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Search of human proteins with 24308107
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308107 putative MAPK activating protein PM20,PM21 isoform
2 [Homo sapiens]
(133 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308107 putative MAPK activating protein PM20,PM21 isoform 2... 265 1e-71
gi|167736389 putative MAPK activating protein PM20,PM21 isoform ... 239 6e-64
gi|49472835 bridging integrator 2 [Homo sapiens] 37 0.006
gi|40254823 SH2 containing inositol phosphatase isoform b [Homo ... 35 0.018
gi|64085167 SH2 containing inositol phosphatase isoform a [Homo ... 35 0.018
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 35 0.018
gi|226437579 NAC alpha domain containing [Homo sapiens] 35 0.023
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.023
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.023
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.023
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.023
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 35 0.023
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 33 0.051
gi|42476169 Paf1, RNA polymerase II associated factor, homolog [... 33 0.087
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 33 0.087
gi|210032580 SET domain containing 1B [Homo sapiens] 32 0.11
gi|148612857 sickle tail isoform 3 [Homo sapiens] 32 0.19
gi|148612813 sickle tail isoform 2 [Homo sapiens] 32 0.19
gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] 32 0.19
gi|153792780 additional sex combs like 2 [Homo sapiens] 32 0.19
gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo ... 31 0.25
gi|119395716 forkhead box C1 [Homo sapiens] 31 0.25
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 31 0.25
gi|57242766 hypothetical protein LOC168455 [Homo sapiens] 31 0.25
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 31 0.33
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 31 0.33
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 31 0.33
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 31 0.33
gi|45439357 elongin A2 [Homo sapiens] 31 0.33
gi|157502225 Janus kinase and microtubule interacting protein 3 ... 30 0.43
>gi|24308107 putative MAPK activating protein PM20,PM21 isoform 2
[Homo sapiens]
Length = 133
Score = 265 bits (676), Expect = 1e-71
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MRRSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTS 60
MRRSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTS
Sbjct: 1 MRRSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTS 60
Query: 61 RPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQP 120
RPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQP
Sbjct: 61 RPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQP 120
Query: 121 LGPDGSQGFKQRR 133
LGPDGSQGFKQRR
Sbjct: 121 LGPDGSQGFKQRR 133
>gi|167736389 putative MAPK activating protein PM20,PM21 isoform 1
[Homo sapiens]
Length = 152
Score = 239 bits (609), Expect = 6e-64
Identities = 122/132 (92%), Positives = 123/132 (93%)
Query: 2 RRSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSR 61
RR + K Q RKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSR
Sbjct: 21 RRLEKKLKITQKESRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSR 80
Query: 62 PTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPL 121
PTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPL
Sbjct: 81 PTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPL 140
Query: 122 GPDGSQGFKQRR 133
GPDGSQGFKQRR
Sbjct: 141 GPDGSQGFKQRR 152
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 36.6 bits (83), Expect = 0.006
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 10 RRQTAGRKSKSPPKVPIVIQDDSLPA-GPPPQIRILKRPTSNGVVSSPNST--SRPTLPV 66
R +TA S+ P K + + + P+ PPP+ RP+S + SSP ++ PT P
Sbjct: 390 RTRTASEGSEQPKKRASIQRTSAPPSRPPPPRATASPRPSSGNIPSSPTASGGGSPTSPR 449
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQP 120
SL A R + S +P E EKP+ + ++ ++ P + P
Sbjct: 450 ASLG---TGTASPRTSLEVSPNP-EPPEKPVRTPEAKENENIHNQNPEELCTSP 499
>gi|40254823 SH2 containing inositol phosphatase isoform b [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.018
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 11 RQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSN-GVVSSPNSTSRPTLPVKSL 69
R G KS+ PK P+ Q P P R +K S + P T RP LPVKS
