPARKLDSDLLVGTASGSWLISWGSILAILCAEGHPR
Sbjct: 361 MGAAGLAGIRIYRIDEKSLDESKNPARKLDSDLLVGTASGSWLISWGSILAILCAEGHPR 420
Query: 421 YTWYNLPYSILAIVEKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPK 480
YTWYNLPYSILAIVEKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPK
Sbjct: 421 YTWYNLPYSILAIVEKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPK 480
Query: 481 SGGVARDVAPQGKDMPPAANGNVCMRESHDKEEEKQEESSWGGSPSPVRLPRFLQGNAKR 540
SGGVARDVAPQGKDMPPAANGNVCMRESHDKEEEKQEESSWGGSPSPVRLPRFLQGNAKR
Sbjct: 481 SGGVARDVAPQGKDMPPAANGNVCMRESHDKEEEKQEESSWGGSPSPVRLPRFLQGNAKR 540
Query: 541 KVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYRMH 600
KVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYRMH
Sbjct: 541 KVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYRMH 600
Query: 601 AAASLFEVYCKI 612
AAASLFEVYCKI
Sbjct: 601 AAASLFEVYCKI 612
>gi|30039714 otopetrin 2 [Homo sapiens]
Length = 562
Score = 328 bits (841), Expect = 9e-90
Identities = 196/585 (33%), Positives = 297/585 (50%), Gaps = 51/585 (8%)
Query: 40 ESPAPRRGGVRASVPQKLAEMLSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTAL 99
ESP R G R V +K +LS + V + L+ A + V +D+ LTA+
Sbjct: 11 ESPPAPRAGPR-EVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDTDVFALLTAM 69
Query: 100 MLLQLLWMLWYVGRSSAHRRLFRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFS 159
MLL LW+L+Y+ R+ +D HAG WLRG + LF + T+I+ K GY+ F
Sbjct: 70 MLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVFKTGYYSSFF 129
Query: 160 ECLSATEGVFPVTHSVHTLLQVYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVL 219
EC SA + + P+ +V ++Q YFLW AKD + L G++ ++ TNL +W V+
Sbjct: 130 ECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTNLAIWMAAVV 189
Query: 220 NESKHQLNEHKERLITLGFGNITTVLDDHT------PQCNCTPPTLCTAISHGIYYLYPF 273
+ES HQ + + + + D H C C+ +C G +YLYPF
Sbjct: 190 DESVHQSHSYSSSHSNASHARL--ISDQHADNPVGGDSCLCS-TAVCQIFQQGYFYLYPF 246
Query: 274 NIEYQILASTMLYVLWKNIGRKV-----DSHQHQKMQFKSDGVMVGAVLGLTVLAATIAV 328
NIEY + ASTMLYV+WKN+GR + SH + + G VLGL + +AV
Sbjct: 247 NIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLFVVGLAV 306
Query: 329 VVVYLIHIGRSKTKSESALIMFYLYAITLLMLMGAAGLAGIRIYRIDEKSLDESKNPARK 388
++Y + + +++ AL+++Y + I L L L+G IYR D +++D KNP R
Sbjct: 307 FIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHHKNPTRT 366
Query: 389 LDSDLLVGTASGSWLISWGSILAILCAEGHPRYTWYNLPYSILAIVEKYIQNLFIFESIH 448
LD LL+G A G + IS+ SI+A++ NL +++L I + QN+FI ES+H
Sbjct: 367 LDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMFIIESLH 426
Query: 449 REP----EKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKDMPPAANGNVC 504
R P + + + +T N + + S+CP + G+ V+P D A
Sbjct: 427 RGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGL---VSPSPSDQREAV----- 478
Query: 505 MRESHDKEEEKQEESSWGGSPSPVRLPRFLQGNAKRKVLRNIAAFLFLCNISLWIPPAFG 564
+ V PR +R+ L++I+ FL LCN+ LWI PAFG
Sbjct: 479 ---------------------AIVSTPR---SQWRRQCLKDISLFLLLCNVILWIMPAFG 514
Query: 565 CRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYRMHAAASLFEVY 609
RP + N +E +G+ W ++VN+ +PF IFYRMHA +SL EVY
Sbjct: 515 ARPHFSNTVEVDFYGYSLWAVIVNICLPFGIFYRMHAVSSLLEVY 559
>gi|30102940 otopetrin 3 [Homo sapiens]
Length = 596
Score = 284 bits (726), Expect = 2e-76
