Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MARS2 Sequence: fasta or formatted (593aa) NCBI GI: 24308436
Description:

methionine-tRNA synthetase 2 precursor

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         46           3
 C cysteine            2.7         16           1
 D aspartate           4.7         28           2
 E glutamate           4.7         28           2
 F phenylalanine       4.6         27           1
 G glycine             7.1         42           2
 H histidine           3.4         20           2
 I isoleucine          2.9         17           2
 K lysine              3.2         19           1
 L leucine            11.6         69           2
 M methionine          0.5          3           1
 N asparagine          2.4         14           1
 P proline             6.7         40           2
 Q glutamine           3.9         23           2
 R arginine            7.1         42           2
 S serine              7.6         45           2
 T threonine           5.7         34           2
 V valine              6.9         41           2
 W tryptophan          2.7         16           2
 Y tyrosine            3.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methionine-tRNA synthetase 2 precursor 
MARS                  0.083   methionyl-tRNA synthetase 
VARS                  0.016   valyl-tRNA synthetase 
LARS                  0.015   leucyl-tRNA synthetase 
VARS2                 0.009   valyl-tRNA synthetase 2, mitochondrial 
IARS2                 0.008   mitochondrial isoleucine tRNA synthetase 
CDCP1                 0.007   CUB domain-containing protein 1 isoform 1 
CDCP1                 0.007   CUB domain-containing protein 1 isoform 2 
CARS2                 0.006   cysteinyl-tRNA synthetase 2, mitochondrial 
MSH6                  0.006   mutS homolog 6 
LARS2                 0.006   leucyl-tRNA synthetase 2, mitochondrial precursor [Ho...
SLC45A3               0.006   prostein 
FOXF2                 0.005   forkhead box F2 
LPIN3                 0.005   lipin 3 
ZSCAN2                0.005   zinc finger protein 29 isoform 2 
IARS                  0.005   isoleucine tRNA synthetase 
IARS                  0.005   isoleucine tRNA synthetase 
ZSCAN2                0.005   zinc finger protein 29 isoform 1 
ZSCAN2                0.005   zinc finger protein 29 isoform 3 
TRIM65                0.004   tripartite motif-containing 65 
FOXF1                 0.004   forkhead box F1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press