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Search of human proteins with 27597061
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27597061 ubiquitin protein ligase E3 component n-recognin 2
[Homo sapiens]
(1755 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27597061 ubiquitin protein ligase E3 component n-recognin 2 [... 3588 0.0
gi|28372497 ubiquitin protein ligase E3 component n-recognin 1 [... 1651 0.0
gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens] 153 2e-36
gi|187761324 shootin1 isoform a [Homo sapiens] 38 0.076
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s... 37 0.13
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 37 0.13
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s... 37 0.13
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 37 0.13
gi|50511340 shootin1 isoform b [Homo sapiens] 37 0.17
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 37 0.22
gi|27436951 lamin B2 [Homo sapiens] 36 0.38
gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3 c... 34 1.1
gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3 c... 34 1.1
gi|34850061 superiorcervical ganglia, neural specific 10 [Homo s... 34 1.4
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 1.4
gi|42794779 myosin 18A isoform b [Homo sapiens] 34 1.4
gi|28416946 myosin 18A isoform a [Homo sapiens] 34 1.4
gi|109148542 alanyl-tRNA synthetase [Homo sapiens] 33 2.4
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 33 3.2
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 33 3.2
gi|4505257 moesin [Homo sapiens] 32 4.2
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 32 4.2
gi|32140182 keratin associated protein 10-10 [Homo sapiens] 32 4.2
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 32 4.2
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 32 5.4
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 32 5.4
gi|4758128 doublecortin-like kinase 1 [Homo sapiens] 32 5.4
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 32 7.1
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 32 7.1
gi|31563524 myosin regulatory light chain 9 isoform b [Homo sapi... 32 7.1
>gi|27597061 ubiquitin protein ligase E3 component n-recognin 2 [Homo
sapiens]
Length = 1755
Score = 3588 bits (9305), Expect = 0.0
Identities = 1755/1755 (100%), Positives = 1755/1755 (100%)
Query: 1 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 60
MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK
Sbjct: 1 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 60
Query: 61 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 120
EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT
Sbjct: 61 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 120
Query: 121 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 180
CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL
Sbjct: 121 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 180
Query: 181 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 240
VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE
Sbjct: 181 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 240
Query: 241 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 300
QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV
Sbjct: 241 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 300
Query: 301 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 360
QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS
Sbjct: 301 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 360
Query: 361 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQ 420
KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQ
Sbjct: 361 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQ 420
Query: 421 FFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD 480
FFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD
Sbjct: 421 FFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD 480
Query: 481 LKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGMDPITRQVGQHIEMEPEWEAAFTL 540
LKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGMDPITRQVGQHIEMEPEWEAAFTL
Sbjct: 481 LKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGMDPITRQVGQHIEMEPEWEAAFTL 540
Query: 541 QMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICGHSVETIR 600
QMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICGHSVETIR
Sbjct: 541 QMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICGHSVETIR 600
Query: 601 YCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFPELLPLSELSPPMLIEHPLRCLVLCA 660
YCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFPELLPLSELSPPMLIEHPLRCLVLCA
Sbjct: 601 YCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFPELLPLSELSPPMLIEHPLRCLVLCA 660
Query: 661 QVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFEL 720
QVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFEL
Sbjct: 661 QVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFEL 720
Query: 721 YQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKR 780
YQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKR
Sbjct: 721 YQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKR 780
Query: 781 EIIHQLSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKE 840
EIIHQLSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKE
Sbjct: 781 EIIHQLSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKE 840
Query: 841 FNLYFYHFSRAEQSKAEEAQRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCI 900
FNLYFYHFSRAEQSKAEEAQRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCI
Sbjct: 841 FNLYFYHFSRAEQSKAEEAQRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCI 900
Query: 901 MGTILQWAVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPG 960
MGTILQWAVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPG
Sbjct: 901 MGTILQWAVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPG 960
Query: 961 EAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIME 1020
EAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIME
Sbjct: 961 EAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIME 1020
Query: 1021 ESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDH 1080
ESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDH
Sbjct: 1021 ESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDH 1080
Query: 1081 SPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNR 1140
SPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNR
Sbjct: 1081 SPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNR 1140
Query: 1141 SKFIQDPEKYDPLFMHPDLSCGTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTS 1200
SKFIQDPEKYDPLFMHPDLSCGTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTS
Sbjct: 1141 SKFIQDPEKYDPLFMHPDLSCGTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTS 1200
Query: 1201 YDVENGEFLCPLCECLSNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFL 1260
YDVENGEFLCPLCECLSNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFL
Sbjct: 1201 YDVENGEFLCPLCECLSNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFL 1260
Query: 1261 RKEESTPNNASTKNSENVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVH 1320
RKEESTPNNASTKNSENVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVH
Sbjct: 1261 RKEESTPNNASTKNSENVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVH 1320
Query: 1321 PNEEDPRVPIMCWGSCAYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVA 1380
PNEEDPRVPIMCWGSCAYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVA
Sbjct: 1321 PNEEDPRVPIMCWGSCAYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVA 1380
Query: 1381 SVSVVQGHFCKLFASLVPNDSHEELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTG 1440
SVSVVQGHFCKLFASLVPNDSHEELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTG
Sbjct: 1381 SVSVVQGHFCKLFASLVPNDSHEELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTG 1440
Query: 1441 DLHIFHLVTMAHIIQILLTSCTEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPS 1500
DLHIFHLVTMAHIIQILLTSCTEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPS
Sbjct: 1441 DLHIFHLVTMAHIIQILLTSCTEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPS 1500
Query: 1501 GWHLWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLF 1560
GWHLWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLF
Sbjct: 1501 GWHLWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLF 1560
Query: 1561 QENSEIMNSLIESWCRNSEVKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCP 1620
QENSEIMNSLIESWCRNSEVKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCP
Sbjct: 1561 QENSEIMNSLIESWCRNSEVKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCP 1620
Query: 1621 KSGGDKSRAPTLCLVCGSLLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQ 1680
KSGGDKSRAPTLCLVCGSLLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQ
Sbjct: 1621 KSGGDKSRAPTLCLVCGSLLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQ 1680
Query: 1681 VLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHA 1740
VLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHA
Sbjct: 1681 VLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHA 1740
Query: 1741 QEANQTLVGIDWQHL 1755
QEANQTLVGIDWQHL
Sbjct: 1741 QEANQTLVGIDWQHL 1755
>gi|28372497 ubiquitin protein ligase E3 component n-recognin 1 [Homo
sapiens]
Length = 1749
Score = 1651 bits (4276), Expect = 0.0
Identities = 833/1752 (47%), Positives = 1168/1752 (66%), Gaps = 43/1752 (2%)
Query: 22 EEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGED 81
+ +A W Q D HLA VP+IY +P +K++ Q + P+EWYL GED
Sbjct: 23 QRLASWWDQQVDFYTAFLHHLAQLVPEIYFAEMDPDLEKQEESVQMSIFTPLEWYLFGED 82
Query: 82 PAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMT 141
P KL+ + LCGRVFK GE TYSCRDCA+DPTCVLCM+CF S+H++HRY+M
Sbjct: 83 PDICLEKLKHSGA-FQLCGRVFKSGETTYSCRDCAIDPTCVLCMDCFQDSVHKNHRYKMH 141
Query: 142 TSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRY 201
TS GGGFCDCGDTEAWK GP+C HE + +E L+E+VI + IF +Y
Sbjct: 142 TSTGGGFCDCGDTEAWKTGPFCVNHEPGRAGTIKENSRCP-LNEEVIVQARKIFPSVIKY 200
Query: 202 AVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFA 261
VE+ WE+E ELP +L++ EK++ YYC+LFNDE H+Y+ VIY+LQ+A++C EA
Sbjct: 201 VVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHT 260
Query: 262 TTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTK-PLKVQVMHSSIVAHQNFGLKLLSW 320
T +D++GRR+V+ G + C++AK I ++ ++ PL V+V+HS I+AHQ F L+L SW
Sbjct: 261 TAIDKEGRRAVKAGAYAACQEAKEDIKSHSENVSQHPLHVEVLHSEIMAHQKFALRLGSW 320