Identities = 181/559 (32%), Positives = 265/559 (47%), Gaps = 53/559 (9%)
Query: 55 QKLAEMLSSQYGLIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQLLWMLWYVGRS 114
QK ++ S L V G + + + V+ D+ L L +L LLW+L+YV +
Sbjct: 84 QKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGDVWILLATLKVLSLLWLLYYVAST 143
Query: 115 SAHRRLFRLKDTHAGAGWLRGSITLFAVITVILGCLKIGYFIGFSECLSATEGVFPVTHS 174
+ +D HAG W+RGS+ LF T L ++GY + C S + VF V
Sbjct: 144 TRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFRVGYDVSHIRCKSQLDLVFSVIEM 203
Query: 175 VHTLLQVYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWANGVLNESKH-QLNEHKERL 233
V +Q + LW H KD ++ R G++ ++ TNLLLW V N+S H ++ L
Sbjct: 204 VFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNLLLWVLAVTNDSMHREIEAELGIL 263
Query: 234 ITLGFGNITTVLDDHTPQCNCTPPTLCTAISHGIYYLYPFNIEYQILASTMLYVLWKNIG 293
+ GN T C C T C A G LYPF+ EY ++ +L+V+WKN+G
Sbjct: 264 MEKSTGN-------ETNTCLCLNATACEAFRRGFLMLYPFSTEYCLICCAVLFVMWKNVG 316
Query: 294 RKVDSH---QHQKMQFKSDGVMVGAVLGLTVLAATIAVVVVYLIHIGRSKTKSESALIMF 350
R V H F G + G +LGL VL A + V V++ I + ++
Sbjct: 317 RHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQIEASGPAIACQ-YFTLY 375
Query: 351 YLYAITLLMLMGAAGLAGIRIYRIDEKSLDESKNPARKLDSDLLVGTASGSWLISWGSIL 410
Y + + +L M A LAG I+ ++E+ LD KNP R LD LL+G A G I++ SI+
Sbjct: 376 YAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLMGAALGQMGIAYFSIV 435
Query: 411 AILCAEGHPRYTWYNLPYSILAIVEKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGN 470
AI+ H L YS+L I++ QNLFI E +HR P L E TV G
Sbjct: 436 AIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRP--LWE--------TVPEGL 485
Query: 471 TMPLASSCPKSGGVARDVAPQGKDMPPAANGNVCMRESHDKEEEKQEESSWGGSPSPVRL 530
+ P+ G + G+ + A S +
Sbjct: 486 AGKQEAEPPRRGSLLE----LGQGLQRA---------------------------SLAYI 514
Query: 531 PRFLQGNAKRKVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLA 590
+ N KR+ L+ I+ FL LCNI+LW+ PAFG PE++NGLE+ +G++ W +VN
Sbjct: 515 HSYSHLNWKRRALKEISLFLILCNITLWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFG 574
Query: 591 MPFSIFYRMHAAASLFEVY 609
+P +FYRMH+ L EVY
Sbjct: 575 LPLGVFYRMHSVGGLVEVY 593
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 40.4 bits (93), Expect = 0.005
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 5 LGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPR 45
L +P SP AAA+A+ A +S P+A S S S+ P SPAPR
Sbjct: 180 LFTPLSPAAAAAAAAAAASAPSAGSSSSCSSASLPASPAPR 220
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 40.4 bits (93), Expect = 0.005
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 5 LGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPR 45
L +P SP AAA+A+ A +S P+A S S S+ P SPAPR
Sbjct: 180 LFTPLSPAAAAAAAAAAASAPSAGSSSSCSSASLPASPAPR 220
>gi|89057646 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 36.6 bits (83), Expect = 0.069
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 14 AASASVAGSSGPAACSPPSSSAPRSPES-PAPRRGGVRASVPQKLAEMLSSQYGLIVFVA 72
AA+ +V S G SPP AP +P + PAP G R + LA L VA
Sbjct: 2 AAAPAVCASQG----SPPG--APSAPAAAPAPAAGLGRCRMALLLAVALD--------VA 47
Query: 73 GLLLLLAWA---VHAAGVSKSDLLCFLTALML-LQLL-WMLWYVGRSSAHRR 119
G+ LL + G DLL + AL++ L LL W+LWY G R+
Sbjct: 48 GMAALLTGVFAQLQVRGRDFGDLLIYSGALLVFLSLLGWILWYTGNIEISRQ 99
