OTX2 24326

Name: OTX2	Sequence: fasta or formatted (289aa)		NCBI GI: 27436933
Description: orthodenticle homeobox 2 isoform b		Referenced in: Homeobox and Related Proteins Stem Cells and Early Development
Other entries for this name: alt prot [297aa] orthodenticle homeobox 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 20 1 C cysteine 1.7 5 1 D aspartate 3.8 11 1 E glutamate 2.4 7 2 F phenylalanine 3.1 9 1 G glycine 6.6 19 2 H histidine 1.4 4 2 I isoleucine 1.7 5 1 K lysine 4.8 14 3 L leucine 7.6 22 2 M methionine 3.1 9 2 N asparagine 3.5 10 1 P proline 7.6 22 2 Q glutamine 7.6 22 7 R arginine 4.8 14 2 S serine 14.5 42 3 T threonine 8.7 25 2 V valine 4.2 12 1 W tryptophan 1.4 4 1 Y tyrosine 4.5 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 orthodenticle homeobox 2 isoform b OTX2 0.988 orthodenticle homeobox 2 isoform a OTX1 0.548 orthodenticle homeobox 1 CRX 0.427 cone-rod homeobox protein ARGFX 0.135 arginine-fifty homeobox PHOX2A 0.133 paired-like homeobox 2a DRGX 0.126 dorsal root ganglia homeobox PHOX2B 0.124 paired-like homeobox 2b PAX6 0.121 paired box gene 6 isoform a PAX6 0.121 paired box gene 6 isoform b PAX6 0.121 paired box gene 6 isoform a DMBX1 0.119 diencephalon/mesencephalon homeobox 1 isoform a [Hom... DMBX1 0.119 diencephalon/mesencephalon homeobox 1 isoform b [Hom... PITX1 0.117 paired-like homeodomain transcription factor 1 [Hom... PAX3 0.117 paired box 3 isoform PAX3h SHOX 0.115 short stature homeobox isoform SHOXb SHOX 0.115 short stature homeobox isoform SHOXa PAX3 0.115 paired box 3 isoform PAX3i PAX3 0.115 paired box 3 isoform PAX3e PAX3 0.115 paired box 3 isoform PAX3d PAX3 0.115 paired box 3 isoform PAX3 SHOX2 0.113 short stature homeobox 2 isoform a SHOX2 0.113 short stature homeobox 2 isoform b PRRX2 0.113 paired related homeobox 2 PAX3 0.112 paired box 3 isoform PAX3g OTP 0.112 PREDICTED: orthopedia homeobox OTP 0.112 orthopedia homeobox ISX 0.110 intestine-specific homeobox RAX 0.108 retina and anterior neural fold homeobox PRRX1 0.108 paired mesoderm homeobox 1 isoform pmx-1b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.