Search of human proteins with 25952147

Search of human proteins with 25952147

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|25952147 tumor necrosis factor ligand superfamily, member 14
isoform 2 [Homo sapiens]
         (204 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25952147 tumor necrosis factor ligand superfamily, member 14 ...   414   e-116
gi|25952144 tumor necrosis factor ligand superfamily, member 14 ...   395   e-110
gi|4557329 fas ligand [Homo sapiens]                                   81   5e-16
gi|23510445 tumor necrosis factor (ligand) superfamily, member 1...    72   4e-13
gi|25952111 tumor necrosis factor alpha [Homo sapiens]                 67   1e-11
gi|4505035 lymphotoxin-beta isoform a [Homo sapiens]                   57   8e-09
gi|4507593 tumor necrosis factor (ligand) superfamily, member 10...    55   4e-08
gi|14790152 tumor necrosis factor ligand superfamily, member 11 ...    48   5e-06
gi|4507595 tumor necrosis factor ligand superfamily, member 11 i...    48   5e-06
gi|6806893 lymphotoxin alpha precursor [Homo sapiens]                  46   3e-05
gi|229092381 lymphotoxin alpha precursor [Homo sapiens]                46   3e-05
gi|4507609 tumor necrosis factor (ligand) superfamily, member 9 ...    43   2e-04
gi|4557433 CD40 ligand [Homo sapiens]                                  33   0.22 
gi|194363768 homeobox D9 [Homo sapiens]                                29   2.4  
gi|91208420 bassoon protein [Homo sapiens]                             29   2.4  
gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo ...    28   4.1  
gi|253795514 choline phosphate cytidylyltransferase 1 beta isofo...    28   5.4  
gi|21361202 choline phosphate cytidylyltransferase 1 beta isofor...    28   5.4  
gi|13259552 interferon, alpha-inducible protein 6 isoform a [Hom...    28   5.4  
gi|4507597 tumor necrosis factor (ligand) superfamily, member 12...    28   7.1  
gi|13259550 interferon, alpha-inducible protein 6 isoform c [Hom...    28   7.1  
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]            28   7.1  
gi|10864043 kidney and liver proline oxidase 1 [Homo sapiens]          28   7.1  
gi|4507607 tumor necrosis factor (ligand) superfamily, member 8 ...    27   9.2  
gi|13259548 interferon, alpha-inducible protein 6 isoform b [Hom...    27   9.2  
gi|6005948 WW domain-containing binding protein 4 [Homo sapiens]       27   9.2  

>gi|25952147 tumor necrosis factor ligand superfamily, member 14
           isoform 2 [Homo sapiens]
          Length = 204

 Score =  414 bits (1065), Expect = e-116
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARDGPAGSWEQLIQERRSHEVNPAA 60
           MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARDGPAGSWEQLIQERRSHEVNPAA
Sbjct: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARDGPAGSWEQLIQERRSHEVNPAA 60

Query: 61  HLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPL 120
           HLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPL
Sbjct: 61  HLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPL 120

Query: 121 GLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVV 180
           GLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVV
Sbjct: 121 GLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVV 180

Query: 181 VRVLDERLVRLRDGTRSYFGAFMV 204
           VRVLDERLVRLRDGTRSYFGAFMV
Sbjct: 181 VRVLDERLVRLRDGTRSYFGAFMV 204


>gi|25952144 tumor necrosis factor ligand superfamily, member 14
           isoform 1 precursor [Homo sapiens]
          Length = 240

 Score =  395 bits (1014), Expect = e-110
 Identities = 203/240 (84%), Positives = 204/240 (85%), Gaps = 36/240 (15%)

Query: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVAR----------------------- 37
           MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVAR                       
Sbjct: 1   MEESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARVGLGLLLLLMGAGLAVQGWFLLQ 60

Query: 38  -------------DGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 84
                        DGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL
Sbjct: 61  LHWRLGEMVTRLPDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGL 120

Query: 85  AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 144
           AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL
Sbjct: 121 AFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELL 180

Query: 145 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
           VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGE+VVVRVLDERLVRLRDGTRSYFGAFMV
Sbjct: 181 VSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEKVVVRVLDERLVRLRDGTRSYFGAFMV 240


>gi|4557329 fas ligand [Homo sapiens]
          Length = 281

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 12/149 (8%)

