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Search of human proteins with 28626521
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
(1918 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 3955 0.0
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 133 1e-30
gi|38788372 aquarius [Homo sapiens] 121 7e-27
gi|89363020 nuclear transcription factor, X-box binding-like 1 [... 103 1e-21
gi|21361137 nuclear transcription factor, X-box binding 1 isofor... 93 3e-18
gi|22212925 nuclear transcription factor, X-box binding 1 isofor... 92 6e-18
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 91 1e-17
gi|113722133 senataxin [Homo sapiens] 90 2e-17
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 85 8e-16
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 79 4e-14
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 79 4e-14
gi|22212927 nuclear transcription factor, X-box binding 1 isofor... 79 6e-14
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 71 9e-12
gi|14251207 MOV10-like 1 [Homo sapiens] 68 8e-11
gi|38490571 keratin associated protein 10-7 [Homo sapiens] 68 8e-11
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 66 3e-10
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 63 2e-09
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 63 2e-09
gi|154759251 keratin associated protein 10-9 [Homo sapiens] 63 2e-09
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens] 62 5e-09
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens] 62 5e-09
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens] 62 5e-09
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 62 7e-09
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 62 7e-09
gi|54792138 helicase with zinc finger domain [Homo sapiens] 61 9e-09
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 61 9e-09
gi|153218552 keratin associated protein 9.8 [Homo sapiens] 61 1e-08
gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3... 59 3e-08
gi|239756798 PREDICTED: similar to keratin associated protein 4-... 59 3e-08
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 59 3e-08
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 3955 bits (10257), Expect = 0.0
Identities = 1918/1918 (100%), Positives = 1918/1918 (100%)
Query: 1 MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALRGGASHPGRHPRANNHP 60
MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALRGGASHPGRHPRANNHP
Sbjct: 1 MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALRGGASHPGRHPRANNHP 60
Query: 61 AAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQENDTRWRNGNQDCRNRRPPWS 120
AAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQENDTRWRNGNQDCRNRRPPWS
Sbjct: 61 AAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQENDTRWRNGNQDCRNRRPPWS 120
Query: 121 NDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSSMK 180
NDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSSMK
Sbjct: 121 NDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSSMK 180
Query: 181 SNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLKVCLPAYVVGMITEPIPDIRNQY 240
SNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLKVCLPAYVVGMITEPIPDIRNQY
Sbjct: 181 SNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLKVCLPAYVVGMITEPIPDIRNQY 240
Query: 241 PEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTSLNALRASGVDIEEETEKNLEKVQT 300
PEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTSLNALRASGVDIEEETEKNLEKVQT
Sbjct: 241 PEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTSLNALRASGVDIEEETEKNLEKVQT 300
Query: 301 IIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG 360
IIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG
Sbjct: 301 IIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG 360
Query: 361 KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPM 420
KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPM
Sbjct: 361 KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPM 420
Query: 421 CSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG 480
CSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG
Sbjct: 421 CSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG 480
Query: 481 IVQLCFNEQSQQLLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECN 540
IVQLCFNEQSQQLLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECN
Sbjct: 481 IVQLCFNEQSQQLLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECN 540
Query: 541 SHVKEPRYLLMGGRYDFTPLIENPSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDD 600
SHVKEPRYLLMGGRYDFTPLIENPSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDD
Sbjct: 541 SHVKEPRYLLMGGRYDFTPLIENPSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDD 600
Query: 601 SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNH 660
SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNH
Sbjct: 601 SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNH 660
Query: 661 ALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT 720
ALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT
Sbjct: 661 ALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT 720
Query: 721 QMKESEQELHEGAKTLECTMRGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHS 780
QMKESEQELHEGAKTLECTMRGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHS
Sbjct: 721 QMKESEQELHEGAKTLECTMRGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHS 780
Query: 781 MMLEWLGLGVGSFTQSVSPAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEE 840
MMLEWLGLGVGSFTQSVSPAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEE
Sbjct: 781 MMLEWLGLGVGSFTQSVSPAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEE 840
Query: 841 EEVVRPQRRKKEESGADQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKR 900
EEVVRPQRRKKEESGADQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKR
Sbjct: 841 EEVVRPQRRKKEESGADQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKR 900
Query: 901 VKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSA 960
VKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSA
Sbjct: 901 VKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSA 960
Query: 961 ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL 1020
ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL
Sbjct: 961 ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL 1020
Query: 1021 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIA 1080
SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIA
Sbjct: 1021 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIA 1080
Query: 1081 RLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVEL 1140
RLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVEL
Sbjct: 1081 RLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVEL 1140
Query: 1141 CKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLV 1200
CKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLV
Sbjct: 1141 CKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLV 1200
Query: 1201 RSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPML 1260
RSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPML
Sbjct: 1201 RSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPML 1260
Query: 1261 RLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK 1320
RLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK
Sbjct: 1261 RLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK 1320
Query: 1321 PCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSL 1380
PCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSL
Sbjct: 1321 PCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSL 1380
Query: 1381 RCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILD 1440
RCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILD
Sbjct: 1381 RCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILD 1440
Query: 1441 CGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK 1500
CGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK
Sbjct: 1441 CGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK 1500
Query: 1501 KKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK 1560
KKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK
Sbjct: 1501 KKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK 1560
Query: 1561 KCRICHMDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCP 1620
KCRICHMDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCP
Sbjct: 1561 KCRICHMDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCP 1620
Query: 1621 ICQVPIRKNLRYGTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPE 1680
ICQVPIRKNLRYGTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPE
Sbjct: 1621 ICQVPIRKNLRYGTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPE 1680
Query: 1681 DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEW 1740
DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEW
Sbjct: 1681 DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEW 1740
Query: 1741 LAKKRLSFTSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCK 1800
LAKKRLSFTSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCK
Sbjct: 1741 LAKKRLSFTSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCK 1800
Query: 1801 FTQEDEQLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDC 1860
FTQEDEQLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDC
Sbjct: 1801 FTQEDEQLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDC 1860
Query: 1861 GGAMERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM 1918
GGAMERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM
Sbjct: 1861 GGAMERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM 1918
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 133 bits (335), Expect = 1e-30
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 27/341 (7%)
Query: 938 LQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQK 997
LQ + +T + E++YR + +R AE L L +A V+ T GA R L K
Sbjct: 577 LQQLKDETGELSSADEKRYR-ALKRTAEREL------LMNADVICCTCVGAGDPR--LAK 627
Query: 998 VEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFE 1057
++ R ++++E+ + E + + + LIL+GDH QL P AK L SLFE
Sbjct: 628 MQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA-GLSQSLFE 686
Query: 1058 RLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQ-DLENHPSVLKYEKIKGVSSN------- 1109
RLV + I +RL Q+RM P ++ + Y+ L+N + K KG
Sbjct: 687 RLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQWPQPDKP 745
Query: 1110 LFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLRK 1169
+FF E+ G S+ N+ EA V ++ L P QI I+T Y GQ L +
Sbjct: 746 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQ 805
Query: 1170 LMP------AKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSR 1223
M K + V + VD +QG E D I+LS VR+N+ +GFL R+ VAL+R
Sbjct: 806 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 865
Query: 1224 AKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQI--GPMLRL 1262
A+ G+ +GN + L+K PLW+ +++ +E + GP+ L
Sbjct: 866 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNL 906
Score = 50.1 bits (118), Expect = 2e-05
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 587 PGQWPSKEALKLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQIS 646
P ++ ++ L+ SQ+ A++ L R L++IQGPPGTGKT IV L +
Sbjct: 460 PKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGN----- 514
Query: 647 LQKFPILVVCYTNHALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRN 706
P+LV +N A+DQ E I+ +VR+ +S I + L N+ +
Sbjct: 515 ---GPVLVCAPSNIAVDQLTEKIHQ-TGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDS 570
Query: 707 LPMHLRRAYMSIMTQMKESEQEL 729
+P + + Q+K+ EL
Sbjct: 571 MP------ELQKLQQLKDETGEL 587
>gi|38788372 aquarius [Homo sapiens]
Length = 1485
Score = 121 bits (303), Expect = 7e-27
Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 947 RKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRI--VI 1004
+KI + ++R S + L + L ++K+A+++ MT T AA R L K+ + ++
Sbjct: 1002 KKIFTQLEEFRASELLRSGLDRSKYL-LVKEAKIIAMTCTHAALKRHDLVKLGFKYDNIL 1060
Query: 1005 VEEAAEVLEAHTIATLS--------KACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLF 1056
+EEAA++LE T L + I+IGDH QL P K N+E SLF
Sbjct: 1061 MEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLF 1120
Query: 1057 ERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHN 1116
R V+V +P V L+ Q R + L Y++L N P V + ++ L +
Sbjct: 1121 TRFVRVGVPTVDLDAQGRARASLCNLYNWR-YKNLGNLPHVQLLPEFSTANAGLLYDFQL 1179
Query: 1117 FPEQEIQ-EGKS------HQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLRK 1169
++ Q G+S +QN EA +VV L Y Y +I+ILTTY GQ +R
Sbjct: 1180 INVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRD 1239
Query: 1170 LMPAKTFAGV------RVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSR 1223
++ + +V VD++QG++ND ILLSLVR+ VG L+ R+ VA+SR
Sbjct: 1240 IINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGHLRDVRRLVVAMSR 1296
Query: 1224 AKKGMYCIGNMQM 1236
A+ G+Y + +
Sbjct: 1297 ARLGLYIFARVSL 1309
Score = 48.5 bits (114), Expect = 6e-05
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 587 PGQWPSKEALKLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQIS 646
P P + ++ +Q+EA++ + L ++ GPPGTGKT V ++I+ + N
Sbjct: 791 PYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHN------- 843
Query: 647 LQKFP---ILVVCYTNHALDQFLEGI--YNCQKTSIVRVG-GRSNSEILKQFT 693
FP L+V ++N AL+Q E I + + ++R+G G E K F+
Sbjct: 844 ---FPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFS 893
>gi|89363020 nuclear transcription factor, X-box binding-like 1 [Homo
sapiens]
Length = 911
Score = 103 bits (258), Expect = 1e-21
Identities = 92/318 (28%), Positives = 121/318 (38%), Gaps = 78/318 (24%)
Query: 1298 CGHVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQ-ECQPCQVKVPKTIPRCG 1356
CG VC R P PC GH+C L+C C PC K+ T C
Sbjct: 253 CGQVCEREFKP------------PC-------GHKCLLLCHPGPCPPCP-KMVTTTCYCK 292
Query: 1357 HEQMVPCSVPESDFCCQEPCSKSLRCG-HRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVK 1415
+ +P ++ CQ PC + L CG H+C +PC Q C + K CG
Sbjct: 293 KAKPIPRRCSAKEWSCQLPCGQKLLCGQHKCENPCHAGSCQPCPRVSRQKCVCGKK---- 348
Query: 1416 CGHVEGLLYGGLLVKCTTKCGTILDCG-HPCPGSCH---------------SCFEGRFH- 1458
V L C CG L CG H C CH C + +F
Sbjct: 349 ---VAERSCASPLWHCDQVCGKTLPCGNHTCEQVCHVGACGECPRSGKRFCPCQKSKFSL 405
Query: 1459 ------ERCQQPCKRLLICS-HKCQEPC-IGECPPCQRTCQNRCVHSQCKKKCGELCSPC 1510
C C ++L C H+C + C G C C++ + C +C K + PC
Sbjct: 406 PCTEDVPTCGDSCDKVLECGIHRCSQRCHRGPCETCRQEVEKHC---RCGKHTKRM--PC 460
Query: 1511 VEP------CVWR--CQHYQCTKLCSEPCNRPPCYVPCTKLLVC-GHPCIGLCGE----P 1557
+P CV CQ +QC + C P N PPC C + L C H C +C P
Sbjct: 461 HKPYLCETKCVKMRDCQKHQCRRKCC-PGNCPPCDQNCGRTLGCRNHKCPSVCHRGSCYP 519
Query: 1558 CPK----KCRICHMDEVT 1571
CP+ KC C +VT
Sbjct: 520 CPETVDVKCN-CGNTKVT 536
Score = 103 bits (257), Expect = 2e-21
Identities = 98/317 (30%), Positives = 119/317 (37%), Gaps = 67/317 (21%)
Query: 1285 EGGCSLPCEFRLGCG-HVCTRACH-------PYDSSHK--------EFQCMKP------- 1321
E C LPC +L CG H C CH P S K E C P
Sbjct: 305 EWSCQLPCGQKLLCGQHKCENPCHAGSCQPCPRVSRQKCVCGKKVAERSCASPLWHCDQV 364
Query: 1322 CQKVICQEGHRCPLVC-FQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSL 1380
C K + H C VC C C + P + +PC+ E C + C K L
Sbjct: 365 CGKTLPCGNHTCEQVCHVGACGECPRSGKRFCPCQKSKFSLPCT--EDVPTCGDSCDKVL 422
Query: 1381 RCG-HRCSHPCGEDCVQLCSEMVTIKLKCG-HSQPVKCGHVEGLLYGGLLVKCTTKCGTI 1438
CG HRCS C + C + V +CG H++ + C H L C TKC +
Sbjct: 423 ECGIHRCSQRCHRGPCETCRQEVEKHCRCGKHTKRMPC-HKPYL--------CETKCVKM 473
Query: 1439 LDCGHP------CPGSCHSCFEGRFHERCQQPCKRLLIC-SHKCQEPC-IGECPPCQRT- 1489
DC CPG+C C Q C R L C +HKC C G C PC T
Sbjct: 474 RDCQKHQCRRKCCPGNC---------PPCDQNCGRTLGCRNHKCPSVCHRGSCYPCPETV 524
Query: 1490 -----CQNRCVHSQCKKKCGELCSPCVEPCVW--RCQHYQCTKLCSEPCNRPPCYVPCTK 1542
C N V C ++ C E C C H K + PPC+ PC K
Sbjct: 525 DVKCNCGNTKVTVPCGRERTTRPPKCKEQCSRPPTCHHTSQEKHRCHFGSCPPCHQPCQK 584
Query: 1543 LL-VCGHPCIGLCGEPC 1558
+L CGH LC PC
Sbjct: 585 VLEKCGH----LCPAPC 597
Score = 64.3 bits (155), Expect = 1e-09
Identities = 95/393 (24%), Positives = 137/393 (34%), Gaps = 75/393 (19%)
Query: 1251 RENNQIGPMLRLCCQNHPETHTLVSKAS--DFQKVPEGGCSLPCEFRLG-CGHVCTRACH 1307
RE P + C P H + F P C PC+ L CGH+C CH
Sbjct: 541 RERTTRPPKCKEQCSRPPTCHHTSQEKHRCHFGSCPP--CHQPCQKVLEKCGHLCPAPCH 598
Query: 1308 PYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQE------------CQPCQVKVPKTIPRC 1355
Q +I Q G P +++ C PCQV +P
Sbjct: 599 D--------------QALIKQTGRHQPTGPWEQPSEPAFIQTALPCPPCQVPIPMECLGK 644
Query: 1356 GHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGEDCVQLC-SEMVTIKLKCGHSQPV 1414
+PC + C+ C + L C +H C ++C ++ ++ T K K G
Sbjct: 645 HEVSPLPCHA-VGPYSCKRVCGRILDCQ---NHTCMKECHKVTKTDGCTGKNKAG----P 696
Query: 1415 KCGHVEGLLYGGLLVKCTTKCGTI--LDCGHPC-----PGSCHSCFEGRFHERCQQPCKR 1467
+C H C C L C HPC PG C C + +C
Sbjct: 697 ECLH------------CEEGCSKSRPLGCLHPCILRCHPGECPPCVQ-MLRIKCHCKITS 743
Query: 1468 LLICSHKCQEPCIGECPPCQRTCQNRCVHS-QCKKKCGELCSPCVEPCVWRCQHYQCTKL 1526
L + K + E C+N+C C +C E+C P C + C Q KL
Sbjct: 744 LYVECRKITTADVNE-KNLLSCCKNQCPKELPCGHRCKEMCHP--GECPFNCN--QKVKL 798
Query: 1527 -CSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPKKCRICHMDEVTQIFFGFEDEPDARF 1585
C PC R + C K V + C C + R + + E+E +
Sbjct: 799 RC--PCKRIKKELQCNK--VRENQVSIECDTTCKEMKRKASEIKEAEAKAALEEEKRRQQ 854
Query: 1586 VQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKV 1618
+LE FE + R +K DEVA+ L +
Sbjct: 855 AELE----AFENRLKGRRKKNRKRDEVAVELSL 883
>gi|21361137 nuclear transcription factor, X-box binding 1 isoform 1
[Homo sapiens]
Length = 1120
Score = 92.8 bits (229), Expect = 3e-18
Identities = 93/336 (27%), Positives = 121/336 (36%), Gaps = 78/336 (23%)
Query: 1288 CSLPCEFRLGCG-HVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQEC----- 1341