Sbjct: 1094 RAAGGDKSQGKPKTPVSSQ------APVPAKRPIKPSRSEINQQTPPTPTPRPPLPVKSP 1147
Query: 70 AQREAEYAEARKRILGSASPEEEQEKP 96
A ++++ R + P + +P
Sbjct: 1148 AVLHLQHSKGRDYRDNTELPHHGKHRP 1174
>gi|64085167 SH2 containing inositol phosphatase isoform a [Homo
sapiens]
Length = 1189
Score = 35.0 bits (79), Expect = 0.018
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 11 RQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSN-GVVSSPNSTSRPTLPVKSL 69
R G KS+ PK P+ Q P P R +K S + P T RP LPVKS
Sbjct: 1095 RAAGGDKSQGKPKTPVSSQ------APVPAKRPIKPSRSEINQQTPPTPTPRPPLPVKSP 1148
Query: 70 AQREAEYAEARKRILGSASPEEEQEKP 96
A ++++ R + P + +P
Sbjct: 1149 AVLHLQHSKGRDYRDNTELPHHGKHRP 1175
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 35.0 bits (79), Expect = 0.018
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 6 RAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLP 65
RA +++A S +P P PA P + + PT V++SP + + P P
Sbjct: 532 RASNEKESAAPASPAPSPAP-----SPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTP 586
Query: 66 VKSLA----QREAE--YAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQ 112
K +A + EA AE R++ EE++ + +R R+ + + +R+
Sbjct: 587 SKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLARE 639
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 34.7 bits (78), Expect = 0.023
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 7 AGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPV 66
A + R +G+ + P V + SL + P + + G +P TS PT
Sbjct: 1123 AREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSS-LDRGCPDAPAPTSAPT--- 1178
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED--SRQPNNVIRQPLGPD 124
++ + +LG S E+ E P + + PE+ QP+ + +PLGPD
Sbjct: 1179 ----------SQQPEPVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPD 1228
Query: 125 GS 126
S
Sbjct: 1229 PS 1230
Score = 26.9 bits (58), Expect = 4.8
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRP 62
R+ R R Q G S PP D S+P+ PP P S+P T+
Sbjct: 133 RAARTALRDQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPP------STPTKTTYA 186
Query: 63 TLPV--KSLAQREAEYAEARKRILGS--ASP 89
LP R++E AE R +L S ASP
Sbjct: 187 LLPACGPHGDARDSE-AELRDELLDSPPASP 216
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 34.7 bits (78), Expect = 0.023
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 7 AGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPV 66
A + R +G+ + P V + SL + P + + G +P TS PT
Sbjct: 1083 AREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSS-LDRGCPDAPAPTSAPT--- 1138
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED--SRQPNNVIRQPLGPD 124
++ + +LG S E+ E P + + PE+ QP+ + +PLGPD
Sbjct: 1139 ----------SQQPEPVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPD 1188
Query: 125 GS 126
S
Sbjct: 1189 PS 1190
Score = 26.9 bits (58), Expect = 4.8
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRP 62
R+ R R Q G S PP D S+P+ PP P S+P T+
Sbjct: 133 RAARTALRDQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPP------STPTKTTYA 186
Query: 63 TLPV--KSLAQREAEYAEARKRILGS--ASP 89
LP R++E AE R +L S ASP
Sbjct: 187 LLPACGPHGDARDSE-AELRDELLDSPPASP 216
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 34.7 bits (78), Expect = 0.023
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 7 AGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPV 66
A + R +G+ + P V + SL + P + + G +P TS PT
Sbjct: 1083 AREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSS-LDRGCPDAPAPTSAPT--- 1138
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED--SRQPNNVIRQPLGPD 124
++ + +LG S E+ E P + + PE+ QP+ + +PLGPD
Sbjct: 1139 ----------SQQPEPVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPD 1188
Query: 125 GS 126
S
Sbjct: 1189 PS 1190
Score = 26.9 bits (58), Expect = 4.8
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRP 62
R+ R R Q G S PP D S+P+ PP P S+P T+
Sbjct: 133 RAARTALRDQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPP------STPTKTTYA 186
Query: 63 TLPV--KSLAQREAEYAEARKRILGS--ASP 89
LP R++E AE R +L S ASP
Sbjct: 187 LLPACGPHGDARDSE-AELRDELLDSPPASP 216
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 34.7 bits (78), Expect = 0.023
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 7 AGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPV 66
A + R +G+ + P V + SL + P + + G +P TS PT
Sbjct: 1123 AREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSS-LDRGCPDAPAPTSAPT--- 1178
