Guide to the Human Genome
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Name: AMOTL2 Sequence: fasta or formatted (780aa) NCBI GI: 32484977
Description:

angiomotin like 2

Referenced in:

Cardiovascular System

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.9         93           5
 C cysteine            0.5          4           1
 D aspartate           3.2         25           1
 E glutamate           9.9         77           3
 F phenylalanine       0.9          7           1
 G glycine             6.7         52           2
 H histidine           3.1         24           1
 I isoleucine          1.8         14           1
 K lysine              3.1         24           2
 L leucine            10.9         85           2
 M methionine          1.7         13           1
 N asparagine          1.5         12           1
 P proline             6.5         51           4
 Q glutamine          10.1         79           5
 R arginine            9.6         75           3
 S serine              9.0         70           3
 T threonine           4.6         36           3
 V valine              3.2         25           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.5         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angiomotin like 2 
AMOTL1                0.340   angiomotin like 1 
AMOT                  0.282   angiomotin isoform 1 
AMOT                  0.247   angiomotin isoform 2 
PLEC1                 0.036   plectin 1 isoform 11 
PLEC1                 0.036   plectin 1 isoform 10 
PLEC1                 0.036   plectin 1 isoform 8 
PLEC1                 0.036   plectin 1 isoform 7 
PLEC1                 0.036   plectin 1 isoform 6 
PLEC1                 0.036   plectin 1 isoform 3 
PLEC1                 0.036   plectin 1 isoform 2 
PLEC1                 0.036   plectin 1 isoform 1 
LOC400352             0.033   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.033   PREDICTED: similar to Putative golgin subfamily A m...
CCDC88C               0.032   DVL-binding protein DAPLE 
CGN                   0.032   cingulin 
MYH13                 0.031   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GOLGA2                0.030   Golgi autoantigen, golgin subfamily a, 2 
CCDC88B               0.030   coiled-coil domain containing 88 
MYH14                 0.030   myosin, heavy chain 14 isoform 1 
MYH14                 0.030   myosin, heavy chain 14 isoform 2 
MYH14                 0.030   myosin, heavy chain 14 isoform 3 
TCHH                  0.030   trichohyalin 
ROCK2                 0.029   Rho-associated, coiled-coil containing protein kinas...
MYH7B                 0.029   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
LOC100133758          0.029   PREDICTED: hypothetical protein, partial 
KIF7                  0.029   kinesin family member 7 
CEP250                0.028   centrosomal protein 2 
MYH6                  0.028   myosin heavy chain 6 
MYH7                  0.027   myosin, heavy chain 7, cardiac muscle, beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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