>gi|89056946 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 36.6 bits (83), Expect = 0.069
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 14 AASASVAGSSGPAACSPPSSSAPRSPES-PAPRRGGVRASVPQKLAEMLSSQYGLIVFVA 72
AA+ +V S G SPP AP +P + PAP G R + LA L VA
Sbjct: 2 AAAPAVCASQG----SPPG--APSAPAAAPAPAAGLGRCRMALLLAVALD--------VA 47
Query: 73 GLLLLLAWA---VHAAGVSKSDLLCFLTALML-LQLL-WMLWYVGRSSAHRR 119
G+ LL + G DLL + AL++ L LL W+LWY G R+
Sbjct: 48 GMAALLTGVFAQLQVRGRDFGDLLIYSGALLVFLSLLGWILWYTGNIEISRQ 99
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 35.4 bits (80), Expect = 0.15
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 4 GLGSPASPRAAASASVAGSSGPAACSP---PSSSAPRSPESPAPR 45
G G PA P A +SAS + S P++ SP P P P PAPR
Sbjct: 180 GDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPR 224
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 35.0 bits (79), Expect = 0.20
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 5 LGSPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPR 45
L +P SP AAA+A+ A S P+A S S S+ P SPAPR
Sbjct: 180 LFTPLSPAAAAAAAAA--SAPSAGSSSSCSSASLPASPAPR 218
Score = 33.5 bits (75), Expect = 0.59
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 7 SPASPRAAASASVAGSSGPAACSP---PSSSAPRSPESPAPRRGGVRASVP 54
SPA+ AAA+AS + ++CS P+S APR+ +P R P
Sbjct: 185 SPAAAAAAAAASAPSAGSSSSCSSASLPASPAPRAARKASPSPSSARTQPP 235
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 35.0 bits (79), Expect = 0.20
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 8 PASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVP 54
P P ASAS G++GPA+ PP+ P P PA R VR P
Sbjct: 59 PQPPPGPASASGPGAAGPASSPPPAGPGP-GPALPAVRLSLVRLGEP 104
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 34.7 bits (78), Expect = 0.26
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 6 GSPASPRAAASASVAGSSGPAACSPPSS-----SAPRSPESPAPR 45
GSP +P AS A +GP SPPS+ P P +PAPR
Sbjct: 1102 GSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPAGPPAPAPR 1146
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 34.7 bits (78), Expect = 0.26
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 11 PRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRA 51
P AAA+AS+ GP A PS S+P P + AP RA
Sbjct: 84 PVAAAAASLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRA 124
>gi|7662002 ER degradation enhancer, mannosidase alpha-like 1
[Homo sapiens]
Length = 657
Score = 34.3 bits (77), Expect = 0.34
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 8 PASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGG 48
PASP + G SGP+ PP + A +SP APRR G
Sbjct: 52 PASPTSGPVGRPGGVSGPSWLQPPGTGAAQSPRK-APRRPG 91
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 33.9 bits (76), Expect = 0.45
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 SPASPRAAASASVAGSSGPAACS--PPSSSAPRSPESPAPRRGGVRASVPQKLA 58
S A+P AAA+A + G+ AA S P++S+ SP S +P SVP+ LA
Sbjct: 145 SSANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPLA 198
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 33.9 bits (76), Expect = 0.45
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESP 42
S +S +A+S+S + SS P SPP+SS PR E P
Sbjct: 94 SSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELP 129
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEM 60