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED--SRQPNNVIRQPLGPD 124
++ + +LG S E+ E P + + PE+ QP+ + +PLGPD
Sbjct: 1179 ----------SQQPEPVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPD 1228
Query: 125 GS 126
S
Sbjct: 1229 PS 1230
Score = 26.9 bits (58), Expect = 4.8
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRP 62
R+ R R Q G S PP D S+P+ PP P S+P T+
Sbjct: 133 RAARTALRDQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPP------STPTKTTYA 186
Query: 63 TLPV--KSLAQREAEYAEARKRILGS--ASP 89
LP R++E AE R +L S ASP
Sbjct: 187 LLPACGPHGDARDSE-AELRDELLDSPPASP 216
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 34.7 bits (78), Expect = 0.023
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 7 AGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPV 66
A + R +G+ + P V + SL + P + + G +P TS PT
Sbjct: 1083 AREERGLSGKSTPEPTLPSAVATEASLDSCPESSVGAVSS-LDRGCPDAPAPTSAPT--- 1138
Query: 67 KSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED--SRQPNNVIRQPLGPD 124
++ + +LG S E+ E P + + PE+ QP+ + +PLGPD
Sbjct: 1139 ----------SQQPEPVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPD 1188
Query: 125 GS 126
S
Sbjct: 1189 PS 1190
Score = 26.9 bits (58), Expect = 4.8
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRP 62
R+ R R Q G S PP D S+P+ PP P S+P T+
Sbjct: 133 RAARTALRDQEGGHASPDPPPELCSQGDLSVPSPPPDPDSFFTPP------STPTKTTYA 186
Query: 63 TLPV--KSLAQREAEYAEARKRILGS--ASP 89
LP R++E AE R +L S ASP
Sbjct: 187 LLPACGPHGDARDSE-AELRDELLDSPPASP 216
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 34.7 bits (78), Expect = 0.023
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 25/132 (18%)
Query: 1 MRRSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKR-----PTSNGVVSS 55
+RR + A R++ A PP + + + LPAGP +L++ P +G
Sbjct: 771 LRREINA-LRQKLAQPPPPQPPSLNKTVSNGELPAGPQGDAAVLEQALQEEPEDDGDRDD 829
Query: 56 ----PNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDR--PTRISQPED 109
P T PT P SL+++E + PE KPI D P+R +P
Sbjct: 830 SKLPPPPTLEPTGPAPSLSEQE-------------SPPEPPTLKPINDSKPPSRFLKPRK 876
Query: 110 SRQPNNVIRQPL 121
+ + + PL
Sbjct: 877 VEEDELLEKSPL 888
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 33.5 bits (75), Expect = 0.051
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 33 LPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEE 92
LPAG PP+ +R T + + N S + + E + +E ++ G S + E
Sbjct: 243 LPAGCPPETSKARRDTQSNELIEINPQSEGKVYTRCFCLEEPQNSEVDAQLTGRISQKAE 302
Query: 93 ------QEKPILDRPTRISQPEDSRQPNNVIRQPLGPDGSQG 128
QE + P + DS NV P GP G +G
Sbjct: 303 RGAKVHQETAADECPPCVHGARDS----NVTLAPSGPKGGKG 340
>gi|42476169 Paf1, RNA polymerase II associated factor, homolog
[Homo sapiens]
Length = 531
Score = 32.7 bits (73), Expect = 0.087
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 40 QIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILD 99
++R+ KR GV S N+ + + + ++E E EARK L + PEEE+E+ +
Sbjct: 329 RVRLSKRRAKAGVQSGTNALL--VVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMET 386
Query: 100 RPTRISQPEDSRQPNNVIRQPLGPDGSQGFKQRR 133
++ ++ + + D G + R
Sbjct: 387 EEKEAGGSDEEQEKGSSSEKEGSEDEHSGSESER 420
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 32.7 bits (73), Expect = 0.087
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 21 PPKVPIVIQDDSLPAGPPPQIRILKRP---TSNGVVSSPNSTSRPTLPVKSLAQREAEYA 77
PP+ P IQ S+P PP Q K P T+ T +P PV ++ A
Sbjct: 1064 PPQPPAPIQPQSVP--PPIQPEAEKFPSTETATLAQKPSQDTEKPLEPVSTVQVEPAVKT 1121
Query: 78 EARKRILGSASPEEEQEKPILDRPTRISQPEDSRQP 113
++ + EE+Q + ++ + I +P +P
Sbjct: 1122 VNQQTMAAPVVKEEKQPEKVISKDLVIERPRPDSRP 1157
Score = 26.6 bits (57), Expect = 6.3
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Query: 9 KRRQTAGRKSKSPPKVPIVIQD-----DSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPT 63
+R++ G K++ + +V + D P PPPQ +P S P + P+
Sbjct: 1030 QRKEKEGEKAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS 1089
Query: 64 LPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPL 121
+LAQ+ ++ E + S E K + + ++ +QP VI + L
Sbjct: 1090 TETATLAQKPSQDTEKPLEPV-STVQVEPAVKTVNQQTMAAPVVKEEKQPEKVISKDL 1146
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.3 bits (72), Expect = 0.11
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 20/124 (16%)
Query: 21 PPKVPIVIQDDSLPAGPPP----QIRILKRPT---------SNGVVSSPNSTSRPTLPVK 67
PP P+ + P GPPP + + RPT S G + +S + P P
