TNFSF12-TNFSF13 24215

Name: TNFSF12-TNFSF13	Sequence: fasta or formatted (330aa)		NCBI GI: 26051250
Description: TNFSF12-TNFSF13 protein		Referenced in: TNF and Related Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 32 2 C cysteine 1.2 4 1 D aspartate 3.9 13 2 E glutamate 5.8 19 2 F phenylalanine 2.4 8 1 G glycine 8.5 28 1 H histidine 2.4 8 1 I isoleucine 3.0 10 2 K lysine 2.7 9 2 L leucine 10.9 36 3 M methionine 1.2 4 1 N asparagine 2.4 8 1 P proline 5.5 18 1 Q glutamine 7.0 23 1 R arginine 10.9 36 3 S serine 7.9 26 3 T threonine 3.6 12 1 V valine 7.0 23 2 W tryptophan 0.9 3 1 Y tyrosine 3.0 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TNFSF12-TNFSF13 protein TNFSF13 0.487 tumor necrosis factor ligand superfamily, member 13 i... TNFSF12 0.481 tumor necrosis factor (ligand) superfamily, member 12... TNFSF13 0.476 tumor necrosis factor ligand superfamily, member 13 ... TNFSF13 0.419 tumor necrosis factor ligand superfamily, member 13 ... TNFSF13B 0.101 tumor necrosis factor superfamily, member 13b isoform... TNFSF13B 0.092 tumor necrosis factor superfamily, member 13b isofo... EDA 0.036 ectodysplasin A isoform EDA-A1 EDA 0.035 ectodysplasin A isoform EDA-A2 TNF 0.019 tumor necrosis factor alpha LOC727838 0.014 PREDICTED: similar to cancer/testis antigen family ... HDAC7 0.013 histone deacetylase 7 isoform d HDAC7 0.013 histone deacetylase 7 isoform a SUPT6H 0.013 suppressor of Ty 6 homolog CT47A1 0.009 cancer/testis antigen family 47, member A1 CT47A2 0.009 cancer/testis antigen family 47, member A2 CT47A3 0.009 cancer/testis antigen family 47, member A3 CT47A4 0.009 cancer/testis antigen family 47, member A4 CT47A5 0.009 cancer/testis antigen family 47, member A5 CT47A6 0.009 cancer/testis antigen family 47, member A6 CT47A7 0.009 cancer/testis antigen family 47, member A7 CT47A8 0.009 cancer/testis antigen family 47, member A8 CT47A9 0.009 cancer/testis antigen family 47, member A9 CT47A10 0.009 cancer/testis antigen family 47, member A10 LTA 0.009 lymphotoxin alpha precursor LTA 0.009 lymphotoxin alpha precursor CT47A11 0.009 cancer/testis antigen family 47, member A11 MYO18B 0.009 myosin XVIIIB LOC100293792 0.008 PREDICTED: hypothetical protein LOC100290918 0.008 PREDICTED: hypothetical protein XP_002346524 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.