Query: 321 LGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLM 380
+ I+ YS R+I CQ L+E PD EN L+ RLML D+KL+KGAR + H+L SS M
Sbjct: 321 MNKIMSYSSDFRQIFCQACLREEPDSENPCLISRLMLWDAKLYKGARKILHELIFSSFFM 380
Query: 381 DLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQFFTAPTLARMLITEENLMSI 440
+++YKKLFA+ F K Y+QLQ++++ DDH+R++S+TALSVQ FT PTLAR LI E+N++S+
Sbjct: 381 EMEYKKLFAMEFVKYYKQLQKEYISDDHDRSISITALSVQMFTVPTLARHLIEEQNVISV 440
Query: 441 IIKTFMDHL-RHRDAQGRFQFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQK 499
I +T ++ L + D +F F+ Y+ K RV ++I DLKY+LISKPT W++ LR +
Sbjct: 441 ITETLLEVLPEYLDRNNKFNFQGYSQ---DKLGRVYAVICDLKYILISKPTIWTERLRMQ 497
Query: 500 FLEGFDAFLELLKCMQGMDPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDE 559
FLEGF +FL++L CMQGM+ I RQVGQHIE++P+WEAA +QM+L +++ M Q+WCA DE
Sbjct: 498 FLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQMQLKNILLMFQEWCACDE 557
Query: 560 KVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLA 619
++L+ AYK+C +M+C + + + S CGHS+ET Y VS++ VSIHLP+SR LA
Sbjct: 558 ELLLVAYKECHKAVMRCSTSFISSSKTVVQS-CGHSLETKSYRVSEDLVSIHLPLSRTLA 616
Query: 620 GLHVLLSKSEVAYKFPELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIY 679
GLHV LS+ + E + + +L+E+PLRCLVL AQV A MWRRNG SL++Q++
Sbjct: 617 GLHVRLSRLGAVSRLHEFVSFEDFQVEVLVEYPLRCLVLVAQVVAEMWRRNGLSLISQVF 676
Query: 680 YYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITH 739
YY +VKCR EM+DKD++MLQ G S+MDPN FL+++L R+EL + F+ K S++
Sbjct: 677 YYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELAEAFN-----KTISTK--D 729
Query: 740 KDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKS 799
+D+++Q NTLIEEML ++I +VGER+ PGVG V + REIIH L I+PM HS + K+
Sbjct: 730 QDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEPMPHSAIAKN 789
Query: 800 LPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEA 859
LPE+EN ETG+E+VI VA FKKPG++G G+YELK E K+FN+YFYH+S+ + SKAE
Sbjct: 790 LPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSKTQHSKAEHM 849
Query: 860 QRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSES 919
Q+K ++Q +D ALPPP P FCP F+ ++N+L D+M+ I+ T+ + A++ + W+E
Sbjct: 850 QKKRRKQENKDEALPPPPPPEFCPAFSKVINLLNCDIMMYILRTVFERAIDTDSNLWTEG 909
Query: 920 MLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNA 979
MLQ H++ + L EEKQ L+ EE V TF F K S+ G + N I +LE L+
Sbjct: 910 MLQMAFHILALGLLEEKQQLQKAPEEEV-TFDFYHKASRLGSSAMN---IQMLLEKLKGI 965
Query: 980 PYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIM---EESSRDKDKAERKRKAE 1036
P LE KDMI WIL+ F+ VK++RE S VA T G+ +E + DK+KAERKRKAE
Sbjct: 966 PQLEGQKDMITWILQMFDTVKRLREKSCLI-VATTSGSESIKNDEITHDKEKAERKRKAE 1024
Query: 1037 IARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDH--SPVASDMTLTALGP 1094
ARL R+KIMAQMS +Q++FI+ +K ++ T E+ ++++ +P SD + ALGP
Sbjct: 1025 AARLHRQKIMAQMSALQKNFIETHKLMYDNTSEMPGKEDSIMEEESTPAVSDYSRIALGP 1084
Query: 1095 AQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQ-DPEKYDPL 1153
+ +++ +TCILCQEEQEVK+E+ AMVL+A VQ+ST L+++R K I+ E DPL
Sbjct: 1085 KRGPSVTEKEVLTCILCQEEQEVKIENNAMVLSACVQKSTALTQHRGKPIELSGEALDPL 1144
Query: 1154 FMHPDLSCGTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTS-YDVENGEFLCPL 1212
FM PDL+ GT+T SCGH+MHA CWQ+YF++VQ Q+R +H +D+E+GE+LCPL
Sbjct: 1145 FMDPDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQR-----IHVDLFDLESGEYLCPL 1199
Query: 1213 CECLSNTVIPLL-LPPRNIFNNRLNFSDQP-NLTQWIRTISQQIKALQFLRKEESTPNNA 1270
C+ L NTVIP++ L P+ I + + Q L +WI+T+ +I + P
Sbjct: 1200 CKSLCNTVIPIIPLQPQKINSENADALAQLLTLARWIQTVLARISGYNIRHAKGENPIPI 1259
Query: 1271 STKNSENVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPI 1330
L+ I YS SIKEM+ F T Y++GLKV P+E DPRVP+
Sbjct: 1260 FFNQGMGDSTLEFHSILSFGVESSIKYSNSIKEMVILFATTIYRIGLKVPPDERDPRVPM 1319
Query: 1331 MCWGSCAYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFC 1390
+ W +CA+TIQ+IE +L DE KPLFG L R + L++L +FA A ++Q H
Sbjct: 1320 LTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAVAQRITCPQVLIQKHLV 1379
Query: 1391 KLFASLVPNDSHEELPCILDIDMFHLLVGLVLAFPALQCQDF-----SGISLGTGDLHIF 1445
+L + ++PN E+ PC+L ID+FH+LVG VLAFP+L D S +S L++F
Sbjct: 1380 RLLSVVLPNIKSEDTPCLLSIDLFHVLVGAVLAFPSLYWDDPVDLQPSSVSSSYNHLYLF 1439
Query: 1446 HLVTMAHIIQILLTSCTEENGMDQENPPCEEESAVLALYKTLHQYT-GSALKEIPSGWHL 1504
HL+TMAH++QILLT T + Q EE + + + + QYT GS +IP GW+L
Sbjct: 1440 HLITMAHMLQILLTVDTGLP-LAQVQEDSEEAHSASSFFAEISQYTSGSIGCDIP-GWYL 1497
Query: 1505 WRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTS-HFEHLCSYLSLPNNLICLFQEN 1563
W S++ GI P+L+C+ALFFHYL GV P ++ + LCSYLSLP NL LFQE
Sbjct: 1498 WVSLKNGITPYLRCAALFFHYLLGVTPPEELHTNSAEGEYSALCSYLSLPTNLFLLFQEY 1557
Query: 1564 SEIMNSLIESWCRNSEVKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSG 1623
+ + L++ WC + + L+ + +RYPR+ N LI LP+DYS L+NQAS+F CP+S
Sbjct: 1558 WDTVRPLLQRWCADPALLNCLKQKNTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRSA 1617
Query: 1624 GDKSRAPTLCLVCGSLLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLF 1683
D+ + P LCL CG++LCSQ+ CCQ + GE+VGAC H CG+GV IFL++REC+V+
Sbjct: 1618 DDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVVL 1677
Query: 1684 LAGKTKGCFYSPPYLDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEA 1743
+ GK +GC Y PYLD+YGETD GL+RGNPLHL +ER++K+ +W QH + EEI +QE