Sbjct: 438 PPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTPTLESSPAGPEKPHD 497
Query: 68 SLAQR-EAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGPDGS 126
SL R E E R ++L P+ + E + P IS P P G +
Sbjct: 498 SLDSRIEMLLKEQRTKLLFLREPDSDTELQMEGSP--ISSSSSQLSP----LAPFGTNSQ 551
Query: 127 QGFK 130
GF+
Sbjct: 552 PGFR 555
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 31.6 bits (70), Expect = 0.19
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Query: 23 KVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARK- 81
K I + S AGP PQ R K P +S + S P + S E E E K
Sbjct: 1041 KENITAKASSEDAGPSPQTRATKYPAEE--PASAWTPSPPPVTTSSSKDEEEEEEEGDKI 1098
Query: 82 --RILGSASPEEEQEKPI----------LDRPTRISQPEDSRQ 112
+ GS+ + P+ LD+P + S+ +D RQ
Sbjct: 1099 MAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQ 1141
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 31.6 bits (70), Expect = 0.19
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Query: 23 KVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARK- 81
K I + S AGP PQ R K P +S + S P + S E E E K
Sbjct: 996 KENITAKASSEDAGPSPQTRATKYPAEE--PASAWTPSPPPVTTSSSKDEEEEEEEGDKI 1053
Query: 82 --RILGSASPEEEQEKPI----------LDRPTRISQPEDSRQ 112
+ GS+ + P+ LD+P + S+ +D RQ
Sbjct: 1054 MAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQSKLQDPRQ 1096
>gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]
Length = 988
Score = 31.6 bits (70), Expect = 0.19
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 37 PPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKP 96
P PQ + L++ P+ + PT P+K A+ + A+ R A +E +P
Sbjct: 455 PGPQGKALQKRNGTSSGLGPSCSDAPTTPIKQKARFKIRDAKCHLRPHSQARAKETARQP 514
Query: 97 ILD 99
+LD
Sbjct: 515 LLD 517
>gi|153792780 additional sex combs like 2 [Homo sapiens]
Length = 1435
Score = 31.6 bits (70), Expect = 0.19
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 18 SKSPPKVPIVIQDDSLP-AGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEY 76
S S PK P V + P AG PQ +K P + V SP S R + SL Q EA
Sbjct: 524 SPSKPKSPGVEKPIVKPTAGAGPQETNMKEPLATLVDQSPESLKRKS----SLTQEEAPV 579
Query: 77 A-EARKRILGS---ASPEEEQEKPILDRPTRI 104
+ E R R+ + P + +P L+R RI
Sbjct: 580 SWEKRPRVTENRQHQQPFQVSPQPFLNRGDRI 611
>gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo
sapiens]
Length = 918
Score = 31.2 bits (69), Expect = 0.25
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 9 KRRQTAGRKSKSPPKVP----IVIQDDS--------LPAGPPPQIRILKRPTSNGVVSSP 56
+R +++ R S P P IV QD S LPA P P R L RP + P
Sbjct: 826 ERTESSRRPPPSRPIPPAPNCIVSQDFSRPRPPQKALPANPVPGRRSLPRPGGASPLRPP 885
Query: 57 NSTSRPTLPVKSLAQREAEYAEAR 80
+ + + P+ +LA + EY R
Sbjct: 886 GAGPQQSRPLAALAPKFPEYRSQR 909
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 31.2 bits (69), Expect = 0.25
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 19 KSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREA 74
+ PP P D + P PP +RI T NG SP +P P +L A
Sbjct: 199 RQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSP---PQPLSPAAALGSGSA 251
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.2 bits (69), Expect = 0.25
Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 20 SPP--KVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYA 77
SPP + P+ + LP PPP+ L P +S P S P P ++ +
Sbjct: 546 SPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEES-PMSPPPEASRLFPPFE 604
Query: 78 EARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGP 123
E+ S PEE P + PEDS P+ P
Sbjct: 605 ESPL----SPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSP 646
Score = 28.9 bits (63), Expect = 1.3
Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 31 DSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPE 90
+ LPA P P+ L RP +S P S + P +S E + + PE
Sbjct: 472 EELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPL-------SPPE 524
Query: 91 EEQEKPILDRPTRISQPEDSRQPNNVIRQPLGP 123
E P L+ P PE S PL P
Sbjct: 525 ESPPSPALETPLS-PPPEASPLSPPFEESPLSP 556
Score = 27.3 bits (59), Expect = 3.7
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 7/111 (6%)
Query: 14 AGRKSKSPPKVPIVIQDDSLPAGPPPQI-RILKRPTSNGVVSSPNSTSRPTLPVKSLAQR 72
A R S P P+ + P PPP++ R+ P + + P + P +S
Sbjct: 623 ASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSP 682
Query: 73 EAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGP 123
E + S PE+ P + PEDS + PL P
