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Search of human proteins with 24308448
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens] 582 e-166
gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens] 571 e-163
gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens] 500 e-142
gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens] 489 e-139
gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens] 315 2e-86
gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens] 315 2e-86
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 39 0.004
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 39 0.004
gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 36 0.046
gi|39753953 zinc finger protein 800 [Homo sapiens] 35 0.060
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 34 0.13
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 34 0.17
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 0.17
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 34 0.17
gi|145699123 dedicator of cytokinesis 11 [Homo sapiens] 33 0.23
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 33 0.30
gi|32698688 citron [Homo sapiens] 33 0.39
gi|21264345 peripherin [Homo sapiens] 33 0.39
gi|116235456 ring finger protein 214 [Homo sapiens] 32 0.51
gi|116235451 ring finger protein 214 [Homo sapiens] 32 0.51
gi|134133246 hypothetical protein LOC285753 [Homo sapiens] 32 0.51
gi|28603844 hypothetical protein LOC285753 [Homo sapiens] 32 0.51
gi|34878777 ring finger protein 20 [Homo sapiens] 32 0.66
gi|110815815 centlein isoform 1 [Homo sapiens] 32 0.86
gi|167555106 centlein isoform 2 [Homo sapiens] 32 0.86
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur... 31 1.5
gi|4505579 furin preproprotein [Homo sapiens] 30 1.9
gi|197333744 PCTAIRE protein kinase 1 isoform 2 [Homo sapiens] 30 1.9
gi|5453860 PCTAIRE protein kinase 1 isoform 1 [Homo sapiens] 30 1.9
gi|42794779 myosin 18A isoform b [Homo sapiens] 30 1.9
>gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
Length = 292
Score = 582 bits (1499), Expect = e-166
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
Query: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
Sbjct: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
Query: 241 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 292
FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR
Sbjct: 241 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 292
>gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]
Length = 309
Score = 571 bits (1471), Expect = e-163
Identities = 292/309 (94%), Positives = 292/309 (94%), Gaps = 17/309 (5%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
Query: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 283
LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 300
Query: 284 KLETHICLR 292
KLETHICLR
Sbjct: 301 KLETHICLR 309
>gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens]
Length = 258
Score = 500 bits (1288), Expect = e-142
Identities = 252/257 (98%), Positives = 254/257 (98%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 180
Query: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
Sbjct: 181 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 240
Query: 241 FKQKKDLRRSKKRALEV 257
FKQKKDLRRSKK ++
Sbjct: 241 FKQKKDLRRSKKSMKQI 257
>gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens]
Length = 275
Score = 489 bits (1260), Expect = e-139
Identities = 252/274 (91%), Positives = 254/274 (92%), Gaps = 17/274 (6%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
Query: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 257
LRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 274
>gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]
Length = 527
Score = 315 bits (808), Expect = 2e-86
