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Search of human proteins with 239756987
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
(459 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 928 0.0
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 840 0.0
gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo ... 91 3e-18
gi|163965366 nascent polypeptide-associated complex alpha subuni... 62 8e-10
gi|110832843 TBP-associated factor 4 [Homo sapiens] 62 1e-09
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 61 2e-09
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 61 2e-09
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 57 3e-08
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 57 3e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 57 3e-08
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 57 3e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 5e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 1e-07
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 55 2e-07
gi|40353727 synaptopodin isoform A [Homo sapiens] 54 4e-07
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 53 5e-07
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 52 9e-07
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 52 9e-07
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 52 9e-07
gi|54860079 nadrin isoform 1 [Homo sapiens] 52 1e-06
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 52 1e-06
gi|110815800 WD repeat domain 32 [Homo sapiens] 52 1e-06
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 51 2e-06
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 50 3e-06
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 50 3e-06
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 50 4e-06
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 50 4e-06
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 50 4e-06
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 50 4e-06
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 928 bits (2398), Expect = 0.0
Identities = 459/459 (100%), Positives = 459/459 (100%)
Query: 1 METFEKHKAVSIQSELSNISNCCLPLGSNAQFLLRRRGMSKCDKIMCNDMGTLEPTPLLR 60
METFEKHKAVSIQSELSNISNCCLPLGSNAQFLLRRRGMSKCDKIMCNDMGTLEPTPLLR
Sbjct: 1 METFEKHKAVSIQSELSNISNCCLPLGSNAQFLLRRRGMSKCDKIMCNDMGTLEPTPLLR 60
Query: 61 RKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQR 120
RKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQR
Sbjct: 61 RKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQR 120
Query: 121 SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSAT 180
SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSAT
Sbjct: 121 SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSAT 180
Query: 181 RVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE 240
RVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE
Sbjct: 181 RVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE 240
Query: 241 LGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRE 300
LGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRE
Sbjct: 241 LGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRE 300
Query: 301 RLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCAQLAQQLARAGKSTES 360
RLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCAQLAQQLARAGKSTES
Sbjct: 301 RLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCAQLAQQLARAGKSTES 360
Query: 361 RNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGF 420
RNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGF
Sbjct: 361 RNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGF 420
Query: 421 RGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459
RGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV
Sbjct: 421 RGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 840 bits (2169), Expect = 0.0
Identities = 415/415 (100%), Positives = 415/415 (100%)
Query: 45 IMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFA 104
IMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFA
Sbjct: 45 IMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFA 104
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP
Sbjct: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS
Sbjct: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
Query: 225 RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPG 284
RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPG
Sbjct: 225 RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPG 284
Query: 285 EGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSC 344
EGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSC
Sbjct: 285 EGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSC 344
Query: 345 AQLAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARR 404
AQLAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARR
Sbjct: 345 AQLAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARR 404
Query: 405 APRTSSGVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459
APRTSSGVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV
Sbjct: 405 APRTSSGVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459
>gi|239751502 PREDICTED: hypothetical protein XP_002347876 [Homo
sapiens]
Length = 74
Score = 90.5 bits (223), Expect = 3e-18
Identities = 45/49 (91%), Positives = 45/49 (91%)
Query: 411 GVRRGAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 459
G AAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV
Sbjct: 26 GFAEAAAPGFRGSSNTARRRSIPVSLNRAQALCPPQSTSLLVPSLQVPV 74
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 62.4 bits (150), Expect = 8e-10
Identities = 74/263 (28%), Positives = 102/263 (38%), Gaps = 24/263 (9%)
Query: 84 LRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGK------ 137
L PP G P TPP G ++ P P+ + SP GG + K
Sbjct: 1117 LATPPHKGA-PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1175
Query: 138 RKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRH 197
T P+ +GG T AP + AA P PSP +T S P ++ + +
Sbjct: 1176 AATPPSPKGGLATPSPKGAPTTPAATP---PSPKGGLATPSPKGAPTTPAATPPSPKGGL 1232
Query: 198 AAPDAPGAPSRSTSQATPPPAPRFPASRRP-GAPRLLSRTRQRELGGSAAPSVAFSGDVT 256
A P GAP +T ATPP PA+ P GAP + T GG A P + +
Sbjct: 1233 ATPSPKGAP--TTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Query: 257 LSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDP------PPAPFG 310
+ P S K P T+ P+ TP P + P +P + P PP+P G
Sbjct: 1291 VVT---PPSPKGGP--ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKG 1345
Query: 311 QMILILGFRVGRGGTGSWSWRRG 333
L +GG + S + G
Sbjct: 1346 TPTLPATTPSSKGGPTTPSSKEG 1368
Score = 60.5 bits (145), Expect = 3e-09
Identities = 65/216 (30%), Positives = 82/216 (37%), Gaps = 22/216 (10%)
Query: 88 PEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGK------RKTR 141
P P P TPP G ++ P+P+ + SP GG + K T
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Query: 142 PAGRGGGRTRRVVAAPESAAAAP----GRSPSPADPGSTSSATRVPRARRSSRRALQPRH 197
P+ +GG T AP AA P G +P G+ + A P + + A P
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG-PATSPPK 1307
Query: 198 AAPDAPGA--PSRSTSQATPPP--APRFPASRRP---GAPRLLSRTRQRELGGSAAPSVA 250
AP P A PS S TPPP AP PA P G P L + T + GG PS
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSK-GGPTTPSSK 1366
Query: 251 FSGD---VTLSLERGPASAKPPPQVLTAEPREDATP 283
T S + GPA P P+ A P P
Sbjct: 1367 EGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Score = 53.1 bits (126), Expect = 5e-07
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 46/230 (20%)
Query: 106 GRISPPAPQAFLAQRSPARASPGGGFTSAEGKRK------TRPAGRGGGRTRRVV--AAP 157
G ++PPA +++PA ++P GG + K T P+ + ++V ++P
Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP 1490
Query: 158 ESAAAAPGRSPSPADPGSTSSATRVPRARRSSRR----------------ALQPRHAA-P 200
+ A A P +P P S+ + A SSRR L P+ A P
Sbjct: 1491 KKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIP 1550
Query: 201 DAPGAPSRSTSQATPPP--APRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLS 258
A PS + A P P AP P+S+ +P ++ + + APS
Sbjct: 1551 PAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYK-----GAPS---------- 1595
Query: 259 LERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
P PP V + P+E TP P EK P +P + P P
Sbjct: 1596 ----PKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPP 1641
Score = 50.1 bits (118), Expect = 4e-06
Identities = 75/264 (28%), Positives = 95/264 (35%), Gaps = 56/264 (21%)
Query: 60 RRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVL--WTPPFAPGRISPPAPQAFL 117
+ +A G S + A P PP P P W P P +PP+P+
Sbjct: 920 KARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP--TPPAATPPSPKG-- 975
Query: 118 AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTS 177
PA SP G T T P+ +GG T AP A P PSP +
Sbjct: 976 ---GPATPSPKGAPTPPAA---TPPSPKGGPATPSPKGAPTPPAVTP---PSPK---GSP 1023
Query: 178 SATRVPRARRSSRRALQPRHAAPDAP-GAPSRSTSQATPPP--APRFPASRRP------- 227
+AT P+ A P A P +P G+P+ ATP P AP PA+ P
Sbjct: 1024 AATPFPKG------ASTPPAATPPSPKGSPA-----ATPLPKGAPTTPAATLPSPKGGPA 1072
Query: 228 -----GAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDAT 282
GAP + T GG A PS PA+ P P+ A P
Sbjct: 1073 TPSLKGAPTPPAATPPSPKGGPATPS-------PKGAPMPPAATPPSPKGGLATP----- 1120
Query: 283 PGEGRLPDFEKQPHSPRERLDPPP 306
P +G P SP+ L PP
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPP 1144
Score = 43.9 bits (102), Expect = 3e-04
Identities = 58/221 (26%), Positives = 86/221 (38%), Gaps = 31/221 (14%)
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P ++ P P+ A +P +A P TS+ K+ R AP+ A+P
Sbjct: 888 PSVVNLPFPKEGPATPAPKQA-PALSMTSSSPKKA------------RATPAPKGIPASP 934
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAP-GAPSRSTSQATP------PP 217
+P P +T + + A S + A P A P +P G P+ + + P PP
Sbjct: 935 SPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPP 994
Query: 218 APR-FPASRRP-GAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTA 275
+P+ PA+ P GAP + T G AA F + P S K P T
Sbjct: 995 SPKGGPATPSPKGAPTPPAVTPPSPKGSPAA--TPFPKGASTPPAATPPSPKGSP-AATP 1051
Query: 276 EPREDATPGEGRLPDFEKQPHSPRERLDP------PPAPFG 310
P+ T LP + P +P + P PP+P G
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKG 1092
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 62.0 bits (149), Expect = 1e-09
Identities = 78/269 (28%), Positives = 96/269 (35%), Gaps = 52/269 (19%)
Query: 54 EPTPLLRRKAAQLQPGRGKSCGARRAALPL--------LRYPPE-------PGVFPFLVL 98
EP P R + P R RR +P LR PPE P V
Sbjct: 88 EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147
Query: 99 WTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPE 158
P AP + PA A LA R+ PG G G K PAG G +T AA
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK--PAGPGAAQTLNGSAALL 205
Query: 159 SA--AAAPGRS------------PSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPG 204
++ AAAP S P PA PG+ A A P AAP P
Sbjct: 206 NSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA------AAPPAPAAPSPPA 259
Query: 205 APSRSTSQATPPPA-------------PRFPASRRPGAPRLLSRTRQRELGGSAAPSVAF 251
AP+ + A PPP P P + P P + G + AP+ A
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA 319
Query: 252 SGDVTLSLERGP--ASAKPPPQVLTAEPR 278
G +S + GP A+A P P V P+
Sbjct: 320 GGPAGVSGQPGPGAAAAAPAPGVKAESPK 348
Score = 51.6 bits (122), Expect = 1e-06
Identities = 61/214 (28%), Positives = 77/214 (35%), Gaps = 33/214 (15%)
Query: 121 SPARASPGGGFTSAEG----KRKTRPAGR----GGGRTRRVVAAPESAAAAPGRSP---- 168
SPA A+ G AEG + PAGR GGG R +P G +P
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAK 125
Query: 169 -SPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRP 227
P GS S VP A + +P A P P P+ ++A P P P P
Sbjct: 126 LRPPPEGSAGSCAPVP-AAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
Query: 228 GAPRLLSRTRQRELGGS---------AAPSVAFSGDVTLSLERGPASAKP------PPQV 272
G + + L GS AAP+V+ + +L P A P PP V
Sbjct: 185 GPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFV 244
Query: 273 LTAEPREDATPGEGRLPDFEKQPHSPRERLDPPP 306
A P A P P P +P PPP
Sbjct: 245 GAAAPPAPAAPS----PPAAPAPAAPAAAPPPPP 274
Score = 43.9 bits (102), Expect = 3e-04