Query: 55  EVNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLG 114
           E+   AHLTG ++S +    PL WE   G+  L G+ Y  G LV+ + G Y++YSKV   
Sbjct: 142 ELRKVAHLTGKSNSRSM---PLEWEDTYGIVLLSGVKYKKGGLVINETGLYFVYSKVYFR 198

Query: 115 GVGCPLGLASTITHGLYKRTPRYPEELELLVSQ-QSPCGRATSSSRVWWDSSFLGGVVHL 173
           G  C       ++H +Y R  +YP++L ++  +  S C    ++ ++W  SS+LG V +L
Sbjct: 199 GQSCN---NLPLSHKVYMRNSKYPQDLVMMEGKMMSYC----TTGQMWARSSYLGAVFNL 251

Query: 174 EAGEEVVVRVLDERLVRLRDGTRSYFGAF 202
            + + + V V +  LV   + ++++FG +
Sbjct: 252 TSADHLYVNVSELSLVNFEE-SQTFFGLY 279


>gi|23510445 tumor necrosis factor (ligand) superfamily, member 15
           [Homo sapiens]
          Length = 251

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 20/179 (11%)

Query: 41  AGSWEQLIQERRSHEVNPAAHLTGANSSLT----GSGGPLLWETQLGLAFLRG-LSYHDG 95
           A S +Q+    R+    P AHLT    + T         L WE +LGLAF +  ++Y + 
Sbjct: 78  APSHQQVYAPLRADGDKPRAHLTVVRQTPTQHFKNQFPALHWEHELGLAFTKNRMNYTNK 137

Query: 96  ALVVTKAGYYYIYSKVQLGGV----------GCPLGLASTITHGLYKRTPRYPEELELLV 145
            L++ ++G Y+IYS+V   G+          G P     +IT  + K T  YPE  +LL+
Sbjct: 138 FLLIPESGDYFIYSQVTFRGMTSECSEIRQAGRP-NKPDSITVVITKVTDSYPEPTQLLM 196

Query: 146 SQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
             +S C   ++    W+   +LG +  L+ G++++V V D  LV      +++FGAF++
Sbjct: 197 GTKSVCEVGSN----WFQPIYLGAMFSLQEGDKLMVNVSDISLVDYTKEDKTFFGAFLL 251


>gi|25952111 tumor necrosis factor alpha [Homo sapiens]
          Length = 233

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 52  RSHEVNPAAHLTGANSSLTGSGGPLLWETQLGLAFL-RGLSYHDGALVVTKAGYYYIYSK 110
           R+    P AH+  AN    G    L W  +   A L  G+   D  LVV   G Y IYS+
Sbjct: 82  RTPSDKPVAHVV-ANPQAEGQ---LQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQ 137

Query: 111 VQLGGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRAT---SSSRVWWDSSFL 167
           V   G GCP      +TH + +    Y  ++ LL + +SPC R T   + ++ W++  +L
Sbjct: 138 VLFKGQGCP-STHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYL 196

Query: 168 GGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFG 200
           GGV  LE G+ +   +     +   +  + YFG
Sbjct: 197 GGVFQLEKGDRLSAEINRPDYLDFAESGQVYFG 229


>gi|4505035 lymphotoxin-beta isoform a [Homo sapiens]
          Length = 244

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 55/161 (34%), Positives = 72/161 (44%), Gaps = 19/161 (11%)

Query: 58  PAAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDG-ALVVTKAGYYYIYSKVQLGG 115
           PAAHL GA   L G G  L WET    AFL  G  + D   L + + G YY+Y  V   G
Sbjct: 88  PAAHLIGA--PLKGQG--LGWETTKEQAFLTSGTQFSDAEGLALPQDGLYYLYCLVGYRG 143

Query: 116 V-----GCPLGLASTITHGLYKRTPRY-PEELELLVSQQSPCGRATSSSR------VWWD 163
                 G P G + T+   LY+    Y P   ELL+            +R      +W+ 
Sbjct: 144 RAPPGGGDPQGRSVTLRSSLYRAGGAYGPGTPELLLEGAETVTPVLDPARRQGYGPLWYT 203

Query: 164 SSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
           S   GG+V L  GE V V +    +V    G +++FGA MV
Sbjct: 204 SVGFGGLVQLRRGERVYVNISHPDMVDFARG-KTFFGAVMV 243


>gi|4507593 tumor necrosis factor (ligand) superfamily, member 10
           [Homo sapiens]
          Length = 281

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 22/174 (12%)