Identities = 160/166 (96%), Positives = 160/166 (96%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE P Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166
Score = 191 bits (484), Expect = 9e-49
Identities = 96/114 (84%), Positives = 100/114 (87%)
Query: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
+E E G + TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472
Query: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 257
LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
>gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens]
Length = 561
Score = 315 bits (808), Expect = 2e-86
Identities = 160/166 (96%), Positives = 160/166 (96%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQ 166
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE P Q
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQ 166
Score = 272 bits (695), Expect = 3e-73
Identities = 136/149 (91%), Positives = 138/149 (92%)
Query: 144 EETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 203
+E E G + TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA
Sbjct: 413 DEKETEGSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVA 472
Query: 204 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA 263
LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA
Sbjct: 473 LPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEA 532
Query: 264 IFILYYVREFVSRFPDCRKCKLETHICLR 292
IFILYYVREFVSRFPDCRKCKLETHICLR
Sbjct: 533 IFILYYVREFVSRFPDCRKCKLETHICLR 561
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
K Q LE++K+ +++K N EIG + + Q + + L+ + QD+ + L
Sbjct: 407 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 466
Query: 68 LENEKSKVKEAQDIILQLRKE 88
L+ K +KE +D +L + E
Sbjct: 467 LDLTKDSLKETKDALLNVEGE 487
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
K Q LE++K+ +++K N EIG + + Q + + L+ + QD+ + L
Sbjct: 527 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 586
Query: 68 LENEKSKVKEAQDIILQLRKE 88
L+ K +KE +D +L + E
Sbjct: 587 LDLTKDSLKETKDALLNVEGE 607
>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
Length = 1235
Score = 35.8 bits (81), Expect = 0.046
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 44 CQIITNTSTLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKL 103
C I S +K + ++ ++AL S+V D I +L ++ C+ Y+L +
Sbjct: 1052 CIIPGPISKNIKQPSEKIRIEIIALSLNDSQVT-MDDTIQRL-----FVECRFYSLPAEE 1105
Query: 104 TSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPE 163
T +P Q + + + D N +D+ + L++ E+P + F + + PPE
Sbjct: 1106 TPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPNRSLRFTVVSDPPE 1165
Query: 164 TQQSPHLSLKDI 175
+Q L +DI
Sbjct: 1166 DEQD--LECEDI 1175
>gi|39753953 zinc finger protein 800 [Homo sapiens]
Length = 664
Score = 35.4 bits (80), Expect = 0.060
Identities = 61/309 (19%), Positives = 119/309 (38%), Gaps = 53/309 (17%)
Query: 5 RCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIA-------APCQIITNTSTLLKNY 57
R ++K + +E++KK ++ ++N N + G+ ++ + C+ + + +++
Sbjct: 247 RHIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSCPVCCKSFATKANVRRHF 306
Query: 58 QDNNKMLVLALENEKSKVKEAQDIIL---------QLRKEC------YYLT-CQLYALKG 101
+ ++ L K Q + L + RK+ Y LT C+ K
Sbjct: 307 DEVHRGLRRDSITPDIATKPGQPLFLDSISPKKSFKTRKQKSSSKAEYNLTACKCLLCKR 366
Query: 102 KLTSQQTVEPAQN--QEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEA 159
K +SQ ++ +I SG + + N ++ +E + +E+
Sbjct: 367 KYSSQIMLKRHMQIVHKITLSGTNSKREKGPNNTANSSEIKVKVEPAD--------SVES 418
Query: 160 TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPT 219
+PP SP LK TN S ++ + + +KNK PK ++ ++ T
Sbjct: 419 SPPSITHSPQNELKG-TNHS-----NEKKNTPAAQKNKVKQDSESPKSTSPSAAGGQQKT 472
Query: 220 LASKLRRGDPFTDL-CFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFP 278
KL G F L C L F K++L + +E+ I++ +Y
Sbjct: 473 RKPKLSAGFDFKQLYCKLCKRQFTSKQNLTKH----IELHTDGNNIYVKFY--------- 519
Query: 279 DCRKCKLET 287
C C ET
Sbjct: 520 KCPLCTYET 528