Identities = 51/197 (25%), Positives = 69/197 (35%), Gaps = 42/197 (21%)
Query: 79 AALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKR 138
A LPL P+P P V+ TPPF G +PPAP A +PA A+P
Sbjct: 224 ALLPL----PKPAA-PGTVIQTPPFV-GAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAP 277
Query: 139 KTR-------------------PAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSA 179
T PA G + AP AA P PG+ ++A
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAA 337
Query: 180 TRVPRARRSSRRALQ--PRHAAPDAPGAPSRSTSQ---------------ATPPPAPRFP 222
S +R +Q P A A P+ + + A PPPAP P
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTP 397
Query: 223 ASRRPGAPRLLSRTRQR 239
GA ++++ R
Sbjct: 398 TGLPKGAAGAVTQSLSR 414
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/153 (29%), Positives = 52/153 (33%), Gaps = 21/153 (13%)
Query: 139 KTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHA 198
+ R A G V +P AA A +P+ PG+ RAR P
Sbjct: 49 EVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRAR--------PGGG 100
Query: 199 APDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLS 258
P PG PS P P PA P A +L R GS AP V + V
Sbjct: 101 GPQRPGPPS--------PRRPLVPAGPAPPAAKL--RPPPEGSAGSCAP-VPAAAAVAAG 149
Query: 259 LERGPASAKPP--PQVLTAEPREDATPGEGRLP 289
E PA P P L A PG G P
Sbjct: 150 PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGP 182
Score = 33.5 bits (75), Expect = 0.41
Identities = 58/212 (27%), Positives = 69/212 (32%), Gaps = 52/212 (24%)
Query: 51 GTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTP--PFAPGRI 108
GT+ TP AA P A A P PP P P + P P P
Sbjct: 235 GTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPA-PATLARPPGHPAGPPTA 293
Query: 109 SPPAPQAFLAQR------SPARASPGGGFTSAEGK-------RKTRPAGRGGGRTRRVVA 155
+P P AQ +PA A GG G+ P + R V A
Sbjct: 294 APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA 353
Query: 156 APESA----AAAP--------------GRSPSPAD-----PGS------------TSSAT 180
AP +A A+ P G PSPA PG+ T S +
Sbjct: 354 APPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLS 413
Query: 181 RVPRARRSSRRA-LQPRHAAPDAPGAPSRSTS 211
R P A S RA L P AP P P T+
Sbjct: 414 RTPTATTSGIRATLTPTVLAPRLPQPPQNPTN 445
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 61.2 bits (147), Expect = 2e-09
Identities = 78/273 (28%), Positives = 106/273 (38%), Gaps = 63/273 (23%)
Query: 88 PEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARAS-PGGGFTSAEGKRKTRPA--- 143
P P P L TP A I P P + ++RS + PGG + +R+ RPA
Sbjct: 588 PAPSPVP---LTTPASAEEAI--PLPASSDSERSASSVEGPGGALYARVARREARPARAR 642
Query: 144 GRGGGRT------RRVVAAPESA-------------AAAPGRSPSPADPGSTSSATRVPR 184
G GG + RR P+ A AAA GR+PSP PGS ++ + R
Sbjct: 643 GEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKR 702
Query: 185 ARRSSRRAL--------QPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLL-SR 235
R S ++ + R P PG P +T+ A P P P +R APR L +
Sbjct: 703 KRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSP----PRARARAAPRPLGAH 758
Query: 236 TRQRELGGSAAPSVAFSGDV---TLSLER--------GPASAKPPPQVL---------TA 275
R+R A + + DV T SL R GP PPQ
Sbjct: 759 GRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPAR 818
Query: 276 EPREDATPGEGRLPDFEKQPHSPRER--LDPPP 306
P TPG + P +PR++ + PP
Sbjct: 819 APPATETPGPEKAATDLPAPETPRKKTPIQKPP 851
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/197 (29%), Positives = 78/197 (39%), Gaps = 25/197 (12%)
Query: 55 PTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQ 114
P+P R++ + G+ R P R P P L +PP A R +P
Sbjct: 697 PSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLG 756
Query: 115 AFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPG 174
A +RSPA+ + +A+ + KTR GR E A A G PA P
Sbjct: 757 AHGRRRSPAKRAEAASMLAADVRGKTRSLGRA-----------EVALGAQGPREKPAPP- 804
Query: 175 STSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRP--GAPRL 232
+A+RS A R AP A P + AT PAP P + P PR
Sbjct: 805 --------QKAKRSVPPASPAR--APPATETPGPEKA-ATDLPAPETPRKKTPIQKPPRK 853
Query: 233 LSRTRQRELGGSAAPSV 249
SR ELG + AP++
Sbjct: 854 KSREAAGELGRAGAPTL 870
Score = 33.9 bits (76), Expect = 0.32
Identities = 40/158 (25%), Positives = 55/158 (34%), Gaps = 23/158 (14%)
Query: 153 VVAAPESAAAAPGRSPS-PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTS 211
V P A A R P P P + + VP +S P A+ D+ RS S
Sbjct: 563 VYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDS----ERSAS 618
Query: 212 QATPPPAPRFP-ASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
P + +RR P +R R E+GG LSL P KPPP
Sbjct: 619 SVEGPGGALYARVARREARP---ARARG-EIGG-------------LSLSPSPERRKPPP 661
Query: 271 QVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
+P+ G+ + P P + P+P
Sbjct: 662 PDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 699
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 61.2 bits (147), Expect = 2e-09
Identities = 78/273 (28%), Positives = 106/273 (38%), Gaps = 63/273 (23%)
Query: 88 PEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARAS-PGGGFTSAEGKRKTRPA--- 143
P P P L TP A I P P + ++RS + PGG + +R+ RPA
Sbjct: 583 PAPSPVP---LTTPASAEEAI--PLPASSDSERSASSVEGPGGALYARVARREARPARAR 637
Query: 144 GRGGGRT------RRVVAAPESA-------------AAAPGRSPSPADPGSTSSATRVPR 184
G GG + RR P+ A AAA GR+PSP PGS ++ + R
Sbjct: 638 GEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKR 697
Query: 185 ARRSSRRAL--------QPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLL-SR 235
R S ++ + R P PG P +T+ A P P P +R APR L +
Sbjct: 698 KRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSP----PRARARAAPRPLGAH 753
Query: 236 TRQRELGGSAAPSVAFSGDV---TLSLER--------GPASAKPPPQVL---------TA 275
R+R A + + DV T SL R GP PPQ
Sbjct: 754 GRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPAR 813
Query: 276 EPREDATPGEGRLPDFEKQPHSPRER--LDPPP 306
P TPG + P +PR++ + PP
Sbjct: 814 APPATETPGPEKAATDLPAPETPRKKTPIQKPP 846
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/197 (29%), Positives = 78/197 (39%), Gaps = 25/197 (12%)
Query: 55 PTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQ 114
P+P R++ + G+ R P R P P L +PP A R +P
Sbjct: 692 PSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLG 751
Query: 115 AFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPG 174
A +RSPA+ + +A+ + KTR GR E A A G PA P
Sbjct: 752 AHGRRRSPAKRAEAASMLAADVRGKTRSLGRA-----------EVALGAQGPREKPAPP- 799
Query: 175 STSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRP--GAPRL 232
+A+RS A R AP A P + AT PAP P + P PR
Sbjct: 800 --------QKAKRSVPPASPAR--APPATETPGPEKA-ATDLPAPETPRKKTPIQKPPRK 848
Query: 233 LSRTRQRELGGSAAPSV 249
SR ELG + AP++
Sbjct: 849 KSREAAGELGRAGAPTL 865
Score = 33.9 bits (76), Expect = 0.32
Identities = 40/158 (25%), Positives = 55/158 (34%), Gaps = 23/158 (14%)
Query: 153 VVAAPESAAAAPGRSPS-PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTS 211
V P A A R P P P + + VP +S P A+ D+ RS S
Sbjct: 558 VYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIPLPASSDS----ERSAS 613
Query: 212 QATPPPAPRFP-ASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
P + +RR P +R R E+GG LSL P KPPP
Sbjct: 614 SVEGPGGALYARVARREARP---ARARG-EIGG-------------LSLSPSPERRKPPP 656
Query: 271 QVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
+P+ G+ + P P + P+P
Sbjct: 657 PDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSP 694
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 58.9 bits (141), Expect = 9e-09
Identities = 97/351 (27%), Positives = 126/351 (35%), Gaps = 62/351 (17%)
Query: 111 PAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPES-AAAAPGRSPS 169
P P QR P RA G A G A +RR+ P + A+PG P+
Sbjct: 43 PPPILPAPQRPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPG--PA 100
Query: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
P P + S R P R R AP + G + ++A PP
Sbjct: 101 PGAPRARGSCGREPGPR---------RRRAPSSAGKRPAAAARAAPP------------R 139
Query: 230 PRLLSRTRQRELGGSAAPSVAFS-------GDVTLSLERGPASAKPP--PQVLTAEPRED 280
R L+R R +G PSV S R P PP P++ +A P
Sbjct: 140 QRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRL 199
Query: 281 ATPGEG-RLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGS--- 336
A P G R P P R R + PA G L L + RGG + RR G
Sbjct: 200 AAPLAGSRAPSLSPFPRRCRRRAERSPAGHG---LPLPRSLSRGGEVVGARRRRGGEERR 256
Query: 337 --AELPGCSCAQ--LAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGL 392
GC+ + A G++ E R R+ RGGG GV+ E QG
Sbjct: 257 VRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK-----RGGGPGVSPREG---AQGE 308
Query: 393 GLRG-------TEDWCARRAPRTSSG---VRRGAAPGFRGSSNTARRRSIP 433
G+RG C R +P T G R A G R S+ +A +P
Sbjct: 309 GVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVP 359
Score = 30.8 bits (68), Expect = 2.7
Identities = 36/126 (28%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Query: 183 PRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELG 242
PR + P+ DAPG S + PPP PA +RP TR RE
Sbjct: 11 PRTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPI--LPAPQRP-------PTRAREWE 61
Query: 243 GSA-APSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRER 301
G+A A G L+L + P A P PG R + PR R
Sbjct: 62 GAAWAAGATGVGAALLALPGSRRLGRVPLTFREASP--GPAPGAPRARGSCGREPGPRRR 119
Query: 302 LDPPPA 307
P A
Sbjct: 120 RAPSSA 125
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 57.4 bits (137), Expect = 3e-08
Identities = 71/250 (28%), Positives = 87/250 (34%), Gaps = 50/250 (20%)
Query: 70 RGKSCGARRAALPLLRYPPE---PGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARAS 126
RG SCG R PL + P V W P AP + PPA P A+
Sbjct: 64 RGDSCGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAVRPPAA-------GPPAAA 116
Query: 127 PGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRA- 185
P PA AA SAA+ SP A P + +A R P A
Sbjct: 117 PAA----------VCPA-----------AADPSAASLCAASPPAAVPAAVPAAVRPPAAG 155
Query: 186 -RRSSRRALQPRHAAPDAPGAPSRSTSQATP---PPAPRFPASRRPGAPRLLSRTRQREL 241
++ A+ P A P A + S A P PA PA+ PGA
Sbjct: 156 PPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGA-----------A 204
Query: 242 GGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRER 301
G SAA A S + PA+A P A R A P + + P +P
Sbjct: 205 GPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAI 264
Query: 302 LDP---PPAP 308
P PPAP
Sbjct: 265 AQPVSFPPAP 274
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 57.0 bits (136), Expect = 3e-08
Identities = 116/402 (28%), Positives = 148/402 (36%), Gaps = 109/402 (27%)
Query: 49 DMGTLEPTPLL----RRKAAQLQPGRGKSCGA---RRAALPLLRYPPEPGVFPFLVLWTP 101
+ G +P+P + R K Q + GRG R AA L P EP TP
Sbjct: 106 ERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREP---------TP 156
Query: 102 PFAPGRISPPA-----PQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAA 156
P GR+S P PQ+F R P+ P GRG GR R
Sbjct: 157 P---GRLSAPPRHGPHPQSF---RRPS----------------AHPPGRGSGRVPR--GQ 192
Query: 157 PESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP 216
PE A S A GS +S + R+ R A + R A A G+ R ++
Sbjct: 193 PEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEA--AAGSRGRGGAER--- 247
Query: 217 PAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPP--PQVLT 274
PA R A + P A LL+ +A S+A SL R P PP P++ +
Sbjct: 248 PAARGSAQQPPLARLLLA----------SAVSLA------ASLARSP----PPLQPRLGS 287
Query: 275 AEPREDATPGEG-RLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRG 333
A P A P G R P P R R + PA G L L + RGG + RR
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHG---LPLPRSLSRGGEVVGARRRR 344
Query: 334 AGS-----AELPGCSCAQ--LAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERD 386
G GC+ + A G++ E R R+ RGGG GV+ E
Sbjct: 345 GGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK-----RGGGPGVSPRE-- 397
Query: 387 DVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGFRGSSNTAR 428
G +G GVR G P RGSS R
Sbjct: 398 ------GAQG-------------EGVRGGVTPRARGSSTCLR 420
Score = 36.2 bits (82), Expect = 0.064
Identities = 62/233 (26%), Positives = 74/233 (31%), Gaps = 23/233 (9%)
Query: 59 LRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFL- 117
L R LQP G + R AA P FP +P P P++
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 118 -AQRSPARASPGGGFTSAEGKRK----------TRPAGRGGGRTRRVVAAPESAAAAPGR 166