Sbjct: 1678 VEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQET 1737
Query: 1744 NQTLVGIDWQHL 1755
NQ L G +WQ L
Sbjct: 1738 NQMLFGFNWQLL 1749
>gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]
Length = 1888
Score = 153 bits (386), Expect = 2e-36
Identities = 193/800 (24%), Positives = 322/800 (40%), Gaps = 162/800 (20%)
Query: 1008 TSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQT 1067
T PV + T E+ + DK+ ER++KA R R++K++A+ + Q+ F++
Sbjct: 1161 TPPVPPKKVTAAEKKTLDKE--ERRQKA---RERQQKLLAEFASRQKSFMET-------A 1208
Query: 1068 LELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLA 1127
+++D+ + + M +T A+ QV E C++C + E R L
Sbjct: 1209 MDVDSPENDI--------PMEITT---AEPQVSEA--VYDCVICGQSGPSS-EDRPTGLV 1254
Query: 1128 AFVQRSTVLSKNRSKF------IQDPEKYDP----LFMHP-----------DLSC----- 1161
+Q S+VL + R I + E+ P +H D SC
Sbjct: 1255 VLLQASSVLGQCRDNVEPKKLPISEEEQIYPWDTCAAVHDVRLSLLQRYFKDSSCLLAVS 1314
Query: 1162 -----GTHTSSCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECL 1216
G + +CGH +H C + Y +S+ R Q L+ + V+ GEF CPLC
Sbjct: 1315 IGWEGGVYVQTCGHTLHIDCHKSYMESL-----RNDQVLQ---GFSVDKGEFTCPLCRQF 1366
Query: 1217 SNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSE 1276
+N+V+P P N+ NN W R + K++Q L KE
Sbjct: 1367 ANSVLPCY-PGSNVENN-----------PWQRPSN---KSIQDLIKE------------- 1398
Query: 1277 NVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSC 1336
V+ELQ G P + S+ ++ ++ T K P + S
Sbjct: 1399 -VEELQGRPGAFPS---ETNLSKEMESVMKDIKNTTQKKYRDYSKTPGSPDNDFLFMYSV 1454
Query: 1337 AYTIQSIERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKL--FA 1394
A T +E I + G CL L A H + S+ + KL
Sbjct: 1455 ARTNLELELIHRGGNLCSGGASTAGKRSCLNQLFHVLALHMRLYSIDSEYNPWRKLTQLE 1514
Query: 1395 SLVPNDSHEE----LPCILDIDMFHLLVGLVLAFPA-LQCQDFSGISLGTGDLHIFHLVT 1449
+ P +EE +P IL D+ LL+ +L P L+ F+ I + + +
Sbjct: 1515 EMNPQLGYEEQQPEVP-ILYHDVTSLLLIQILMMPQPLRKDHFTCI------VKVLFTLL 1567
Query: 1450 MAHIIQILLTSCTEEN--------GMDQENPPCEEESAVLALYKTLHQYTGSALKEI--- 1498
+ L C+EE+ + + E+ VL + + G E
Sbjct: 1568 YTQALAALSVKCSEEDRSAWKHAGALKKSTCDAEKSYEVLLSFVISELFKGKLYHEEGTQ 1627
Query: 1499 ------PSGWH---LWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTSHFEHLCSY 1549
P W + + ++ +PFL+ ++L H+L G P F L S
Sbjct: 1628 ECAMVNPIAWSPESMEKCLQDFCLPFLRITSLLQHHLFGEDLP---SCQEEEEFSVLASC 1684
Query: 1550 LSLPNNLICLFQENSEIMNS-----------LIESWCRNSEVKRYLE--GERDAIRYPRE 1596
L L L +Q +++ +I WC E+K + E E+ +E
Sbjct: 1685 LGL---LPTFYQTEHPFISASCLDWPVPAFDIITQWC--FEIKSFTERHAEQGKALLIQE 1739
Query: 1597 SN----KLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQTELE 1652
S L+ LPE+Y+++ +C + P +CLVCG+ +C + CC+ +
Sbjct: 1740 SKWKLPHLLQLPENYNTIFQYYHRKTCSVCT-KVPKDPAVCLVCGTFVCLKGLCCKQQSY 1798
Query: 1653 GEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPYLDDYGETDQGLRRGN 1712
E C H+ +CG+G GIFL + ++ + G + C + YLD +GE D+ LRRG
Sbjct: 1799 CE----CVLHSQNCGAGTGIFLLINASVIIIIRGH-RFCLWGSVYLDAHGEEDRDLRRGK 1853
Query: 1713 PLHLCKERFKKIQKLWHQHS 1732
PL++CKER+K +++ W H+
Sbjct: 1854 PLYICKERYKVLEQQWISHT 1873
Score = 124 bits (312), Expect = 6e-28
Identities = 134/607 (22%), Positives = 255/607 (42%), Gaps = 86/607 (14%)
Query: 374 FMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVS--VTALSVQFFTAPTLARML 431
F+ ++L D +YK F F ++Y + + + +S + +SVQ F+ LAR +
Sbjct: 401 FLLNMLPDQEYKVAFTKTFVQHYAFIMKTLKKSHESDTMSNRIVHISVQLFSNEELARQV 460
Query: 432 ITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILDLKYVLISKPTE 491
E L+ I++ + + + Q E + ++++ L+ T
Sbjct: 461 TEECQLLDIMVTVLLYMMESCLIKSELQDEENSL----------HVVVNCGEALLKNNTY 510
Query: 492 WS-----------DELRQKFLEGFD---AFLELLKCMQGMDPITRQVGQHIEMEPE-WEA 536
W + ++FLE ++ + QGM+ R++ +H+E E + + A
Sbjct: 511 WPLVSDFINILSHQSVAKRFLEDHGLLVTWMNFVSFFQGMNLNKRELNEHVEFESQTYYA 570
Query: 537 AFTLQMKL-THVISMMQDWCASDE--KVLIEAYKKCLAVLMQCHGGYTDGEQPITLSICG 593
AF +++ + + C E + + CL L ++P
Sbjct: 571 AFAAELEACAQPMWGLLSHCKVRETQEYTRNVVRYCLEALQDWFDAINFVDEP------- 623
Query: 594 HSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP--ELLPLSELSPPMLIEH 651
+ +V+ HLP+ R A + LSK+ + +LP E+ ++I H
Sbjct: 624 ----------APNQVTFHLPLHRYYA---MFLSKAVKCQELDLDSVLPDQEMLMKLMI-H 669
Query: 652 PLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFL 711
PL+ A++H+ MW RNG + Q Y M D D+ +LQ S +DP++F+
Sbjct: 670 PLQIQASLAEIHSNMWVRNGLQIKGQAMTYVQSHFCNSMIDPDIYLLQVCASRLDPDYFI 729
Query: 712 MIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQ 771
+ RF++ + + + + H+ +++E L +++L+ R G+
Sbjct: 730 SSVFERFKVVDLLTMASQHQNTVLDAEHE------RSMLEGALTFLVILLSLRLHLGM-- 781
Query: 772 VNATDEIKR-EIIHQLSIKPMAHSELVKSLPEDENKETGM-------ESVIEAVAHFKKP 823
+ DEI R E++ QL + HS L+ +PE+ N ++G+ ESV+ AVA FK P
Sbjct: 782 --SDDEILRAEMVAQLCMNDRTHSSLLDLIPENPNPKSGIIPGSYSFESVLSAVADFKAP 839
Query: 824 -----GLTGRGMYELKPEC-AKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDTALPPPV 877
G +GMY K E +EF+ + + A + ++ P
Sbjct: 840 VFEPGGSMQQGMYTPKAEVWDQEFDPVMVILRTVYRRDVQSAMDRYTAFLKQSGKFPGNP 899
Query: 878 LPPF------CPLFASLVNILQSDVMLCIMGTIL-QWAVEHNGYAWSESMLQRVLHLIGM 930
PP+ P + L+ +L + ++ T+L + ++H SE +L VL+LI +
Sbjct: 900 WPPYKKRTSLHPSYKGLMRLLHCKTLHIVLFTLLYKILMDHQNL--SEHVLCMVLYLIEL 957
Query: 931 ALQEEKQ 937
L+ +
Sbjct: 958 GLENSAE 964
