Guide to the Human Genome
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Name: LMF2 Sequence: fasta or formatted (682aa) NCBI GI: 24308356
Description:

lipase maturation factor 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         62           2
 C cysteine            0.9          6           1
 D aspartate           1.5         10           2
 E glutamate           4.1         28           2
 F phenylalanine       4.3         29           2
 G glycine             6.6         45           2
 H histidine           3.2         22           2
 I isoleucine          1.8         12           3
 K lysine              2.6         18           2
 L leucine            16.6        113           3
 M methionine          1.0          7           1
 N asparagine          1.0          7           1
 P proline             7.6         52           3
 Q glutamine           5.6         38           2
 R arginine            6.7         46           2
 S serine              6.6         45           4
 T threonine           6.7         46           2
 V valine              6.7         46           3
 W tryptophan          4.4         30           2
 Y tyrosine            2.9         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lipase maturation factor 2 
LMF1                  0.091   lipase maturation factor 1 
RHBDD3                0.007   rhomboid domain containing 3 
LOC400553             0.006   PREDICTED: FLJ44904 protein 
SALL3                 0.005   sal-like 3 
MAP3K1                0.005   mitogen-activated protein kinase kinase kinase 1 [H...
SALL2                 0.004   sal-like 2 
FASN                  0.004   fatty acid synthase 
LOC100288496          0.004   PREDICTED: hypothetical protein XP_002342747 
BCL6B                 0.004   B-cell CLL/lymphoma 6, member B (zinc finger protein...
XKR8                  0.004   XK, Kell blood group complex subunit-related family,...
LOC100293967          0.004   PREDICTED: hypothetical protein 
LOC100291009          0.004   PREDICTED: hypothetical protein XP_002347838 
LOC100288940          0.004   PREDICTED: hypothetical protein XP_002343615 
LOC100293596          0.004   PREDICTED: similar to mucin 
LOC100134702          0.004   PREDICTED: similar to mucin 
LATS2                 0.004   LATS, large tumor suppressor, homolog 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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