+ AR GG G+R+ PA G RR PG
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV 393
Query: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-PAPRFPASR 225
SP G PRAR SS L+P A GAP R+ A P AP A
Sbjct: 394 SPREGAQGEGVRGGVTPRARGSS-TCLRPSPATWQG-GAPYRAIFAAGPRLSAPSAEAEE 451
Query: 226 RPGA--------PRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
PG L SR + G +PS + L E G S P
Sbjct: 452 VPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHP 504
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 57.0 bits (136), Expect = 3e-08
Identities = 72/241 (29%), Positives = 91/241 (37%), Gaps = 42/241 (17%)
Query: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTS---AEGKRKTRPAGRGGGRTR------ 151
P P R S P + PA+ + G +S A G + P G+ G R
Sbjct: 75 PRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVA 134
Query: 152 --RVVAAPESAAAAPG--RSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAP- 206
+ AP+ +A + G R S PG+ S A R+R + PR A P P
Sbjct: 135 RGKATEAPKRSALSAGARRDTSGPTPGTPSPAM-ARRSRAAGTEVGLPRPAPSARPRPPT 193
Query: 207 -------SRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAP--SVAFSGDVTL 257
S ++ +T P+P A RRP A L R R L SA P S A SG
Sbjct: 194 EGPRKSVSSASEHSTTEPSPA--ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 251
Query: 258 SLERGPA----------SAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPA 307
R PA A PPQV PR+DA P G L SP PP+
Sbjct: 252 GTPRAPAHPSQPKPKGLQALRPPQV--TPPRKDAAPALGPLSSSPLATPSP----SAPPS 305
Query: 308 P 308
P
Sbjct: 306 P 306
Score = 49.3 bits (116), Expect = 7e-06
Identities = 97/376 (25%), Positives = 120/376 (31%), Gaps = 76/376 (20%)
Query: 57 PLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAF 116
P L Q+ P S +A P + PP P + PP AP ++ P QA
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 492
Query: 117 LAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAP----------ESAAAAPGR 166
SP + PG S P + V+AAP AP R
Sbjct: 493 ---PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR 549
Query: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
P+P P ++ S R+ A AP P PSRS S P +S
Sbjct: 550 PPTPG-PDTSVSGPRLTLA------------LAPGPPPPPSRSPSSTLSGPDLAGHSSSA 596
Query: 227 PGAPRLLSRTRQRELGGSA---------------------APSVAFSGDVTLSL----ER 261
P L GG+A AP +AF G L
Sbjct: 597 TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT 656
Query: 262 GPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVG 321
GP SA + E E ATP G LDP P+P G +
Sbjct: 657 GPGSADGLCTIYETEGPESATPAPG--------------ALDPGPSPGTS-----GGKAA 697
Query: 322 RGGTGSWSWR--RGAGSAELP-GCSCAQLAQQ-LARAGKSTESRNRLNGRRGGVEARGGG 377
G S R + A ELP G A + Q L+R + G GG GG
Sbjct: 698 AGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGG 757
Query: 378 G--GVARAERDDVLQG 391
G G ARA D G
Sbjct: 758 GVTGGARAALSDAELG 773
Score = 48.9 bits (115), Expect = 1e-05
Identities = 61/267 (22%), Positives = 83/267 (31%), Gaps = 30/267 (11%)
Query: 48 NDMGTLEPTPLLRRKAA-----QLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPP 102
++ T EP+P RR+ + Q R S A + P P G P
Sbjct: 204 SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT---------P 254
Query: 103 FAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAA 162
AP S P P+ A R P P A G + P +AP S
Sbjct: 255 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQT 314
Query: 163 APGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFP 222
P +P +TS + LQ H+ +P +T PPA P
Sbjct: 315 LPSPPATPPSQATTSLGS----------PTLQATHSFLPSPPLSPLATPPPQAPPALALP 364
Query: 223 ASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKP-PPQVLTAEPREDA 281
+ P +P L A PS + + L + P S P PP P
Sbjct: 365 PLQAPPSP-----PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 419
Query: 282 TPGEGRLPDFEKQPHSPRERLDPPPAP 308
P + P L PP+P
Sbjct: 420 PVSPSATPPSQAPPSLAAPPLQVPPSP 446
Score = 44.3 bits (103), Expect = 2e-04
Identities = 73/264 (27%), Positives = 85/264 (32%), Gaps = 84/264 (31%)
Query: 80 ALPLLRYPPEPGVFPFLVLWTPPFAP-GRISPPAPQAFLAQRSPARASPGGGFTSAEGKR 138
ALP L+ PP P +PP +P SP AP A A SP
Sbjct: 362 ALPPLQAPPSPPA-------SPPLSPLATPSPQAPNALAVHLLQAPFSPPPS-------- 406
Query: 139 KTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHA 198
V AP S A+P SPS P + P P
Sbjct: 407 -------------PPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-----------PLQV 442
Query: 199 APDAPGAPSRSTSQATPPPAPRFP--------ASRRPGAPRLLSRTRQRELGGSAAPSVA 250
P P +P S S ATPPP P A P AP L+ + L +P +
Sbjct: 443 PPSPPASPPMSPS-ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL---PSPPAS 498
Query: 251 FSGDV----TLSLERGPASAKPP--PQVLTA----------------EPREDATPGEGRL 288
F G + SL P + PP P VL A PR TPG
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG---- 554
Query: 289 PDFEKQPHSPRERL----DPPPAP 308
PD PR L PPP P
Sbjct: 555 PD--TSVSGPRLTLALAPGPPPPP 576
Score = 32.0 bits (71), Expect = 1.2
Identities = 45/197 (22%), Positives = 68/197 (34%), Gaps = 23/197 (11%)
Query: 104 APGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAA 163
APG ++P P + R P +P R G G R+ +A E A
Sbjct: 21 APGLLTPRPPGS---PRPPPPVTPAA----------LRVLGAAGAVGRKPLA--ERAGGI 65
Query: 164 PGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPA 223
G + + P + + T P A RA ++ +P +P R++ T P P
Sbjct: 66 GGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRAS--GTTRPGPLGQK 123
Query: 224 SRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
R A ++R + E +A S D + GP P P +
Sbjct: 124 GLRISAEETVARGKATEAPKRSALSAGARRDTS-----GPTPGTPSPAMARRSRAAGTEV 178
Query: 284 GEGRLPDFEKQPHSPRE 300
G R P +P P E
Sbjct: 179 GLPR-PAPSARPRPPTE 194
Score = 30.0 bits (66), Expect = 4.6
Identities = 68/287 (23%), Positives = 88/287 (30%), Gaps = 57/287 (19%)
Query: 198 AAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRT----------RQRELGGSAAP 247
AA P A + PP +PR P P A R+L R +GG+ P
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIP 71
Query: 248 SVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPA 307
A T + R PAS + A P ++ +PG P R P
Sbjct: 72 ESAPRAGPTRT-SRPPASGRGE----RAPPAKNTSPGPVSSPG--------RASGTTRPG 118
Query: 308 PFGQMILILGFR--VGRGGTGSWSWR-------RGAGSAELPGCSCAQLAQQLARAGKST 358
P GQ L + V RG R R S PG +A++ AG
Sbjct: 119 PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 178
Query: 359 ESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRRGAA- 417
R G V+ A + ARR P G++R A+
Sbjct: 179 GLPRPAPSARPRPPTEGPRKSVSSASEHSTTE-------PSPAARRRPSAGGGLQRPASR 231
Query: 418 ----------------PGFRGSSNTARRRSIPVSLNRAQALCPPQST 448
P RG+ S P QAL PPQ T
Sbjct: 232 SLSSSATPLSSPARSGPSARGTPRAPAHPSQP-KPKGLQALRPPQVT 277
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 57.0 bits (136), Expect = 3e-08
Identities = 116/402 (28%), Positives = 148/402 (36%), Gaps = 109/402 (27%)
Query: 49 DMGTLEPTPLL----RRKAAQLQPGRGKSCGA---RRAALPLLRYPPEPGVFPFLVLWTP 101
+ G +P+P + R K Q + GRG R AA L P EP TP
Sbjct: 106 ERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREP---------TP 156
Query: 102 PFAPGRISPPA-----PQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAA 156
P GR+S P PQ+F R P+ P GRG GR R
Sbjct: 157 P---GRLSAPPRHGPHPQSF---RRPS----------------AHPPGRGSGRVPR--GQ 192
Query: 157 PESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP 216
PE A S A GS +S + R+ R A + R A A G+ R ++
Sbjct: 193 PEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEA--AAGSRGRGGAER--- 247
Query: 217 PAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPP--PQVLT 274
PA R A + P A LL+ +A S+A SL R P PP P++ +
Sbjct: 248 PAARGSAQQPPLARLLLA----------SAVSLA------ASLARSP----PPLQPRLGS 287
Query: 275 AEPREDATPGEG-RLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRG 333
A P A P G R P P R R + PA G L L + RGG + RR
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHG---LPLPRSLSRGGEVVGARRRR 344
Query: 334 AGS-----AELPGCSCAQ--LAQQLARAGKSTESRNRLNGRRGGVEARGGGGGVARAERD 386
G GC+ + A G++ E R R+ RGGG GV+ E
Sbjct: 345 GGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRK-----RGGGPGVSPRE-- 397
Query: 387 DVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGFRGSSNTAR 428
G +G GVR G P RGSS R
Sbjct: 398 ------GAQG-------------EGVRGGVTPRARGSSTCLR 420
Score = 36.2 bits (82), Expect = 0.064
Identities = 62/233 (26%), Positives = 74/233 (31%), Gaps = 23/233 (9%)
Query: 59 LRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFL- 117
L R LQP G + R AA P FP +P P P++
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 118 -AQRSPARASPGGGFTSAEGKRK----------TRPAGRGGGRTRRVVAAPESAAAAPGR 166
+ AR GG G+R+ PA G RR PG
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGV 393
Query: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-PAPRFPASR 225
SP G PRAR SS L+P A GAP R+ A P AP A
Sbjct: 394 SPREGAQGEGVRGGVTPRARGSS-TCLRPSPATWQG-GAPYRAIFAAGPRLSAPSAEAEE 451
Query: 226 RPGA--------PRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPP 270
PG L SR + G +PS + L E G S P
Sbjct: 452 VPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHP 504
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 56.6 bits (135), Expect = 5e-08
Identities = 73/239 (30%), Positives = 89/239 (37%), Gaps = 46/239 (19%)
Query: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTR--------R 152
P G +PPA SP S G A G + P G+ G R +
Sbjct: 95 PASGRGERAPPAKNT-----SPGPVSSPG---RASGTTRPGPLGQKGLRISAEETVARGK 146
Query: 153 VVAAPESAAAAPG--RSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAP---- 206
AP+ +A + G R S PG+ S A R+R + PR A P P
Sbjct: 147 ATEAPKRSALSAGARRDTSGPTPGTPSPAM-ARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 207 ----SRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAP--SVAFSGDVTLSLE 260
S ++ +T P+P A RRP A L R R L SA P S A SG
Sbjct: 206 RKSVSSASEHSTTEPSPA--ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP 263
Query: 261 RGPA----------SAKPPPQVLTAEPREDATPGEGRL---PDFEKQPHSPRERLDPPP 306
R PA A PPQV PR+DA P G L P P + R PPP
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQV--TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPP 320
Score = 48.9 bits (115), Expect = 1e-05
Identities = 72/253 (28%), Positives = 91/253 (35%), Gaps = 32/253 (12%)
Query: 80 ALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRK 139
A P + PP P L +PP +P PP LA P +A P +
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLA-LPPLQAPPSPPASPPLSPLA 646
Query: 140 TRPAGRGGGRTRRVVAAPESAAAAPG-RSP--SPADPGSTSSATRVPRARRSSRRALQPR 196
T ++ AP S +P ++P PA P + SAT P ++ A P
Sbjct: 647 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT--PPSQAPPSLAAPPL 704
Query: 197 HAAPDAPGAPSRSTSQATPPP------------APRFPASRRPGAPRLLSRTRQRELGGS 244
P P +P S S ATPPP P P + P +P R L
Sbjct: 705 QVPPSPPASPPMSPS-ATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPL--L 761
Query: 245 AAPSVAFSGDVTLSLERGPASAKPPPQV--------LTAEPREDAT-PGEGRLPDFEKQP 295
AAP + SL P AKPPPQ L A P A+ PG+ P
Sbjct: 762 AAPPLQVPPSPPASLPMSPL-AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 820
Query: 296 HSPRERLDPPPAP 308
SP PP AP
Sbjct: 821 MSPL-ATPPPQAP 832
Score = 46.2 bits (108), Expect = 6e-05
Identities = 92/326 (28%), Positives = 107/326 (32%), Gaps = 83/326 (25%)
Query: 82 PLLRYPPE-PGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKT 140
PL PP+ P V +L PP SPPA A R P P TS G R T
Sbjct: 823 PLATPPPQAPPVLAAPLLQVPP------SPPASPTLQAPRRPPTPGPD---TSVSGPRLT 873
Query: 141 RPAGRGGGRTRRVVAAPESAAAAPGRSPS-----PADPGSTSSATRVPRARRSSRRALQP 195
+A P RSPS P G +SSAT P R
Sbjct: 874 -------------LALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGY------ 914
Query: 196 RHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDV 255
+ P+ A A+PPP A P SR AP +AF G
Sbjct: 915 -DSGPEGGAA-------ASPPPDAELAACH----PAAWSR--------GPAPPLAFRGAP 954
Query: 256 TLSLE----RGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQ 311
L GP SA + E E ATP G LDP P+P
Sbjct: 955 GAPLPWPPATGPGSADGLCTIYETEGPESATPAPG--------------ALDPGPSPGTS 1000
Query: 312 MILILGFRVGRGGTGSWSWR--RGAGSAELP-GCSCAQLAQQ-LARAGKSTESRNRLNGR 367
G + G S R + A ELP G A + Q L+R + G
Sbjct: 1001 -----GGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGS 1055
Query: 368 RGGVEARGGGG--GVARAERDDVLQG 391
GG GGG G ARA D G
Sbjct: 1056 GGGPGGAEGGGVTGGARAALSDAELG 1081