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 34.3 bits (77), Expect = 0.13
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 7 LKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQD--NNKML 64
LK +FQ + K K + ++ E GK + C I N L N D N +
Sbjct: 928 LKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEW-RLKCIAIGNPVHLKCNACDYYTNSVD 986
Query: 65 VLALENEKSKVKEAQDIILQLRKE--------CYYLTCQL-YALKGKLTSQQTVEPAQNQ 115
L L + + A + L+K+ CYY Y K KL Q V ++Q
Sbjct: 987 KLRLHTTNHRHEAALKLYKHLQKQEGAVNPESCYYYCAVCDYTTKVKLNLVQHVRSVKHQ 1046
Query: 116 E--------ICSSGMDPNSDDSSRNLFVKDLPQIPLEETEL 148
+ + G+ P D+ S FVKD P LE L
Sbjct: 1047 QTEGLRKLQLHQQGLAPEEDNLSEIFFVKDCPPNELETASL 1087
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 33.9 bits (76), Expect = 0.17
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 100 KGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEA 159
K +L Q+T EPAQ SG NSDD+ R++ + ++ ++ L + +
Sbjct: 679 KRELQVQKTAEPAQPSSASGSG---NSDDAIRSILQQARREMEAQQAALDPALKQAPLSQ 735
Query: 160 TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASP---AVALP 205
+ LS + VS YP L++S KK A+P A ALP
Sbjct: 736 SDITILTPKLLSTSPMPTVSSYP-----PLAISLKKPSAAPEAGASALP 779
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 33.9 bits (76), Expect = 0.17
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 6 CLKKSFQDSLEDIKKR---MKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN-- 60
CLK +D ++K+ ++ + A I + I I + + +LKNY
Sbjct: 1497 CLKGEMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKD 1556
Query: 61 --NKMLVLAL-------ENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEP 111
+K LV L E + ++VKEA++ IL L + Y + +L K +L
Sbjct: 1557 IEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVK 1616
Query: 112 AQNQEI 117
++ +E+
Sbjct: 1617 SKEEEL 1622
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 91 YLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPG 150
++ C+ Y+L + T +P Q + + + D N +D+ + L++ E+P
Sbjct: 1173 FVECRFYSLPAEETPVSLPKPKSGQWVYYNYSNVIYVDKENNKAKRDILKAILQKQEMPN 1232
Query: 151 QGESFQIEATPPETQQSPHLSLKDI 175
+ F + + PPE +Q L +DI
Sbjct: 1233 RSLRFTVVSDPPEDEQD--LECEDI 1255
>gi|145699123 dedicator of cytokinesis 11 [Homo sapiens]
Length = 2073
Score = 33.5 bits (75), Expect = 0.23
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 14 SLEDIKKRMKE--KRNKNLAEIGKRRSFIAAPC------QIITNTSTLLKNYQDNNKMLV 65
S EDI K + E K K +I + I C IT++ LK ++ N + +
Sbjct: 560 SSEDILKLLSEYKKPEKTKLQIIPGQLNITVECVPVDLSNCITSSYVPLKPFEKNCQNIT 619
Query: 66 LALENEKSKVKEAQDIILQLRKECYYLTCQ-----LYALKGKLTSQQTVEPAQNQEICSS 120
+ E ++ + ++ K CY T +Y L+ K SQ+T A+N +C
Sbjct: 620 V----------EVEEFVPEMTKYCYPFTIYKNHLYVYPLQLKYDSQKTFAKARNIAVCVE 669
Query: 121 GMDPNSDDSS 130
D + D+S
Sbjct: 670 FRDSDESDAS 679
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 33.1 bits (74), Expect = 0.30
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 51 STLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVE 110
S LK N LV L N + K+KE++ + + RK+ L+ + K K+ +T+E
Sbjct: 1217 SEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKI---KTLE 1273
Query: 111 PAQNQEICSSGMDPNSDDSSRNLFV 135
+NQEI DD+++NL V
Sbjct: 1274 --KNQEIL--------DDTAKNLRV 1288
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 32.7 bits (73), Expect = 0.39
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 7 LKKSFQD--SLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKML 64
+KK D +LE++ +R +E+ ++ + ++++ I A I + + + NK+
Sbjct: 732 IKKDLADKETLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLA 791
Query: 65 VLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDP 124
+ + +K +++I +LR++ +YL Q GKL +Q Q ++I
Sbjct: 792 ANSSLFTQRNMKAQEEMISELRQQKFYLETQ----AGKLEAQNRKLEEQLEKI------S 841
Query: 125 NSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQS 167
+ D S +N ++ + L E L + + +++ E Q S
