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Search of human proteins with 239757007
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757007 PREDICTED: hypothetical protein [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757007 PREDICTED: hypothetical protein [Homo sapiens] 308 1e-84
gi|239751521 PREDICTED: hypothetical protein XP_002347881 [Homo ... 308 1e-84
gi|239746028 PREDICTED: hypothetical protein XP_002344185 [Homo ... 308 1e-84
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 30 0.72
gi|116256471 SNF1-like kinase [Homo sapiens] 29 1.2
gi|158534055 round spermatid basic protein 1-like [Homo sapiens] 29 1.6
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 28 2.1
gi|241982712 TBP-interacting protein isoform 1 [Homo sapiens] 28 2.8
gi|112420977 TBP-interacting protein isoform 2 [Homo sapiens] 28 2.8
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 28 2.8
gi|209954788 activating transcription factor 6 beta isoform b [H... 28 2.8
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 28 2.8
gi|118344450 cell death inducing protein [Homo sapiens] 28 2.8
gi|4557251 ADAM metallopeptidase domain 10 [Homo sapiens] 28 3.6
gi|169179313 PREDICTED: hypothetical protein [Homo sapiens] 28 3.6
gi|169181069 PREDICTED: hypothetical protein [Homo sapiens] 28 3.6
gi|238776840 patatin-like phospholipase domain containing 1 isof... 28 3.6
gi|224589138 patatin-like phospholipase domain containing 1 isof... 28 3.6
gi|224593249 patatin-like phospholipase domain containing 1 isof... 28 3.6
gi|169178065 PREDICTED: hypothetical protein [Homo sapiens] 27 4.7
gi|188536004 zinc finger protein 469 [Homo sapiens] 27 4.7
gi|171543895 ataxin 2 [Homo sapiens] 27 4.7
gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo... 27 4.7
gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo ... 27 6.1
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens] 27 6.1
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens] 27 6.1
gi|224548950 hypothetical protein LOC644844 [Homo sapiens] 27 6.1
gi|7110735 ventral anterior homeobox 2 [Homo sapiens] 27 6.1
gi|122937289 kinesin family member 18B [Homo sapiens] 27 6.1
gi|8394376 syntaxin 18 [Homo sapiens] 27 6.1
>gi|239757007 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 308 bits (788), Expect = 1e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP
Sbjct: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
Query: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS
Sbjct: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
Query: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
FMGNFSKFKEDWRSRNTARNVKVSQKV
Sbjct: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
>gi|239751521 PREDICTED: hypothetical protein XP_002347881 [Homo
sapiens]
Length = 147
Score = 308 bits (788), Expect = 1e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP
Sbjct: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
Query: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS
Sbjct: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
Query: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
FMGNFSKFKEDWRSRNTARNVKVSQKV
Sbjct: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
>gi|239746028 PREDICTED: hypothetical protein XP_002344185 [Homo
sapiens]
Length = 147
Score = 308 bits (788), Expect = 1e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP
Sbjct: 1 MEESVFLVQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQEPSKP 60
Query: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS
Sbjct: 61 CWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
Query: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
FMGNFSKFKEDWRSRNTARNVKVSQKV
Sbjct: 121 FMGNFSKFKEDWRSRNTARNVKVSQKV 147
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 30.0 bits (66), Expect = 0.72
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 13 TEKYKCSKQEEVTDERLKMLEFLEELIGITPSQAIFPNLPGGQ 55
T++ + K+E++TD+ L E L+ +T SQ FPN G Q
Sbjct: 1816 TDESEDEKEEKLTDQSRSKLYDEESLLSLTMSQDGFPNEDGEQ 1858
>gi|116256471 SNF1-like kinase [Homo sapiens]
Length = 783
Score = 29.3 bits (64), Expect = 1.2
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 40 GITP--SQAIFPNLPGGQEPSKPCWSLPQEWAWVLKS----------AAPPLHSGLPSCQ 87
G++P + A P L GG S+ WSL +E VL+ AA P S P
Sbjct: 624 GLSPFHAPAQSPGLHGGAAGSREGWSLLEE---VLEQQRLLQLQHHPAAAPGCSQAPQPA 680