Score = 41.2 bits (95), Expect = 0.002
Identities = 62/236 (26%), Positives = 81/236 (34%), Gaps = 45/236 (19%)
Query: 48 NDMGTLEPTPLLRRKAA-----QLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPP 102
++ T EP+P RR+ + Q R S A + P P G P
Sbjct: 213 SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT---------P 263
Query: 103 FAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGG--GRTRRVVAAPESA 160
AP S P P+ A R P P A G + P G R V P++A
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNA 323
Query: 161 AAAPGRSPSPAD-PGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAP 219
A +P PA P S AT +P AP +P AP S T P P
Sbjct: 324 A-----TPLPATLPPSPPLATPLP--------------LAPPSPSAP---PSLQTLPSPP 361
Query: 220 RFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTA 275
P S+ P P + + Q P + V SL A P P L++
Sbjct: 362 ATPPSQAP--PSMTTPPMQAPPSLQTIPPI----QVPHSLTSPSLQAPPSPLALSS 411
Score = 37.4 bits (85), Expect = 0.029
Identities = 55/203 (27%), Positives = 77/203 (37%), Gaps = 26/203 (12%)
Query: 104 APGRISPPAPQAFLAQRSPARASPGG----GFTSAEGKRK-TRPAGRGGGRTRRVVAAPE 158
APG ++P P + R P +P G A G++ AG GG T PE
Sbjct: 21 APGLLTPRPPGS---PRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT-----IPE 72
Query: 159 SAA-AAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPP 217
SA A P RS A S + A+R P + R R A ++ +P +P R++ T P
Sbjct: 73 SAPRAGPTRS---AGTSSRNPASRPPASGRGER-APPAKNTSPGPVSSPGRAS--GTTRP 126
Query: 218 APRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
P R A ++R + E +A S D + GP P P +
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTS-----GPTPGTPSPAMARRSR 181
Query: 278 REDATPGEGRLPDFEKQPHSPRE 300
G R P +P P E
Sbjct: 182 AAGTEVGLPR-PAPSARPRPPTE 203
Score = 36.6 bits (83), Expect = 0.049
Identities = 40/153 (26%), Positives = 49/153 (32%), Gaps = 11/153 (7%)
Query: 157 PESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP 216
P A +P +P P P S AT P+A P A+P G PS S P
Sbjct: 568 PLQAPPSPLTTPPPETPSSI--ATPPPQA--------PPALASPPLQGLPSPPLSPLATP 617
Query: 217 PAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKP-PPQVLTA 275
P P P S L A PS + + L + P S P PP
Sbjct: 618 PPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 276 EPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
P P + P L PP+P
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710
Score = 31.6 bits (70), Expect = 1.6
Identities = 70/291 (24%), Positives = 89/291 (30%), Gaps = 56/291 (19%)
Query: 198 AAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRT----------RQRELGGSAAP 247
AA P A + PP +PR P P A R+L R +GG+ P
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIP 71
Query: 248 SVAFSGDVTLSL---ERGPASAKPPP-QVLTAEPREDATPGEGRLPDFEKQPHSPRERLD 303
A T S R PAS P + A P ++ +PG P R
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPG--------RASGT 123
Query: 304 PPPAPFGQMILILGFR--VGRGGTGSWSWR-------RGAGSAELPGCSCAQLAQQLARA 354
P P GQ L + V RG R R S PG +A++ A
Sbjct: 124 TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Query: 355 GKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRR 414
G R G V+ A + ARR P G++R
Sbjct: 184 GTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE-------PSPAARRRPSAGGGLQR 236
Query: 415 GAA-----------------PGFRGSSNTARRRSIPVSLNRAQALCPPQST 448
A+ P RG+ S P QAL PPQ T
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP-KPKGLQALRPPQVT 286
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 55.1 bits (131), Expect = 1e-07
Identities = 73/241 (30%), Positives = 88/241 (36%), Gaps = 46/241 (19%)
Query: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTR--------R 152
P G +PPA SP S G A G + P G+ G R +
Sbjct: 95 PASGRGERAPPAKNT-----SPGPVSSPG---RASGTTRPGPLGQKGLRISAEETVARGK 146
Query: 153 VVAAPESAAAAPG--RSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAP---- 206
AP+ +A + G R S PG+ S A R+R + PR A P P
Sbjct: 147 ATEAPKRSALSAGARRDTSGPTPGTPSPAM-ARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 207 ----SRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAP--SVAFSGDVTLSLE 260
S ++ +T P+P A RRP A L R R L SA P S A SG
Sbjct: 206 RKSVSSASEHSTTEPSPA--ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP 263
Query: 261 RGPA----------SAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLD---PPPA 307
R PA A PPQV PR+DA P G L SP L PP
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQV--TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTL 321
Query: 308 P 308
P
Sbjct: 322 P 322
Score = 50.8 bits (120), Expect = 3e-06
Identities = 60/229 (26%), Positives = 83/229 (36%), Gaps = 32/229 (13%)
Query: 102 PFAPGRISPPAPQAFLAQR----SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAP 157
P A G + PA ++ + SPAR+ P T ++P +G R P
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 287
Query: 158 ESAAAAPG---------RSPSPADPGSTSSATRVPRARRSSRRALQ---PRHAAPDAPGA 205
AAP +PSP+ + + +P SS Q P AP +P A
Sbjct: 288 PRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA 347
Query: 206 PSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPAS 265
P + +PP P A+ G+P L + S PS S T + PA
Sbjct: 348 PPSLQTLPSPPATPPSQATTSLGSPTL-------QATHSFLPSPPLSPLATPPPQAPPAL 400
Query: 266 AKPPPQVLTAEPREDATPGEGRLPDFEKQP------HSPRERLDPPPAP 308
A PP L A P A+P L Q H + PPP+P
Sbjct: 401 ALPP---LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 446
Score = 49.3 bits (116), Expect = 7e-06
Identities = 97/376 (25%), Positives = 120/376 (31%), Gaps = 76/376 (20%)
Query: 57 PLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAF 116
P L Q+ P S +A P + PP P + PP AP ++ P QA
Sbjct: 472 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 531
Query: 117 LAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAP----------ESAAAAPGR 166
SP + PG S P + V+AAP AP R
Sbjct: 532 ---PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR 588
Query: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
P+P P ++ S R+ A AP P PSRS S P +S
Sbjct: 589 PPTPG-PDTSVSGPRLTLA------------LAPGPPPPPSRSPSSTLSGPDLAGHSSSA 635
Query: 227 PGAPRLLSRTRQRELGGSA---------------------APSVAFSGDVTLSL----ER 261
P L GG+A AP +AF G L
Sbjct: 636 TSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPAT 695
Query: 262 GPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVG 321
GP SA + E E ATP G LDP P+P G +
Sbjct: 696 GPGSADGLCTIYETEGPESATPAPG--------------ALDPGPSPGTS-----GGKAA 736
Query: 322 RGGTGSWSWR--RGAGSAELP-GCSCAQLAQQ-LARAGKSTESRNRLNGRRGGVEARGGG 377
G S R + A ELP G A + Q L+R + G GG GG
Sbjct: 737 AGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGG 796
Query: 378 G--GVARAERDDVLQG 391
G G ARA D G
Sbjct: 797 GVTGGARAALSDAELG 812
Score = 47.8 bits (112), Expect = 2e-05
Identities = 66/287 (22%), Positives = 87/287 (30%), Gaps = 40/287 (13%)
Query: 48 NDMGTLEPTPLLRRKAA-----QLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPP 102
++ T EP+P RR+ + Q R S A + P P G P
Sbjct: 213 SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGT---------P 263
Query: 103 FAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAA 162
AP S P P+ A R P P A G + P AP + A
Sbjct: 264 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPA 323
Query: 163 APGRS--------------PSPADPGSTSSATRVPRARRSSRRA------LQPRHAAPDA 202
P S PSP+ P S + P S LQ H+ +
Sbjct: 324 TPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 383
Query: 203 PGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERG 262
P +T PPA P + P +P L A PS + + L +
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQAPPSP-----PASPPLSPLATPSPQAPNALAVHLLQA 438
Query: 263 PASAKP-PPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
P S P PP P P + P L PP+P
Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 485
Score = 44.3 bits (103), Expect = 2e-04
Identities = 73/264 (27%), Positives = 85/264 (32%), Gaps = 84/264 (31%)
Query: 80 ALPLLRYPPEPGVFPFLVLWTPPFAP-GRISPPAPQAFLAQRSPARASPGGGFTSAEGKR 138
ALP L+ PP P +PP +P SP AP A A SP
Sbjct: 401 ALPPLQAPPSPPA-------SPPLSPLATPSPQAPNALAVHLLQAPFSPPPS-------- 445
Query: 139 KTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHA 198
V AP S A+P SPS P + P P
Sbjct: 446 -------------PPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-----------PLQV 481
Query: 199 APDAPGAPSRSTSQATPPPAPRFP--------ASRRPGAPRLLSRTRQRELGGSAAPSVA 250
P P +P S S ATPPP P A P AP L+ + L +P +
Sbjct: 482 PPSPPASPPMSPS-ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL---PSPPAS 537
Query: 251 FSGDV----TLSLERGPASAKPP--PQVLTA----------------EPREDATPGEGRL 288
F G + SL P + PP P VL A PR TPG
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG---- 593
Query: 289 PDFEKQPHSPRERL----DPPPAP 308
PD PR L PPP P
Sbjct: 594 PD--TSVSGPRLTLALAPGPPPPP 615
Score = 37.4 bits (85), Expect = 0.029
Identities = 55/203 (27%), Positives = 77/203 (37%), Gaps = 26/203 (12%)
Query: 104 APGRISPPAPQAFLAQRSPARASPGG----GFTSAEGKRK-TRPAGRGGGRTRRVVAAPE 158
APG ++P P + R P +P G A G++ AG GG T PE
Sbjct: 21 APGLLTPRPPGS---PRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT-----IPE 72
Query: 159 SAA-AAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPP 217
SA A P RS A S + A+R P + R R A ++ +P +P R++ T P
Sbjct: 73 SAPRAGPTRS---AGTSSRNPASRPPASGRGER-APPAKNTSPGPVSSPGRAS--GTTRP 126
Query: 218 APRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
P R A ++R + E +A S D + GP P P +
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTS-----GPTPGTPSPAMARRSR 181
Query: 278 REDATPGEGRLPDFEKQPHSPRE 300
G R P +P P E
Sbjct: 182 AAGTEVGLPR-PAPSARPRPPTE 203
Score = 31.6 bits (70), Expect = 1.6
Identities = 70/291 (24%), Positives = 89/291 (30%), Gaps = 56/291 (19%)
Query: 198 AAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRT----------RQRELGGSAAP 247
AA P A + PP +PR P P A R+L R +GG+ P
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIP 71
Query: 248 SVAFSGDVTLSL---ERGPASAKPPP-QVLTAEPREDATPGEGRLPDFEKQPHSPRERLD 303
A T S R PAS P + A P ++ +PG P R
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPG--------RASGT 123
Query: 304 PPPAPFGQMILILGFR--VGRGGTGSWSWR-------RGAGSAELPGCSCAQLAQQLARA 354
P P GQ L + V RG R R S PG +A++ A
Sbjct: 124 TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Query: 355 GKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRR 414
G R G V+ A + ARR P G++R
Sbjct: 184 GTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE-------PSPAARRRPSAGGGLQR 236
Query: 415 GAA-----------------PGFRGSSNTARRRSIPVSLNRAQALCPPQST 448
A+ P RG+ S P QAL PPQ T
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP-KPKGLQALRPPQVT 286
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 54.7 bits (130), Expect = 2e-07
Identities = 82/302 (27%), Positives = 106/302 (35%), Gaps = 40/302 (13%)
Query: 73 SCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLA----QRSPARASPG 128
SC + AA P + PP P P P APG +P P+ + +R+ PG
Sbjct: 895 SCCSAEAAPPPAKPPPPPQPLPSPAYPAPRPAPGP-APFVPRERASVDRWRRTKGAGPPG 953
Query: 129 G-----GFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVP 183
G GF G + + G G G R AAP AA P SP A P +
Sbjct: 954 GAGLADGFHRYYGPIEPQGLGLGLGEAR---AAPRGAAGRP-LSPPAAQPPQKPPPSYFA 1009
Query: 184 RARRSSRRALQPRHAAPD--APGAPSRSTSQATPPPAPRFP-ASRRPGAPRLLSRT--RQ 238
R A P A P +P AP + + A PP R P AP R+
Sbjct: 1010 IVR-DKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRSDPES 1068
Query: 239 RELGGSAAPSVAFSGDVTLSLERGPA---SAKPPPQVLTAEPREDATPGEGRLPD----- 290
+ L G A +G P +A PP L EP + L
Sbjct: 1069 QPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPPCPYLDLEPSPSDSEDSESLGGASLGG 1128
Query: 291 -----FEKQPHSPRERLDPPPAPFGQMILILGFRVG-------RGGTGSWSWRRGAGSAE 338
F P+ ERL PPP + + + G+R G R G +W R A
Sbjct: 1129 LEPWWFADFPYPYAERLGPPPGRYWSVDKLGGWRAGSWDYLPPRSGPAAWHCRHCASLEL 1188
Query: 339 LP 340
LP
Sbjct: 1189 LP 1190
Score = 32.7 bits (73), Expect = 0.71
Identities = 55/217 (25%), Positives = 66/217 (30%), Gaps = 44/217 (20%)
Query: 155 AAPESAAAAPGRSP--SPADPG---STSSATRVPRARRSSRRALQPRHAAPDAPGAPSRS 209
AAP A P P SPA P + A VPR R S R + + A P +
Sbjct: 901 AAPPPAKPPPPPQPLPSPAYPAPRPAPGPAPFVPRERASVDRWRRTKGAGPPGGAGLADG 960
Query: 210 TSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPP 269
+ P P+ G L R G + P LS KPP
