BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|26051233 lactamase, beta isoform b [Homo sapiens] (373 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|26051231 lactamase, beta isoform a [Homo sapiens] 754 0.0 gi|26051233 lactamase, beta isoform b [Homo sapiens] 754 0.0 gi|210147462 von Willebrand factor A domain containing 5B1 [Homo... 43 5e-04 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.002 gi|239752721 PREDICTED: beta-lactamase-like protein ENSP00000383... 40 0.003 gi|239747261 PREDICTED: beta-lactamase-like protein ENSP00000383... 40 0.003 gi|239741085 PREDICTED: beta-lactamase-like protein ENSP00000383... 40 0.003 gi|95147555 microtubule-associated protein 1A [Homo sapiens] 39 0.010 gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 37 0.022 gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 37 0.022 gi|60460889 Myb protein P42POP [Homo sapiens] 35 0.083 gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 35 0.11 gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] 35 0.11 gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] 35 0.11 gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens] 35 0.11 gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens] 35 0.11 gi|23821044 zinc finger/RING finger 2 [Homo sapiens] 35 0.11 gi|147902746 MEX3A protein [Homo sapiens] 35 0.11 gi|239748932 PREDICTED: hypothetical protein XP_002346861 [Homo ... 35 0.14 gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14 gi|239742954 PREDICTED: hypothetical protein XP_002342704 [Homo ... 35 0.14 gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 35 0.14 gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ... 35 0.14 gi|148276998 zinc finger protein 628 [Homo sapiens] 35 0.14 gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 35 0.14 >gi|26051231 lactamase, beta isoform a [Homo sapiens] Length = 547 Score = 754 bits (1946), Expect = 0.0 Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL 60 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL Sbjct: 1 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL 60 Query: 61 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD 120 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD Sbjct: 61 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD 120 Query: 121 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA 180 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA Sbjct: 121 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA 180 Query: 181 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK 240 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK Sbjct: 181 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK 240 Query: 241 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN 300 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN Sbjct: 241 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN 300 Query: 301 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV 360 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV Sbjct: 301 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV 360 Query: 361 QEENEPVIYNRAR 373 QEENEPVIYNRAR Sbjct: 361 QEENEPVIYNRAR 373 >gi|26051233 lactamase, beta isoform b [Homo sapiens] Length = 373 Score = 754 bits (1946), Expect = 0.0 Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL 60 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL Sbjct: 1 MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL 60 Query: 61 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD 120 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD Sbjct: 61 RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD 120 Query: 121 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA 180 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA Sbjct: 121 EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA 180 Query: 181 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK 240 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK Sbjct: 181 GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK 240 Query: 241 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN 300 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN Sbjct: 241 MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN 300 Query: 301 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV 360 