Query: 47  LIQERRSHEVNPAAHLTGANSSLTGSGGPLL------------WET-QLGLAFLRGLSYH 93
           L++ER    V  AAH+TG          P              WE+ + G +FL  L   
Sbjct: 113 LVRERGPQRV--AAHITGTRGRSNTLSSPNSKNEKALGRKINSWESSRSGHSFLSNLHLR 170

Query: 94  DGALVVTKAGYYYIYSKVQL---GGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSP 150
           +G LV+ + G+YYIYS+        +         +   +YK T  YP+ + L+ S ++ 
Sbjct: 171 NGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYT-SYPDPILLMKSARNS 229

Query: 151 CGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
           C    +   ++  S + GG+  L+  + + V V +E L+ + D   S+FGAF+V
Sbjct: 230 CWSKDAEYGLY--SIYQGGIFELKENDRIFVSVTNEHLIDM-DHEASFFGAFLV 280


>gi|14790152 tumor necrosis factor ligand superfamily, member 11
           isoform 2 [Homo sapiens]
          Length = 244

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 42  GSWEQLIQERRSHEVNPAAHLT-GANSSLTGSGGPLL--WETQLGLAFLRGLSYHDGALV 98
           GSW  L + R   E  P AHLT  A    +GS    L  W    G A +  +++ +G L+
Sbjct: 76  GSWLDLAK-RSKLEAQPFAHLTINATDIPSGSHKVSLSSWYHDRGWAKISNMTFSNGKLI 134

Query: 99  VTKAGYYYIYSKVQLGGVGCPLGLASTITHGLY---KRTPRYPEELELLVSQQSPCGRAT 155
           V + G+YY+Y+ +          LA+     +    K + + P    L+    +      
Sbjct: 135 VNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGN 194

Query: 156 SSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
           S    +  S  +GG   L +GEE+ + V +  L+   D   +YFGAF V
Sbjct: 195 SEFHFY--SINVGGFFKLRSGEEISIEVSNPSLLD-PDQDATYFGAFKV 240


>gi|4507595 tumor necrosis factor ligand superfamily, member 11
           isoform 1 [Homo sapiens]
          Length = 317

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 10/169 (5%)

Query: 42  GSWEQLIQERRSHEVNPAAHLT-GANSSLTGSGGPLL--WETQLGLAFLRGLSYHDGALV 98
           GSW  L + R   E  P AHLT  A    +GS    L  W    G A +  +++ +G L+
Sbjct: 149 GSWLDLAK-RSKLEAQPFAHLTINATDIPSGSHKVSLSSWYHDRGWAKISNMTFSNGKLI 207

Query: 99  VTKAGYYYIYSKVQLGGVGCPLGLASTITHGLY---KRTPRYPEELELLVSQQSPCGRAT 155
           V + G+YY+Y+ +          LA+     +    K + + P    L+    +      
Sbjct: 208 VNQDGFYYLYANICFRHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGN 267

Query: 156 SSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 204
           S    +  S  +GG   L +GEE+ + V +  L+   D   +YFGAF V
Sbjct: 268 SEFHFY--SINVGGFFKLRSGEEISIEVSNPSLLD-PDQDATYFGAFKV 313


>gi|6806893 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 56  VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDGALVVTKAGYYYIYSKVQLG 114
           + PAAHL G  S        LLW      AFL+ G S  + +L+V  +G Y++YS+V   
Sbjct: 61  LKPAAHLIGDPSKQNS----LLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFS 116

Query: 115 GVGCPLGLAST---ITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVV 171
           G        S+   + H +   + +YP  + LL SQ+            W  S + G   
Sbjct: 117 GKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMV---YPGLQEPWLHSMYHGAAF 173

Query: 172 HLEAGEEVVVRVLDERLVRLRDGTRSYFGAF 202
            L  G+++         + L   T  +FGAF
Sbjct: 174 QLTQGDQLSTHTDGIPHLVLSPST-VFFGAF 203


>gi|229092381 lymphotoxin alpha precursor [Homo sapiens]
          Length = 205

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)

Query: 56  VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLR-GLSYHDGALVVTKAGYYYIYSKVQLG 114
           + PAAHL G  S        LLW      AFL+ G S  + +L+V  +G Y++YS+V   
Sbjct: 61  LKPAAHLIGDPSKQNS----LLWRANTDRAFLQDGFSLSNNSLLVPTSGIYFVYSQVVFS 116

Query: 115 GVGCPLGLAST---ITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVV 171
           G        S+   + H +   + +YP  + LL SQ+            W  S + G   
Sbjct: 117 GKAYSPKATSSPLYLAHEVQLFSSQYPFHVPLLSSQKMV---YPGLQEPWLHSMYHGAAF 173