Sbjct: 842 HQDHSDKNRLLE--LETRLREVSLEHEEQKLELKRQLTELQLS 882
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 32 EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLV---LALENEKSKVKEAQDIILQLRKE 88
EI ++ + C +IT+ L ++N L L + + A D I+QLR E
Sbjct: 931 EIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSE 990
Query: 89 CYYLTCQLYALKGKLTSQ-QTVE 110
+L ++ + +LTSQ QT+E
Sbjct: 991 VDHLRREITEREMQLTSQKQTME 1013
>gi|21264345 peripherin [Homo sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 0.39
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEIC 118
N+ + NEK +++E D ++ +L Q AL+G+L+ + EPA+ ++C
Sbjct: 87 NQEFLATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLC 144
>gi|116235456 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 32.3 bits (72), Expect = 0.51
Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 36/296 (12%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNN----KM 63
KK F +D+K +++ L E G+R + ++ + +N + K
Sbjct: 297 KKEFLQKEQDLKAEIEK-----LCEKGRREVWEMELDRLKNQDGEINRNIMEETERAWKA 351
Query: 64 LVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSG-- 121
+L+LE+ K ++L+L + L LK + +TV Q E +G
Sbjct: 352 EILSLESRKEL------LVLKLEEAEKEAELHLTYLKSTPPTLETVRSKQEWETRLNGVR 405
Query: 122 -MDPNSDDSSRNLF--------VKDLPQIPLEETELPGQGESFQIEATPPETQQSPHL-- 170
M N D + + LPQIP P F ++ P +P +
Sbjct: 406 IMKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPF 465
Query: 171 SLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPF 230
S+ +T + P R LS P N A + P S P L S + P
Sbjct: 466 SIGQVTMPMVMPSADPRSLSF-PILNPALSQPSQPSSPLPGSHGRNSPGLGSLVSPHGPH 524
Query: 231 TDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVRE-FVSRFPDCRKCKL 285
P +A +P + + L + E ++RFP C K ++
Sbjct: 525 M------PPAASIPPPPGLGGVKASAETPRPQPVDKLEKILEKLLTRFPQCNKAQM 574
>gi|116235451 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 32.3 bits (72), Expect = 0.51
Identities = 62/296 (20%), Positives = 104/296 (35%), Gaps = 36/296 (12%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNN----KM 63
KK F +D+K +++ L E G+R + ++ + +N + K
Sbjct: 297 KKEFLQKEQDLKAEIEK-----LCEKGRREVWEMELDRLKNQDGEINRNIMEETERAWKA 351
Query: 64 LVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSG-- 121
+L+LE+ K ++L+L + L LK + +TV Q E +G
Sbjct: 352 EILSLESRKEL------LVLKLEEAEKEAELHLTYLKSTPPTLETVRSKQEWETRLNGVR 405
Query: 122 -MDPNSDDSSRNLF--------VKDLPQIPLEETELPGQGESFQIEATPPETQQSPHL-- 170
M N D + + LPQIP P F ++ P +P +
Sbjct: 406 IMKKNVRDQFNSHIQLVRNGAKLSSLPQIPTPTLPPPPSETDFMLQVFQPSPSLAPRMPF 465
Query: 171 SLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPF 230
S+ +T + P R LS P N A + P S P L S + P
Sbjct: 466 SIGQVTMPMVMPSADPRSLSF-PILNPALSQPSQPSSPLPGSHGRNSPGLGSLVSPHGPH 524
Query: 231 TDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVRE-FVSRFPDCRKCKL 285
P +A +P + + L + E ++RFP C K ++
Sbjct: 525 M------PPAASIPPPPGLGGVKASAETPRPQPVDKLEKILEKLLTRFPQCNKAQM 574
>gi|134133246 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.51
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 19 KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
KK ++ + N +NLA E+ K++ I+ + TLL+ + K +VL +E EK+ +
Sbjct: 91 KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150
Query: 76 KEAQDIILQLRKECYYLTCQLYALKGKL 103
E Q QL++E +LYA KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175
>gi|28603844 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.51
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 19 KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
KK ++ + N +NLA E+ K++ I+ + TLL+ + K +VL +E EK+ +
Sbjct: 91 KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150
Query: 76 KEAQDIILQLRKECYYLTCQLYALKGKL 103
E Q QL++E +LYA KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 32.0 bits (71), Expect = 0.66
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 3 KERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNK 62