+PA+ AA+S+S + SS ++ S SSS+ S SP P AS P ++ E+
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPP--ASPPASSPPRVLEL 128
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 33.9 bits (76), Expect = 0.45
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESP 42
S +S +A+S+S + SS P SPP+SS PR E P
Sbjct: 94 SSSSSSSASSSSSSSSSSPPPASPPASSPPRVLELP 129
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEM 60
+PA+ AA+S+S + SS ++ S SSS+ S SP P AS P ++ E+
Sbjct: 77 NPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPP--ASPPASSPPRVLEL 128
>gi|41352718 deltex homolog 1 [Homo sapiens]
Length = 620
Score = 33.9 bits (76), Expect = 0.45
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 35/120 (29%)
Query: 8 PASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRG-----------------GVR 50
P++ A+ A ++GPA +PP + PRSP +P R R
Sbjct: 249 PSATFTGAALWAAPAAGPAEPAPPPGAPPRSPGAPGGARTPGQNNLNRPGPQRTTSVSAR 308
Query: 51 ASVPQKLAEM--------------LSSQYGLIVFVAGLLLLLAWA----VHAAGVSKSDL 92
AS+P + + L+ G+++ AGL + L A +H VSKSD+
Sbjct: 309 ASIPPGVPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPKPILHPPPVSKSDV 368
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 33.5 bits (75), Expect = 0.59
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 6 GSPASPRAAASASVAGSSGPAACSPPSSSAPRSPES----PAPR 45
G PA P AA+ S GS G A S PS +APR P + PAPR
Sbjct: 853 GRPALPSPAAARSARGSWGLRA-SRPSRAAPRGPPNFQRCPAPR 895
>gi|118200352 hypothetical protein LOC642273 [Homo sapiens]
Length = 321
Score = 33.5 bits (75), Expect = 0.59
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 8 PASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEMLSSQY 65
P +P AA + + PAA S SS P +P P PR VR Q+ LSS+Y
Sbjct: 153 PTTPGPAADPATPETPAPAARSAAPSSVPAAPPGPEPR--VVRRRGLQRSQSDLSSRY 208
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 33.1 bits (74), Expect = 0.77
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 7 SPASPR-AAASASVAGSSGPAACS---PPS----SSAPRSPES-----PAPRRGGVRASV 53
+PA+P AA SA+ A GPAA S PPS SSAPR P S P G R S
Sbjct: 1413 APAAPEDAATSAAAAPGEGPAAPSSAPPPSNSSSSSAPRRPSSLQSLFGLPEAAGARDSR 1472
Query: 54 PQKLAEMLSSQYGLIV 69
L + ++ I+
Sbjct: 1473 DNPLRKKKAANLNSII 1488
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.1 bits (74), Expect = 0.77
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPE-----SPAPRRGGVRASVPQKLAEML 61
SPA P +A S S+ P+A +P + P +P+ +P PR VRAS P + L
Sbjct: 2177 SPARP-SAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQAL 2235
Query: 62 SSQYGLIVFVAGLLLLLAWAVHAAGVSK 89
+ + A ++ L + HA G S+
Sbjct: 2236 QTLALPLTPYAQIIQSLQLSGHAQGPSQ 2263
>gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens]
Length = 534
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 435 EKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKD 494
E Q L +++ +P K+ E L NG T+P A S KS V D P K
Sbjct: 217 ELLAQKLPLWQQACADPSKIPERAVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKP 276
Query: 495 MP 496
+P
Sbjct: 277 LP 278
>gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens]
Length = 520
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 435 EKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKD 494
E Q L +++ +P K+ E L NG T+P A S KS V D P K
Sbjct: 217 ELLAQKLPLWQQACADPSKIPERAVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKP 276