Query: 172 HLEAGEEVVVRVLDERLVRLRDGTRSYFGAF 202
            L  G+++         + L   T  +FGAF
Sbjct: 174 QLTQGDQLSTHTDGIPHLVLSPST-VFFGAF 203


>gi|4507609 tumor necrosis factor (ligand) superfamily, member 9
           [Homo sapiens]
          Length = 254

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 12/124 (9%)

Query: 74  GPLLWETQLGLAFLR---GLSYHDGA--LVVTKAGYYYIYSKVQLGGV--GCPLGLASTI 126
           GPL W +  GLA +    GLSY +    LVV KAG YY++ +++L  V  G   G  S  
Sbjct: 105 GPLSWYSDPGLAGVSLTGGLSYKEDTKELVVAKAGVYYVFFQLELRRVVAGEGSGSVSLA 164

Query: 127 THGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDE 186
            H    R+      L L V        A +S+       F G ++HL AG+ + V +  E
Sbjct: 165 LHLQPLRSAAGAAALALTVDLPPASSEARNSA-----FGFQGRLLHLSAGQRLGVHLHTE 219

Query: 187 RLVR 190
              R
Sbjct: 220 ARAR 223


>gi|4557433 CD40 ligand [Homo sapiens]
          Length = 261

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 44/160 (27%), Positives = 60/160 (37%), Gaps = 26/160 (16%)

Query: 50  ERRSHEVNP--AAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGA--LVVTKAGYY 105
           E +  + NP  AAH+    SS T S   L W  +        L   +    L V + G Y
Sbjct: 112 EMQKGDQNPQIAAHVISEASSKTTS--VLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLY 169

Query: 106 YIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELLV-------SQQSPCGRATSSS 158
           YIY++V      C    AS+    +     + P   E ++       S   PCG+     
Sbjct: 170 YIYAQVTF----CSNREASSQAPFIASLCLKSPGRFERILLRAANTHSSAKPCGQ----- 220

Query: 159 RVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSY 198
                S  LGGV  L+ G  V V V D   V    G  S+
Sbjct: 221 ----QSIHLGGVFELQPGASVFVNVTDPSQVSHGTGFTSF 256


>gi|194363768 homeobox D9 [Homo sapiens]
          Length = 352

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 3   ESVVRPSVFVVDGQTDIPFTRLGRSHRRQSCSVARD-----GPAGSWEQLIQERRSHEVN 57
           E+   P+       T    T L  S +R  CSVAR+     GP  S    +QE+ +    
Sbjct: 163 ETRAAPAPATAASTTSSSSTSLSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATG 222

Query: 58  PAAHLTGANSSLTGSGG 74
                 G  ++ TG+GG
Sbjct: 223 GTGPGAGIGAA-TGTGG 238


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 14   DGQTDIPFTRLGRSHRRQSCSVARDG-PAGSWEQLIQERRS 53
            DG++    +R  R+ R   CSV  D   +  WEQ ++ RRS
Sbjct: 2591 DGESRYLLSRRRRARRSADCSVQTDDEDSAEWEQPVRRRRS 2631


>gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo
           sapiens]
          Length = 521

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 31  QSCSVARDGPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGPLLWETQLGLAFL-RG 89
           + CS     P  S E     R  HE N A +  G N+ + G   P+  E  L  A + R 
Sbjct: 97  RGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDEIILSTARMNRV 156

Query: 90  LSYHD-GALVVTKAG 103
           LS+H    ++V +AG
Sbjct: 157 LSFHSVSGILVCQAG 171


>gi|253795514 choline phosphate cytidylyltransferase 1 beta isoform
           2 [Homo sapiens]
          Length = 351

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 39  GPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGP 75
           GP G+W+Q+ QER S  +   +      SS T S  P
Sbjct: 276 GPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSP 312


>gi|21361202 choline phosphate cytidylyltransferase 1 beta isoform 1
           [Homo sapiens]
          Length = 369

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 39  GPAGSWEQLIQERRSHEVNPAAHLTGANSSLTGSGGP 75
           GP G+W+Q+ QER S  +   +      SS T S  P
Sbjct: 294 GPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSP 330


>gi|13259552 interferon, alpha-inducible protein 6 isoform a [Homo
           sapiens]
          Length = 130

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 10/109 (9%)

