Guide to the Human Genome
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Name: IL12B Sequence: fasta or formatted (328aa) NCBI GI: 24497438
Description:

interleukin 12B precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         16           2
 C cysteine            3.4         11           1
 D aspartate           6.4         21           1
 E glutamate           7.3         24           2
 F phenylalanine       3.4         11           2
 G glycine             4.6         15           2
 H histidine           1.8          6           1
 I isoleucine          4.0         13           2
 K lysine              7.9         26           2
 L leucine             7.9         26           4
 M methionine          0.9          3           1
 N asparagine          2.1          7           1
 P proline             4.6         15           2
 Q glutamine           4.0         13           2
 R arginine            3.7         12           1
 S serine             11.3         37           3
 T threonine           7.0         23           2
 V valine              7.9         26           2
 W tryptophan          3.4         11           2
 Y tyrosine            3.7         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 12B precursor 
CNTFR                 0.064   ciliary neurotrophic factor receptor preproprotein [...
CNTFR                 0.064   ciliary neurotrophic factor receptor preproprotein [H...
IL6R                  0.061   interleukin 6 receptor isoform 1 precursor 
IL6R                  0.061   interleukin 6 receptor isoform 2 precursor 
EBI3                  0.040   Epstein-Barr virus induced 3 precursor 
IL11RA                0.038   interleukin 11 receptor, alpha isoform 1 precursor ...
IL11RA                0.038   interleukin 11 receptor, alpha isoform 2 precursor [...
IL11RA                0.038   interleukin 11 receptor, alpha isoform 1 precursor [H...
BTNL2                 0.021   butyrophilin-like 2 
IL23R                 0.017   interleukin 23 receptor precursor 
HMCN2                 0.015   PREDICTED: hemicentin 2 
HMCN2                 0.015   PREDICTED: hemicentin 2 
HMCN2                 0.015   PREDICTED: hemicentin 2 
FCGR2B                0.015   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.015   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR3A                0.015   Fc fragment of IgG, low affinity IIIa, receptor (CD1...
OBSCN                 0.014   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.014   obscurin, cytoskeletal calmodulin and titin-interac...
FCGR3A                0.014   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.014   Fc fragment of IgG, low affinity IIIa, receptor (CD...
IGSF3                 0.014   immunoglobulin superfamily, member 3 isoform 1 [Homo...
IGSF3                 0.014   immunoglobulin superfamily, member 3 isoform 2 [Homo...
ZBTB8B                0.012   zinc finger and BTB domain containing 8B 
FCGR2C                0.012   Fc fragment of IgG, low affinity IIc, receptor [Hom...
FCGR3B                0.012   low affinity immunoglobulin gamma Fc region recepto...
FCGR2B                0.012   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.012   Fc fragment of IgG, low affinity IIb, receptor isofo...
HMCN1                 0.012   hemicentin 1 
KIRREL2               0.012   kin of IRRE-like 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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