Query: 88 VHSLTSTPSEGPG-EPLP------GLEFLPHHMLDT 116
P +GPG PLP GL LP +L T
Sbjct: 681 PAPFVIAPCDGPGAAPLPSTLLTSGLPLLPPPLLQT 716
>gi|158534055 round spermatid basic protein 1-like [Homo sapiens]
Length = 846
Score = 28.9 bits (63), Expect = 1.6
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 57 PSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGP---GEPLPG-------- 105
PS + P W++ SAAP S S + T+ PS +P+P
Sbjct: 75 PSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASLSQPVPRKLLVPPTL 134
Query: 106 LEFLPHHMLDTAVGSFMGNFSKFKEDWRSRNTAR 139
L PHH+L A + +K + R R
Sbjct: 135 LHAQPHHLLLPAAAAAASANAKSRRPKEKREKER 168
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 28.5 bits (62), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 52 PGGQEPSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPG 100
PG P++ W+ P+ L+++ PL LPS SLT S GPG
Sbjct: 867 PGEAGPTRRTWASPK-----LRASVSPLDL-LPSKSTASLTKPHSTGPG 909
>gi|241982712 TBP-interacting protein isoform 1 [Homo sapiens]
Length = 1236
Score = 28.1 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 28 RLKMLEFLEELIGITPSQAIFPNLPGGQEPSKPC 61
R+ L FL+ L+G P++A P+LP P C
Sbjct: 496 RMDALAFLQGLLGTEPAEAFHPHLPILLPPVMAC 529
>gi|112420977 TBP-interacting protein isoform 2 [Homo sapiens]
Length = 1119
Score = 28.1 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 28 RLKMLEFLEELIGITPSQAIFPNLPGGQEPSKPC 61
R+ L FL+ L+G P++A P+LP P C
Sbjct: 403 RMDALAFLQGLLGTEPAEAFHPHLPILLPPVMAC 436
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 28.1 bits (61), Expect = 2.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 62 WSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTS 93
W L + W W L A+ L S LP +H+L S
Sbjct: 1151 WVLCKGWNWRLARASQGLASHLPPWAIHTLAS 1182
>gi|209954788 activating transcription factor 6 beta isoform b
[Homo sapiens]
Length = 700
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 8 VQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQA------IFPNLPGGQEPSKPC 61
V E +T+ ++C +Q+ D L+ + ++PS+ IFP+L EPS PC
Sbjct: 38 VAEEQTQLFRCPEQDVPFDG-----SSLDVGMDVSPSEPPWELLPIFPDLQVKSEPSSPC 92
Query: 62 WS 63
S
Sbjct: 93 SS 94
>gi|20631977 activating transcription factor 6 beta isoform a
[Homo sapiens]
Length = 703
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 8 VQEMKTEKYKCSKQEEVTDERLKMLEFLEELIGITPSQA------IFPNLPGGQEPSKPC 61
V E +T+ ++C +Q+ D L+ + ++PS+ IFP+L EPS PC
Sbjct: 41 VAEEQTQLFRCPEQDVPFDG-----SSLDVGMDVSPSEPPWELLPIFPDLQVKSEPSSPC 95
Query: 62 WS 63
S
Sbjct: 96 SS 97
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 28.1 bits (61), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 77 PPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHHMLDTAVGSFM 122
PP LP + P E PG P+P F+P HM +A G++M
Sbjct: 38 PPPGMPLPPADIGP---PPYEPPGHPMPQPGFIPPHM--SADGTYM 78
>gi|4557251 ADAM metallopeptidase domain 10 [Homo sapiens]
Length = 748
Score = 27.7 bits (60), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 62 WSLPQEWAWVLKSAAP-PLHSG-LPSCQVHSLTSTPSEGPGEPLPG 105
W + WA +L A L +G + C VH+ +S P P +PLPG
Sbjct: 673 WIVAHWWAVLLMGIALIMLMAGFIKICSVHTPSSNPKLPPPKPLPG 718
>gi|169179313 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 27.7 bits (60), Expect = 3.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 73 KSAAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFS 126
+ ++PP+ + GLP CQ + + GPG P L H++L T F +F
Sbjct: 34 RPSSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFG 93
Query: 127 K 127
K
Sbjct: 94 K 94
>gi|169181069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 27.7 bits (60), Expect = 3.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 73 KSAAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFS 126
+ ++PP+ + GLP CQ + + GPG P L H++L T F +F
Sbjct: 34 RPSSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFG 93
Query: 127 K 127
K
Sbjct: 94 K 94
>gi|238776840 patatin-like phospholipase domain containing 1 isoform
3 [Homo sapiens]
Length = 532
Score = 27.7 bits (60), Expect = 3.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 58 SKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLP 104
S P L Q A L S+ P SG+P ++ PS PG LP
Sbjct: 344 SAPVSPLEQPPAQPLASSTPLSLSGMPPVSFPAVHKPPSSTPGSSLP 390
>gi|224589138 patatin-like phospholipase domain containing 1 isoform
2 [Homo sapiens]
Length = 446
Score = 27.7 bits (60), Expect = 3.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 58 SKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLP 104