Sbjct: 961 FHRYYGPIEPQ-------GLGLGLGEARAAPRGAAGRP---------LSPPAAQPPQKPP 1004
Query: 270 PQVLT-AEPREDATPGEGRLPDFEKQPHSPRERL--------------DPPPAPF----- 309
P +E A P G P F P P + PPAP
Sbjct: 1005 PSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDESPPAPARWPRS 1064
Query: 310 -GQMILILGFRVGRGGTGSWSWRRGAGSAELPGCSCA 345
+ +LG G GG G G A P C A
Sbjct: 1065 DPESQPLLG--PGAGGAGGTGGAGGGAPAAPPPCRAA 1099
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 53.5 bits (127), Expect = 4e-07
Identities = 65/242 (26%), Positives = 89/242 (36%), Gaps = 31/242 (12%)
Query: 100 TPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAA--P 157
+PP+ PG PP+ + SP PG G + + P + R V+ P
Sbjct: 685 SPPWTPGASRPPS--SLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRP 742
Query: 158 ESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPP 217
E+ A P R + +A R A S A PR +P P AP PPP
Sbjct: 743 ETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSP--PRAPPPPPPPPPPPP 800
Query: 218 APRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
R P RPG+ +A P AF+ L GP+S P L A P
Sbjct: 801 RMRSPQPARPGS--------------AAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPP 846
Query: 278 REDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRV-GRGGTGSWSWRRGAGS 336
R + + P LD + + ILG+ + RG GS +RG+
Sbjct: 847 RPFL---------YRRSPTDSDVSLDSEDSG-AKSPGILGYNICPRGWNGSLRLKRGSLP 896
Query: 337 AE 338
AE
Sbjct: 897 AE 898
Score = 31.2 bits (69), Expect = 2.1
Identities = 37/132 (28%), Positives = 43/132 (32%), Gaps = 17/132 (12%)
Query: 154 VAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQA 213
+A P S R PG TS R P R R + AP P P RS
Sbjct: 229 LAKPPSVVNRTARPFGIQAPGGTSQMERSPMLER---RHFGEKAPAPQPPSLPDRS---- 281
Query: 214 TPPPAPRFPASRRPGAPRLLSRTR-----QRELGGSAAPSVAFSGDVTLSLERGPASAKP 268
P R SR P R + R +R LG AP TLS + +
Sbjct: 282 --PRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTE---TLSTAPLASWVRS 336
Query: 269 PPQVLTAEPRED 280
PP P D
Sbjct: 337 PPSYSVLYPSSD 348
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 53.1 bits (126), Expect = 5e-07
Identities = 66/196 (33%), Positives = 81/196 (41%), Gaps = 38/196 (19%)
Query: 96 LVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRG--GGRTRRV 153
L+L PP P + +A QR P G + T P G GGR +
Sbjct: 149 LLLELPPRPPPNLQEGGQRAIF-QRPPVYL----------GNKPTPPRQEGSFGGRPKSQ 197
Query: 154 VAAPESAAAA---PGRSPSPA---DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPS 207
P+ AA PG + PA +PG A+R PR R SR A P AP PGA S
Sbjct: 198 PPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLR--SRAARPP--PAP-GPGALS 252
Query: 208 R-STSQATPPPAPRFPASRRPGAPRLLSRTRQRE---LGGSAAPSVA------FSGDVTL 257
R S S+A P P F + APR R LG +A PS A SG T+
Sbjct: 253 RASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATV 312
Query: 258 SLERG----PASAKPP 269
L RG S++PP
Sbjct: 313 GLRRGDCDRAGSSQPP 328
Score = 41.2 bits (95), Expect = 0.002
Identities = 68/252 (26%), Positives = 84/252 (33%), Gaps = 79/252 (31%)
Query: 67 QPGRGKSCGAR-----RAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRS 121
+PGR + RAA P PP PG PG +S A RS
Sbjct: 222 EPGRAEGASREPRLRSRAARP----PPAPG-------------PGALSR-------ASRS 257
Query: 122 PARASPGGGFTSAEGKRKTRPAGRGGGRTRRVV--AAPESAAAAPG-------------- 165
A PG GF E R G GGGR + AAP S A
Sbjct: 258 RAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRG 317
Query: 166 ---RSPSPADPGSTSSATRVPRARRSSRRA----LQPRHA--APDAP------------- 203
R+ S P ++ + R RR RR + HA P +P
Sbjct: 318 DCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAV 377
Query: 204 -----GAPSRSTSQATPPPAPRFPASRRPGAPRLL-----SRTRQRELGGSAAPSVAFSG 253
G SR Q TPPP A +R G R L S TR G++ P +
Sbjct: 378 LRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMV--A 435
Query: 254 DVTLSLERGPAS 265
D T + R P +
Sbjct: 436 DQTSGISRPPTA 447
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 52.4 bits (124), Expect = 9e-07
Identities = 56/221 (25%), Positives = 78/221 (35%), Gaps = 21/221 (9%)
Query: 82 PLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTR 141
P PP PGV P P P + PAP F P P G A G +
Sbjct: 436 PFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPF-----PIELLPLGYSEPAFGPCFSM 490
Query: 142 PAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPD 201
P G+ + R A A SP P GS + +AL+P +
Sbjct: 491 PRGKPPAPSPRGQKASPPTLAPATASP-PTTAGSNNPCLTQLLTAAKPEQALEPPLVSST 549
Query: 202 ---APGAPSRS-----------TSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAP 247
+PG+P + T TPP P PA+ P P L+ + + +
Sbjct: 550 LLRSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGS 609
Query: 248 SVAFSGDVTLSLERGPASAK-PPPQVLTAEPREDATPGEGR 287
SGD++ G S + PPQ + + R D+ E R
Sbjct: 610 ERRLSGDLSSMPGPGTLSVRVSPPQPILSRGRPDSNKTENR 650
Score = 30.4 bits (67), Expect = 3.5
Identities = 41/161 (25%), Positives = 57/161 (35%), Gaps = 31/161 (19%)
Query: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP--PAPRFPASRRP 227
P P ++S+ T + S LQ R++ P + + +S P P PR P P
Sbjct: 338 PEVPPASSAMTHL-----SGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLPPP--P 390
Query: 228 GAPRLLSRTRQRELGG----------SAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
P LL ++ G AP A + L R P PP
Sbjct: 391 VPPPLLHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPP-------- 442
Query: 278 REDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGF 318
PG LP P +P+ P P PF +L LG+
Sbjct: 443 ----APGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGY 479
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 52.4 bits (124), Expect = 9e-07
Identities = 56/221 (25%), Positives = 78/221 (35%), Gaps = 21/221 (9%)
Query: 82 PLLRYPPEPGVFPFLVLWTPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTR 141
P PP PGV P P P + PAP F P P G A G +
Sbjct: 436 PFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPF-----PIELLPLGYSEPAFGPCFSM 490
Query: 142 PAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPD 201
P G+ + R A A SP P GS + +AL+P +
Sbjct: 491 PRGKPPAPSPRGQKASPPTLAPATASP-PTTAGSNNPCLTQLLTAAKPEQALEPPLVSST 549
Query: 202 ---APGAPSRS-----------TSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAP 247
+PG+P + T TPP P PA+ P P L+ + + +
Sbjct: 550 LLRSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGS 609
Query: 248 SVAFSGDVTLSLERGPASAK-PPPQVLTAEPREDATPGEGR 287
SGD++ G S + PPQ + + R D+ E R
Sbjct: 610 ERRLSGDLSSMPGPGTLSVRVSPPQPILSRGRPDSNKTENR 650
Score = 30.4 bits (67), Expect = 3.5
Identities = 41/161 (25%), Positives = 57/161 (35%), Gaps = 31/161 (19%)
Query: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP--PAPRFPASRRP 227
P P ++S+ T + S LQ R++ P + + +S P P PR P P
Sbjct: 338 PEVPPASSAMTHL-----SGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLPPP--P 390
Query: 228 GAPRLLSRTRQRELGG----------SAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
P LL ++ G AP A + L R P PP
Sbjct: 391 VPPPLLHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPP-------- 442
Query: 278 REDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGF 318
PG LP P +P+ P P PF +L LG+
Sbjct: 443 ----APGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGY 479
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 52.4 bits (124), Expect = 9e-07
Identities = 77/353 (21%), Positives = 131/353 (37%), Gaps = 49/353 (13%)
Query: 107 RISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGR 166
R + PAP++ A RS + S TS + ++R A T +P A+ G
Sbjct: 249 RSTTPAPKSRRAHRSTSADSASSSDTS---RSRSRSAAAKTHTTALAGRSPSPASGRRGE 305
Query: 167 SPSP-ADPGSTSS--------ATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPP 217
+P ++PG+TS+ AT+ P + + + +A +P RS++ PP
Sbjct: 306 GDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPA 365
Query: 218 APRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEP 277
A R G+P+ L+ T + V + + + +R P + P+ L
Sbjct: 366 PTPLLAERHGGSPQPLATTPLSQ------EPVNPPSEASPTRDRSPPKS---PEKLPQSS 416
Query: 278 REDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRGAGSA 337
+++P + + S E P PAP + + S R G A
Sbjct: 417 SSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREI---------SSSPTSKNRSHGRA 467
Query: 338 ELPGCSCAQLAQQLARA-----GKSTESRNRLNGRRGGVEARGGGGGVARAERDDVLQGL 392
+ ++++ R+ K SR+R +RG +R Q
Sbjct: 468 KRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSP-------------QWR 514
Query: 393 GLRGTEDWCARRAPRTSSGVRRGAAPGFRGSSNTARR-RSIPVSLNRAQALCP 444
R + W R+P+ R PG+ S NT RR RS R+ + P
Sbjct: 515 RSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567
Score = 52.4 bits (124), Expect = 9e-07
Identities = 86/368 (23%), Positives = 134/368 (36%), Gaps = 81/368 (22%)
Query: 113 PQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPAD 172
P A +RS + +SP + K KTR R R+ + +P RS S +
Sbjct: 1549 PSASPQERSESDSSP-------DSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSS 1601
Query: 173 PGSTSSATRVPRARRSSRRALQPRHAAPDA---------------PGAPSRSTSQATPPP 217
P PRA+ S + +P+ AP A P S+++++P
Sbjct: 1602 PEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEH 1661
Query: 218 APRFPASRRPG----APRLLSRTRQRELGGSAAPSV------------AFSGDVTLSLER 261
P+ +RR P+ SRT R ++P + A S T S R
Sbjct: 1662 PPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS--R 1719
Query: 262 GPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPR----ERLDPPPAPFGQMILILG 317
P + P V + EP E + R + SPR R P+P + +
Sbjct: 1720 TPPRHRRSPSVSSPEPAEKSRSSRRR-----RSASSPRTKTTSRRGRSPSPKPRGLQRSR 1774
Query: 318 FRVGRGGTGSWSWRRGAGSAELPGCSCAQLAQQLARAGKSTESRNRLNGRRGGVEARGGG 377
R R T + R +GS +Q +R + + SR+R+ RR RGG
Sbjct: 1775 SRSRREKTRTTRRRDRSGS-----------SQSTSRRRQRSRSRSRVTRRR-----RGGS 1818
Query: 378 GGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRRGAAPGFRGSSNTARRRSIPVSLN 437
G +R+ + + RTSS RRG + S +R R+ P
Sbjct: 1819 GYHSRSP----------------ARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWK 1862
Query: 438 RAQALCPP 445
R+++ P
Sbjct: 1863 RSRSRASP 1870
Score = 45.1 bits (105), Expect = 1e-04
Identities = 56/224 (25%), Positives = 82/224 (36%), Gaps = 31/224 (13%)
Query: 106 GRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG 165
G +S PAP + AS G SA + R + ++ S++++
Sbjct: 2492 GMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSS 2551
Query: 166 RSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPG---APSRSTSQATPP-PAP-- 219
S S S S + +P +QP A P AP + + PP P P
Sbjct: 2552 SSSSSGSSSSDSEGSSLP---------VQPEVALKRVPSPTPAPKEAVREGRPPEPTPAK 2602
Query: 220 ---RFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVL--T 274
R +S + S + S++ S + S + S P+ AKP PQ L
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKP 2662
Query: 275 AEPREDATPGEGR----------LPDFEKQPHSPRERLDPPPAP 308
A P++ PGE R L D +SP ER P P P
Sbjct: 2663 ASPKK-PPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQP 2705
Score = 40.0 bits (92), Expect = 0.004
Identities = 80/334 (23%), Positives = 117/334 (35%), Gaps = 53/334 (15%)
Query: 120 RSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSA 179
RSP R R RG R+ R + + A GRS S S
Sbjct: 526 RSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSR 585
Query: 180 TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQR 239
+R P RRS R R + P RS S+ PA R +R P R SR+ R
Sbjct: 586 SRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRT---PARRRSRTRSPVRRRSRSRSPAR 642
Query: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDFEKQPHSPR 299
G S + + A RG + ++ P + GR S R
Sbjct: 643 RSGRSRSRTPA---------RRGRSRSRTPAR-------------RGRSRSRTPARRSGR 680
Query: 300 ERLDPPPAPFGQMILILGFRVGRGGTGSWSWRRG---AGSAELPGCSCAQLAQQLARAGK 356
R P RG + S + RRG + S G S ++ Q+ R+G
Sbjct: 681 SRSRTP--------------ARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGS 726
Query: 357 STESRNRLNGRRGGVEARGGGGGVARAERDDVLQGLGLRGTEDWCARRAPRTSSGVRR-- 414
S+E +N+ R +R + R + L R ++ +RR
Sbjct: 727 SSERKNK--SRTSQRRSRSNSSPEMKKSRISSRRSRSLSS-----PRSKAKSRLSLRRSL 779
Query: 415 -GAAPGFRGSSNTARRRSIPVSLN-RAQALCPPQ 446
G++P + S T RRS S +A++ PP+
Sbjct: 780 SGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPR 813
Score = 40.0 bits (92), Expect = 0.004
Identities = 40/145 (27%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