Score = 77.8 bits (190), Expect = 9e-14
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 73 MEWYLCGEDPAFGFPKL---EQANKPSHLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFL 129
+EW C G+ + +A P+ LCG V+ Y CR C + P LC ECF
Sbjct: 91 LEWCKCLLAGGGGYDEFCAAVRAYDPAALCGLVWTANFVAYRCRTCGISPCMSLCAECFH 150
Query: 130 GSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHEL-NTSEIEEEEDPLVHLSEDVI 188
H H + M S GG CDCGD+ +E +C++H++ ++S I L+ +SE V+
Sbjct: 151 QGDHTGHDFNMFRSQAGGACDCGDSNVMRESGFCKRHQIKSSSNIPCVPKDLLMMSEFVL 210
Query: 189 AR 190
R
Sbjct: 211 PR 212
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 38.1 bits (87), Expect = 0.076
Identities = 78/367 (21%), Positives = 135/367 (36%), Gaps = 59/367 (16%)
Query: 674 LVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRF 733
LV I + VK + + + +V L+ + N M+ + +E Q+ + R
Sbjct: 172 LVEVIEEVNKVKQEKTVLNSEV--LEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRK 229
Query: 734 SSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAH 793
+E +++ + N L + L+ + P + A DE ++ QL + + H
Sbjct: 230 KAESFAQEMFIEQNKLKRQSHLLLQSSI-----PDQQLLKALDE-NAKLTQQLEEERIQH 283
Query: 794 SELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQ 853
+ VK L E ET + + H K L EL E KE L + + +
Sbjct: 284 QQKVKELEEQLENETLHKEI-----HNLKQQL------ELLEEDKKELELKYQNSEEKAR 332
Query: 854 SKAEEAQRKLKRQNREDTALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNG 913
+ KR N+ + ++PPP PP PL N ++S +
Sbjct: 333 NLKHSVDELQKRVNQSENSVPPPPPPP-PPLPPPPPNPIRSLM----------------- 374
Query: 914 YAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAML 973
SM+++ H G ++EK TEE VT Q + + + K + +
Sbjct: 375 -----SMIRKRSHPSGSGAKKEKATQPETTEE--VTDLKRQAVEEMMDRIKKGVHLRPVN 427
Query: 974 ETLQNAPYLEVHK------DMIRWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKD 1027
+T + E K D ++ IL T N R P E S + +
Sbjct: 428 QTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDP---------ENSETELE 478
Query: 1028 KAERKRK 1034
+ R+RK
Sbjct: 479 RILRRRK 485
>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
sapiens]
Length = 554
Score = 37.4 bits (85), Expect = 0.13
Identities = 82/384 (21%), Positives = 138/384 (35%), Gaps = 57/384 (14%)
Query: 787 SIKPMAHSELVKSLPEDENKETGMESVI-EAVAHFKKPGLTGRGMYELKPECAKEFNLYF 845
S +P A E V S G + + T G +LK E A+
Sbjct: 164 SSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAE------ 217
Query: 846 YHFSRAEQSKAEEAQRKLKRQNR---EDTALPPPVLP------PFCPLFASLVNILQSDV 896
+R E K E+ + QN + PPPV P P PL + + V
Sbjct: 218 ---TRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCITASDTPV 274
Query: 897 MLCIMGTILQW-AVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQK 955
+L +G L A++ + W+E R G L +++ + T + + T Q
Sbjct: 275 VLVSVGADLPVSALDPSQLLWAEEPTNRTTLYSGTGLSVNRENAKCFTTKEELGKTVPQL 334
Query: 956 ISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETE 1015
++ PG ++S S A + E H++ + +S P+ T+
Sbjct: 335 LT-PGLMGESSESFSASED--------EGHREY------------QANDSDSDGPILYTD 373
Query: 1016 GTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTS 1075
E+ D+D + A R RR+ + ++ E+K + Q+T E +
Sbjct: 374 D---EDEDEDEDGSGESALASKIR-RRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEI 429
Query: 1076 AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVE-----SRAMVL---A 1127
+ + + T+ EQR + +EEQE K+E SR + L
Sbjct: 430 ----RQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTV 485
Query: 1128 AFVQRSTVLSKNRSKFIQDPEKYD 1151
A +Q +L N + D YD
Sbjct: 486 AELQARRILRFNEYVEVTDSPDYD 509
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 37.4 bits (85), Expect = 0.13
Identities = 82/384 (21%), Positives = 138/384 (35%), Gaps = 57/384 (14%)
Query: 787 SIKPMAHSELVKSLPEDENKETGMESVI-EAVAHFKKPGLTGRGMYELKPECAKEFNLYF 845
S +P A E V S G + + T G +LK E A+
Sbjct: 244 SSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAE------ 297
Query: 846 YHFSRAEQSKAEEAQRKLKRQNR---EDTALPPPVLP------PFCPLFASLVNILQSDV 896
+R E K E+ + QN + PPPV P P PL + + V
Sbjct: 298 ---TRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCITASDTPV 354
Query: 897 MLCIMGTILQW-AVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQK 955
+L +G L A++ + W+E R G L +++ + T + + T Q
Sbjct: 355 VLVSVGADLPVSALDPSQLLWAEEPTNRTTLYSGTGLSVNRENAKCFTTKEELGKTVPQL 414
Query: 956 ISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETE 1015
++ PG ++S S A + E H++ + +S P+ T+
Sbjct: 415 LT-PGLMGESSESFSASED--------EGHREY------------QANDSDSDGPILYTD 453
Query: 1016 GTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTS 1075
E+ D+D + A R RR+ + ++ E+K + Q+T E +
Sbjct: 454 D---EDEDEDEDGSGESALASKIR-RRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEI 509
Query: 1076 AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVE-----SRAMVL---A 1127
+ + + T+ EQR + +EEQE K+E SR + L
Sbjct: 510 ----RQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTV 565
Query: 1128 AFVQRSTVLSKNRSKFIQDPEKYD 1151
A +Q +L N + D YD
Sbjct: 566 AELQARRILRFNEYVEVTDSPDYD 589
>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
sapiens]
Length = 565
Score = 37.4 bits (85), Expect = 0.13
Identities = 82/384 (21%), Positives = 138/384 (35%), Gaps = 57/384 (14%)
Query: 787 SIKPMAHSELVKSLPEDENKETGMESVI-EAVAHFKKPGLTGRGMYELKPECAKEFNLYF 845