C C L CG H C++ CHP QC + Q V C + PL E
Sbjct: 557 CLKICGKDLKCGNHTCSQVCHPQPCQ----QCPRLPQLVRCCPCGQTPLSQLLELGSSSR 612
Query: 1342 QPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQE--------PCSKSLRCGHRCSH----- 1388
+ C VP CG + +PC + C++ PCS++ RCS
Sbjct: 613 KTCMDPVPSCGKVCG--KPLPCGSLDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKEL 670
Query: 1389 PC----GEDCVQLCSEMVTIKLKCGHSQ--PVKCGHVEGLLYGGLLVKCTTKCGTILDCG 1442
PC ED +C + K CG + + C E KC CG L CG
Sbjct: 671 PCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEH--------KCPLICGRKLRCG 722
Query: 1443 -----HPCP-GSCHSCFEGRFHE---------------------RCQQPCKRLLICSHKC 1475
PC G+C +C++ F E C Q C R+ C H
Sbjct: 723 LHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPV 782
Query: 1476 QEPCIGE--CPPCQRTCQNRCVHS---QCKKKCGELCSPCVEPC--VWRCQHYQCTKLC- 1527
C E CPPC Q C+ + C + C PC C ++C +LC
Sbjct: 783 YHSCHSEEKCPPCTFLTQKWCMGKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCH 842
Query: 1528 -SEPCNRPPCYVPCTKLLV-CGHPCIGLC--GEPCP 1559
E PC PCT CGHPC+ C PCP
Sbjct: 843 KGECLVDEPCKQPCTTPRADCGHPCMAPCHTSSPCP 878
Score = 78.6 bits (192), Expect = 6e-14
Identities = 86/350 (24%), Positives = 116/350 (33%), Gaps = 97/350 (27%)
Query: 1298 CGHVCTRACHPYD-----------------------SSHKEFQCMKPCQKVICQEGHRCP 1334
C H C CHP C PC+ ++ H+C
Sbjct: 453 CPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCA 512
Query: 1335 LVCF-QECQPCQVKVPKTIPRCG---HEQMVPCSVPES----DFCCQEPCSKSLRCG-HR 1385
+C +CQPCQ+ + + CG + + V +S DF C + C K L+CG H
Sbjct: 513 ELCHGGQCQPCQI-ILNQVCYCGSTSRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHT 571
Query: 1386 CSHPCGEDCVQLCSEMVTIK--LKCGH---SQPVKCGHVEGLLYGGLLVKCTTKCGTILD 1440
CS C Q C + + CG SQ ++ G + C CG L
Sbjct: 572 CSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPLP 631
Query: 1441 CG-----HPCPGSCHSCFEGRFHERCQQPCKRLLICSHKC-----QEPCIG-ECPPCQRT 1489
CG H C CH G PC R + S +C + PC +
Sbjct: 632 CGSLDFIHTCEKLCHEGDCG--------PCSRTSVISCRCSFRTKELPCTSLKSEDATFM 683
Query: 1490 CQNRCVHSQC--KKKCGELC--------------------SPCVEPC-------VWRCQH 1520
C RC + + KC E+C C EPC W+
Sbjct: 684 CDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASF 743
Query: 1521 YQCTKLCSE-------PC-NRPP-CYVPCTKLLVCGHPCIGLC--GEPCP 1559
+ T C PC RPP C C ++ C HP C E CP
Sbjct: 744 DELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCP 793
>gi|22212925 nuclear transcription factor, X-box binding 1 isoform 2
[Homo sapiens]
Length = 1024
Score = 91.7 bits (226), Expect = 6e-18
Identities = 99/390 (25%), Positives = 128/390 (32%), Gaps = 125/390 (32%)
Query: 1288 CSLPCEFRLGCG-HVCTRACHP------------------------------YDSSHKEF 1316
CS PCE L CG H C CH +F
Sbjct: 496 CSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGSTSRDVLCGTDVGKSDGFGDF 555
Query: 1317 QCMKPCQKVICQEGHRCPLVCF-QECQPCQVKVPK------------------------- 1350
C+K C K + H C VC Q CQ C ++P+
Sbjct: 556 SCLKICGKDLKCGNHTCSQVCHPQPCQQCP-RLPQLVRCCPCGQTPLSQLLELGSSSRKT 614
Query: 1351 ---TIPRCGH--EQMVPCSVPESDFCCQE--------PCSKSLRCGHRCSH-----PC-- 1390
+P CG + +PC + C++ PCS++ RCS PC
Sbjct: 615 CMDPVPSCGKVCGKPLPCGSLDFIHTCEKLCHEGDCGPCSRTSVISCRCSFRTKELPCTS 674
Query: 1391 --GEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILDCG-----H 1443
ED +C + K CG KC + KC CG L CG
Sbjct: 675 LKSEDATFMCDKRCNKKRLCGRH---KCNEI---CCVDKEHKCPLICGRKLRCGLHRCEE 728
Query: 1444 PC-PGSCHSCFEGRFHE---------------------RCQQPCKRLLICSHKCQEPCIG 1481
PC G+C +C++ F E C Q C R+ C H C
Sbjct: 729 PCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHS 788
Query: 1482 E--CPPCQRTCQNRCV---HSQCKKKCGELCSPCVEPC--VWRCQHYQCTKLC--SEPCN 1532
E CPPC Q C+ + C + C PC C ++C +LC E
Sbjct: 789 EEKCPPCTFLTQKWCMGKHEFRSNIPCHLVDISCGLPCSATLPCGMHKCQRLCHKGECLV 848
Query: 1533 RPPCYVPCTKLLV-CGHPCIGLC--GEPCP 1559
PC PCT CGHPC+ C PCP
Sbjct: 849 DEPCKQPCTTPRADCGHPCMAPCHTSSPCP 878
Score = 78.6 bits (192), Expect = 6e-14
Identities = 86/350 (24%), Positives = 116/350 (33%), Gaps = 97/350 (27%)
Query: 1298 CGHVCTRACHPYD-----------------------SSHKEFQCMKPCQKVICQEGHRCP 1334
C H C CHP C PC+ ++ H+C
Sbjct: 453 CPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCA 512
Query: 1335 LVCF-QECQPCQVKVPKTIPRCG---HEQMVPCSVPES----DFCCQEPCSKSLRCG-HR 1385
+C +CQPCQ+ + + CG + + V +S DF C + C K L+CG H
Sbjct: 513 ELCHGGQCQPCQI-ILNQVCYCGSTSRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHT 571
Query: 1386 CSHPCGEDCVQLCSEMVTIK--LKCGH---SQPVKCGHVEGLLYGGLLVKCTTKCGTILD 1440
CS C Q C + + CG SQ ++ G + C CG L
Sbjct: 572 CSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPLP 631
Query: 1441 CG-----HPCPGSCHSCFEGRFHERCQQPCKRLLICSHKC-----QEPCIG-ECPPCQRT 1489
CG H C CH G PC R + S +C + PC +
Sbjct: 632 CGSLDFIHTCEKLCHEGDCG--------PCSRTSVISCRCSFRTKELPCTSLKSEDATFM 683
Query: 1490 CQNRCVHSQC--KKKCGELC--------------------SPCVEPC-------VWRCQH 1520
C RC + + KC E+C C EPC W+
Sbjct: 684 CDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASF 743
Query: 1521 YQCTKLCSE-------PC-NRPP-CYVPCTKLLVCGHPCIGLC--GEPCP 1559
+ T C PC RPP C C ++ C HP C E CP
Sbjct: 744 DELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCP 793
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 90.5 bits (223), Expect = 1e-17
Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 41/340 (12%)
Query: 949 ILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEA 1008
I + Q ++ + L L E+L+ ++Q++ TT + +K+ IV+EA
Sbjct: 795 IQQFTEQEICRSKSIKSLALLEELY---NSQLIVATTCMGINHPIFSRKIFD-FCIVDEA 850
Query: 1009 AEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVR 1068
+++ + + L + + +L+GDHQQL P + A+ + SLF+RL + V+
Sbjct: 851 SQISQPICLGPLFFS-RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQ 908
Query: 1069 LNYQHRMCPEIARLLTPHIYQDLENHPS------VLKYEKIKGVSSNL-FFVEHN----- 1116
L Q+RM +I L Y+ S V+ K V L F+ +++
Sbjct: 909 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWL 968
Query: 1117 -------------------FPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQITIL 1157
PEQ + G S N EA +V L F+ PS I I+
Sbjct: 969 MGVFEPNNPVCFLNTDKVPAPEQVEKGGVS--NVTEAKLIVFLTSIFVKAGCSPSDIGII 1026
Query: 1158 TTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVG-FLQISNR 1216
Y QL + L+ A++ V V+ VDKYQG + I+L+S VRSN++G VG L+ R
Sbjct: 1027 APYRQQLKIINDLL-ARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRR 1085
Query: 1217 ICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQI 1256
+ VA++RAK + +G + L P K+++ L I
Sbjct: 1086 LNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLI 1125
Score = 32.0 bits (71), Expect = 6.0
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 598 LDDSQMEALQ-FALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVC 656
L+ Q +A++ L+++ +I G PGTGKT +V+ L F +L+
Sbjct: 712 LNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYA---------CGFSVLLTS 762
Query: 657 YTNHALDQFLEGIYNCQKTSIVRVGG-RSNSEILKQFTLRELRNKREFR 704
YT+ A+D L + K +R+G + ++QFT +E+ + +
Sbjct: 763 YTHSAVDNILLKLAKF-KIGFLRLGQIQKVHPAIQQFTEQEICRSKSIK 810
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 89.7 bits (221), Expect = 2e-17
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 27/285 (9%)
Query: 1003 VIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSL---FERL 1059
VIV+EA + E T+ L C LIL+GD +QL P+ + A+ + + S+ F RL
Sbjct: 2178 VIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTV-ISMKAQEYGYDQSMMARFCRL 2236
Query: 1060 VKVNI--------PFVRLNYQHRMCPEIARLLTPHIYQDLENHPSVLKYEKIKGVSS--- 1108
++ N+ P ++L Q+RM P+I + ++Y N + + E I+ S
Sbjct: 2237 LEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYN--RNLKTNRQTEAIRCSSDWPF 2294
Query: 1109 NLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPS--QITILTTYTGQLFC 1166
+ V E ++ S+ N E V+E+ K + S I I+T Y Q
Sbjct: 2295 QPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFRNIGIITHYKAQKTM 2354
Query: 1167 LRKLMPAKTF---AGVRVHVVDKYQGEENDIILLSLVRSNQ-EGKVGFLQISNRICVALS 1222
++K + K F V VD +QG + D ++++ VR+N +G +GFL R+ V ++
Sbjct: 2355 IQKDLD-KEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTIT 2413
Query: 1223 RAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPMLRLCCQNH 1267
RAK ++ +G+++ L + W+++I ++ G +++ C +N+
Sbjct: 2414 RAKYSLFILGHLRTLMENQHWNQLIQDAQKR---GAIIKTCDKNY 2455
Score = 42.7 bits (99), Expect = 0.003
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 613 ELAIIQGPPGTGKTYVGLKIVQALLT-------NESVWQISLQKFPILVVCYTNHALDQF 665
++ +I GPPGTGK+ + ++ LLT ++ +++ +LV +N A+D+
Sbjct: 1957 KICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDEL 2016
Query: 666 LEGIY---------------NCQKTSIVRVGGRS--NSEILKQFTLRELRNKREFRRNLP 708
++ I NC ++VR+G NSE+LK F+L N R ++ LP
Sbjct: 2017 MKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLK-FSLDSQVNHR-MKKELP 2074
Query: 709 -----MHLRRAYMSIMTQMKESEQELHEGAKTLE 737
MH R+ ++ ++ L G + ++
Sbjct: 2075 SHVQAMHKRKEFLDYQLDELSRQRALCRGGREIQ 2108
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 84.7 bits (208), Expect = 8e-16
Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 21/323 (6%)
Query: 921 DVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQV 980
D Q+ R + +++++ + +R+ ++ + + + + E L L A V
Sbjct: 288 DSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANV 347
Query: 981 VGMTTTGAAKYR--QILQKVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRP 1038
V T TGA+ ++L + +V+++E A+ LEA L KA + IL GDH+QL P
Sbjct: 348 VLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA-RKCILAGDHKQLPP 406
Query: 1039 SANVYDLAKNFNLEVSLFERLVK-VNIPFVR-LNYQHRMCPEIARLLTPHIYQ-DLENHP 1095
+ V A L +SL ERL + VR L Q+RM I R + +Y L H
Sbjct: 407 TT-VSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS 465
Query: 1096 SVLKY--EKIKGVSSN------LFFVEH---NFPEQEIQEGKSHQNQHEAHFVVELCKYF 1144
SV ++ + GV++ L V+ E E ++ +S N E +V L
Sbjct: 466 SVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVR-LVSLHIQA 524
Query: 1145 LCQEYLPSQ-ITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSN 1203
L +P++ I +++ Y Q+ LR+ + + + + VD +QG E + ++LS VRSN
Sbjct: 525 LVDAGVPARDIAVVSPYNLQVDLLRQSLVHR-HPELEIKSVDGFQGREKEAVILSFVRSN 583
Query: 1204 QEGKVGFLQISNRICVALSRAKK 1226
++G+VGFL RI VA++RA++
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARR 606
Score = 49.7 bits (117), Expect = 3e-05
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 598 LDDSQMEALQFALT-RELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVC 656
LD SQ EA+ FAL+ +ELAII GPPGTGKT ++I + Q Q +L
Sbjct: 192 LDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEI---------ILQAVKQGLKVLCCA 242
Query: 657 YTNHALDQFLEGIYNCQKTSIVRVG 681
+N A+D +E + C K I+R+G
Sbjct: 243 PSNIAVDNLVERLALC-KQRILRLG 266
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 79.0 bits (193), Expect = 4e-14
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 995 LQKVEPRIVIVEEAAEVLEAHTIATLSK--ACQHLILIGDHQQLRPSANVYDLAKNFNLE 1052
L+ ++ R ++V+EA E T+ L + + ++L+GDH+QLRP L +N L+
Sbjct: 2349 LKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERL-QNLGLD 2407
Query: 1053 VSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIY-------QDLENHPSVLKYEKIKG 1105
SLFER + L+ Q+RM I + Y Q L PSVL + +
Sbjct: 2408 RSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKE- 2463
Query: 1106 VSSNLFFVEHNFPEQEI----QEGK--SHQNQHEAHFVVELCKYF-LCQEYLPSQITILT 1158
S + F E+ + EG S N E VV + K L + P I +LT
Sbjct: 2464 -SCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLT 2522
Query: 1159 TYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGK----------- 1207
Y Q + K + + AGV V + K QG E +L+S VR+ +
Sbjct: 2523 PYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLK 2582
Query: 1208 --VGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGP--MLRLC 1263
+GF+ N++ VA++RA++G+ IG+ +L PLW ++ + P +R+C
Sbjct: 2583 KFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVC 2642
Score = 44.7 bits (104), Expect = 9e-04
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 597 KLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIV 633
KL+ SQ A++ AL + +IQGPPGTGKT VGL IV
Sbjct: 2152 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIV 2188
Score = 34.3 bits (77), Expect = 1.2
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 1003 VIVEEAAEVLEAHTIATLSKACQ--HLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1059
++++EAA++LE + L+ A L+L GDH Q+ P ++ +A+ E +L RL
Sbjct: 664 ILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTP--RLFSVARARAAEHTLLHRL 720
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 79.0 bits (193), Expect = 4e-14
Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 995 LQKVEPRIVIVEEAAEVLEAHTIATLSK--ACQHLILIGDHQQLRPSANVYDLAKNFNLE 1052
L+ ++ R ++V+EA E T+ L + + ++L+GDH+QLRP L +N L+
Sbjct: 1780 LKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNERL-QNLGLD 1838
Query: 1053 VSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIY-------QDLENHPSVLKYEKIKG 1105
SLFER + L+ Q+RM I + Y Q L PSVL + +
Sbjct: 1839 RSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKE- 1894
Query: 1106 VSSNLFFVEHNFPEQEI----QEGK--SHQNQHEAHFVVELCKYF-LCQEYLPSQITILT 1158
S + F E+ + EG S N E VV + K L + P I +LT
Sbjct: 1895 -SCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLT 1953
Query: 1159 TYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGK----------- 1207
Y Q + K + + AGV V + K QG E +L+S VR+ +
Sbjct: 1954 PYNAQASEISKALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLK 2013
Query: 1208 --VGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGP--MLRLC 1263
+GF+ N++ VA++RA++G+ IG+ +L PLW ++ + P +R+C
Sbjct: 2014 KFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEAQQTLVPAGQVRVC 2073
Score = 44.7 bits (104), Expect = 9e-04
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 597 KLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIV 633
KL+ SQ A++ AL + +IQGPPGTGKT VGL IV
Sbjct: 1583 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIV 1619
Score = 34.3 bits (77), Expect = 1.2
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 1003 VIVEEAAEVLEAHTIATLSKACQ--HLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1059
++++EAA++LE + L+ A L+L GDH Q+ P ++ +A+ E +L RL
Sbjct: 95 ILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTP--RLFSVARARAAEHTLLHRL 151
>gi|22212927 nuclear transcription factor, X-box binding 1 isoform 3
[Homo sapiens]
Length = 833
Score = 78.6 bits (192), Expect = 6e-14
Identities = 86/350 (24%), Positives = 116/350 (33%), Gaps = 97/350 (27%)
Query: 1298 CGHVCTRACHPYD-----------------------SSHKEFQCMKPCQKVICQEGHRCP 1334
C H C CHP C PC+ ++ H+C
Sbjct: 453 CPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCA 512
Query: 1335 LVCF-QECQPCQVKVPKTIPRCG---HEQMVPCSVPES----DFCCQEPCSKSLRCG-HR 1385
+C +CQPCQ+ + + CG + + V +S DF C + C K L+CG H
Sbjct: 513 ELCHGGQCQPCQI-ILNQVCYCGSTSRDVLCGTDVGKSDGFGDFSCLKICGKDLKCGNHT 571
Query: 1386 CSHPCGEDCVQLCSEMVTIK--LKCGH---SQPVKCGHVEGLLYGGLLVKCTTKCGTILD 1440
CS C Q C + + CG SQ ++ G + C CG L
Sbjct: 572 CSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPLP 631
Query: 1441 CG-----HPCPGSCHSCFEGRFHERCQQPCKRLLICSHKC-----QEPCIG-ECPPCQRT 1489
CG H C CH G PC R + S +C + PC +
Sbjct: 632 CGSLDFIHTCEKLCHEGDCG--------PCSRTSVISCRCSFRTKELPCTSLKSEDATFM 683
Query: 1490 CQNRCVHSQC--KKKCGELC--------------------SPCVEPC-------VWRCQH 1520
C RC + + KC E+C C EPC W+
Sbjct: 684 CDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASF 743
Query: 1521 YQCTKLCSE-------PC-NRPP-CYVPCTKLLVCGHPCIGLC--GEPCP 1559
+ T C PC RPP C C ++ C HP C E CP
Sbjct: 744 DELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHPVYHSCHSEEKCP 793
Score = 62.0 bits (149), Expect = 5e-09
Identities = 61/248 (24%), Positives = 88/248 (35%), Gaps = 52/248 (20%)
Query: 1258 PMLRLCCQ-NHPETHTLVSKASDFQKV---PEGGCSLPCEFRLGCG-----HVCTRACHP 1308
P L CC L+ S +K P C C L CG H C + CH
Sbjct: 588 PQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPLPCGSLDFIHTCEKLCHE 647
Query: 1309 YD------SSHKEFQCMKPCQKVICQ--EGHRCPLVCFQECQPCQVKVPKTIPRCGHEQM 1360
D +S +C +++ C + +C + C ++ CG +
Sbjct: 648 GDCGPCSRTSVISCRCSFRTKELPCTSLKSEDATFMCDKRCNKKRL--------CGRHKC 699
Query: 1361 VPCSVPESDFCCQEPCSKSLRCG-HRCSHPCGEDCVQLC--SEMVTIKLKCGHS---QPV 1414
+ + C C + LRCG HRC PC Q C + + CG S PV
Sbjct: 700 NEICCVDKEHKCPLICGRKLRCGLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPV 759
Query: 1415 KCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHK 1474
CG +CT C + +C HP SCHS E+C C+
Sbjct: 760 PCGTRPP--------ECTQTCARVHECDHPVYHSCHS------EEKCPP-------CTFL 798
Query: 1475 CQEPCIGE 1482
Q+ C+G+
Sbjct: 799 TQKWCMGK 806
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 71.2 bits (173), Expect = 9e-12
Identities = 78/335 (23%), Positives = 103/335 (30%), Gaps = 77/335 (22%)
Query: 1263 CCQNHPETHTLVSKASDFQKVPEGGCSLPCE---FRLGCGHVCTRACHPYDSSHKEFQCM 1319
CC P + + S +V C + CE + GC CT +C S
Sbjct: 46 CCAPAPCLSLVCTPVS---RVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCAS 102
Query: 1320 KPCQ---------KVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPE--- 1367
PCQ K +C + C VC + CQ ++ C VP
Sbjct: 103 SPCQQACCVPVCCKTVCCKPVCCVSVCCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCK 162
Query: 1368 ------SDFCCQE---------PCSKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQ 1412
S CCQ+ PC +++ C C C C + + + C S
Sbjct: 163 PVCSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSS 222
Query: 1413 PVKCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICS 1472
P + C C + C C SC + CQ C C
Sbjct: 223 PCQ------------QACCVPVCCVPVCCVPTCSEDSSSCCQ---QSSCQPACCTSSPCQ 267
Query: 1473 HKCQEP-CIGECPPC--QRTCQNRC---------------VHSQCKK-------KCGELC 1507
H C P C G C Q +CQ C H CK CG
Sbjct: 268 HACCVPVCSGASTSCCQQSSCQPACCTASCCRPSSSVSLLCHPVCKSTCCVPVPSCGASA 327
Query: 1508 SPCVEPCVWRCQHYQCTK-LCSEPCNRPPCYVPCT 1541
S C C C+ C LC C+RP CY C+