Query: 111 PAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPS- 169
PA + R+PAR T A + ++R R R+R S + P R S
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSR 626
Query: 170 PADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASR-RPG 228
P S +R P R R+ P P+R + PA R SR R
Sbjct: 627 TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Query: 229 APRLLSRTRQRELGGSAAPSVAFSG 253
A R SR+R G S + S+ G
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSLVRRG 711
Score = 38.1 bits (87), Expect = 0.017
Identities = 90/368 (24%), Positives = 129/368 (35%), Gaps = 54/368 (14%)
Query: 107 RISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGR 166
R S +P+ R+P R +S TR A R R+R ++PE+ + P R
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRR-----SSRSSPELTRKA-RLSRRSRSASSSPETRSRTPPR 1723
Query: 167 --------SPSPADPGSTSSATR---VPRARRSSRRALQPRHAAPDAPGAPSRSTSQATP 215
SP PA+ +S R PR + +SRR P + SRS + T
Sbjct: 1724 HRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Query: 216 PPAPR------FPASRRPGAPRLLSRTRQRELGGSA--APSVAFSGDVTLSLERGPASAK 267
R SRR R SR +R GGS + S A S R ++
Sbjct: 1784 TTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843
Query: 268 PPPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGS 327
PP R +P + P + R P ++ R R T
Sbjct: 1844 TPP-TSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTP--------LISRRRSRSRTSP 1894
Query: 328 WSWRRGAGSAELPGCSCAQLAQQLARAGKSTESRNRLNGRRGGVEARGGGGGV------A 381
S RR S + ++ +R+ S SR R R V R +
Sbjct: 1895 VSRRRSR--------SRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946
Query: 382 RAERDDVLQGLGLRGTEDWCARRA-PRTSSGVRRGAAPGFRGSSNTARR---RSIPVSLN 437
R+ V + T RR+ RTS RR + R S T RR R+ PV+
Sbjct: 1947 RSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRS--RTSPVTRRRSRSRTSPVTRR 2004
Query: 438 RAQALCPP 445
R+++ P
Sbjct: 2005 RSRSRTSP 2012
Score = 38.1 bits (87), Expect = 0.017
Identities = 52/199 (26%), Positives = 68/199 (34%), Gaps = 12/199 (6%)
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
AP A LA R PA ++ SA RT P +AAA SP A
Sbjct: 2223 APAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRT------PAAAAAMNLASPRTA 2276
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFP-ASRRPGAP 230
SA + R + A+ A A A T TPP A +P +SR P AP
Sbjct: 2277 ---VAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAP 2333
Query: 231 RLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP--GEGRL 288
+ R +A ++A S SA+ P + A P R+
Sbjct: 2334 ASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERV 2393
Query: 289 PDFEKQPHSPRERLDPPPA 307
P R R PP+
Sbjct: 2394 SGRTSPPLLDRARSRTPPS 2412
Score = 37.7 bits (86), Expect = 0.022
Identities = 46/172 (26%), Positives = 62/172 (36%), Gaps = 10/172 (5%)
Query: 100 TPPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPES 159
TPP R S +RS +R SP T + +T P R R+R +P +
Sbjct: 1962 TPPVTRRR-SRSRTSPITRRRSRSRTSP---VTRRRSRSRTSPVTRRRSRSR---TSPVT 2014
Query: 160 AAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQAT-PPPA 218
+ R+P S S +PR R SR L R + +R T PPA
Sbjct: 2015 RRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 2074
Query: 219 PRFPASRRPGAPRLLSRT--RQRELGGSAAPSVAFSGDVTLSLERGPASAKP 268
R ++ + R S T R GS P VA + R S P
Sbjct: 2075 IRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTP 2126
Score = 36.2 bits (82), Expect = 0.064
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 24/140 (17%)
Query: 119 QRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP------GRSPSPAD 172
+RS +RASP + + +T P R R+R S + P RS +P
Sbjct: 1909 RRSRSRASP---VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV 1965
Query: 173 PGSTSSATRVPRARRSSRRALQP----RHAAPDAPGAPSRSTSQA-----------TPPP 217
S + P RR SR P R + +P RS S+ TPP
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 2025
Query: 218 APRFPASRRPGAPRLLSRTR 237
R SR P PR SR+R
Sbjct: 2026 IRRRSRSRTPLLPRKRSRSR 2045
Score = 35.8 bits (81), Expect = 0.083
Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 28/200 (14%)
Query: 106 GRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG 165
GR +P LA RSP R G+ P + G +PE +
Sbjct: 1097 GRSRSSSPVTELASRSPIRQD--------RGEFSASPMLKSG-------MSPEQSRFQSD 1141
Query: 166 RSPSPA-DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
S P D S +R+ A + AL P+ DA +P R + +P P P S
Sbjct: 1142 SSSYPTVDSNSLLGQSRLETAESKEKMALPPQE---DATASPPRQKDKFSPFPVQDRPES 1198
Query: 225 RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLS------LERGPASAKPPPQV---LTA 275
L + R+R GS+ + + + S +E S +P Q+ L++
Sbjct: 1199 SLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEPAGQILSHLSS 1258
Query: 276 EPREDATPGEGRLPDFEKQP 295
E +E +T P+ E++P
Sbjct: 1259 ELKEMSTSNFESSPEVEERP 1278
Score = 35.8 bits (81), Expect = 0.083
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 19/160 (11%)
Query: 149 RTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSR 208
R RR ++ S++++ S S + S+SS++ + SS + P A P P A +
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP-GPQALPK 2661
Query: 209 STSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKP 268
S PPP R SR P P + S R L S +ER S +P
Sbjct: 2662 PASPKKPPPGER--RSRSPRKP-IDSLRDSRSLSYS-------------PVERRRPSPQP 2705
Query: 269 PPQVLTAEPREDATPGEGRLPDFEKQPHSPRERLDPPPAP 308
P+ + E + G+ D + P R R P P P
Sbjct: 2706 SPRDQQSSSSERGS-RRGQRGD-SRSPSHKRRRETPSPRP 2743
Score = 35.0 bits (79), Expect = 0.14
Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 21/142 (14%)
Query: 106 GRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG 165
G +PP + + +A T P G RT +A P S +A
Sbjct: 2313 GSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALA-PASLTSA-- 2369
Query: 166 RSPSPADPGSTSSATRVPRA--RRSSRRALQP-----RHAAPDAPGAPSRSTSQATPPPA 218
+PA G+ ++ RVP + R S R P R P + + SR TS+ P P+
Sbjct: 2370 -RMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPS 2428
Query: 219 PRF----------PASRRPGAP 230
R PA +P +P
Sbjct: 2429 SRMGQAPSQSLLPPAQDQPRSP 2450
Score = 34.7 bits (78), Expect = 0.19
Identities = 67/274 (24%), Positives = 89/274 (32%), Gaps = 42/274 (15%)
Query: 28 SNAQFLLRRRGMSKCDKIMCNDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYP 87
S + +RRR S+ + P +RR++A G S R+A P
Sbjct: 2044 SRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS-----GSSSDRSRSATP----- 2093
Query: 88 PEPGVFPFLVLWTPPFA--PGRIS-----PPAPQAFLAQRSPARASPGGG-------FTS 133
P TPP A R+S +P RSP P G
Sbjct: 2094 --PATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQ 2151
Query: 134 AEGKRKTRPAGRGGGRTRRVV----AAPESAAAAPGRSPSPADPGSTSSATRVPRARRSS 189
A G P R R V A A A S A P + SA + AR S
Sbjct: 2152 AGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLA-ARMSQ 2210
Query: 190 RRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSV 249
A P + AP A S A A ++R P P ++ R +AA ++
Sbjct: 2211 VPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNL 2270
Query: 250 AFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
A P +A P V A+PR P
Sbjct: 2271 A-----------SPRTAVAPSAVNLADPRTPTAP 2293
Score = 34.3 bits (77), Expect = 0.24
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 23/102 (22%)
Query: 166 RSPSPADPGSTSSATRVP--RARRSSRRALQPRHAAP-------------DAPGAPSRST 210
RS S + P R P R+R S L+ P D P PSR
Sbjct: 1418 RSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGR 1477
Query: 211 SQATPPPAPRF------PASRRPGAPRLLSR--TRQRELGGS 244
S+ P P+ P SR P +P L ++ T QRE GS
Sbjct: 1478 SECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGS 1519
Score = 33.1 bits (74), Expect = 0.54
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 111 PAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGR--GGGRTRRVVAAPESAAAAPGRSP 168
P PQA SP + PG +R++R + R R ++ P P
Sbjct: 2654 PGPQALPKPASPKKPPPG--------ERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQP 2705
Query: 169 SPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAP-RFPASRRP 227
SP D S+SS R +R R +PS + TP P P R +SR P
Sbjct: 2706 SPRDQQSSSSERGSRRGQRGDSR-------------SPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 31.6 bits (70), Expect = 1.6
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 11/203 (5%)
Query: 48 NDMGTLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPP--FAP 105
N ++ + + R++ L R K+ ++ L L R P TPP
Sbjct: 744 NSSPEMKKSRISSRRSRSLSSPRSKA----KSRLSLRRSLSGSSPCPKQKSQTPPRRSRS 799
Query: 106 GRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG 165
G P A +RS + +SP S R++ + + + + + +P
Sbjct: 800 GSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQ 859
Query: 166 RSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASR 225
+ P S P SR RH+ + +P R S P +P +S
Sbjct: 860 ANEQSVTPQRRSCFESSPDPELKSRTP--SRHSCSGS--SPPRVKSSTPPRQSPSRSSSP 915
Query: 226 RPGAPRLLSRTRQRELGGSAAPS 248
+P ++S RQR GS++PS
Sbjct: 916 QPKVKAIIS-PRQRSHSGSSSPS 937
Score = 30.8 bits (68), Expect = 2.7
Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 14/148 (9%)
Query: 106 GRISPPAP-----QAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESA 160
GR P P ++ + S + +S +S+ + + + ++P A
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652
Query: 161 AAAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPR 220
P P PA P + P R SR +P + D+ + P P P
Sbjct: 2653 KPGPQALPKPASP------KKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPS 2706
Query: 221 FPASRRPGAPRLLSRTRQRELGGSAAPS 248
P ++ + SR QR G S +PS
Sbjct: 2707 -PRDQQSSSSERGSRRGQR--GDSRSPS 2731
Score = 30.0 bits (66), Expect = 4.6
Identities = 49/201 (24%), Positives = 68/201 (33%), Gaps = 26/201 (12%)
Query: 107 RISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGR 166
R PA + R+PAR T A R +GR RT S GR
Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPA------RRSGRSRSRTPARRGRSRSRTPRRGR 701
Query: 167 SPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRR 226
S S + S +R P+ R S + + ++ + + RS S ++P +SRR
Sbjct: 702 SRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRT---SQRRSRSNSSPEMKKSRISSRR 758
Query: 227 PGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKP-PPQVLTAEPREDATPGE 285
R LS R + LSL R + + P P Q PR +
Sbjct: 759 ---SRSLSSPRSK-------------AKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSS 802
Query: 286 GRLPDFEKQPHSPRERLDPPP 306
P R PPP
Sbjct: 803 QPKAKSRTPPRRSRSSSSPPP 823
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 52.0 bits (123), Expect = 1e-06
Identities = 62/250 (24%), Positives = 82/250 (32%), Gaps = 45/250 (18%)
Query: 104 APGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKT-------------RPAGRGGGRT 150
+PG SPP P+ ++ PA S + + + AG
Sbjct: 570 SPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTL 629
Query: 151 RRVVAAPESAAAAPGRSPSPADPGSTSSA--------------TRVPRARRSSRRALQPR 196
RR V P A PG +P P PG SS+ TR P +
Sbjct: 630 RRAVKKPAPAPPKPG-NPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQ 688
Query: 197 HAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVT 256
+AP AP R +S +P AP P + P L T+ G ++ +
Sbjct: 689 PSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLE 748
Query: 257 LSLERGPASAKPP--------------PQVLTAEPREDATPGEGRLPDFEKQPHSPRER- 301
P + PP PQ L E A P G LP P PR R
Sbjct: 749 QPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPRPVP-KPRNRP 807
Query: 302 -LDPPPAPFG 310
+ PPP P G
Sbjct: 808 SVPPPPQPPG 817
Score = 48.1 bits (113), Expect = 2e-05
Identities = 62/241 (25%), Positives = 87/241 (36%), Gaps = 37/241 (15%)
Query: 101 PPFAPGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESA 160
PP + P P+ Q S A +S GGG + + G G + +A
Sbjct: 528 PPTDGSTVVPAGPEP-PPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAA 586
Query: 161 AAAPGRSPS---------PADPGSTSSATRVPR-----ARRSSRRALQPRHAAPDAPGAP 206
APGR+ S A GS + P + + RRA++ AP PG P
Sbjct: 587 VPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNP 646
Query: 207 ---------SRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTL 257
S TSQ P +P+ P +R P P T Q SA ++ +
Sbjct: 647 PPGHPGGQSSSGTSQHPPSLSPK-PPTRSPSPP--TQHTGQPPGQPSAPSQLSAPRRYSS 703
Query: 258 SLERGPASAKPPPQ-------VLTAEPREDATPGEGRLPD---FEKQPHSPRERLDPPPA 307
SL A PPPQ ++ +P P LP E+ H+P + PP
Sbjct: 704 SLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPST 763
Query: 308 P 308
P
Sbjct: 764 P 764
