UFD1L 24998

Name: UFD1L	Sequence: fasta or formatted (307aa)		NCBI GI: 29501813
Description: ubiquitin fusion degradation 1-like isoform A		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [266aa] ubiquitin fusion degradation 1-like isoform B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 15 1 C cysteine 1.6 5 1 D aspartate 5.5 17 1 E glutamate 7.8 24 2 F phenylalanine 5.9 18 1 G glycine 8.1 25 2 H histidine 1.6 5 1 I isoleucine 5.2 16 2 K lysine 7.2 22 3 L leucine 7.8 24 3 M methionine 3.3 10 2 N asparagine 5.5 17 1 P proline 6.5 20 2 Q glutamine 3.6 11 1 R arginine 5.5 17 1 S serine 6.8 21 1 T threonine 3.6 11 2 V valine 6.2 19 1 W tryptophan 0.3 1 1 Y tyrosine 2.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin fusion degradation 1-like isoform A UFD1L 0.867 ubiquitin fusion degradation 1-like isoform B [Homo... SPAG1 0.013 sperm associated antigen 1 SPAG1 0.013 sperm associated antigen 1 FIZ1 0.012 FLT3-interacting zinc finger 1 NAT5 0.008 N-acetyltransferase 5 isoform a NAT5 0.008 N-acetyltransferase 5 isoform b ZNF497 0.008 zinc finger protein 497 COL11A2 0.007 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.007 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.007 collagen, type XI, alpha 2 isoform 1 preproprotein ... NKTR 0.007 natural killer-tumor recognition sequence DCLK1 0.005 doublecortin-like kinase 1 CNOT1 0.005 CCR4-NOT transcription complex, subunit 1 isoform b ... CNOT1 0.005 CCR4-NOT transcription complex, subunit 1 isoform a ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.