Sbjct: 328 SSCQPSC---CRTASCVSLLCRPMCSRPACYSLCS 359
Score = 69.7 bits (169), Expect = 3e-11
Identities = 71/266 (26%), Positives = 91/266 (34%), Gaps = 55/266 (20%)
Query: 1321 PCQKVICQEGHR-----CPLVCFQECQPCQVKVPKTI-PRCGHE---QMVPC-SVPESDF 1370
PC ++C R CP+ C E PCQ + P C + Q+ C S P
Sbjct: 51 PCLSLVCTPVSRVSSPCCPVTC--EPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQA 108
Query: 1371 CCQEPCSKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVK 1430
CC C K++ C C CV +C CG S +
Sbjct: 109 CCVPVCCKTVCCKPVC-------CVSVC---------CGDSSCCQQS------------S 140
Query: 1431 CTTKCGTILDCGHPC--PGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQR 1488
C + C T C C P C G CQQ + S CQ C E PCQ
Sbjct: 141 CQSACCTSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSCVSSPCCQAVC--EPSPCQS 198
Query: 1489 TCQNRCVHSQCKKK-CGELC---SPCVEPCVWR--CQHYQCTKLCSEP----CNRPPCYV 1538
C + C S C++ C C SPC + C C C CSE C + C
Sbjct: 199 GCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCVPVCCVPTCSEDSSSCCQQSSCQP 258
Query: 1539 PCTKLLVCGHP-CIGLCGEPCPKKCR 1563
C C H C+ +C C+
Sbjct: 259 ACCTSSPCQHACCVPVCSGASTSCCQ 284
Score = 46.6 bits (109), Expect = 2e-04
Identities = 40/166 (24%), Positives = 56/166 (33%), Gaps = 52/166 (31%)
Query: 1446 PGSCHSCFEGRFHERCQQPCKR----------LLICS--HKCQEPCIGECP------PCQ 1487
PGSC SC + + C + C L+C+ + PC CP PCQ
Sbjct: 22 PGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRVSSPC---CPVTCEPSPCQ 78
Query: 1488 RTCQNRCVHSQCKKKCGELC----SPCVEPCVWRCQHYQCTKLCSEP------------- 1530
C + C S C++ +L SPC + C C C +C +P
Sbjct: 79 SGCTSSCTPSCCQQSSCQLACCASSPCQQAC---CVPVCCKTVCCKPVCCVSVCCGDSSC 135
Query: 1531 ----------CNRPPCYVPCTKLLVCGHPCIGLCGEPCPK-KCRIC 1565
C PC C + C C G+ C + C C
Sbjct: 136 CQQSSCQSACCTSSPCQQACCVPVCCKPVCSGISSSCCQQSSCVSC 181
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 68.2 bits (165), Expect = 8e-11
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 1003 VIVEEAAEVLEAHTIATL---SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERL 1059
V V+EA + E + L S ++L GD QL P LA + L VS ERL
Sbjct: 883 VFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSR-LAMAYGLNVSFLERL 941
Query: 1060 VKVNIPFVRLNYQHRMCPEIARLLTPHIYQDLENHP------------------------ 1095
+ + R C LL + ++ +H
Sbjct: 942 MS-RPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVV 1000
Query: 1096 -SVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQ--NQHEAHFVVELC---KYFLCQEY 1149
S+L +EK+ L F H E +EGKS N EA V+ C + + +
Sbjct: 1001 TSLLGWEKLPKKGFPLIF--HGVRGSEAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQV 1058
Query: 1150 LPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEG--- 1206
S I ++T Y Q+ +R L+ ++V V+++QG+E +I++S VRSN++
Sbjct: 1059 SASDIGVITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFED 1118
Query: 1207 ---KVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKII 1247
+GFL S R VA++R K + +GN +L + P + ++
Sbjct: 1119 DRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALL 1162
>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
Length = 370
Score = 68.2 bits (165), Expect = 8e-11
Identities = 63/242 (26%), Positives = 81/242 (33%), Gaps = 35/242 (14%)
Query: 1333 CPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGE 1392
CP C + PC P C P S S CC+ C S C C
Sbjct: 37 CPESCCEP--PCCAPAP-----CLSLVCTPVSYVSSP-CCRVTCEPS-----PCQSGCTS 83
Query: 1393 DCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSC 1452
C C + + +L C S P + + V C T C + C C G C
Sbjct: 84 SCTPSCCQQSSCQLACCASSPCQQACC-------VPVCCKTVCCKPVYCVPVCSGDSSCC 136
Query: 1453 FEGRFHERC--QQPCKRLLICSHKCQEPCIG-ECPPCQRTCQNRCVHSQCKKKCGELC-- 1507
+ C PC++ C+ C G CQ++ CV S C C +C
Sbjct: 137 QQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQSSCVSCVSSPC---CQAVCEP 193
Query: 1508 SPCVEPCVWR-----CQHYQCTKLC--SEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK 1560
SPC C+ CQ C C S PC + C C K + C C G C
Sbjct: 194 SPCQSGCISSCTPSCCQQSSCKPACCTSSPCQQACCVPVCCKPVCCVPTCSDDSGSCCQP 253
Query: 1561 KC 1562
C
Sbjct: 254 AC 255
Score = 61.2 bits (147), Expect = 9e-09
Identities = 73/308 (23%), Positives = 96/308 (31%), Gaps = 55/308 (17%)
Query: 1288 CSLPCE---FRLGCGHVCTRACHPYDSSHKEFQCMKPCQ---------KVICQEGHRCPL 1335
C + CE + GC CT +C S PCQ K +C + C
Sbjct: 68 CRVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKPVYCVP 127
Query: 1336 VCFQECQPCQVKVPK----TIPRCGHEQMVP-CSVPE----SDFCCQE---------PCS 1377
VC + CQ + T C VP C P S CCQ+ PC
Sbjct: 128 VCSGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQSSCVSCVSSPCC 187
Query: 1378 KSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGT 1437
+++ C C C C + + K C S P C + V C C
Sbjct: 188 QAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSP--CQQACCVPVCCKPVCCVPTCSD 245
Query: 1438 ILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHS 1497
D G C +C C + + C P + C C C+ C +C C S
Sbjct: 246 --DSGSCCQPAC--CTSSQSQQGCCVP----VCCKPVC---CVPVCSGASTSC---CQQS 291
Query: 1498 QCKKKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEP 1557
C+ C C C C+ L P RP C VP C C P
Sbjct: 292 SCQPAC------CTTSC---CRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQASCCRP 342
Query: 1558 CPKKCRIC 1565
+C
Sbjct: 343 ASCVSLLC 350
Score = 45.8 bits (107), Expect = 4e-04
Identities = 38/172 (22%), Positives = 52/172 (30%), Gaps = 64/172 (37%)
Query: 1446 PGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECP--------------------- 1484
PGSC SC + + C + C C+ PC P
Sbjct: 22 PGSCDSCSDSWQVDDCPESC---------CEPPCCAPAPCLSLVCTPVSYVSSPCCRVTC 72
Query: 1485 ---PCQRTCQNRCVHSQCKKKCGELC----SPCVEPCVWRCQHYQCTKLCSEP------- 1530
PCQ C + C S C++ +L SPC + C C C +C +P
Sbjct: 73 EPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQAC---CVPVCCKTVCCKPVYCVPVC 129
Query: 1531 ----------------CNRPPCYVPCTKLLVCGHPCIGLCGEPCPK-KCRIC 1565
C PC C + C C G+ C + C C
Sbjct: 130 SGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQSSCVSC 181
Score = 34.3 bits (77), Expect = 1.2
Identities = 33/121 (27%), Positives = 42/121 (34%), Gaps = 23/121 (19%)
Query: 1287 GCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMKP--CQKVICQEGHRCPLVCFQECQP- 1343
GC +P + C C C +S + +P C C+ L+C C+P
Sbjct: 264 GCCVPVCCKPVC---CVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPA 320
Query: 1344 CQVKVPKTIPRCGHEQMVPCSVPESDF---CCQEPCSKSLRCGHRCSHP--CGEDCVQLC 1398
C V VP C P S CC+ SL C CS P CG Q
Sbjct: 321 CCVPVPS------------CCAPTSSCQASCCRPASCVSLLCRPACSRPACCGPTSTQKS 368
Query: 1399 S 1399
S
Sbjct: 369 S 369
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 66.2 bits (160), Expect = 3e-10
Identities = 74/295 (25%), Positives = 96/295 (32%), Gaps = 70/295 (23%)
Query: 1263 CCQNHPETHTLVSKASDFQKVPEGGCSLPCE---FRLGCGHVCTRACHPYDSSHKEFQCM 1319
CC P + + S +V C + CE + GC CT +C S
Sbjct: 46 CCAPAPCLSLVCTPVS---RVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCAS 102
Query: 1320 KPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKS 1379
PCQ+ C P+ C C C+ P C VP +S C Q C +
Sbjct: 103 SPCQQACC-----VPVCCKTVC--CK-------PVC----CVPVCCGDSSCCQQSSCQSA 144
Query: 1380 LRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTK--CGT 1437
C C CV +C + V + Q C V C + C
Sbjct: 145 CCTSSPCQQAC---CVPICCKPVCSGISSSCCQQSSC------------VSCVSSPCCQA 189
Query: 1438 ILDCGHPCPGSCHS-CFEGRFHERCQQ-PCKRLLICSHKCQEPCIGECPP--CQRTCQNR 1493
+ + P C S C CQQ C+ S CQ+ C C P C+ C
Sbjct: 190 VCE-----PSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQAC---CVPVCCKTVC--- 238
Query: 1494 CVHSQCKKKCGELCSPCVEPCVWRCQHYQCTKLC--SEPCNRPPCYVPCTKLLVC 1546
CK C E S C CQ C C S PC + C C K + C
Sbjct: 239 -----CKPVCSEDSSSC-------CQQSSCQPACCTSSPCQQACCVPVCCKPVCC 281
Score = 50.8 bits (120), Expect = 1e-05
Identities = 38/144 (26%), Positives = 50/144 (34%), Gaps = 32/144 (22%)
Query: 1446 PGSCHSCFEGRFHERCQQPCKRLLICSHKC--QEPCIGE------------CP------P 1485
PGSC SC + + C + C C+ C PC+ CP P
Sbjct: 17 PGSCDSCSDSWQVDDCPESCCEPPCCAPSCCAPAPCLSLVCTPVSRVSSPCCPVTCEPSP 76
Query: 1486 CQRTCQNRCVHSQCKKKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVP------ 1539
CQ C + C S C++ +L PC C C C C +P C VP
Sbjct: 77 CQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC---CKTVCCKPVCCVPVCCGDS 133
Query: 1540 -CTKLLVCGHPCIGLCGEPCPKKC 1562
C + C C PC + C
Sbjct: 134 SCCQQSSCQSAC--CTSSPCQQAC 155
Score = 32.7 bits (73), Expect = 3.5
Identities = 29/134 (21%), Positives = 38/134 (28%), Gaps = 16/134 (11%)
Query: 1288 CSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQE--CQPCQ 1345
C C + C VC C P S C + + C C C C+P
Sbjct: 224 CQQACCVPVCCKTVC---CKPVCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVC 280
Query: 1346 VKVPKTIPRCGHEQMVPC-----------SVPESDFCCQEPCSKSLRCGHRCSHPCGEDC 1394
K ++P C + C S CC C K + C CS C
Sbjct: 281 CKPVGSVPICSGASSLCCQQSSCQPACCTSSQSQQGCCVPVCCKPVSCVPVCSGASSSCC 340
Query: 1395 VQLCSEMVTIKLKC 1408
Q + C
Sbjct: 341 QQSSCQPACCTTSC 354