Sbjct: 683 PPEASRL------SPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLP 727
Score = 27.3 bits (59), Expect = 3.7
Identities = 26/118 (22%), Positives = 37/118 (31%), Gaps = 22/118 (18%)
Query: 14 AGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVV-------------------- 53
A R S P P + PA PPP+ ++ P +
Sbjct: 686 ASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSP 745
Query: 54 --SSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED 109
P+ + RP P S E + + A PEE P + P QPE+
Sbjct: 746 RPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEE 803
>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
Length = 235
Score = 31.2 bits (69), Expect = 0.25
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 3 RSLRAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGV--VSSPNSTS 60
R R G R A R+ PP P ++S PA P T + ++P T+
Sbjct: 131 RRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPTLTT 190
Query: 61 RPTLPVKSLAQREAEYAEARKR 82
PT+ V S E A AR+R
Sbjct: 191 FPTIRVGSDVWGERSLAAARRR 212
>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 645
Score = 30.8 bits (68), Expect = 0.33
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 8 GKRRQTAGRKSKSPPKVPIVIQ--DDSLP---AGPPPQIRILKRPTSNGVVSSPNSTSRP 62
G T+GR K + P +Q D+ PP + RP + S PN+ RP
Sbjct: 37 GTMEGTSGRSQKPGHRPPPALQIWDEGRAWRSFSNPPDLFTAYRPQPRHLWSQPNACHRP 96
Query: 63 TL------PVKS----LAQREAEYAEARKRILGSASPEEEQEKPILDRPT 102
PV + A+ EAE + SPE Q KP L++P+
Sbjct: 97 HCSGCSERPVHAGLGRHAEAEAEPFRTALKEWERGSPEPSQLKPSLEKPS 146
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 30.8 bits (68), Expect = 0.33
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 13 TAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQR 72
T G ++KS VP D PQ P+ +P+ST PT P+ +L Q
Sbjct: 417 TLGEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSP----PAPSSTPTPTAPIATLNQP 472
Query: 73 E---AEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGP 123
A + P ++Q + I RPT P +P N + L P
Sbjct: 473 PPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNP 526
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 30.8 bits (68), Expect = 0.33
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 13 TAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQR 72
T G ++KS VP D PQ P+ +P+ST PT P+ +L Q
Sbjct: 359 TLGEETKSASNVPSGKSTDEEEEAQTPQAPRTLGPSP----PAPSSTPTPTAPIATLNQP 414
Query: 73 E---AEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGP 123
A + P ++Q + I RPT P +P N + L P
Sbjct: 415 PPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNP 468
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 30.8 bits (68), Expect = 0.33
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 16/122 (13%)
Query: 6 RAGKRRQTAGRKSKSPPKVPIVIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLP 65
+A KRR++ + P +Q P PP R+L PT+ S P+ P P
Sbjct: 1004 QADKRRRSLPSSYRPAQPSPSAVQT---PPSPPVSPRVLSPPTTKRRTSPPHQPKLPNPP 1060
Query: 66 VKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGPDG 125
+S A A+ ++ P + P P I P P+ ++ +
Sbjct: 1061 PES--------APAQCKV-----PSPPTQHPEASPPFSIPSPSPPMSPSQEHKETRDSED 1107
Query: 126 SQ 127
SQ
Sbjct: 1108 SQ 1109
>gi|45439357 elongin A2 [Homo sapiens]
Length = 753
Score = 30.8 bits (68), Expect = 0.33
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 33 LPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILGSASPEEE 92
LP P ++R++ + ++PN + KS+A+ + + +++ G A PE
Sbjct: 611 LPDAPEQRLRVMTTNIRSARGNNPNGREAKMICFKSVAKTPYDTSRRQEKSAGDADPENG 670
Query: 93 QEKP 96
+ KP
Sbjct: 671 EIKP 674
>gi|157502225 Janus kinase and microtubule interacting protein 3
[Homo sapiens]
Length = 844
Score = 30.4 bits (67), Expect = 0.43
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 66 VKSLAQREAEYAEARKRILGSASPEEEQEKPILDRPTRISQPED 109
++ L R A +E R +L E Q KP+LD+ R+S+ +
Sbjct: 306 IRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNE 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,663,541
Number of Sequences: 37866
Number of extensions: 354322
Number of successful extensions: 1834
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 1688
Number of HSP's gapped (non-prelim): 329
length of query: 133
length of database: 18,247,518
effective HSP length: 91
effective length of query: 42
effective length of database: 14,801,712
effective search space: 621671904
effective search space used: 621671904
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.