S +P A E V S G + + T G +LK E A+
Sbjct: 175 SSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAE------ 228
Query: 846 YHFSRAEQSKAEEAQRKLKRQNR---EDTALPPPVLP------PFCPLFASLVNILQSDV 896
+R E K E+ + QN + PPPV P P PL + + V
Sbjct: 229 ---TRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCITASDTPV 285
Query: 897 MLCIMGTILQW-AVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQK 955
+L +G L A++ + W+E R G L +++ + T + + T Q
Sbjct: 286 VLVSVGADLPVSALDPSQLLWAEEPTNRTTLYSGTGLSVNRENAKCFTTKEELGKTVPQL 345
Query: 956 ISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETE 1015
++ PG ++S S A + E H++ + +S P+ T+
Sbjct: 346 LT-PGLMGESSESFSASED--------EGHREY------------QANDSDSDGPILYTD 384
Query: 1016 GTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTS 1075
E+ D+D + A R RR+ + ++ E+K + Q+T E +
Sbjct: 385 D---EDEDEDEDGSGESALASKIR-RRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEI 440
Query: 1076 AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVE-----SRAMVL---A 1127
+ + + T+ EQR + +EEQE K+E SR + L
Sbjct: 441 ----RQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTV 496
Query: 1128 AFVQRSTVLSKNRSKFIQDPEKYD 1151
A +Q +L N + D YD
Sbjct: 497 AELQARRILRFNEYVEVTDSPDYD 520
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 37.4 bits (85), Expect = 0.13
Identities = 82/384 (21%), Positives = 138/384 (35%), Gaps = 57/384 (14%)
Query: 787 SIKPMAHSELVKSLPEDENKETGMESVI-EAVAHFKKPGLTGRGMYELKPECAKEFNLYF 845
S +P A E V S G + + T G +LK E A+
Sbjct: 255 SSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAE------ 308
Query: 846 YHFSRAEQSKAEEAQRKLKRQNR---EDTALPPPVLP------PFCPLFASLVNILQSDV 896
+R E K E+ + QN + PPPV P P PL + + V
Sbjct: 309 ---TRVESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAPPLPLEDQCITASDTPV 365
Query: 897 MLCIMGTILQW-AVEHNGYAWSESMLQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQK 955
+L +G L A++ + W+E R G L +++ + T + + T Q
Sbjct: 366 VLVSVGADLPVSALDPSQLLWAEEPTNRTTLYSGTGLSVNRENAKCFTTKEELGKTVPQL 425
Query: 956 ISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETE 1015
++ PG ++S S A + E H++ + +S P+ T+
Sbjct: 426 LT-PGLMGESSESFSASED--------EGHREY------------QANDSDSDGPILYTD 464
Query: 1016 GTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTS 1075
E+ D+D + A R RR+ + ++ E+K + Q+T E +
Sbjct: 465 D---EDEDEDEDGSGESALASKIR-RRDTLAIKLGNRPSKKELEDKNILQRTSEEERQEI 520
Query: 1076 AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVE-----SRAMVL---A 1127
+ + + T+ EQR + +EEQE K+E SR + L
Sbjct: 521 ----RQQIGTKLVRRLSQRPTTEELEQRNILKQKNEEEEQEAKMELKRRLSRKLSLRPTV 576
Query: 1128 AFVQRSTVLSKNRSKFIQDPEKYD 1151
A +Q +L N + D YD
Sbjct: 577 AELQARRILRFNEYVEVTDSPDYD 600
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 37.0 bits (84), Expect = 0.17
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 19/207 (9%)
Query: 674 LVNQIYYYHNVKCRREMFDKDVVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRF 733
LV I + VK + + + +V L+ + N M+ + +E Q+ + R
Sbjct: 172 LVEVIEEVNKVKQEKTVLNSEV--LEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRK 229
Query: 734 SSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAH 793
+E +++ + N L + L+ + P + A DE ++ QL + + H
Sbjct: 230 KAESFAQEMFIEQNKLKRQSHLLLQSSI-----PDQQLLKALDE-NAKLTQQLEEERIQH 283
Query: 794 SELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQ 853
+ VK L E ET + + H K L EL E KE L + + +
Sbjct: 284 QQKVKELEEQLENETLHKEI-----HNLKQQL------ELLEEDKKELELKYQNSEEKAR 332
Query: 854 SKAEEAQRKLKRQNREDTALPPPVLPP 880
+ KR N+ + ++PPP PP
Sbjct: 333 NLKHSVDELQKRVNQSENSVPPPPPPP 359
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 36.6 bits (83), Expect = 0.22
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 1024 RDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLE 1069
R+K ER+R+ E RL+ E+ A + E QR +++NKE ++ ++
Sbjct: 171 REKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQ 216
>gi|27436951 lamin B2 [Homo sapiens]
Length = 600
Score = 35.8 bits (81), Expect = 0.38
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 1017 TIMEESSRDKDKAERKRKAEIARLRREKI---MAQMSEMQRHFIDENKELFQQTLELDAS 1073
++ EE R+ + +R E+ R+++ MAQ E R DE L++ LEL+ +
Sbjct: 204 SVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYK--LELEQT 261
Query: 1074 TSAVLDHSPVASDMTLTALGPAQTQVPEQR 1103
A LD + ++SD A A+ ++ E R
Sbjct: 262 YQAKLDSAKLSSDQNDKAASAAREELKEAR 291
>gi|239749462 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 2 [Homo sapiens]
Length = 2277
Score = 34.3 bits (77), Expect = 1.1
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 105 VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDC 151
+ + + CR C + + C EC G H+ H +++ + +CDC
Sbjct: 668 INQDIFECRTCGLLESLCCCTEC-AGVCHKGHDWKLKRTSPTAYCDC 713
>gi|113420453 PREDICTED: similar to ubiquitin protein ligase E3
component n-recognin 5 isoform 1 [Homo sapiens]
Length = 2796
Score = 34.3 bits (77), Expect = 1.1
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 105 VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDC 151
+ + + CR C + + C EC G H+ H +++ + +CDC
Sbjct: 1187 INQDIFECRTCGLLESLCCCTEC-AGVCHKGHDWKLKRTSPTAYCDC 1232
>gi|34850061 superiorcervical ganglia, neural specific 10 [Homo
sapiens]
Length = 179