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV Sbjct: 301 SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV 360 Query: 361 QEENEPVIYNRAR 373 QEENEPVIYNRAR Sbjct: 361 QEENEPVIYNRAR 373 >gi|210147462 von Willebrand factor A domain containing 5B1 [Homo sapiens] Length = 1215 Score = 42.7 bits (99), Expect = 5e-04 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 65 PAQSPAAPDPEASPLAEPPQE--QSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKDEV 122 P+ P+A + E S +PP E + +P P TPAP + + + S+ L + E+ Sbjct: 772 PSHHPSAFETETSSDWDPPAESQERASPSRPATPAPVLGKALVKGLHDSQRLQWEVSFEL 831 Query: 123 GAPGIVVGVSVDGKEVWSE 141 G PG G + D ++WSE Sbjct: 832 GTPGPERGGAQDA-DLWSE 849 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAP---WSPQTPAPPCSRCFARAIES 110 P + P +P PEAS L+ PP+E ++P SP +P P SR F ES Sbjct: 558 PEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEES 606 Score = 38.9 bits (89), Expect = 0.008 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAP---WSPQTPAPPCSR 102 P +SP +P PEAS L+ PP++ ++P SP +P P SR Sbjct: 612 PEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSR 652 Score = 37.4 bits (85), Expect = 0.022 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRC--FARAIESS 111 P +SP +P PE SP + PP+ L+P + PA P +R +E S Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEES 492 Score = 37.0 bits (84), Expect = 0.029 Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 P +SP +P PEAS L+ PP++ +P +PA P Sbjct: 675 PEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASP 709 Score = 36.6 bits (83), Expect = 0.037 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 53 GVKLAGGLRGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSR 102 GV+L L + P P PE SPL+ PP+E SP +P P SR Sbjct: 423 GVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEE------SPTSPPPEASR 466 Score = 35.4 bits (80), Expect = 0.083 Identities = 14/35 (40%), Positives = 21/35 (60%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 P +SP +P PE SP++ PP+ L P ++P P Sbjct: 576 PEESPMSPPPEESPMSPPPEASRLFPPFEESPLSP 610 Score = 35.4 bits (80), Expect = 0.083 Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 P +SP +P PE SP + PP+ L+P +P P Sbjct: 666 PEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSP 700 Score = 35.0 bits (79), Expect = 0.11 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAP---WSPQTPAPPCSR 102 P +SP +P PEAS L P +E L+P SP +P P SR Sbjct: 585 PEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASR 625 Score = 34.7 bits (78), Expect = 0.14 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Query: 67 QSPAAPDPEASPLAEPPQEQSLAP---WSPQTPAP 98 +SP +P PE SPL+ PP+ L+P SP +P P Sbjct: 605 ESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639 Score = 34.3 bits (77), Expect = 0.19 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Query: 67 QSPAAPDPEASPLAEPPQEQSLAP---WSPQTPAPPCSR 102 ++P +P PEASPL+ P +E L+P P +P P SR Sbjct: 533 ETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASR 571 Score = 33.9 bits (76), Expect = 0.24 Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 67 QSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 +SP +P PE SPL+ PP+ +P +PP Sbjct: 491 ESPLSPPPEESPLSPPPESSPFSPLEESPLSPP 523 Score = 33.5 bits (75), Expect = 0.32 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSR 102 P S +P PE SPL+ PP+E SP +P P SR Sbjct: 657 PVVSRLSPPPEESPLSPPPEE------SPTSPPPEASR 688 Score = 32.3 bits (72), Expect = 0.71 Identities = 12/26 (46%), Positives = 17/26 (65%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAP 90 P SP +P PE SP++ PP+ L+P Sbjct: 630 PEDSPMSPPPEESPMSPPPEVSRLSP 655 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 65 PAQSPAAPDPEA---------SPLAEPPQEQSLAPWSPQTPAPP 99 P + PA+P PEA SPL+ PP+E L+P +P P Sbjct: 471 PEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSP 514 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLA---PWSPQTPAP 98 P SP +P PE SP + PP++ ++ SP P P Sbjct: 693 PEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLP 729 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAP--WSPQTPAPPCSRCFARAIESSRDLLHRIKDEV 122 P + P +P PE PL+ P E SL+P P PP S A + L ++ Sbjct: 903 PGEPPLSPLPEELPLS-PSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPF 961 Query: 123 GAPG 126 GA G Sbjct: 962 GAKG 965 >gi|239752721 PREDICTED: beta-lactamase-like protein ENSP00000383859-like [Homo sapiens] Length = 517 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%) Query: 118 IKDEVGAPGIVVGVSV---DGKEVWSEGLGYADVENRVPCKPE--TVMRIASISKSLTMV 172 ++ + APG+ +V + +W+ G + + P T+ RI+SISK ++ Sbjct: 29 LRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKKNGSDPASGAPNEYTMYRISSISKIFPVL 88 Query: 173 ALAKLWEAGKL-DLDIPVQHYVPEF--------PEKEYEG-----EKVS-------VTTR 211 L +LWE G + LD P++ Y F E +G E+V VT R Sbjct: 89 MLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLR 148 Query: 212 LLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENV 246 + S LSG+ + + + +AL ++K++V Sbjct: 149 RMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDV 183 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/33 (42%), Positives = 22/33 (66%) Query: 303 ESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIV 335 E+L L K+D L PG++ YST ++LLA ++ Sbjct: 174 EALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVL 206 >gi|239747261 PREDICTED: beta-lactamase-like protein ENSP00000383859-like [Homo sapiens] Length = 517 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%) Query: 118 IKDEVGAPGIVVGVSV---DGKEVWSEGLGYADVENRVPCKPE--TVMRIASISKSLTMV 172 ++ + APG+ +V + +W+ G + + P T+ RI+SISK ++ Sbjct: 29 LRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKKNGSDPASGAPNEYTMYRISSISKIFPVL 88 Query: 173 ALAKLWEAGKL-DLDIPVQHYVPEF--------PEKEYEG-----EKVS-------VTTR 211 L +LWE G + LD P++ Y F E +G E+V VT R Sbjct: 89 MLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLR 148 Query: 212 LLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENV 246 + S LSG+ + + + +AL ++K++V Sbjct: 149 RMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDV 183 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/33 (42%), Positives = 22/33 (66%) Query: 303 ESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIV 335 E+L L K+D L PG++ YST ++LLA ++ Sbjct: 174 EALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVL 206 >gi|239741085 PREDICTED: beta-lactamase-like protein ENSP00000383859-like [Homo sapiens] Length = 517 Score = 40.0 bits (92), Expect = 0.003 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%) Query: 118 IKDEVGAPGIVVGVSV---DGKEVWSEGLGYADVENRVPCKPE--TVMRIASISKSLTMV 172 ++ + APG+ +V + +W+ G + + P T+ RI+SISK ++ Sbjct: 29 LRQAMSAPGVAAMSAVVIHNDTVLWTGNFGKKNGSDPASGAPNEYTMYRISSISKIFPVL 88 Query: 173 ALAKLWEAGKL-DLDIPVQHYVPEF--------PEKEYEG-----EKVS-------VTTR 211 L +LWE G + LD P++ Y F E +G E+V VT R Sbjct: 89 MLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLMDGLEQVGPAPRPSPVTLR 148 Query: 212 LLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENV 246 + S LSG+ + + + +AL ++K++V Sbjct: 149 RMASQLSGLPRRLRSTSLLWKGSTQEALNLLKDDV 183 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/33 (42%), Positives = 22/33 (66%) Query: 303 ESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIV 335 E+L L K+D L PG++ YST ++LLA ++ Sbjct: 174 EALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVL 206 >gi|95147555 microtubule-associated protein 1A [Homo sapiens] Length = 2803 Score = 38.5 bits (88), Expect = 0.010 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%) Query: 155 KPETVMRIASISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPE--KEYEGEKVSVTTRL 212 + E V A ++S LAK + K + P + P PE K E + R Sbjct: 337 REEVVEEGAKEARSELAKELAKTEKKAKESSEKPPEK--PAKPERVKTESSEALKAEKRK 394 Query: 213 LISHLSGIRHYEKDIKKVKEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQENE 272 LI G +H ++ I K++E+K + ++ KE +++ EG+ EK D K E Sbjct: 395 LIKDKVGKKHLKEKISKLEEKKDKEKKEIKKERKELKKD-EGRKEEKKDAKK-------E 446 Query: 273 AKCRNSKPGKKK 284 K +++KP KK Sbjct: 447 EKRKDTKPELKK 458 >gi|192807323 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform A [Homo sapiens] Length = 1679 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|192807320 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform F [Homo sapiens] Length = 1613 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|192807318 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform E [Homo sapiens] Length = 1614 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|192807316 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform D [Homo sapiens] Length = 1616 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|192807314 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform C [Homo sapiens] Length = 1617 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|192807312 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|21071056 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B [Homo sapiens] Length = 1647 Score = 37.4 bits (85), Expect = 0.022 Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%) Query: 65 PAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAP---------------------PCSRC 103 P+ +P A P ASP+ PPQ QS P P PAP P Sbjct: 311 PSPAPPAVPPAASPVM-PPQTQS--PGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEIL 367 Query: 104 FARAIESSRDLLHRIKDEVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIA 163 R + HRI++ PG + G + + L + + ++ + MR Sbjct: 368 QEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRD 427 Query: 164 SISKSLTMVALAKLWEAGKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHY 223 + +L AK ++ K + + E EK+ + E+ + +L+ I + Sbjct: 428 T---ALETALNAKAYKRSKRQSLREAR--ITEKLEKQQKIEQERKRRQKHQEYLNSILQH 482 Query: 224 EKDIKKV------KEEKAYKALKMMKENVAFEQEKEGKSNEKNDFTKFKTEQE 270 KD K+ K +K KA+ N EQ+KE + EK + E E Sbjct: 483 AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDE 535 >gi|60460889 Myb protein P42POP [Homo sapiens] Length = 399 Score = 35.4 bits (80), Expect = 0.083 Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 65 PAQSPA---APDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKDE 121 P Q P +P P A PL PP +AP P P PP A + S D L ++ Sbjct: 210 PVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSASDPSLDFLRAQQET 269 Query: 122 VGAPGIVVGVSVDGKEVWSEGL 143 A + G G SE L Sbjct: 270 ANAIRELAGTLRQGLAKLSEAL 291 >gi|156071470 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 [Homo sapiens] Length = 889 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/38 (44%), Positives = 18/38 (47%) Query: 62 GAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 GA PA P P P A P +PP AP PAPP Sbjct: 15 GATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPP 52 Score = 33.9 bits (76), Expect = 0.24 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Query: 58 GGLRGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 GG G +P +PA P P P PPQ+Q P P PAPP Sbjct: 7 GGRPGESPGATPA-PGPPPPPPPAPPQQQ---PPPPPPPAPP 44 >gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] Length = 629 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 7/49 (14%) Query: 43 GLGLGLGLALGVKLAGGLRGAAPAQSPA-----APD--PEASPLAEPPQ 84 GLGLGLGL L K P+++PA AP+ P +SPL +PP+ Sbjct: 16 GLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPE 64 >gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] Length = 614 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 7/49 (14%) Query: 43 GLGLGLGLALGVKLAGGLRGAAPAQSPA-----APD--PEASPLAEPPQ 84 GLGLGLGL L K P+++PA AP+ P +SPL +PP+ Sbjct: 16 GLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPE 64 >gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens] Length = 596 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 7/49 (14%) Query: 43 GLGLGLGLALGVKLAGGLRGAAPAQSPA-----APD--PEASPLAEPPQ 84 GLGLGLGL L K P+++PA AP+ P +SPL +PP+ Sbjct: 16 GLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPE 64 >gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens] Length = 1203 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 7/49 (14%) Query: 43 GLGLGLGLALGVKLAGGLRGAAPAQSPA-----APD--PEASPLAEPPQ 84 GLGLGLGL L K P+++PA AP+ P +SPL +PP+ Sbjct: 16 GLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPE 64 >gi|23821044 zinc finger/RING finger 2 [Homo sapiens] Length = 242 Score = 35.0 bits (79), Expect = 0.11 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Query: 13 AAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGLRGAAPAQSPAAP 72 A G A++ GR + + LP G G G G G + A G PAQ P+A Sbjct: 3 AKQSGPAAANGRTRAYSGSDLPSSSSGGANGTAGGGG---GARAAAA--GRFPAQVPSAH 57 Query: 73 DPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIES 110 P AS A + A +P PA P SR A+ S Sbjct: 58 QPSASGGA------AAAAAAPAAPAAPRSRSLGGAVGS 89 >gi|147902746 MEX3A protein [Homo sapiens] Length = 520 Score = 35.0 bits (79), Expect = 0.11 Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 58 GGLRGAAPAQSPAAPDP-EASPLAEPPQEQSLAPWSPQTPAPP 99 GG G APAQ A P P P A PP + AP + QTP PP Sbjct: 63 GGGGGGAPAQPAAPPQPAPPPPPAAPPAAPTAAP-AAQTPQPP 104 >gi|239748932 PREDICTED: hypothetical protein XP_002346861 [Homo sapiens] Length = 162 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 2/97 (2%) Query: 6 SAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGLRGAAP 65 S TA+ A A++ R R G W G G L GG GAAP Sbjct: 45 SPETAKGAVYASFAAAAKRMSARGRLRTRGGGERWAAGRGSWLQRLSQHGRRGG--GAAP 102 Query: 66 AQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSR 102 P P P S SPQ+ APP R Sbjct: 103 TNKPRGPAPRPSFHRPGGHASQCGLASPQSTAPPARR 139 >gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] Length = 837 Score = 34.7 bits (78), Expect = 0.14 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 26 GVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGLRGAAPAQSPAAPDPEASPLAEPPQE 85 G+H R PLG GG G G G G +++ AP+ AA LA P Sbjct: 609 GLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAAS------LAPPRPA 662 Query: 86 QSLAPWSPQTPAPP 99 + + SP +PAPP Sbjct: 663 SATSAGSPTSPAPP 676 >gi|239742954 PREDICTED: hypothetical protein XP_002342704 [Homo sapiens] Length = 192 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 2/97 (2%) Query: 6 SAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGLRGAAP 65 S TA+ A A++ R R G W G G L GG GAAP Sbjct: 45 SPETAKGAVYASFAAAAKRMSARGRLRTRGGGERWAAGRGSWLQRLSQHGRRGG--GAAP 102 Query: 66 AQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSR 102 P P P S SPQ+ APP R Sbjct: 103 TNKPRGPAPRPSFHRPGGHASQCGLASPQSTAPPARR 139 >gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] Length = 837 Score = 34.7 bits (78), Expect = 0.14 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 26 GVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGLRGAAPAQSPAAPDPEASPLAEPPQE 85 G+H R PLG GG G G G G +++ AP+ AA LA P Sbjct: 609 GLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAAS------LAPPRPA 662 Query: 86 QSLAPWSPQTPAPP 99 + + SP +PAPP Sbjct: 663 SATSAGSPTSPAPP 676 >gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo sapiens] Length = 963 Score = 34.7 bits (78), Expect = 0.14 Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 14/58 (24%) Query: 42 GGLGLGLGLALGVKLAGGLRGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 GG G G G A G G RG+ AQSP P PPQ+Q P PQ P PP Sbjct: 5 GGAGGGPGGAGG---GSGQRGSGVAQSPQQP---------PPQQQQQQP--PQQPTPP 48 >gi|148276998 zinc finger protein 628 [Homo sapiens] Length = 1055 Score = 34.7 bits (78), Expect = 0.14 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 48 LGLALGVKLAGGLRGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPP 99 L L +++AGG AP+ PAAP+ + L + Q L P S Q P PP Sbjct: 680 LQATLSLEVAGGT-AQAPSLGPAAPNSQTFLLVQTAQGLQLIPSSVQPPTPP 730 Score = 32.0 bits (71), Expect = 0.92 Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 20/132 (15%) Query: 10 ARAAAPGGLASSCGRRGVHQRAGLP--PLGHGWVGGLGLGLGLALGV--KLAGGLRGAAP 65 A A APG CG+ AGL HG GG G G +LA L Sbjct: 345 AAAPAPGFACLPCGK-SFRTVAGLSRHQHSHGAAGGQAFRCGSCDGSFPQLASLLAHQQC 403 Query: 66 AQSPAA---PDPEASPLAEPPQEQSLAPWSPQTPAPP-----------CSRCFARAIESS 111 AA P P+A ++ LAP +P P PP C+ C ++ + S Sbjct: 404 HVEEAAAGRPPPQAEAAEVTCPQEPLAPAAPVPPPPPSAPASAERPYKCAEC-GKSFKGS 462 Query: 112 RDLLHRIKDEVG 123 L + ++D G Sbjct: 463 SGLRYHLRDHTG 474 >gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo sapiens] Length = 434 Score = 34.7 bits (78), Expect = 0.14 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 9/96 (9%) Query: 198 EKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALKMMKENVAFEQEKEGKSN 257 +K+ E +VSV+ R H S R ++ K+ + + +++ + + KEG+ + Sbjct: 21 DKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEG-------RKHRSRSRSKEGRRH 73 Query: 258 EKNDFT--KFKTEQENEAKCRNSKPGKKKNDFEQGE 291 E D + K K+E+ N+ + + K ++ N E GE Sbjct: 74 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGE 109 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.134 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,603,135 Number of Sequences: 37866 Number of extensions: 806846 Number of successful extensions: 7095 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 285 Number of HSP's that attempted gapping in prelim test: 6118 Number of HSP's gapped (non-prelim): 1150 length of query: 373 length of database: 18,247,518 effective HSP length: 104 effective length of query: 269 effective length of database: 14,309,454 effective search space: 3849243126 effective search space used: 3849243126 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.