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 52.0 bits (123), Expect = 1e-06
Identities = 73/278 (26%), Positives = 101/278 (36%), Gaps = 45/278 (16%)
Query: 51 GTLEPTPLLRRKAAQ------LQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFA 104
G+ P+P L K P G + A AA PP P V P TPP
Sbjct: 127 GSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTA---PPRPNV-PAPPPPTPPPP 182
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P + PP P + ++P + PG P +G VVA P A P
Sbjct: 183 PPPLPPPLPSSSPI-KTPLVSPPG-------------PLTKGN---LPVVAPPVPCAPPP 225
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAP--------GAPSRSTSQATPP 216
P P P A+ + + ++ + L P H P P G P A+P
Sbjct: 226 PPPPPPPTPPPLPPASVL--SDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPA 283
Query: 217 PAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAE 276
+ P + P P S + + L P V S + L S + PPQ A+
Sbjct: 284 QDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQ 343
Query: 277 --PREDATPGEGRLPDFEKQPH----SPRERLDPPPAP 308
P A PG P +K+ H + +L+PPPAP
Sbjct: 344 ALPAPPAPPGSQ--PFLQKKRHGRPGAGGGKLNPPPAP 379
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 51.6 bits (122), Expect = 1e-06
Identities = 41/116 (35%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 142 PAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRR------ALQP 195
P G G P AA PSP PG+ AT P RS RR + P
Sbjct: 9 PGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGA--DATHPPPPARSPRRPGAPSLSPAP 66
Query: 196 RHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE-----LGGSAA 246
R PGAP ST+ A P+P P RRPG P +++R R LGG A
Sbjct: 67 RSGELGLPGAPESSTASAPGEPSPPSPPCRRPG-PDCRAKSRGRHGLGAGLGGPGA 121
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/101 (33%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 169 SPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPG 228
SP GS + P A P +P PGA + PPP R P RRPG
Sbjct: 8 SPGGDGSAGAGAEEPTPHEGQAAATGP--PSPLHPGADATH-----PPPPARSP--RRPG 58
Query: 229 APRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPP 269
AP L R ELG AP + T S P+ PP
Sbjct: 59 APSLSPAPRSGELGLPGAPESS-----TASAPGEPSPPSPP 94
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 51.2 bits (121), Expect = 2e-06
Identities = 88/307 (28%), Positives = 112/307 (36%), Gaps = 61/307 (19%)
Query: 111 PAPQAFLAQRSP-ARASPGGGFTSAE------GKRKTRPAG--RGGGRTRRVVAAPESAA 161
P Q + QR P A SPG + E G T PA R + AAPE AA
Sbjct: 279 PRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAA 338
Query: 162 --AAPGRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAP 219
AAP SPA+ G A +P A+ ++R P AA P +R S PP
Sbjct: 339 PPAAPSPPDSPAE-GRLVKAQYIPGAQAATRGL--PGRAARRKPPPLTRGRSVEQSPPRE 395
Query: 220 RFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPRE 279
R A+ R G R+ + +R G A + S T L R A PP+ TAE
Sbjct: 396 RPRAAGRRG--RMAEASGRR--GSPRARKASRSQSETSLLGRASAVPSGPPKYPTAE--- 448
Query: 280 DATPGEGRLPDFEKQPHSPRERLDPPPAPFGQMILILGFRVGRGGTGSW----------- 328
++P PR R P P Q G W
Sbjct: 449 ------------REEPRPPRPRRGPAPTLAAQ---------AAGSCRRWRSTAEIDAADG 487
Query: 329 -SWRRGAGSAELPGCSCAQLAQQ----LARAGKSTE-SRNRLN--GRRGGVEARGGGGGV 380
R A +A +PG + A Q AG +E S RL GRRG GGG G
Sbjct: 488 RRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGPLGRRGPAGGVGGGYGE 547
Query: 381 ARAERDD 387
+ + +
Sbjct: 548 SESSASE 554
Score = 48.9 bits (115), Expect = 1e-05
Identities = 63/226 (27%), Positives = 80/226 (35%), Gaps = 22/226 (9%)
Query: 102 PFAPGRISPPA--PQAFLAQRSPARASPGG-GFTSAEGKRKTRPAGRGGGRTRRVVAAPE 158
P AP + A P++F A A S G +SAE + + P + +P
Sbjct: 171 PSAPEVVGARAAVPRSFSAPYPTAGGSAGPEACSSAERRARAGPFLTPSPLHAVAMRSPR 230
Query: 159 SAAAAPGRSPSPADPGSTSSATRVPRARRSSRR-ALQPRHAAPDAPGAPSRSTS-QATPP 216
P SP G RR RR A QPR + A G P R S + PP
Sbjct: 231 PCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPP 290
Query: 217 PAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAE 276
A P S RP L R +GG A S S E + A P P A
Sbjct: 291 DASPSPGSARPAREPSLER-----VGGHPTSPAALSRAWASSWE---SEAAPEPAAPPAA 342
Query: 277 PREDATPGEGRLPDFEKQPHSP---------RERLDPPPAPFGQMI 313
P +P EGRL + P + R PPP G+ +
Sbjct: 343 PSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPPLTRGRSV 388
Score = 37.4 bits (85), Expect = 0.029
Identities = 56/228 (24%), Positives = 76/228 (33%), Gaps = 24/228 (10%)
Query: 25 PLGSNAQFLLRRRGMSKCDKIMCNDMGTLEPTPLLRRKAAQLQPGRGKSCG-ARRAALPL 83
PL LLRRR + + G + P + Q P S G AR A P
Sbjct: 248 PLDGYISALLRRRRRRGAGQPRTSPGGA-DGGPRRQNSVRQRPPDASPSPGSARPAREPS 306
Query: 84 LR----YPPEPGVFP--FLVLWTPPFAPGRISPPAPQA----------FLAQRSPARASP 127
L +P P + W AP +PPA + AQ P +
Sbjct: 307 LERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAA 366
Query: 128 GGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARR 187
G +RK P RG + + P A GR A+ + R +A R
Sbjct: 367 TRGLPGRAARRKPPPLTRGRSVEQ---SPPRERPRAAGRRGRMAEASGRRGSPRARKASR 423
Query: 188 SSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSR 235
S A+ G P T++ P PR RR AP L ++
Sbjct: 424 SQSETSLLGRASAVPSGPPKYPTAEREEPRPPR---PRRGPAPTLAAQ 468
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 50.4 bits (119), Expect = 3e-06
Identities = 69/263 (26%), Positives = 94/263 (35%), Gaps = 52/263 (19%)
Query: 82 PLLRYPPEP---GVFPFLVLWTPPFAPGRISP---------PAPQAFLAQRSPARASPGG 129
PL R P+P P+ V TP P + P P P + A + RAS
Sbjct: 79 PLTRVAPQPPGEDDAPYDVPLTPK-PPAELEPDLEWEGGREPGPPIYAAPSNLKRAS--A 135
Query: 130 GFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSS----------- 178
E + G GGG + P AP PSP PG+ +S
Sbjct: 136 LLNLYEAPEELLADGEGGGTDEGIYDVPLLGPEAP---PSPEPPGALASHDQDTLAQLLA 192
Query: 179 -------ATRVPRARRSSRRALQPRHAAPDAPG-------APSRSTS---QATPPPAPRF 221
R+P A SRR L P P+AP AP R S + PPP PR
Sbjct: 193 RSPPPPHRPRLPSAESLSRRPL-PALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRL 251
Query: 222 PASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDA 281
P G P++ RE+ A + ++ E K + + P + A
Sbjct: 252 PGY---GGPKVEGDPEGREMEDDPAGHHNEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQA 308
Query: 282 TPGEGRLPDFEKQPHSPRERLDP 304
G+ LP E+ +P+E L P
Sbjct: 309 CTGDPELP--ERGMPAPQEALSP 329
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 50.4 bits (119), Expect = 3e-06
Identities = 69/263 (26%), Positives = 94/263 (35%), Gaps = 52/263 (19%)
Query: 82 PLLRYPPEP---GVFPFLVLWTPPFAPGRISP---------PAPQAFLAQRSPARASPGG 129
PL R P+P P+ V TP P + P P P + A + RAS
Sbjct: 172 PLTRVAPQPPGEDDAPYDVPLTPK-PPAELEPDLEWEGGREPGPPIYAAPSNLKRAS--A 228
Query: 130 GFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSS----------- 178
E + G GGG + P AP PSP PG+ +S
Sbjct: 229 LLNLYEAPEELLADGEGGGTDEGIYDVPLLGPEAP---PSPEPPGALASHDQDTLAQLLA 285
Query: 179 -------ATRVPRARRSSRRALQPRHAAPDAPG-------APSRSTS---QATPPPAPRF 221
R+P A SRR L P P+AP AP R S + PPP PR
Sbjct: 286 RSPPPPHRPRLPSAESLSRRPL-PALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRL 344
Query: 222 PASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDA 281
P G P++ RE+ A + ++ E K + + P + A
Sbjct: 345 PGY---GGPKVEGDPEGREMEDDPAGHHNEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQA 401
Query: 282 TPGEGRLPDFEKQPHSPRERLDP 304
G+ LP E+ +P+E L P
Sbjct: 402 CTGDPELP--ERGMPAPQEALSP 422
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 50.1 bits (118), Expect = 4e-06
Identities = 45/205 (21%), Positives = 69/205 (33%), Gaps = 8/205 (3%)
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P +P P + PA +P + T P T+ P+ A
Sbjct: 208 PALTTPKEPTP-TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT 266
Query: 165 GRSPSPADPGSTS-SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPA 223
+ P+P P + + T+ P + P+ AP P P+ +T + P P+ P
Sbjct: 267 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 326
Query: 224 SRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
P P ++ AP+ T E P + K P T EP TP
Sbjct: 327 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP-SPTTP 385
Query: 284 GEGRLPDFEKQPHSPRERLDPPPAP 308
E + P + +E PAP
Sbjct: 386 KEPAPTTTKSAPTTTKE-----PAP 405
Score = 44.7 bits (104), Expect = 2e-04
Identities = 59/262 (22%), Positives = 85/262 (32%), Gaps = 48/262 (18%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P ++ A P + + P P EP P P P +P
Sbjct: 423 TKEPAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPA--PTTTKKPAPTTPKEPAPT 477
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P+ A +P + +P T+ E T P + PE A P+P
Sbjct: 478 TPKE-TAPTTPKKLTP----TTPEKLAPTTPE-------KPAPTTPEELAPTTPEEPTPT 525
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-----PAPRFPASRR 226
P + T P+ AAP+ P P+ +T + P PAP P
Sbjct: 526 TPEEPAPTT--------------PKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 571
Query: 227 PGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEG 286
P P+ + T +E + A E P + K P +P G
Sbjct: 572 PTTPKGTAPTTLKEPAPTTPKKPA-------PKELAPTTTKEPTSTTCDKPAPTTPKGTA 624
Query: 287 RLPDFEKQPHSPRERLDPPPAP 308
E P +P+E PAP
Sbjct: 625 PTTPKEPAPTTPKE-----PAP 641
Score = 42.0 bits (97), Expect = 0.001
Identities = 61/261 (23%), Positives = 80/261 (30%), Gaps = 39/261 (14%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P + A P K P P EP T P P +P
Sbjct: 283 TKEPAPTTTKSA----PTTPKEPAPTTPKKPAPTTPKEPAP-------TTPKEPTPTTPK 331
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P + PA +P +A K T P+ A + PSP
Sbjct: 332 EPAP--TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSPT 383
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPR 231
P + T + A +AP P PS +T++ P P+ PA P P
Sbjct: 384 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 442
Query: 232 LLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDF 291
AP+ T E P + K P EP TP E
Sbjct: 443 --------------APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP-APTTPKETAPTTP 487
Query: 292 EKQPHSPRERLDP----PPAP 308
+K + E+L P PAP
Sbjct: 488 KKLTPTTPEKLAPTTPEKPAP 508
Score = 39.3 bits (90), Expect = 0.008
Identities = 51/251 (20%), Positives = 83/251 (33%), Gaps = 27/251 (10%)
Query: 54 EPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAP 113
EPTP + A P K+ P P EP P P P +P P
Sbjct: 521 EPTPTTPEEPAPTTP---KAAAPNTPKEPAPTTPKEPA--PTTPKEPAPTTPKETAPTTP 575
Query: 114 QAFL-------AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVA--APESAAAAP 164
+ A +P + +P + + + + T + A P+ A
Sbjct: 576 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT 635
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
+ P+P P T+ T A + ++ P+ AP P+ +TS P P+ A
Sbjct: 636 PKEPAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKGPTSTTSDKPAPTTPKETAP 694
Query: 225 RRPGAPRLLSRTRQRELGGSAAP------SVAFSGDVTLSLERGP------ASAKPPPQV 272
P P + + P S + ++ + P SA+P P+
Sbjct: 695 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKA 754
Query: 273 LTAEPREDATP 283
L P+E P
Sbjct: 755 LENSPKEPGVP 765
Score = 32.7 bits (73), Expect = 0.71
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 180 TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQR 239
T P+ R ++ +A P+ P AP + TS P PR + PR ++ T
Sbjct: 870 TAKPKDRATNSKATTPKPQKPTK--APKKPTSTKKPKTMPRVRKPKTTPTPRKMTST-MP 926
Query: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPR-EDATPGEGRLPDFEKQPH 296
EL ++ + A T + P +++ P+ EDA EG P +PH
Sbjct: 927 ELNPTSRIAEAMLQTTT------RPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPH 978
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 50.1 bits (118), Expect = 4e-06
Identities = 45/205 (21%), Positives = 69/205 (33%), Gaps = 8/205 (3%)
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P +P P + PA +P + T P T+ P+ A
Sbjct: 249 PALTTPKEPTP-TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT 307
Query: 165 GRSPSPADPGSTS-SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPA 223
+ P+P P + + T+ P + P+ AP P P+ +T + P P+ P
Sbjct: 308 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 367
Query: 224 SRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
P P ++ AP+ T E P + K P T EP TP
Sbjct: 368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP-SPTTP 426
Query: 284 GEGRLPDFEKQPHSPRERLDPPPAP 308
E + P + +E PAP
Sbjct: 427 KEPAPTTTKSAPTTTKE-----PAP 446
Score = 44.7 bits (104), Expect = 2e-04