Score = 33.9 bits (76), Expect = 1.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 1007 PTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQ 1066
P SP++E T+ +D E ++K E A RR+ AQ+ + + +E+ Q+
Sbjct: 60 PPSPISEAPRTLASPKKKDLSLEEIQKKLEAAEERRKSQEAQVLKQLAEKREHEREVLQK 119
Query: 1067 TLE 1069
LE
Sbjct: 120 ALE 122
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 33.9 bits (76), Expect = 1.4
Identities = 38/187 (20%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 930 MALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI 989
M +E +Q LE + +E+ K + K++ ++ ++ N + +++
Sbjct: 1955 MLRKEHQQELEILKKEYDQEREEKIKQEQEDLELKHNSTLKQLMREF-NTQLAQKEQELE 2013
Query: 990 RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKD-KAERKRKAEIARLRREKIMAQ 1048
I +T N +++ S ET + + + +D D K KR EI R E++ A+
Sbjct: 2014 MTIKETINKAQEVEAELLESHQEETNQLLKKIAEKDDDLKRTAKRYEEILDAREEEMTAK 2073
Query: 1049 MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVTC 1108
+ ++Q ++E ++ +QQ LE + +P ++T+ L QTQ+ ++ ++
Sbjct: 2074 VRDLQTQ-LEELQKKYQQKLE--------QEENPGNDNVTIMEL---QTQLAQKTTLISD 2121
Query: 1109 ILCQEEQ 1115
+E++
Sbjct: 2122 SKLKEQE 2128
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 33.9 bits (76), Expect = 1.4
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 1019 MEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAV- 1077
+EE D ++ +K KA +A+ R+ +AQ++++Q + NKE + +L A S V
Sbjct: 1748 LEEDQEDMNELMKKHKAAVAQASRD--LAQINDLQAQLEEANKEKQELQEKLQALQSQVE 1805
Query: 1078 -LDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRST-- 1134
L+ S V + Q + R+ T + + Q ++ES A L +++ T
Sbjct: 1806 FLEQSMVDKSL-------VSRQEAKIRELETRLEFERTQVKRLESLASRLKENMEKLTEE 1858
Query: 1135 ----VLSKNRSK 1142
+ ++NR K
Sbjct: 1859 RDQRIAAENREK 1870
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 33.9 bits (76), Expect = 1.4
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 1019 MEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDENKELFQQTLELDASTSAV- 1077
+EE D ++ +K KA +A+ R+ +AQ++++Q + NKE + +L A S V
Sbjct: 1748 LEEDQEDMNELMKKHKAAVAQASRD--LAQINDLQAQLEEANKEKQELQEKLQALQSQVE 1805
Query: 1078 -LDHSPVASDMTLTALGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRST-- 1134
L+ S V + Q + R+ T + + Q ++ES A L +++ T
Sbjct: 1806 FLEQSMVDKSL-------VSRQEAKIRELETRLEFERTQVKRLESLASRLKENMEKLTEE 1858
Query: 1135 ----VLSKNRSK 1142
+ ++NR K
Sbjct: 1859 RDQRIAAENREK 1870
>gi|109148542 alanyl-tRNA synthetase [Homo sapiens]
Length = 968
Score = 33.1 bits (74), Expect = 2.4
Identities = 45/221 (20%), Positives = 86/221 (38%), Gaps = 35/221 (15%)
Query: 921 LQRVLHLIGMALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAP 980
L+ H + E+ + + VT QK + E+ K S++ Q AP
Sbjct: 728 LRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEAKVKAQTAP 787
Query: 981 YLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARL 1040
+V ++ + + E+ T+ + + + ++ R+ K+ +K ++ R
Sbjct: 788 NKDVQRE-----------IADLGEALATAVIPQWQ----KDELRETLKSLKKVMDDLDRA 832
Query: 1041 RREKIMAQMSEMQRHFIDENKELFQQTLELDASTSA---------VLDHSPVASDMTLTA 1091
+ + ++ E + FID N LE+++ SA HSP S M T
Sbjct: 833 SKADVQKRVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFT- 891
Query: 1092 LGPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQR 1132
V + +TC LCQ Q +R + + +VQ+
Sbjct: 892 -------VDNEAGKITC-LCQVPQ--NAANRGLKASEWVQQ 922
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 32.7 bits (73), Expect = 3.2
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 939 LENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLE-------VHKDMIRW 991
++ + E+ + T+K K GE KN+ +I + ++ ++ K+
Sbjct: 841 VDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLA 900
Query: 992 ILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSE 1051
K + ++K + S S +++E +E R+ DK E+ R E + K + + E
Sbjct: 901 ESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQE--E 958
Query: 1052 MQRHFIDENKELFQQTLELDAST 1074
+ +D NK ++ L L T
Sbjct: 959 KKSSIVDGNKAQHEKPLSLKEKT 981
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 32.7 bits (73), Expect = 3.2
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 939 LENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLE-------VHKDMIRW 991
++ + E+ + T+K K GE KN+ +I + ++ ++ K+
Sbjct: 864 VDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLA 923
Query: 992 ILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSE 1051
K + ++K + S S +++E +E R+ DK E+ R E + K + + E
Sbjct: 924 ESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQE--E 981
Query: 1052 MQRHFIDENKELFQQTLELDAST 1074
+ +D NK ++ L L T
Sbjct: 982 KKSSIVDGNKAQHEKPLSLKEKT 1004
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 32.3 bits (72), Expect = 4.2
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 9/170 (5%)
Query: 979 APYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGTIMEES-SRDKDKA---ERKRK 1034
AP L ++K ++ + + R+ T V + + EE + ++A K+K
Sbjct: 271 APRLRINKRILALCMGNHELYMRRRKPD-TIEVQQMKAQAREEKHQKQMERAMLENEKKK 329
Query: 1035 AEIARLRREKIMAQMSEMQRHF--IDENKELFQQTLELDASTSAVLDHSPVASDMTLTAL 1092
E+A +EKI + E+ I+E + QQ LE + L+ + L
Sbjct: 330 REMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKL 389
Query: 1093 GPAQTQVPEQRQFVTCILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSK 1142
