CCDC61 2534

Name: CCDC61	Sequence: fasta or formatted (531aa)		NCBI GI: 122937207
Description: coiled-coil domain containing 61		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 45 2 C cysteine 0.8 4 1 D aspartate 4.1 22 1 E glutamate 7.9 42 2 F phenylalanine 2.1 11 1 G glycine 9.6 51 2 H histidine 2.4 13 2 I isoleucine 2.1 11 2 K lysine 3.8 20 1 L leucine 10.0 53 2 M methionine 2.3 12 1 N asparagine 2.6 14 1 P proline 5.6 30 2 Q glutamine 4.9 26 3 R arginine 12.2 65 3 S serine 10.4 55 3 T threonine 3.4 18 1 V valine 4.3 23 2 W tryptophan 1.1 6 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 61 SFRS16 0.022 splicing factor, arginine/serine-rich 16 ZC3H18 0.021 zinc finger CCCH-type containing 18 CHERP 0.021 calcium homeostasis endoplasmic reticulum protein [... PLEC1 0.020 plectin 1 isoform 11 PLEC1 0.020 plectin 1 isoform 10 PLEC1 0.020 plectin 1 isoform 8 PLEC1 0.020 plectin 1 isoform 7 PLEC1 0.020 plectin 1 isoform 6 PLEC1 0.020 plectin 1 isoform 3 PLEC1 0.020 plectin 1 isoform 2 PLEC1 0.020 plectin 1 isoform 1 SFRS6 0.019 arginine/serine-rich splicing factor 6 MAP3K10 0.018 mitogen-activated protein kinase kinase kinase 10 [H... SFRS4 0.018 splicing factor, arginine/serine-rich 4 SCAF1 0.018 SR-related CTD-associated factor 1 CROCC 0.017 ciliary rootlet coiled-coil SMTNL2 0.017 smoothelin-like 2 isoform 1 AMOTL2 0.017 angiomotin like 2 MYH14 0.017 myosin, heavy chain 14 isoform 1 MYH14 0.017 myosin, heavy chain 14 isoform 2 MYH14 0.017 myosin, heavy chain 14 isoform 3 CCDC13 0.016 coiled-coil domain containing 13 CGN 0.016 cingulin LOC100293776 0.016 PREDICTED: hypothetical protein LOC100290946 0.016 PREDICTED: hypothetical protein XP_002347121 LOC100288840 0.016 PREDICTED: hypothetical protein XP_002344246 LOC100288658 0.016 PREDICTED: hypothetical protein XP_002342750 LOC100288658 0.016 PREDICTED: hypothetical protein SRRM2 0.015 splicing coactivator subunit SRm300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.