Query: 495 MP 496
+P
Sbjct: 277 LP 278
>gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens]
Length = 521
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 435 EKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKD 494
E Q L +++ +P K+ E L NG T+P A S KS V D P K
Sbjct: 217 ELLAQKLPLWQQACADPSKIPERAVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKP 276
Query: 495 MP 496
+P
Sbjct: 277 LP 278
>gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens]
Length = 552
Score = 32.7 bits (73), Expect = 1.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 435 EKYIQNLFIFESIHREPEKLSEDIQTLRVVTVCNGNTMPLASSCPKSGGVARDVAPQGKD 494
E Q L +++ +P K+ E L NG T+P A S KS V D P K
Sbjct: 217 ELLAQKLPLWQQACADPSKIPERAVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKP 276
Query: 495 MP 496
+P
Sbjct: 277 LP 278
>gi|4557265 beta-1-adrenergic receptor [Homo sapiens]
Length = 477
Score = 32.7 bits (73), Expect = 1.0
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRASVPQKLAEMLSSQYG 66
S A+P +A+ A PA SPP+S P + ESP P L++ ++ G
Sbjct: 17 SSAAPLPDGAATAARLLVPA--SPPASLLPPASESPEP------------LSQQWTAGMG 62
Query: 67 LIVFVAGLLLLLAWAVHAAGVSKSDLLCFLTALMLLQL 104
L++ + LL++ + ++K+ L LT L ++ L
Sbjct: 63 LLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSL 100
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 32.7 bits (73), Expect = 1.0
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 8 PASPRAAASASVAGSSGPAACSPPSSSAPRSPESPA-PRRGGVRASVPQKLAEMLSSQYG 66
PA P ASV+ + P +PP+ + P +PA P+R G SV L +
Sbjct: 140 PARPPPPPPASVSPQAEPV-WTPPAPAPAAPPSTPAAPKRRGSSGSVVVDLLYWRDIKKT 198
Query: 67 LIVFVAGLLLLLAWAV 82
+VF A L LLL+ V
Sbjct: 199 GVVFGASLFLLLSLTV 214
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 32.7 bits (73), Expect = 1.0
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 4 GLGSPASPRAAASASVAGSSGPAACSPPSSSA-PRSPES---PAPRRGGVRASVP 54
G GSPA+ AASA A + PAA + P S A P P+S PA G A+ P
Sbjct: 377 GYGSPAA--GAASADTAARAAPAAPADPDSGATPEDPDSGTAPADPDSGAFAADP 429
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 32.7 bits (73), Expect = 1.0
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 7 SPASPRAAASASVAGSSGPAACSPPSSSAPRSPESPAPRRGGVRA 51
+P P A + GPA CSP + + P P PAP+R RA
Sbjct: 15 APGCPEVAPQPEGTDAPGPAVCSPTARAPP--PILPAPQRPPTRA 57
>gi|109689699 transmembrane protein 80 isoform 2 [Homo sapiens]
Length = 168
Score = 32.7 bits (73), Expect = 1.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 17 ASVAGSSGPAACSPPSSSAPRSPESPAPRRGG----VRASVPQKLAEMLSSQYGLIVFVA 72
A A + GP C A + + APRRG V +SVP ++ LS Y + F+A
Sbjct: 2 AEGARARGPRGCRDRDGPAGGAGKMAAPRRGRGSSTVLSSVPLQMLFYLSGTYYALYFLA 61
Query: 73 GLLLL 77
LL++
Sbjct: 62 TLLMI 66
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,059,499
Number of Sequences: 37866
Number of extensions: 1122336
Number of successful extensions: 9155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 8718
Number of HSP's gapped (non-prelim): 494
length of query: 612
length of database: 18,247,518
effective HSP length: 108
effective length of query: 504
effective length of database: 14,157,990
effective search space: 7135626960
effective search space used: 7135626960
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.