S P L Q A L S+ P SG+P ++ PS PG LP
Sbjct: 258 SAPVSPLEQPPAQPLASSTPLSLSGMPPVSFPAVHKPPSSTPGSSLP 304
>gi|224593249 patatin-like phospholipase domain containing 1 isoform
1 [Homo sapiens]
Length = 437
Score = 27.7 bits (60), Expect = 3.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 58 SKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLP 104
S P L Q A L S+ P SG+P ++ PS PG LP
Sbjct: 249 SAPVSPLEQPPAQPLASSTPLSLSGMPPVSFPAVHKPPSSTPGSSLP 295
>gi|169178065 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 75 AAPPLHS--GLPSCQVHSLTSTPS----EGPGEPLPGLEFLPHHMLDTAVGSFMGNFSK 127
++PP+ + GLP CQ + + GPG P L H++L T F +F K
Sbjct: 36 SSPPIRAALGLPLCQQNLWIAADGVSQLSGPGRPFGNPWLLGHNILGTTKKPFHLSFGK 94
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 27.3 bits (59), Expect = 4.7
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 35 LEELIGITPSQAIFPNLPGGQEPSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQV 88
LEE+ + PS FP+L GG+ SK C P E V+ AAP L C V
Sbjct: 1476 LEEVSPMLPSH--FPDLSGGKVLSKTC---PPE-RTVVPGAAPSLPGKGSGCSV 1523
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 27.3 bits (59), Expect = 4.7
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Query: 49 PNLPGGQEPSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEF 108
P+ P P ++P+ + S PP S P Q H S G G GLEF
Sbjct: 596 PSHPSAHGSPAPVSTMPKR----MSSEGPPRMS--PKAQRHPRNHRVSAGRGSISSGLEF 649
Query: 109 LPHH 112
+ H+
Sbjct: 650 VSHN 653
>gi|118600965 hexaprenyldihydroxybenzoate methyltransferase [Homo
sapiens]
Length = 369
Score = 27.3 bits (59), Expect = 4.7
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 63 SLPQEWAWVLKSAAPPLHS----GLPSCQVHSLTSTPSEGPGEPLPGLEFL 109
+L +W W + PLHS +P + + L + P+ PG+PL G++ L
Sbjct: 102 ALAHKW-WDEQGVYAPLHSMNDLRVPFIRDNLLKTIPNHQPGKPLLGMKIL 151
>gi|25914749 ATP-binding cassette, sub-family C, member 10 [Homo
sapiens]
Length = 1464
Score = 26.9 bits (58), Expect = 6.1
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 57 PSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFL 109
P P + LP W L+ AA L S P + + P GPG P+ GLE L
Sbjct: 10 PRSPDYILPCSPGWRLRLAASFLLSVFPLLDLLPVALPPGAGPG-PI-GLEVL 60
>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
Length = 4022
Score = 26.9 bits (58), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Query: 43 PSQAIFPNLPGGQEP-----SKPCWSL 64
P A F PGG++P S PCW L
Sbjct: 3140 PDSATFSICPGGEQPAMKSSSLPCWDL 3166
>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
Length = 3997
Score = 26.9 bits (58), Expect = 6.1
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Query: 43 PSQAIFPNLPGGQEP-----SKPCWSL 64
P A F PGG++P S PCW L
Sbjct: 3115 PDSATFSICPGGEQPAMKSSSLPCWDL 3141
>gi|224548950 hypothetical protein LOC644844 [Homo sapiens]
Length = 82
Score = 26.9 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 9/36 (25%)
Query: 77 PPLHSGLPSCQVHSLTSTPSEGPGEPLPGLEFLPHH 112
PP H G C P GPG P PG PHH
Sbjct: 56 PPPHHGPGPCG-----PPPGHGPGHPPPG----PHH 82
>gi|7110735 ventral anterior homeobox 2 [Homo sapiens]
Length = 290
Score = 26.9 bits (58), Expect = 6.1
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 28 RLKMLEFLEELIGITPSQAIFPNLPGGQEPSKPCWSLPQEWAWVLKSAAPPLHSGLPSCQ 87
RL + L+ +TPS P G P S P+ SA+PPL LP+
Sbjct: 190 RLLSVPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLPPPLPAVC 249
Query: 88 VHS--LTSTPSEGPGEPLPGLEFLPHHMLDTAVGS 120
S L P+ G L F P+ L+ VGS
Sbjct: 250 FSSAPLLDLPA---GYELGSSAFEPYSWLERKVGS 281
>gi|122937289 kinesin family member 18B [Homo sapiens]
Length = 855
Score = 26.9 bits (58), Expect = 6.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 43 PSQAIFPNLPGGQEPSKPCWSLPQEWAWVLKSAAPPLHSGLPSC 86
PSQ P+ P G+ S PC S A V+KS P S + +C
Sbjct: 671 PSQG--PSTPKGERASSPCHSPRVCPATVIKSRVPLGPSAMQNC 712
>gi|8394376 syntaxin 18 [Homo sapiens]
Length = 335
Score = 26.9 bits (58), Expect = 6.1
Identities = 9/32 (28%), Positives = 22/32 (68%)
Query: 8 VQEMKTEKYKCSKQEEVTDERLKMLEFLEELI 39
+Q+++TE +K ++V + R +L+F+E+ +
Sbjct: 111 IQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYL 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,954,476
Number of Sequences: 37866
Number of extensions: 376890
Number of successful extensions: 990
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 971
Number of HSP's gapped (non-prelim): 58
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.