Guide to the Human Genome
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Name: SLC45A3 Sequence: fasta or formatted (553aa) NCBI GI: 14916437
Description:

prostein

Referenced in:

Prostate
Skin and Related Tissues
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         59           2
 C cysteine            3.6         20           2
 D aspartate           3.3         18           1
 E glutamate           3.8         21           2
 F phenylalanine       5.1         28           1
 G glycine             9.0         50           2
 H histidine           1.6          9           1
 I isoleucine          2.7         15           1
 K lysine              1.3          7           1
 L leucine            17.2         95           3
 M methionine          2.2         12           1
 N asparagine          0.5          3           1
 P proline             6.7         37           4
 Q glutamine           2.7         15           1
 R arginine            6.0         33           3
 S serine              6.9         38           2
 T threonine           4.7         26           1
 V valine              8.1         45           3
 W tryptophan          1.1          6           1
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostein 
SLC45A2               0.140   membrane-associated transporter protein isoform a [H...
SLC45A2               0.139   membrane-associated transporter protein isoform b [H...
SLC45A4               0.084   solute carrier family 45, member 4 
SLC45A1               0.080   DNB5 
COL10A1               0.012   type X collagen alpha 1 precursor 
PPP1R10               0.008   protein phosphatase 1, regulatory subunit 10 
SHANK1                0.007   SH3 and multiple ankyrin repeat domains 1 
ZFPM1                 0.007   zinc finger protein, multitype 1 
LOC100290504          0.006   PREDICTED: hypothetical protein XP_002346416 
ATN1                  0.006   atrophin-1 
ATN1                  0.006   atrophin-1 
MARS2                 0.006   methionine-tRNA synthetase 2 precursor 
SLC43A1               0.006   solute carrier family 43, member 1 
LPHN2                 0.006   latrophilin 2 precursor 
COL9A3                0.006   alpha 3 type IX collagen 
COL6A2                0.006   alpha 2 type VI collagen isoform 2C2a' precursor [H...
COL6A2                0.006   alpha 2 type VI collagen isoform 2C2a precursor [Ho...
COL6A2                0.006   alpha 2 type VI collagen isoform 2C2 precursor [Hom...
ARHGEF18              0.006   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.006   Rho/Rac guanine nucleotide exchange factor 18 isofor...
LOC100293375          0.005   PREDICTED: hypothetical protein 
LOC100289085          0.005   PREDICTED: hypothetical protein XP_002343916 
LOC100288738          0.005   PREDICTED: hypothetical protein XP_002343788 
KLRG2                 0.005   killer cell lectin-like receptor subfamily G, member...
PRR14                 0.005   proline rich 14 
COL3A1                0.005   collagen type III alpha 1 preproprotein 
DOK7                  0.005   downstream of tyrosine kinase 7 
C10orf134             0.005   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             0.005   PREDICTED: chromosome 10 open reading frame 134 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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