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 63.2 bits (152), Expect = 2e-09
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 51/301 (16%)
Query: 1003 VIVEEAAEVLEAHTIATLSKACQ---------HLILIGDHQQLRPSANVYDLAKNFNLEV 1053
+ ++EA +E ++ ++ + L+L GD +QL P L + L
Sbjct: 642 IFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRS-PLTQKHGLGY 700
Query: 1054 SLFERLVKVNIPF------------VRLNYQHRMCPEIARLLTPHIYQ-DLENHPSVLKY 1100
SL ERL+ N + +L +R P I + Y+ +L+ V+
Sbjct: 701 SLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR 760
Query: 1101 EKI---KGVSSNLF-FVEHNFPEQEIQEGKSHQ--NQHEAHFVVELCKYFLCQE------ 1148
E+ G+ F + H ++ +EG S N EA V K L
Sbjct: 761 ERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKA 820
Query: 1149 -YLPSQITILTTYTGQL----FCL----RKLMPAKTFAGVRVHVVDKYQGEENDIILLSL 1199
P + +++ Y Q+ +C+ R+L ++V V+++QG+E +IL+S
Sbjct: 821 RLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILIST 880
Query: 1200 VRSNQ-------EGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRE 1252
VRS+Q + +GFL+ R VA++RAK + +GN +L P W + +E
Sbjct: 881 VRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
Query: 1253 N 1253
N
Sbjct: 941 N 941
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 63.2 bits (152), Expect = 2e-09
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 51/301 (16%)
Query: 1003 VIVEEAAEVLEAHTIATLSKACQ---------HLILIGDHQQLRPSANVYDLAKNFNLEV 1053
+ ++EA +E ++ ++ + L+L GD +QL P L + L
Sbjct: 642 IFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRS-PLTQKHGLGY 700
Query: 1054 SLFERLVKVNIPF------------VRLNYQHRMCPEIARLLTPHIYQ-DLENHPSVLKY 1100
SL ERL+ N + +L +R P I + Y+ +L+ V+
Sbjct: 701 SLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQACADVVDR 760
Query: 1101 EKI---KGVSSNLF-FVEHNFPEQEIQEGKSHQ--NQHEAHFVVELCKYFLCQE------ 1148
E+ G+ F + H ++ +EG S N EA V K L
Sbjct: 761 ERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSKKGKA 820
Query: 1149 -YLPSQITILTTYTGQL----FCL----RKLMPAKTFAGVRVHVVDKYQGEENDIILLSL 1199
P + +++ Y Q+ +C+ R+L ++V V+++QG+E +IL+S
Sbjct: 821 RLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILIST 880
Query: 1200 VRSNQ-------EGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRE 1252
VRS+Q + +GFL+ R VA++RAK + +GN +L P W + +E
Sbjct: 881 VRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
Query: 1253 N 1253
N
Sbjct: 941 N 941
>gi|154759251 keratin associated protein 10-9 [Homo sapiens]
Length = 292
Score = 63.2 bits (152), Expect = 2e-09
Identities = 65/283 (22%), Positives = 91/283 (32%), Gaps = 44/283 (15%)
Query: 1263 CCQNHPETHTLVSKASDFQKVPEGGCSLPCE---FRLGCGHVCTRACHPYDSSHKEFQCM 1319
CC P L + +V C + CE + GC CT +C S +
Sbjct: 36 CCAPAP---CLTLVCTPVSRVSSPCCQVTCEPSPCQSGCTSSCTPSCCQQSSCQPAYCTS 92
Query: 1320 KPCQKVICQEGHRCPLVCFQEC---QPCQVKVPKTIPRCGHEQMVP-CSVPESDFCCQEP 1375
PCQ+ C P+ C C C + C P C VP CC+
Sbjct: 93 SPCQQACCVPVCCKPVCCVPVCCGASSCCQQSSYQPACCASSSCQPACCVP---VCCKPV 149
Query: 1376 CSKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKC 1435
C C+ C ED C + + + C S P + + + V C C
Sbjct: 150 C---------CAPTCSEDSYSCCQQS-SCQPACCTSSPCQQSYC-------VPVCCKPVC 192
Query: 1436 GTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCV 1495
+ C C G+ C CQQ + C+ C P C+ C+ C
Sbjct: 193 CKPICCVPVCSGASSLC--------CQQSGCQPACCTTSCCRPSSSVSLLCRPVCRPACC 244
Query: 1496 HSQCKKKCGELCSPCVEPCVWRCQHYQCTK-LCSEPCNRPPCY 1537
C+P C+ C LC C+RP CY
Sbjct: 245 -----VPVSSCCAPTSSRQPSYCRQASCVSLLCRPVCSRPACY 282
Score = 54.3 bits (129), Expect = 1e-06
Identities = 58/216 (26%), Positives = 72/216 (33%), Gaps = 45/216 (20%)
Query: 1366 PESDFCCQEPCSKSLRCGHRCSHPCGEDCVQL-CSEMVTIKLKCGH--SQPVKCGHVEGL 1422
PES CC+ PC C C P C+ L C+ + + C +P C
Sbjct: 23 PES--CCEPPC-----CATSCCAPA--PCLTLVCTPVSRVSSPCCQVTCEPSPC------ 67
Query: 1423 LYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEP-CIG 1481
G CT C C P C S CQQ C + C C P C G
Sbjct: 68 -QSGCTSSCTPSCCQQSSCQ---PAYCTS-------SPCQQACCVPVCCKPVCCVPVCCG 116
Query: 1482 ECPPCQRTCQNR--CVHSQCKKKC-------GELCSP-CVEPCVWRCQHYQCTKLC--SE 1529
CQ++ C S C+ C C+P C E CQ C C S
Sbjct: 117 ASSCCQQSSYQPACCASSSCQPACCVPVCCKPVCCAPTCSEDSYSCCQQSSCQPACCTSS 176
Query: 1530 PCNRPPCYVPCTKLLVCGHPCIGLCGEPCPKKCRIC 1565
PC + C C K + C C C C +C
Sbjct: 177 PCQQSYCVPVCCKPVCCKPIC---CVPVCSGASSLC 209
Score = 46.6 bits (109), Expect = 2e-04
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 25/114 (21%)
Query: 1445 CPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIG-ECPPCQRT----CQNRCVHSQC 1499
CP SC C+ PC C+ PC+ C P R CQ C S C
Sbjct: 22 CPESC-----------CEPPCCATSCCA---PAPCLTLVCTPVSRVSSPCCQVTCEPSPC 67
Query: 1500 KKKCGELCSP-CVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIG 1552
+ C C+P C + CQ CT S PC + C C K + C C G
Sbjct: 68 QSGCTSSCTPSCCQQS--SCQPAYCT---SSPCQQACCVPVCCKPVCCVPVCCG 116
>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 62.0 bits (149), Expect = 5e-09
Identities = 66/250 (26%), Positives = 80/250 (32%), Gaps = 78/250 (31%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVP-CSVPESDFCCQEPC 1376
C PC + C C C++ P V + P C VP C P CC C
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWK---PTTVTTCSSTPCCQPSCCVPSCCQP----CCHPTC 56
Query: 1377 SKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCG 1436
++ C C P CV C QP C C+T C
Sbjct: 57 CQNTCCRTTCCQPT---CVASCC------------QP-SC--------------CSTPCC 86
Query: 1437 TILDCGHPCPG--SCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRT----- 1489
CG C G SC S C QP IC C +PC P C +T
Sbjct: 87 QPTCCGSSCCGQTSCGSS--------CCQP-----ICGSSCCQPCCH--PTCYQTTCFRT 131
Query: 1490 --CQNRCVHSQCKKKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCG 1547
CQ C H C + C PC P + Y+ T C RP C C
Sbjct: 132 TCCQPTCCHQTCNES--SYCLPCCRPTCCQTTCYRTT------CCRPSC--------CCS 175
Query: 1548 HPCIGLCGEP 1557
C+ C +P
Sbjct: 176 PCCVSSCCQP 185
Score = 50.4 bits (119), Expect = 2e-05
Identities = 44/149 (29%), Positives = 54/149 (36%), Gaps = 40/149 (26%)
Query: 1441 CGHPC--PGSCHS------CFEGRFHERCQQ-PCKRLLICSHKCQEPCIGECPP--CQRT 1489
C PC P C + C++ C PC + C C +PC C P CQ T
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPC---CHPTCCQNT 60
Query: 1490 C------QNRCVHSQCKKKCGELCS-PCVEP------------CVWRCQHYQCTKLCSEP 1530
C Q CV S C+ C CS PC +P C C C C +P
Sbjct: 61 CCRTTCCQPTCVASCCQPSC---CSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQP 117
Query: 1531 CNRPPCY-VPCTKLLVCGHPCIGLCGEPC 1558
C P CY C + C C C + C
Sbjct: 118 CCHPTCYQTTCFRTTCCQPTC---CHQTC 143
Score = 50.4 bits (119), Expect = 2e-05
Identities = 49/190 (25%), Positives = 55/190 (28%), Gaps = 53/190 (27%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCS 1377
C +PC C + C C CQP V C PC P CC C
Sbjct: 47 CCQPCCHPTCCQNTCCRTTC---CQPTCVASCCQPSCCS----TPCCQPT---CCGSSCC 96
Query: 1378 KSLRCGHRCSHP-CGEDCVQLCSEMVTIKLKCGHS---QPVKCGHVEGLLYGGLLVKCTT 1433
CG C P CG C Q C + C + QP C
Sbjct: 97 GQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQT-------------- 142
Query: 1434 KCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNR 1493
C C C +C CQ C R C C C C PC
Sbjct: 143 -CNESSYCLPCCRPTC-----------CQTTCYRTTCCRPSC---C---CSPC------- 177
Query: 1494 CVHSQCKKKC 1503
CV S C+ C
Sbjct: 178 CVSSCCQPSC 187
>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 62.0 bits (149), Expect = 5e-09
Identities = 66/250 (26%), Positives = 80/250 (32%), Gaps = 78/250 (31%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVP-CSVPESDFCCQEPC 1376
C PC + C C C++ P V + P C VP C P CC C
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWK---PTTVTTCSSTPCCQPSCCVPSCCQP----CCHPTC 56
Query: 1377 SKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCG 1436
++ C C P CV C QP C C+T C
Sbjct: 57 CQNTCCRTTCCQPT---CVASCC------------QP-SC--------------CSTPCC 86
Query: 1437 TILDCGHPCPG--SCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRT----- 1489
CG C G SC S C QP IC C +PC P C +T
Sbjct: 87 QPTCCGSSCCGQTSCGSS--------CCQP-----ICGSSCCQPCCH--PTCYQTTCFRT 131
Query: 1490 --CQNRCVHSQCKKKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCG 1547
CQ C H C + C PC P + Y+ T C RP C C
Sbjct: 132 TCCQPTCCHQTCNES--SYCLPCCRPTCCQTTCYRTT------CCRPSC--------CCS 175
Query: 1548 HPCIGLCGEP 1557
C+ C +P
Sbjct: 176 PCCVSSCCQP 185
Score = 50.4 bits (119), Expect = 2e-05
Identities = 44/149 (29%), Positives = 54/149 (36%), Gaps = 40/149 (26%)
Query: 1441 CGHPC--PGSCHS------CFEGRFHERCQQ-PCKRLLICSHKCQEPCIGECPP--CQRT 1489
C PC P C + C++ C PC + C C +PC C P CQ T
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPC---CHPTCCQNT 60
Query: 1490 C------QNRCVHSQCKKKCGELCS-PCVEP------------CVWRCQHYQCTKLCSEP 1530
C Q CV S C+ C CS PC +P C C C C +P
Sbjct: 61 CCRTTCCQPTCVASCCQPSC---CSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQP 117
Query: 1531 CNRPPCY-VPCTKLLVCGHPCIGLCGEPC 1558
C P CY C + C C C + C
Sbjct: 118 CCHPTCYQTTCFRTTCCQPTC---CHQTC 143
Score = 50.4 bits (119), Expect = 2e-05
