Guide to the Human Genome
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Name: TNFSF14 Sequence: fasta or formatted (204aa) NCBI GI: 25952147
Description:

tumor necrosis factor ligand superfamily, member 14 isoform 2

Referenced in:

TNF and Related Signals

Other entries for this name:
alt prot [240aa] tumor necrosis factor ligand superfamily, member 14 isoform 1 pre...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         12           2
 C cysteine            1.5          3           1
 D aspartate           3.4          7           1
 E glutamate           6.4         13           2
 F phenylalanine       2.9          6           1
 G glycine            11.3         23           2
 H histidine           2.9          6           1
 I isoleucine          2.0          4           1
 K lysine              1.5          3           1
 L leucine            11.3         23           2
 M methionine          1.0          2           1
 N asparagine          1.0          2           1
 P proline             4.4          9           1
 Q glutamine           3.9          8           2
 R arginine            8.8         18           2
 S serine             10.3         21           3
 T threonine           5.4         11           1
 V valine             10.3         21           3
 W tryptophan          2.0          4           2
 Y tyrosine            3.9          8           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor ligand superfamily, member 14 ... 
TNFSF14               0.951   tumor necrosis factor ligand superfamily, member 14 ...
FASLG                 0.144   fas ligand 
TNFSF15               0.121   tumor necrosis factor (ligand) superfamily, member 1...
TNF                   0.108   tumor necrosis factor alpha 
LTB                   0.082   lymphotoxin-beta isoform a 
TNFSF10               0.077   tumor necrosis factor (ligand) superfamily, member 10...
TNFSF11               0.059   tumor necrosis factor ligand superfamily, member 11 ...
TNFSF11               0.059   tumor necrosis factor ligand superfamily, member 11 i...
LTA                   0.054   lymphotoxin alpha precursor 
LTA                   0.054   lymphotoxin alpha precursor 
TNFSF9                0.046   tumor necrosis factor (ligand) superfamily, member 9 ...
CD40LG                0.021   CD40 ligand 
HOXD9                 0.010   homeobox D9 
BSN                   0.010   bassoon protein 
D2HGDH                0.008   D-2-hydroxyglutarate dehydrogenase precursor 
PCYT1B                0.008   choline phosphate cytidylyltransferase 1 beta isofo...
PCYT1B                0.008   choline phosphate cytidylyltransferase 1 beta isofor...
IFI6                  0.008   interferon, alpha-inducible protein 6 isoform a [Hom...
TNFSF12               0.008   tumor necrosis factor (ligand) superfamily, member 12...
IFI6                  0.008   interferon, alpha-inducible protein 6 isoform c [Hom...
DNAH11                0.008   dynein, axonemal, heavy chain 11 
PRODH2                0.008   kidney and liver proline oxidase 1 
TNFSF8                0.005   tumor necrosis factor (ligand) superfamily, member 8 ...
IFI6                  0.005   interferon, alpha-inducible protein 6 isoform b [Hom...
WBP4                  0.005   WW domain-containing binding protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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