Identities = 59/262 (22%), Positives = 85/262 (32%), Gaps = 48/262 (18%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P ++ A P + + P P EP P P P +P
Sbjct: 464 TKEPAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPA--PTTTKKPAPTTPKEPAPT 518
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P+ A +P + +P T+ E T P + PE A P+P
Sbjct: 519 TPKE-TAPTTPKKLTP----TTPEKLAPTTPE-------KPAPTTPEELAPTTPEEPTPT 566
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-----PAPRFPASRR 226
P + T P+ AAP+ P P+ +T + P PAP P
Sbjct: 567 TPEEPAPTT--------------PKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 612
Query: 227 PGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEG 286
P P+ + T +E + A E P + K P +P G
Sbjct: 613 PTTPKGTAPTTLKEPAPTTPKKPA-------PKELAPTTTKEPTSTTCDKPAPTTPKGTA 665
Query: 287 RLPDFEKQPHSPRERLDPPPAP 308
E P +P+E PAP
Sbjct: 666 PTTPKEPAPTTPKE-----PAP 682
Score = 42.0 bits (97), Expect = 0.001
Identities = 61/261 (23%), Positives = 80/261 (30%), Gaps = 39/261 (14%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P + A P K P P EP T P P +P
Sbjct: 324 TKEPAPTTTKSA----PTTPKEPAPTTPKKPAPTTPKEPAP-------TTPKEPTPTTPK 372
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P + PA +P +A K T P+ A + PSP
Sbjct: 373 EPAP--TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSPT 424
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPR 231
P + T + A +AP P PS +T++ P P+ PA P P
Sbjct: 425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 483
Query: 232 LLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDF 291
AP+ T E P + K P EP TP E
Sbjct: 484 --------------APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP-APTTPKETAPTTP 528
Query: 292 EKQPHSPRERLDP----PPAP 308
+K + E+L P PAP
Sbjct: 529 KKLTPTTPEKLAPTTPEKPAP 549
Score = 39.3 bits (90), Expect = 0.008
Identities = 51/251 (20%), Positives = 83/251 (33%), Gaps = 27/251 (10%)
Query: 54 EPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAP 113
EPTP + A P K+ P P EP P P P +P P
Sbjct: 562 EPTPTTPEEPAPTTP---KAAAPNTPKEPAPTTPKEPA--PTTPKEPAPTTPKETAPTTP 616
Query: 114 QAFL-------AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVA--APESAAAAP 164
+ A +P + +P + + + + T + A P+ A
Sbjct: 617 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT 676
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
+ P+P P T+ T A + ++ P+ AP P+ +TS P P+ A
Sbjct: 677 PKEPAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKGPTSTTSDKPAPTTPKETAP 735
Query: 225 RRPGAPRLLSRTRQRELGGSAAP------SVAFSGDVTLSLERGP------ASAKPPPQV 272
P P + + P S + ++ + P SA+P P+
Sbjct: 736 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKA 795
Query: 273 LTAEPREDATP 283
L P+E P
Sbjct: 796 LENSPKEPGVP 806
Score = 32.7 bits (73), Expect = 0.71
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 180 TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQR 239
T P+ R ++ +A P+ P AP + TS P PR + PR ++ T
Sbjct: 911 TAKPKDRATNSKATTPKPQKPTK--APKKPTSTKKPKTMPRVRKPKTTPTPRKMTST-MP 967
Query: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPR-EDATPGEGRLPDFEKQPH 296
EL ++ + A T + P +++ P+ EDA EG P +PH
Sbjct: 968 ELNPTSRIAEAMLQTTT------RPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPH 1019
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 50.1 bits (118), Expect = 4e-06
Identities = 45/205 (21%), Positives = 69/205 (33%), Gaps = 8/205 (3%)
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P +P P + PA +P + T P T+ P+ A
Sbjct: 301 PALTTPKEPTP-TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT 359
Query: 165 GRSPSPADPGSTS-SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPA 223
+ P+P P + + T+ P + P+ AP P P+ +T + P P+ P
Sbjct: 360 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 419
Query: 224 SRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
P P ++ AP+ T E P + K P T EP TP
Sbjct: 420 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP-SPTTP 478
Query: 284 GEGRLPDFEKQPHSPRERLDPPPAP 308
E + P + +E PAP
Sbjct: 479 KEPAPTTTKSAPTTTKE-----PAP 498
Score = 44.7 bits (104), Expect = 2e-04
Identities = 59/262 (22%), Positives = 85/262 (32%), Gaps = 48/262 (18%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P ++ A P + + P P EP P P P +P
Sbjct: 516 TKEPAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPA--PTTTKKPAPTTPKEPAPT 570
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P+ A +P + +P T+ E T P + PE A P+P
Sbjct: 571 TPKE-TAPTTPKKLTP----TTPEKLAPTTPE-------KPAPTTPEELAPTTPEEPTPT 618
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-----PAPRFPASRR 226
P + T P+ AAP+ P P+ +T + P PAP P
Sbjct: 619 TPEEPAPTT--------------PKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 664
Query: 227 PGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEG 286
P P+ + T +E + A E P + K P +P G
Sbjct: 665 PTTPKGTAPTTLKEPAPTTPKKPA-------PKELAPTTTKEPTSTTCDKPAPTTPKGTA 717
Query: 287 RLPDFEKQPHSPRERLDPPPAP 308
E P +P+E PAP
Sbjct: 718 PTTPKEPAPTTPKE-----PAP 734
Score = 42.0 bits (97), Expect = 0.001
Identities = 61/261 (23%), Positives = 80/261 (30%), Gaps = 39/261 (14%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P + A P K P P EP T P P +P
Sbjct: 376 TKEPAPTTTKSA----PTTPKEPAPTTPKKPAPTTPKEPAP-------TTPKEPTPTTPK 424
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P + PA +P +A K T P+ A + PSP
Sbjct: 425 EPAP--TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSPT 476
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPR 231
P + T + A +AP P PS +T++ P P+ PA P P
Sbjct: 477 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 535
Query: 232 LLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDF 291
AP+ T E P + K P EP TP E
Sbjct: 536 --------------APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP-APTTPKETAPTTP 580
Query: 292 EKQPHSPRERLDP----PPAP 308
+K + E+L P PAP
Sbjct: 581 KKLTPTTPEKLAPTTPEKPAP 601
Score = 39.3 bits (90), Expect = 0.008
Identities = 51/251 (20%), Positives = 83/251 (33%), Gaps = 27/251 (10%)
Query: 54 EPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAP 113
EPTP + A P K+ P P EP P P P +P P
Sbjct: 614 EPTPTTPEEPAPTTP---KAAAPNTPKEPAPTTPKEPA--PTTPKEPAPTTPKETAPTTP 668
Query: 114 QAFL-------AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVA--APESAAAAP 164
+ A +P + +P + + + + T + A P+ A
Sbjct: 669 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT 728
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
+ P+P P T+ T A + ++ P+ AP P+ +TS P P+ A
Sbjct: 729 PKEPAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKGPTSTTSDKPAPTTPKETAP 787
Query: 225 RRPGAPRLLSRTRQRELGGSAAP------SVAFSGDVTLSLERGP------ASAKPPPQV 272
P P + + P S + ++ + P SA+P P+
Sbjct: 788 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKA 847
Query: 273 LTAEPREDATP 283
L P+E P
Sbjct: 848 LENSPKEPGVP 858
Score = 32.7 bits (73), Expect = 0.71
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 180 TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQR 239
T P+ R ++ +A P+ P AP + TS P PR + PR ++ T
Sbjct: 963 TAKPKDRATNSKATTPKPQKPTK--APKKPTSTKKPKTMPRVRKPKTTPTPRKMTST-MP 1019
Query: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPR-EDATPGEGRLPDFEKQPH 296
EL ++ + A T + P +++ P+ EDA EG P +PH
Sbjct: 1020 ELNPTSRIAEAMLQTTT------RPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPH 1071
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 50.1 bits (118), Expect = 4e-06
Identities = 45/205 (21%), Positives = 69/205 (33%), Gaps = 8/205 (3%)
Query: 105 PGRISPPAPQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
P +P P + PA +P + T P T+ P+ A
Sbjct: 342 PALTTPKEPTP-TTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTT 400
Query: 165 GRSPSPADPGSTS-SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPA 223
+ P+P P + + T+ P + P+ AP P P+ +T + P P+ P
Sbjct: 401 TKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 460
Query: 224 SRRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATP 283
P P ++ AP+ T E P + K P T EP TP
Sbjct: 461 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP-SPTTP 519
Query: 284 GEGRLPDFEKQPHSPRERLDPPPAP 308
E + P + +E PAP
Sbjct: 520 KEPAPTTTKSAPTTTKE-----PAP 539
Score = 44.7 bits (104), Expect = 2e-04
Identities = 59/262 (22%), Positives = 85/262 (32%), Gaps = 48/262 (18%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P ++ A P + + P P EP P P P +P
Sbjct: 557 TKEPAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPA--PTTTKKPAPTTPKEPAPT 611
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P+ A +P + +P T+ E T P + PE A P+P
Sbjct: 612 TPKE-TAPTTPKKLTP----TTPEKLAPTTPE-------KPAPTTPEELAPTTPEEPTPT 659
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPP-----PAPRFPASRR 226
P + T P+ AAP+ P P+ +T + P PAP P
Sbjct: 660 TPEEPAPTT--------------PKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETA 705
Query: 227 PGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEG 286
P P+ + T +E + A E P + K P +P G
Sbjct: 706 PTTPKGTAPTTLKEPAPTTPKKPA-------PKELAPTTTKEPTSTTCDKPAPTTPKGTA 758
Query: 287 RLPDFEKQPHSPRERLDPPPAP 308
E P +P+E PAP
Sbjct: 759 PTTPKEPAPTTPKE-----PAP 775
Score = 42.0 bits (97), Expect = 0.001
Identities = 61/261 (23%), Positives = 80/261 (30%), Gaps = 39/261 (14%)
Query: 52 TLEPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPP 111
T EP P + A P K P P EP T P P +P
Sbjct: 417 TKEPAPTTTKSA----PTTPKEPAPTTPKKPAPTTPKEPAP-------TTPKEPTPTTPK 465
Query: 112 APQAFLAQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPA 171
P + PA +P +A K T P+ A + PSP
Sbjct: 466 EPAP--TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSPT 517
Query: 172 DPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPR 231
P + T + A +AP P PS +T++ P P+ PA P P
Sbjct: 518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 576
Query: 232 LLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPDF 291
AP+ T E P + K P EP TP E
Sbjct: 577 --------------APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP-APTTPKETAPTTP 621
Query: 292 EKQPHSPRERLDP----PPAP 308
+K + E+L P PAP
Sbjct: 622 KKLTPTTPEKLAPTTPEKPAP 642
Score = 39.3 bits (90), Expect = 0.008
Identities = 51/251 (20%), Positives = 83/251 (33%), Gaps = 27/251 (10%)
Query: 54 EPTPLLRRKAAQLQPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTPPFAPGRISPPAP 113
EPTP + A P K+ P P EP P P P +P P
Sbjct: 655 EPTPTTPEEPAPTTP---KAAAPNTPKEPAPTTPKEPA--PTTPKEPAPTTPKETAPTTP 709
Query: 114 QAFL-------AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVA--APESAAAAP 164
+ A +P + +P + + + + T + A P+ A
Sbjct: 710 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT 769
Query: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
+ P+P P T+ T A + ++ P+ AP P+ +TS P P+ A
Sbjct: 770 PKEPAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKGPTSTTSDKPAPTTPKETAP 828
Query: 225 RRPGAPRLLSRTRQRELGGSAAP------SVAFSGDVTLSLERGP------ASAKPPPQV 272
P P + + P S + ++ + P SA+P P+
Sbjct: 829 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKA 888
Query: 273 LTAEPREDATP 283
L P+E P
Sbjct: 889 LENSPKEPGVP 899
Score = 32.7 bits (73), Expect = 0.71
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 180 TRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQR 239
T P+ R ++ +A P+ P AP + TS P PR + PR ++ T
Sbjct: 1004 TAKPKDRATNSKATTPKPQKPTK--APKKPTSTKKPKTMPRVRKPKTTPTPRKMTST-MP 1060
Query: 240 ELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPR-EDATPGEGRLPDFEKQPH 296
EL ++ + A T + P +++ P+ EDA EG P +PH
Sbjct: 1061 ELNPTSRIAEAMLQTTT------RPNQTPNSKLVEVNPKSEDAGGAEGETPHMLLRPH 1112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,505,374
Number of Sequences: 37866
Number of extensions: 1534392
Number of successful extensions: 17756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 1849
Number of HSP's that attempted gapping in prelim test: 11569
Number of HSP's gapped (non-prelim): 6036
length of query: 459
length of database: 18,247,518
effective HSP length: 106
effective length of query: 353
effective length of database: 14,233,722
effective search space: 5024503866
effective search space used: 5024503866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.