Identities = 49/190 (25%), Positives = 55/190 (28%), Gaps = 53/190 (27%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCS 1377
C +PC C + C C CQP V C PC P CC C
Sbjct: 47 CCQPCCHPTCCQNTCCRTTC---CQPTCVASCCQPSCCS----TPCCQPT---CCGSSCC 96
Query: 1378 KSLRCGHRCSHP-CGEDCVQLCSEMVTIKLKCGHS---QPVKCGHVEGLLYGGLLVKCTT 1433
CG C P CG C Q C + C + QP C
Sbjct: 97 GQTSCGSSCCQPICGSSCCQPCCHPTCYQTTCFRTTCCQPTCCHQT-------------- 142
Query: 1434 KCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNR 1493
C C C +C CQ C R C C C C PC
Sbjct: 143 -CNESSYCLPCCRPTC-----------CQTTCYRTTCCRPSC---C---CSPC------- 177
Query: 1494 CVHSQCKKKC 1503
CV S C+ C
Sbjct: 178 CVSSCCQPSC 187
>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 62.0 bits (149), Expect = 5e-09
Identities = 66/250 (26%), Positives = 80/250 (32%), Gaps = 78/250 (31%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVP-CSVPESDFCCQEPC 1376
C PC + C C C++ P V + P C VP C P CC C
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWK---PTTVTTCSSTPCCQPSCCVPSCCQP----CCHPTC 56
Query: 1377 SKSLRCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCG 1436
++ C C P CV C QP C C+T C
Sbjct: 57 CQNTCCRTTCCQPT---CVASCC------------QP-SC--------------CSTPCC 86
Query: 1437 TILDCGHPCPG--SCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRT----- 1489
CG C G SC S C QP IC C +PC P C +T
Sbjct: 87 QPTCCGSSCCGQTSCGSS--------CCQP-----ICGSSCCQPCCH--PTCYQTICFRT 131
Query: 1490 --CQNRCVHSQCKKKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCG 1547
CQ C H C + C PC P + Y+ T C RP C C
Sbjct: 132 TCCQPTCCHQTCNES--SYCLPCCRPTCCQTTCYRTT------CCRPSC--------CCS 175
Query: 1548 HPCIGLCGEP 1557
C+ C +P
Sbjct: 176 PCCVSSCCQP 185
Score = 50.1 bits (118), Expect = 2e-05
Identities = 47/157 (29%), Positives = 55/157 (35%), Gaps = 40/157 (25%)
Query: 1441 CGHPC--PGSCHS------CFEGRFHERCQQ-PCKRLLICSHKCQEPCIGECPP--CQRT 1489
C PC P C + C++ C PC + C C +PC C P CQ T
Sbjct: 4 CCSPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPC---CHPTCCQNT 60
Query: 1490 C------QNRCVHSQCKKKCGELCS-PCVEP------------CVWRCQHYQCTKLCSEP 1530
C Q CV S C+ C CS PC +P C C C C +P
Sbjct: 61 CCRTTCCQPTCVASCCQPSC---CSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQP 117
Query: 1531 CNRPPCYVPCTKLLVCGHP--CIGLCGEP--CPKKCR 1563
C P CY C P C C E C CR
Sbjct: 118 CCHPTCYQTICFRTTCCQPTCCHQTCNESSYCLPCCR 154
Score = 49.7 bits (117), Expect = 3e-05
Identities = 49/190 (25%), Positives = 55/190 (28%), Gaps = 53/190 (27%)
Query: 1318 CMKPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCS 1377
C +PC C + C C CQP V C PC P CC C
Sbjct: 47 CCQPCCHPTCCQNTCCRTTC---CQPTCVASCCQPSCCS----TPCCQPT---CCGSSCC 96
Query: 1378 KSLRCGHRCSHP-CGEDCVQLCSEMVTIKLKCGHS---QPVKCGHVEGLLYGGLLVKCTT 1433
CG C P CG C Q C + C + QP C
Sbjct: 97 GQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCHQT-------------- 142
Query: 1434 KCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNR 1493
C C C +C CQ C R C C C C PC
Sbjct: 143 -CNESSYCLPCCRPTC-----------CQTTCYRTTCCRPSC---C---CSPC------- 177
Query: 1494 CVHSQCKKKC 1503
CV S C+ C
Sbjct: 178 CVSSCCQPSC 187
>gi|33598931 scavenger receptor class F, member 1 isoform 3 precursor
[Homo sapiens]
Length = 569
Score = 61.6 bits (148), Expect = 7e-09
Identities = 87/347 (25%), Positives = 110/347 (31%), Gaps = 79/347 (22%)
Query: 1257 GPMLRLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCG-----HVCTRACHPYDS 1311
GP R C HP H A+ + CEF CG T CH +
Sbjct: 96 GPDCRESCPCHP--HGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCH-CEP 152
Query: 1312 SHKEFQCMKPCQ-------------KVICQEG---HRCPLVCFQECQPCQVKVPKTIPRC 1355
C +PCQ +C+ G RC C PC+ + R
Sbjct: 153 GWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRP 212
Query: 1356 GHEQMVPCSVPESDFCCQEPCSKSLRCGH-RCSHPCGEDCVQLCSEMVTIKLKC-GHSQP 1413
G PE CQ+ C C RCS GE +L C S
Sbjct: 213 GWWG------PE----CQQQCE----CVRGRCSAASGECTCPPGFRGARCELPCPAGSHG 258
Query: 1414 VKCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPC-------- 1465
V+C H G +C C P GSC SC G +CQQPC
Sbjct: 259 VQCAHSCG------------RCKHNEPCS-PDTGSCESCEPGWNGTQCQQPCLPGTFGES 305
Query: 1466 --KRLLICSH-KCQEPCIGECPPCQ-----RTCQNRCVHSQCKKKCGELCSPCVE----- 1512
++ C H + EP G C C C++ C + CG C CV+
Sbjct: 306 CEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTCPTCVQGSCDT 365
Query: 1513 ---PCVWRCQHY--QCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLC 1554
CV ++ C C + C VPC HP G C
Sbjct: 366 VTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVSGSC 412
>gi|33598929 scavenger receptor class F, member 1 isoform 1 precursor
[Homo sapiens]
Length = 830
Score = 61.6 bits (148), Expect = 7e-09
Identities = 87/347 (25%), Positives = 110/347 (31%), Gaps = 79/347 (22%)
Query: 1257 GPMLRLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCG-----HVCTRACHPYDS 1311
GP R C HP H A+ + CEF CG T CH +
Sbjct: 96 GPDCRESCPCHP--HGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCH-CEP 152
Query: 1312 SHKEFQCMKPCQ-------------KVICQEG---HRCPLVCFQECQPCQVKVPKTIPRC 1355
C +PCQ +C+ G RC C PC+ + R
Sbjct: 153 GWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRP 212
Query: 1356 GHEQMVPCSVPESDFCCQEPCSKSLRCGH-RCSHPCGEDCVQLCSEMVTIKLKC-GHSQP 1413
G PE CQ+ C C RCS GE +L C S
Sbjct: 213 GWWG------PE----CQQQCE----CVRGRCSAASGECTCPPGFRGARCELPCPAGSHG 258
Query: 1414 VKCGHVEGLLYGGLLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPC-------- 1465
V+C H G +C C P GSC SC G +CQQPC
Sbjct: 259 VQCAHSCG------------RCKHNEPCS-PDTGSCESCEPGWNGTQCQQPCLPGTFGES 305
Query: 1466 --KRLLICSH-KCQEPCIGECPPCQ-----RTCQNRCVHSQCKKKCGELCSPCVE----- 1512
++ C H + EP G C C C++ C + CG C CV+
Sbjct: 306 CEQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTCPTCVQGSCDT 365
Query: 1513 ---PCVWRCQHY--QCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLC 1554
CV ++ C C + C VPC HP G C
Sbjct: 366 VTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVSGSC 412
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 61.2 bits (147), Expect = 9e-09
Identities = 90/348 (25%), Positives = 145/348 (41%), Gaps = 67/348 (19%)
Query: 958 TSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRI---VIVEEAAEVLEA 1014
+SA ++ +ED ILK VV T ++Y L +EP ++++EAA+ +E
Sbjct: 748 SSAHSTFQMPQKED--ILKHRVVV--VTLNTSQYLCQLD-LEPGFFTHILLDEAAQAMEC 802
Query: 1015 HTIATLSKACQH--LILIGDHQQLRPSANVY-DLAKNFNLEVSLFERLVKVNIPFVRLNY 1071
TI L+ A Q+ ++L GDH QL P VY + A+ NL VSL +RL Y
Sbjct: 803 ETIMPLALATQNTRIVLAGDHMQLSPF--VYSEFARERNLHVSLLDRL-----------Y 849
Query: 1072 QHRMCPEIARLLTPHIYQDLE---NHPSVLKYEKIKGVSSNLFFVEHNFP-------EQE 1121
+H R+L Y+ E N+ S L YE S + +P ++
Sbjct: 850 EHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTARGED 909
Query: 1122 IQEGKS--HQNQHEAHFVVELCKYFLCQ------EYLPSQITILTTYTGQLFCLRKLMPA 1173
+QE S N E VVE + + + I ++T Y Q+F +R +
Sbjct: 910 VQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRK 969
Query: 1174 KTFAGVRVHVVDKYQGEENDIILLSLVR---------------------SNQEGKVGFLQ 1212
K + V V V QG++ ++ LS VR S ++ GFL
Sbjct: 970 KRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLS 1029
Query: 1213 ISNRICVALSRAKKGMYCIGNMQMLAKV----PLWSKIIHTLRENNQI 1256
+ A++RA+ + +G+ L + W + I EN+ +
Sbjct: 1030 NYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSL 1077
Score = 33.9 bits (76), Expect = 1.6
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 589 QWPSKEALKLDDSQMEALQFALTRELAI------IQGPPGTGKTYVGLKIVQALLTNESV 642
QW + +L+ Q EA+ A+T LAI I GP GTGKT+ + V+ +L
Sbjct: 633 QWDEQLDPRLNAKQKEAV-LAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ--- 688
Query: 643 WQISLQKFPILVVCYTNHALDQFLE 667
Q+ IL+ ++N A D +++
Sbjct: 689 -----QETRILICTHSNSAADLYIK 708
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 61.2 bits (147), Expect = 9e-09
Identities = 67/287 (23%), Positives = 87/287 (30%), Gaps = 53/287 (18%)
Query: 1263 CCQNHPETHTLVSKASDFQKVPEGGCSLPCE---FRLGCGHVCTRACHPYDSSHKEFQCM 1319
CC P L + +V C CE + GC CT +C S
Sbjct: 36 CCAPAP---CLTLVCTPVSRVSSPCCQAACEPSPCQSGCTSSCTPSCCQQSSCQPACCTS 92
Query: 1320 KPCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPE-SDFCCQEPCSK 1378
PCQ+ C P+ C C +P C + C CC S+
Sbjct: 93 SPCQQACC-----VPVCCKPVC---------CLPTCSKDSSSCCQQSSCQPTCCASSSSQ 138
Query: 1379 SLRCGHRCSHP------CGEDCVQLCSEMVTIKLKCGHS--QPVKCGHVEGLLYGGLLVK 1430
C C P C ED C + C S Q C + V+
Sbjct: 139 QSCCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTSSPCQQACC----------VPVR 188
Query: 1431 CTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTC 1490
C C + C C G+ SC CQQ + C+ C P C+ C
Sbjct: 189 CKPVCCKPICCVPVCSGASTSC--------CQQSSCQPACCTTSCCRPSSSVSLLCRPVC 240
Query: 1491 QNRCVHSQCKKKCGELCSPCVEPCVWRCQHYQCTK-LCSEPCNRPPC 1536
+ C C S C C C+ C LC C+RP C
Sbjct: 241 RPAC--CMPVSSCCAPASSCQASC---CRPASCVSLLCRPACSRPAC 282
Score = 55.1 bits (131), Expect = 7e-07
Identities = 67/285 (23%), Positives = 83/285 (29%), Gaps = 50/285 (17%)
