CCDC116 24997

Name: CCDC116	Sequence: fasta or formatted (613aa)		NCBI GI: 29501809
Description: coiled-coil domain containing 116		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 34 2 C cysteine 2.4 15 1 D aspartate 5.2 32 2 E glutamate 7.0 43 2 F phenylalanine 3.1 19 2 G glycine 5.7 35 2 H histidine 3.4 21 2 I isoleucine 1.1 7 1 K lysine 6.2 38 3 L leucine 10.9 67 3 M methionine 2.1 13 1 N asparagine 1.8 11 2 P proline 8.5 52 2 Q glutamine 5.1 31 2 R arginine 7.7 47 2 S serine 13.7 84 5 T threonine 4.6 28 1 V valine 4.1 25 2 W tryptophan 0.5 3 1 Y tyrosine 1.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 116 UBTF 0.014 upstream binding transcription factor, RNA polymera... UBTF 0.014 upstream binding transcription factor, RNA polymera... UBTF 0.014 upstream binding transcription factor, RNA polymerase... CCDC9 0.013 coiled-coil domain containing 9 CALR 0.012 calreticulin precursor TAF7L 0.012 TATA box binding protein-associated factor, RNA poly... NCL 0.010 nucleolin ATAD2 0.010 ATPase family, AAA domain containing 2 NRD1 0.010 nardilysin isoform b NRD1 0.010 nardilysin isoform a ANP32E 0.010 acidic (leucine-rich) nuclear phosphoprotein 32 fam... LOC645490 0.010 PREDICTED: similar to hCG1991922 LOC645490 0.010 PREDICTED: similar to hCG1991922 CASZ1 0.010 castor homolog 1, zinc finger isoform a LOC647020 0.009 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.009 PREDICTED: similar to acidic (leucine-rich) nuclear... GTF2A1 0.009 TFIIA alpha, p55 isoform 2 GTF2A1 0.009 TFIIA alpha, p55 isoform 1 MYST4 0.009 MYST histone acetyltransferase (monocytic leukemia)... ESF1 0.009 ABT1-associated protein MTERFD2 0.009 MTERF domain containing 2 RDBP 0.009 RD RNA-binding protein ANP32E 0.009 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ANP32E 0.009 acidic (leucine-rich) nuclear phosphoprotein 32 fam... RAD54L2 0.009 RAD54-like 2 CHIC1 0.009 cysteine-rich hydrophobic domain 1 MACF1 0.008 microfilament and actin filament cross-linker protei... MACF1 0.008 microfilament and actin filament cross-linker protei... POLE3 0.008 DNA-directed DNA polymerase epsilon 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.