Guide to the Human Genome
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Name: METT10D Sequence: fasta or formatted (562aa) NCBI GI: 122114654
Description:

methyltransferase 10 domain containing

Referenced in:

RNA Editing and Other RNA Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         34           3
 C cysteine            2.5         14           1
 D aspartate           4.4         25           2
 E glutamate           9.3         52           2
 F phenylalanine       3.0         17           2
 G glycine             5.7         32           2
 H histidine           1.4          8           1
 I isoleucine          4.8         27           2
 K lysine              7.3         41           2
 L leucine            10.0         56           2
 M methionine          2.0         11           1
 N asparagine          4.3         24           2
 P proline             6.6         37           3
 Q glutamine           4.3         24           1
 R arginine            6.9         39           2
 S serine              6.4         36           2
 T threonine           4.3         24           2
 V valine              7.1         40           3
 W tryptophan          1.4          8           1
 Y tyrosine            2.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methyltransferase 10 domain containing 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FAM9A                 0.013   family with sequence similarity 9, member A 
MYST4                 0.013   MYST histone acetyltransferase (monocytic leukemia)...
C14orf174             0.013   hypothetical protein LOC161394 
NEFM                  0.012   neurofilament, medium polypeptide 150kDa isoform 1 ...
PPP1R12C              0.012   protein phosphatase 1, regulatory subunit 12C 
SYTL1                 0.011   synaptotagmin-like 1 
NEFM                  0.011   neurofilament, medium polypeptide 150kDa isoform 2 ...
SYTL2                 0.010   synaptotagmin-like 2 isoform a 
SYTL2                 0.010   synaptotagmin-like 2 isoform i 
SYTL2                 0.010   synaptotagmin-like 2 isoform g 
SP1                   0.010   Sp1 transcription factor isoform a 
SP1                   0.010   Sp1 transcription factor isoform b 
UMODL1                0.010   uromodulin-like 1 isoform 2 precursor 
SETD1A                0.010   SET domain containing 1A 
SORBS3                0.010   sorbin and SH3 domain containing 3 isoform 1 
KIAA1211              0.010   hypothetical protein LOC57482 
CHD6                  0.010   chromodomain helicase DNA binding protein 6 
PAF1                  0.009   Paf1, RNA polymerase II associated factor, homolog [...
NES                   0.009   nestin 
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
RP1L1                 0.009   retinitis pigmentosa 1-like 1 
TTN                   0.009   titin isoform N2-A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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