Query: 1288 CSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQECQPCQVK 1347
C+L C C T C P C C+ CQ G C C P +
Sbjct: 32 CALSCCAPAPC---LTLVCTPVSRVSSPC-CQAACEPSPCQSG------CTSSCTPSCCQ 81
Query: 1348 VPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGEDCVQLCSEMVTIKLK 1407
P C S P CC C K + C CS C Q
Sbjct: 82 QSSCQPACC------TSSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQ----------- 124
Query: 1408 CGHSQPVKCGHVEGLLYGGLLVKCTTKC--GTILDCGHPC--PGSCH-SCFEGRFHERCQ 1462
QP C + V C C T + C SCH +C CQ
Sbjct: 125 -SSCQPTCCASSSSQQSCCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTS---SPCQ 180
Query: 1463 QPCKRLLICSHKCQEP--CIGECPPCQRTCQNRCVHSQCKKKCGELCSPCVEPCVWRCQH 1520
Q C + C C +P C+ C +C C S C+ C C C C+
Sbjct: 181 QACCVPVRCKPVCCKPICCVPVCSGASTSC---CQQSSCQPAC------CTTSC---CRP 228
Query: 1521 YQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPKKCRIC 1565
L P RP C +P + C C P +C
Sbjct: 229 SSSVSLLCRPVCRPACCMPVSSCCAPASSCQASCCRPASCVSLLC 273
Score = 45.1 bits (105), Expect = 7e-04
Identities = 33/113 (29%), Positives = 40/113 (35%), Gaps = 27/113 (23%)
Query: 1445 CPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIG-ECPPCQRT----CQNRCVHSQC 1499
CP SC C+ C L C+ PC+ C P R CQ C S C
Sbjct: 22 CPESC-----------CEPHCCALSCCA---PAPCLTLVCTPVSRVSSPCCQAACEPSPC 67
Query: 1500 KKKCGELCSPCVEPCVWRCQHYQCTKLC--SEPCNRPPCYVPCTKLLVCGHPC 1550
+ C C+P CQ C C S PC + C C K + C C
Sbjct: 68 QSGCTSSCTPSC------CQQSSCQPACCTSSPCQQACCVPVCCKPVCCLPTC 114
>gi|153218552 keratin associated protein 9.8 [Homo sapiens]
Length = 159
Score = 60.8 bits (146), Expect = 1e-08
Identities = 47/154 (30%), Positives = 59/154 (38%), Gaps = 38/154 (24%)
Query: 1431 CTTKCG---TILDCGH-PC--PGSCHSCFEGRFHERCQQPCKRLLICSHKCQEP-CIGEC 1483
C T C T+ C PC P C S C QPC R C + C +P C+ C
Sbjct: 14 CRTTCWKPTTVTTCSSTPCCQPSCCVSS--------CCQPCCRPTCCQNTCCQPICVTSC 65
Query: 1484 --------PPCQRTCQNRCVHSQCKKKCGEL--CSP------CVEP---CVWRCQHYQCT 1524
P CQ TC C + C CG+ C+P C P C+ C + C
Sbjct: 66 CQPSCCSTPCCQPTC---CGQTSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPGCLNQSCG 122
Query: 1525 KLCSEPCNRPPCYVPCTKLLVCGHP-CIGLCGEP 1557
C +PC RP C C P C+ C +P
Sbjct: 123 SNCCQPCCRPACCETTCCRTTCFQPTCVSSCCQP 156
Score = 49.7 bits (117), Expect = 3e-05
Identities = 48/192 (25%), Positives = 55/192 (28%), Gaps = 55/192 (28%)
Query: 1331 HRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPC 1390
H C C C P T+ C S P CCQ C C C PC
Sbjct: 3 HCCSPCCQPTCCRTTCWKPTTVTTCS-------STP----CCQPSC-----CVSSCCQPC 46
Query: 1391 GED--CVQLCSEMVTIKLKCGHS-------QPVKCGHVEGLLYGGLLVKCTTKCGTILDC 1441
C C + + + C S QP CG C + CG C
Sbjct: 47 CRPTCCQNTCCQPICVTSCCQPSCCSTPCCQPTCCGQ----------TSCGSSCGQSSSC 96
Query: 1442 G---------HPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTC-Q 1491
HP C C QPC R C C C+ TC Q
Sbjct: 97 APVYCRRTCYHPTTVCLPGCLNQSCGSNCCQPCCRPACCETTC----------CRTTCFQ 146
Query: 1492 NRCVHSQCKKKC 1503
CV S C+ C
Sbjct: 147 PTCVSSCCQPSC 158
Score = 40.8 bits (94), Expect = 0.013
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 23/101 (22%)
Query: 1483 CPPCQRTCQNRCVHSQCKKK-----------CGELC--SPCVEPCV--WRCQHYQCTKLC 1527
C PC CQ C + C K C C S C +PC CQ+ C +C
Sbjct: 5 CSPC---CQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQPIC 61
Query: 1528 SEPCNRPP-CYVPCTKLLVCGH-PCIGLCGEP---CPKKCR 1563
C +P C PC + CG C CG+ P CR
Sbjct: 62 VTSCCQPSCCSTPCCQPTCCGQTSCGSSCGQSSSCAPVYCR 102
>gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3
[Homo sapiens]
Length = 204
Score = 59.3 bits (142), Expect = 3e-08
Identities = 58/233 (24%), Positives = 78/233 (33%), Gaps = 48/233 (20%)
Query: 1322 CQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLR 1381
C + +CQE CP C C P P C C V CC+ C +S+
Sbjct: 15 CGQDLCQETCCCPSCCQTTCCRTTCYRPSYSPTCCRPS---CCVSS---CCKPQCCQSVC 68
Query: 1382 CGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILDC 1441
C C HP C+ C C +P C V C +I C
Sbjct: 69 CQPTCCHP--SCCISSCCRPSCCVSSC--CKPQCCQSV------CCQPNCCRPSCSISSC 118
Query: 1442 GHP--CPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQC 1499
P C SC C+ C + + C C C+ +C + S C
Sbjct: 119 CRPSCCVSSC-----------CKPQCCQSVCCQPNC----------CRPSCS---ISSCC 154
Query: 1500 KKKCGELCSPCVEPCVWRCQHYQCTKL-CSEPCNRPPCYV-PCTKLLVCGHPC 1550
+ C E S C PC C C ++ C C RP C + C + + C C
Sbjct: 155 RPSCCE--SSCCRPCC--CLRPVCGRVSCHTTCYRPTCVISTCPRPVCCASSC 203
>gi|239756798 PREDICTED: similar to keratin associated protein 4-12
isoform 3 [Homo sapiens]
Length = 204
Score = 59.3 bits (142), Expect = 3e-08
Identities = 58/233 (24%), Positives = 78/233 (33%), Gaps = 48/233 (20%)
Query: 1322 CQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLR 1381
C + +CQE CP C C P P C C V CC+ C +S+
Sbjct: 15 CGQDLCQETCCCPSCCQTTCCRTTCYRPSYSPTCCRPS---CCVSS---CCKPQCCQSVC 68
Query: 1382 CGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILDC 1441
C C HP C+ C C +P C V C +I C
Sbjct: 69 CQPTCCHP--SCCISSCCRPSCCVSSC--CKPQCCQSV------CCQPNCCRPSCSISSC 118
Query: 1442 GHP--CPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQC 1499
P C SC C+ C + + C C C+ +C + S C
Sbjct: 119 CRPSCCVSSC-----------CKPQCCQSVCCQPNC----------CRPSCS---ISSCC 154
Query: 1500 KKKCGELCSPCVEPCVWRCQHYQCTKL-CSEPCNRPPCYV-PCTKLLVCGHPC 1550
+ C E S C PC C C ++ C C RP C + C + + C C
Sbjct: 155 RPSCCE--SSCCRPCC--CLRPVCGRVSCHTTCYRPTCVISTCPRPVCCASSC 203
>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
Length = 1044
Score = 59.3 bits (142), Expect = 3e-08
Identities = 88/336 (26%), Positives = 111/336 (33%), Gaps = 88/336 (26%)
Query: 1286 GGCSLP----CEFRLGCGHVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCFQEC 1341
G C P CE G G C+ C DS H C CQ CQ G C +
Sbjct: 110 GRCVSPDTCHCEPGWG-GPDCSSGC---DSDHWGPHCSNRCQ---CQNGALCNPIT---- 158
Query: 1342 QPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGED-------- 1393
C RC E++ C+ CQ PC R G C GE
Sbjct: 159 GACVCAAGFRGWRC--EEL--CAPGTHGKGCQLPCQ--CRHGASCDPRAGECLCAPGYTG 212
Query: 1394 --CVQLC---SEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCG-TILDCGHPCPG 1447
C +LC S +L+C C H+ G +C G T C PCP
Sbjct: 213 VYCEELCPPGSHGAHCELRCPCQNGGTCHHITG--------ECACPPGWTGAVCAQPCP- 263
Query: 1448 SCHSCFEGRFHERCQQPCKRLLICSHKCQ-EPCIGEC--------PPCQRTCQNRCVHSQ 1498
G F + C Q C C H Q + G+C CQ C Q
Sbjct: 264 ------PGTFGQNCSQDCP----CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQ 313
Query: 1499 CKKKC----GELCSPCVEPCVW-------RCQHYQCTKLCSEPCNRPPCYVPC---TKLL 1544
C + C G CSP C RCQ +LC E + P C +PC
Sbjct: 314 CSQHCDCHNGGQCSPTTGACECEPGYKGPRCQE----RLCPEGLHGPGCTLPCPCDADNT 369
Query: 1545 VCGHPCIGLC-------GEPCPKKCRICHMDEVTQI 1573
+ HP G C G C + C + + + Q+
Sbjct: 370 ISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQL 405
Score = 44.3 bits (103), Expect = 0.001
Identities = 70/274 (25%), Positives = 96/274 (35%), Gaps = 69/274 (25%)
Query: 1288 CSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMKPCQKVICQE-------GHRCPLVCFQE 1340
CS+ C G +C P D S +C + +CQ GH C
Sbjct: 575 CSVSCSCENG------GSCSPEDGS---CECAPGFRGPLCQRICPPGFYGHGC------- 618
Query: 1341 CQPCQVKVPKTIPRCGH-EQMVPCSVPESDFCCQEPCSKSLRCGHRCSHPCGEDCVQLCS 1399
QPC + V + P C H + C S C + C+ G+DC QLCS
Sbjct: 619 AQPCPLCVHSSRP-CHHISGICECLPGFSGALCNQVCAGGY---------FGQDCAQLCS 668
Query: 1400 EMVTIKLKCGHSQPVKCGHVEG---LLYGGLLVKCTTKCGTIL---DCGHPCPGSCH--- 1450
C ++ C ++G G + C+ C C H C SCH
Sbjct: 669 --------CANNG--TCSPIDGSCQCFPGWIGKDCSQACPPGFWGPACFHAC--SCHNGA 716
Query: 1451 --SCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNR----CVH--SQCKKK 1502
S +G H C P L C+ +C G+ C R CQ + C H +C +
Sbjct: 717 SCSAEDGACH--C-TPGWTGLFCTQRCPAAFFGK--DCGRVCQCQNGASCDHISGKCTCR 771
Query: 1503 CGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPC 1536
G C + C Y C +LC E N C
Sbjct: 772 TGFTGQHCEQRCAPGTFGYGCQQLC-ECMNNSTC 804
Score = 37.7 bits (86), Expect = 0.11
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 23/110 (20%)
Query: 1445 CPGSCHS-------CFEGRFHERCQQPCKRLLICSHKCQ-EPCIGECPPCQRTCQNRCVH 1496
CPG S C E H RC P C EP G P C C +
Sbjct: 89 CPGYYESGDFCIPLCTEECVHGRCVSP--------DTCHCEPGWGG-PDCSSGCDSDHWG 139
Query: 1497 SQCKKKC----GELCSPCVEPCVWRC--QHYQCTKLCSEPCNRPPCYVPC 1540
C +C G LC+P CV + ++C +LC+ + C +PC
Sbjct: 140 PHCSNRCQCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPC 189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,461,027
Number of Sequences: 37866
Number of extensions: 3966740
Number of successful extensions: 18284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 392
Number of HSP's that attempted gapping in prelim test: 15322
Number of HSP's gapped (non-prelim): 2183
length of query: 1918
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1801
effective length of database: 13,817,196
effective search space: 24884769996
effective search space used: 24884769996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.