OTOP1 25044

Name: OTOP1	Sequence: fasta or formatted (612aa)		NCBI GI: 29725635
Description: otopetrin 1		Referenced in: Auditory and Vestibular Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 54 3 C cysteine 2.3 14 1 D aspartate 2.6 16 2 E glutamate 4.9 30 3 F phenylalanine 4.2 26 1 G glycine 7.5 46 2 H histidine 2.9 18 1 I isoleucine 6.7 41 2 K lysine 4.2 26 1 L leucine 12.3 75 5 M methionine 2.5 15 1 N asparagine 3.3 20 1 P proline 5.2 32 2 Q glutamine 2.6 16 1 R arginine 4.6 28 2 S serine 8.8 54 3 T threonine 4.2 26 2 V valine 6.9 42 4 W tryptophan 2.1 13 1 Y tyrosine 3.3 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 otopetrin 1 OTOP2 0.251 otopetrin 2 OTOP3 0.214 otopetrin 3 LOC100130174 0.012 PREDICTED: hypothetical protein LOC100130174 0.012 PREDICTED: hypothetical protein LOC388564 0.010 PREDICTED: hypothetical protein LOC388564 0.010 PREDICTED: hypothetical protein SCAF1 0.008 SR-related CTD-associated factor 1 LOC100130174 0.008 PREDICTED: hypothetical protein DMWD 0.008 dystrophia myotonica-containing WD repeat motif prot... SETD1A 0.008 SET domain containing 1A GLCCI1 0.008 glucocorticoid induced transcript 1 EDEM1 0.007 ER degradation enhancer, mannosidase alpha-like 1 [Ho... OTX1 0.007 orthodenticle homeobox 1 ZBTB4 0.007 zinc finger and BTB domain containing 4 ZBTB4 0.007 zinc finger and BTB domain containing 4 DTX1 0.007 deltex homolog 1 LOC100290023 0.007 PREDICTED: hypothetical protein XP_002348147 FAM110C 0.007 hypothetical protein LOC642273 CUX1 0.007 cut-like homeobox 1 isoform a SPEG 0.007 SPEG complex locus BAIAP2 0.007 BAI1-associated protein 2 isoform 4 BAIAP2 0.007 BAI1-associated protein 2 isoform 3 BAIAP2 0.007 BAI1-associated protein 2 isoform 1 BAIAP2 0.007 BAI1-associated protein 2 isoform 2 ADRB1 0.007 beta-1-adrenergic receptor RTN4 0.007 reticulon 4 isoform B GNAS 0.007 GNAS complex locus XLas LOC643355 0.007 PREDICTED: hypothetical protein TMEM80 0.007 transmembrane protein 80 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.