Query: 21  FTRLGRSHRRQSCSVARDGPAGSWEQL----IQERRSHEVNPAAHLTGANSSLTGSGGPL 76
           FT  G    ++ CS + D  +G W+ L    +    +    PA   TGA  +       L
Sbjct: 16  FTCSGVEAGKKKCSESSDSGSGFWKALTFMAVGGGLAVAGLPALGFTGAGIAANSVAASL 75

Query: 77  L-WETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLAS 124
           + W      A L G     G LV T        S V +G +G  +G A+
Sbjct: 76  MSWS-----AILNGGGVPAGGLVATLQSLGAGGSSVVIGNIGALMGYAT 119


>gi|4507597 tumor necrosis factor (ligand) superfamily, member 12
           precursor [Homo sapiens]
          Length = 249

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 23/69 (33%)

Query: 54  HEVNPAAHLTGANSSLTG-----------SGGPLLWETQLGLAFLRGLSYHDGALVVTKA 102
           +EV+P     GA + + G           S  PL +  Q+G              +VT+A
Sbjct: 111 YEVHPRPGQDGAQAGVDGTVSGWEEARINSSSPLRYNRQIG------------EFIVTRA 158

Query: 103 GYYYIYSKV 111
           G YY+Y +V
Sbjct: 159 GLYYLYCQV 167


>gi|13259550 interferon, alpha-inducible protein 6 isoform c [Homo
           sapiens]
          Length = 138

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 25  GRSHRRQSCSVARDGPAGSWEQL----IQERRSHEVNPAAHLTGANSSLTGSGGPLL-WE 79
           G+   ++ CS + D  +G W+ L    +    +    PA   TGA  +       L+ W 
Sbjct: 28  GKDAGKKKCSESSDSGSGFWKALTFMAVGGGLAVAGLPALGFTGAGIAANSVAASLMSWS 87

Query: 80  TQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLAS 124
                A L G     G LV T        S V +G +G  +G A+
Sbjct: 88  -----AILNGGGVPAGGLVATLQSLGAGGSSVVIGNIGALMGYAT 127


>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
          Length = 4523

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 122  LASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVV 181
            +  T+ H + +    Y E+   L     P   A +SS++WW +        LE G E  +
Sbjct: 1715 MQETVRHSITEAIVAYEEKPRELWIFDFPAQVALTSSQIWWTTDVGIAFSRLEEGYETAL 1774

Query: 182  R 182
            +
Sbjct: 1775 K 1775


>gi|10864043 kidney and liver proline oxidase 1 [Homo sapiens]
          Length = 536

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 9/60 (15%)

Query: 138 PEELELLVSQQSP---------CGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERL 188
           PE L      Q P         C +A   SR W   SF GG  HL+   E+   +L  RL
Sbjct: 63  PENLPWCGGSQGPRMLRTCYVLCSQAGPPSRGWQSLSFDGGAFHLKGTGELTRALLVLRL 122


>gi|4507607 tumor necrosis factor (ligand) superfamily, member 8
           [Homo sapiens]
          Length = 234

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 87  LRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCP 119
           L G+ Y DG LV+   G Y+I  ++Q   V CP
Sbjct: 121 LHGVRYQDGNLVIQFPGLYFIICQLQF-LVQCP 152


>gi|13259548 interferon, alpha-inducible protein 6 isoform b [Homo
           sapiens]
          Length = 134

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 25  GRSHRRQSCSVARDGPAGSWEQL----IQERRSHEVNPAAHLTGANSSLTGSGGPLL-WE 79
           G +  ++ CS + D  +G W+ L    +    +    PA   TGA  +       L+ W 
Sbjct: 24  GENAGKKKCSESSDSGSGFWKALTFMAVGGGLAVAGLPALGFTGAGIAANSVAASLMSWS 83

Query: 80  TQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLAS 124
                A L G     G LV T        S V +G +G  +G A+
Sbjct: 84  -----AILNGGGVPAGGLVATLQSLGAGGSSVVIGNIGALMGYAT 123


>gi|6005948 WW domain-containing binding protein 4 [Homo sapiens]
          Length = 376

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 27  SHRRQSCSVARDGPAGSWEQLIQERRSHE 55
           S+  +S ++ +  P G W+++ QE  SHE
Sbjct: 280 SNEEKSKTLKKSNPYGEWQEIKQEVESHE 308


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,170,224
Number of Sequences: 37866
Number of extensions: 364631
Number of successful extensions: 763
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 27
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.