+ + E ++ + +Q+ E A+ +A R + L R K
Sbjct: 390 AKERQEAEEAKE--ALLQASRDQKKTQEQLALEMAELTARISQLEMARQK 437
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.3 bits (72), Expect = 4.2
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 932 LQEEKQHLENVTEEHVVTFTFT--QKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI 989
+ EE+ + E +E V TF +K PG + A+ ET Q A E + +
Sbjct: 76 MMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTETHQLAELNEKKNERL 135
Query: 990 RWIL---------KTFNAVKKMRESSPTSPVAETEGTIMEESS----------RDKDKAE 1030
R +F+ ++ RE+ +P +++ ESS + K K +
Sbjct: 136 RAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKD 195
Query: 1031 RKRKAEIARLRREKIMAQMSEMQRHFIDENK 1061
R R++E + RRE+ + + R + K
Sbjct: 196 RGRRSESSSPRRERKKSSKKKKHRSESESKK 226
>gi|32140182 keratin associated protein 10-10 [Homo sapiens]
Length = 251
Score = 32.3 bits (72), Expect = 4.2
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 1619 CPKSGGDK---SRAPTLCLVCGSLLCSQSYCCQTELEGEDVGAC-TAHTYSC 1666
CP+S + + AP+L LVC + C S CCQT E AC + +T SC
Sbjct: 22 CPESCCEPCCCAPAPSLTLVCTPVSCVSSPCCQTACE---PSACQSGYTSSC 70
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 32.3 bits (72), Expect = 4.2
Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 1000 KKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQMSEMQRHFIDE 1059
+K E TS E +E+ S +K+ +ERK+K+ R + E+ + ++ + + +D+
Sbjct: 715 RKQLELKVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQAEEEIDEIRKSYQEELDK 774
Query: 1060 NKELFQQTLELDASTSAVLDHSPVASDMTLT-------ALGPAQTQVPEQRQFVTCILCQ 1112
++L ++T + +A S V +++ L A+ + +Q Q V
Sbjct: 775 LRQLLKKT-RVSTDQAAAEQLSLVQAELQTQWEAKCEHLLASAKDEHLQQYQEVCAQRDA 833
Query: 1113 EEQE-VKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEK 1149
+Q+ V+++ + + L A + T L+K + I++ EK
Sbjct: 834 YQQKLVQLQEKCLALQAQI---TALTKQNEQHIKELEK 868
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform 2
[Homo sapiens]
Length = 328
Score = 32.0 bits (71), Expect = 5.4
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 1020 EESSRDKDKAERKRKAEIARLRREKIMAQMSEM 1052
E+SS DK++ R+ +EI R RR K+ A ++E+
Sbjct: 80 EQSSADKERLARENHSEIERRRRNKMTAYITEL 112
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 32.0 bits (71), Expect = 5.4
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 1020 EESSRDKDKAERKRKAEIARLRREKIMAQMSEM 1052
E+SS DK++ R+ +EI R RR K+ A ++E+
Sbjct: 80 EQSSADKERLARENHSEIERRRRNKMTAYITEL 112
>gi|4758128 doublecortin-like kinase 1 [Homo sapiens]
Length = 729
Score = 32.0 bits (71), Expect = 5.4
Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 16/152 (10%)
Query: 266 RDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSII 325
+DG +S++ GDF + T + I+A +GLK+ W +I
Sbjct: 523 QDGSKSLKLGDFGLATIVDGPLYTVCGTPT------YVAPEIIAETGYGLKVDIWAAGVI 576
Query: 326 GYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSD----SKLWKGARSVYHQLFMSSLLMD 381
Y +LC G + L D++++ S W +L LL+D
Sbjct: 577 TYI-----LLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVD 631
Query: 382 LKYKKLFAVRFAKNYQQLQRDFMEDDHERAVS 413
+ ++ AV+ ++ E++H+ +V+
Sbjct: 632 VD-QRFSAVQVLEHPWVNDDGLPENEHQLSVA 662
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 31.6 bits (70), Expect = 7.1
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 21/137 (15%)
Query: 1011 VAETEGTIMEESSRDKDKAERKRKAEIAR-LRREKIMAQMSEMQRHFIDENKELFQQTLE 1069
+A+ E E R++ + ERKR+ E+ + L +++ + + E +R E +E ++ LE
Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442
Query: 1070 LDASTS--------------------AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCI 1109
VL + L AL + Q+ + Q + C
Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCR 502
Query: 1110 LCQEEQEVKVESRAMVL 1126
L + QE++ +++ L
Sbjct: 503 LTTQRQEIESTNKSREL 519
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 31.6 bits (70), Expect = 7.1
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 21/137 (15%)
Query: 1011 VAETEGTIMEESSRDKDKAERKRKAEIAR-LRREKIMAQMSEMQRHFIDENKELFQQTLE 1069
+A+ E E R++ + ERKR+ E+ + L +++ + + E +R E +E ++ LE
Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442
Query: 1070 LDASTS--------------------AVLDHSPVASDMTLTALGPAQTQVPEQRQFVTCI 1109
VL + L AL + Q+ + Q + C
Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCR 502
Query: 1110 LCQEEQEVKVESRAMVL 1126
L + QE++ +++ L
Sbjct: 503 LTTQRQEIESTNKSREL 519
>gi|31563524 myosin regulatory light chain 9 isoform b [Homo
sapiens]
Length = 118
Score = 31.6 bits (70), Expect = 7.1
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 113 RDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSE 172
RD +D + M LG IH DH + T+ G F D E ++E P +K N E
Sbjct: 45 RDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVE 104
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,008,404
Number of Sequences: 37866
Number of extensions: 3264302
Number of successful extensions: 9823
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 9743
Number of HSP's gapped (non-prelim): 102
length of query: 1755
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1639
effective length of database: 13,855,062
effective search space: 22708446618
effective search space used: 22708446618
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.