Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIF18B Sequence: fasta or formatted (855aa) NCBI GI: 122937289
Description:

kinesin family member 18B

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         64           2
 C cysteine            1.8         15           1
 D aspartate           4.2         36           1
 E glutamate           6.5         56           2
 F phenylalanine       2.2         19           1
 G glycine             7.0         60           3
 H histidine           2.3         20           1
 I isoleucine          2.8         24           1
 K lysine              5.0         43           3
 L leucine            10.3         88           2
 M methionine          1.6         14           1
 N asparagine          2.6         22           1
 P proline            10.4         89           3
 Q glutamine           6.0         51           2
 R arginine            7.4         63           3
 S serine              8.5         73           3
 T threonine           6.0         51           2
 V valine              5.8         50           3
 W tryptophan          0.4          3           1
 Y tyrosine            1.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 18B 
KIF18A                0.259   kinesin family member 18A 
KIF19                 0.181   kinesin family member 19 
KIF1C                 0.139   kinesin family member 1C 
KIF3A                 0.135   kinesin family member 3A 
KIF13B                0.133   kinesin family member 13B 
KIF13A                0.133   kinesin family member 13A isoform d 
KIF13A                0.133   kinesin family member 13A isoform c 
KIF13A                0.133   kinesin family member 13A isoform b 
KIF13A                0.133   kinesin family member 13A isoform a 
KIF3B                 0.132   kinesin family member 3B 
KIF16B                0.132   kinesin-like motor protein C20orf23 
KIF24                 0.127   kinesin family member 24 
KIF1B                 0.125   kinesin family member 1B isoform alpha 
KIF1B                 0.125   kinesin family member 1B isoform b 
KIF1A                 0.124   axonal transport of synaptic vesicles 
KIF17                 0.123   kinesin family member 17 isoform b 
KIF17                 0.123   kinesin family member 17 isoform a 
KIF3C                 0.123   kinesin family member 3C 
KIF4B                 0.121   kinesin family member 4B 
KIF11                 0.121   kinesin family member 11 
KIF4A                 0.120   kinesin family member 4 
KIF7                  0.117   kinesin family member 7 
KIF27                 0.116   kinesin family member 27 
KIF15                 0.115   kinesin family member 15 
KIF5C                 0.114   kinesin family member 5C 
KIF5A                 0.113   kinesin family member 5A 
KIF14                 0.113   kinesin family member 14 
KIF21B                0.111   kinesin family member 21B 
KIF21A                0.110   kinesin family member 21A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press