+ER +K + + +K+ KE+ + E GK +II LK Q++ K
Sbjct: 582 REREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQK 641
Query: 63 MLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEI 117
+ L L+ +S KE +D + QL +L L+ +L + E +N+++
Sbjct: 642 EMKLLLDMYRSAPKEQRDKV-QLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKM 695
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 31.6 bits (70), Expect = 0.86
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
L+K F+D ++IK + KE++N KNL E K+ ++ C + N L+
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267
Query: 58 QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
+ + L EK +K+K +D +++ RKE + AL +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315
>gi|167555106 centlein isoform 2 [Homo sapiens]
Length = 391
Score = 31.6 bits (70), Expect = 0.86
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
L+K F+D ++IK + KE++N KNL E K+ ++ C + N L+
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267
Query: 58 QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
+ + L EK +K+K +D +++ RKE + AL +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315
>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) [Homo sapiens]
Length = 1225
Score = 30.8 bits (68), Expect = 1.5
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 88 ECYYLTCQLYALKGKLTSQQTVEPAQNQEICS----SGMDPNSDDSSRNLFVKDLPQIPL 143
EC + KG+ TS++ AQN I + S P D + + +PQ P
Sbjct: 1091 ECTGSNATYHGAKGEHTSRKDAMTAQNTGISTLYRNSYGAPAEDIKHNQVSAQPVPQEPS 1150
Query: 144 E---ETELPGQG------ESF---QIEATPPETQQSPHLSLKDITN 177
ET P Q ESF Q+ PP ++ + HL LK N
Sbjct: 1151 RKDYETYQPFQNSTRNYDESFFEDQVHHRPPASEYTMHLGLKSTGN 1196
>gi|4505579 furin preproprotein [Homo sapiens]
Length = 794
Score = 30.4 bits (67), Expect = 1.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 81 IILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKD 137
++LQLR + ++Y + L S + + P QE C S + + R F+KD
Sbjct: 734 LVLQLRSGFSFRGVKVYTMDRGLISYKGLPPEAWQEECPSDSEEDEGRGERTAFIKD 790
>gi|197333744 PCTAIRE protein kinase 1 isoform 2 [Homo sapiens]
Length = 502
Score = 30.4 bits (67), Expect = 1.9
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 139 PQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKA 198
P+I E+ ++ GES Q AT + QSP V++R + P+K
Sbjct: 73 PEIVHEDLKMGSDGESDQASATSSDEVQSP---------------VRVRMRNHPPRKIS- 116
Query: 199 SPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVS 258
T +N K +L + +R + + + LNSPIF + R + E+
Sbjct: 117 -----------TEDIN-KRLSLPADIRLPEGYLEKLTLNSPIFDKPLSRRLRRVSLSEIG 164
Query: 259 PAKEAIFI 266
K +I
Sbjct: 165 FGKLETYI 172
>gi|5453860 PCTAIRE protein kinase 1 isoform 1 [Homo sapiens]
Length = 496
Score = 30.4 bits (67), Expect = 1.9
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 139 PQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKA 198
P+I E+ ++ GES Q AT + QSP V++R + P+K
Sbjct: 67 PEIVHEDLKMGSDGESDQASATSSDEVQSP---------------VRVRMRNHPPRKIS- 110
Query: 199 SPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVS 258
T +N K +L + +R + + + LNSPIF + R + E+
Sbjct: 111 -----------TEDIN-KRLSLPADIRLPEGYLEKLTLNSPIFDKPLSRRLRRVSLSEIG 158
Query: 259 PAKEAIFI 266
K +I
Sbjct: 159 FGKLETYI 166
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 30.4 bits (67), Expect = 1.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 58 QDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQ 107
Q N + L L + ++ +E+Q + QL+K+C LT +L K L QQ
Sbjct: 1401 QQNKRQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQ 1450
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,242,922
Number of Sequences: 37866
Number of extensions: 511071
Number of successful extensions: 1868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1824
Number of HSP's gapped (non-prelim): 102
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.