Guide to the Human Genome
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Name: LENG8 Sequence: fasta or formatted (800aa) NCBI GI: 24308382
Description:

leukocyte receptor cluster member 8

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         80           2
 C cysteine            1.9         15           1
 D aspartate           3.9         31           2
 E glutamate           5.8         46           2
 F phenylalanine       2.8         22           2
 G glycine             8.4         67           3
 H histidine           2.9         23           1
 I isoleucine          1.6         13           1
 K lysine              5.4         43           3
 L leucine             6.5         52           2
 M methionine          2.4         19           1
 N asparagine          3.2         26           1
 P proline             7.9         63           3
 Q glutamine           6.8         54           4
 R arginine            7.0         56           2
 S serine              9.9         79           5
 T threonine           5.0         40           2
 V valine              3.2         26           1
 W tryptophan          1.2         10           1
 Y tyrosine            4.4         35           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leukocyte receptor cluster member 8 
ARID1A                0.023   AT rich interactive domain 1A isoform a 
ARID1A                0.023   AT rich interactive domain 1A isoform b 
SRRM2                 0.021   splicing coactivator subunit SRm300 
YLPM1                 0.021   YLP motif containing 1 
EWSR1                 0.017   Ewing sarcoma breakpoint region 1 isoform 4 
HRNR                  0.017   hornerin 
MCM3AP                0.016   minichromosome maintenance complex component 3 assoc...
EWSR1                 0.015   Ewing sarcoma breakpoint region 1 isoform 2 
PNN                   0.014   pinin, desmosome associated protein 
TSC22D1               0.014   TSC22 domain family, member 1 isoform 1 
FLJ37078              0.014   hypothetical protein LOC222183 
EWSR1                 0.014   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.014   Ewing sarcoma breakpoint region 1 isoform 1 
WDR33                 0.014   WD repeat domain 33 isoform 1 
SPEN                  0.014   spen homolog, transcriptional regulator 
TFG                   0.014   TRK-fused 
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
TFG                   0.014   TRK-fused 
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
PRB1                  0.014   proline-rich protein BstNI subfamily 1 isoform 1 pre...
ATN1                  0.014   atrophin-1 
ATN1                  0.014   atrophin-1 
PRB2                  0.014   proline-rich protein BstNI subfamily 2 
TNRC18                0.013   trinucleotide repeat containing 18 
SFRS16                0.013   splicing factor, arginine/serine-rich 16 
FLG2                  0.012   filaggrin family member 2 
FOXJ2                 0.012   forkhead box J2 
CCNK                  0.012   cyclin K isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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