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Search of human proteins with 239755939
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755939 PREDICTED: hypothetical protein [Homo sapiens]
(313 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755939 PREDICTED: hypothetical protein [Homo sapiens] 662 0.0
gi|239750466 PREDICTED: hypothetical protein [Homo sapiens] 539 e-153
gi|239744760 PREDICTED: hypothetical protein XP_002343262 [Homo ... 536 e-153
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 35 0.11
gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo sap... 34 0.15
gi|13124773 brain protein 16 [Homo sapiens] 34 0.15
gi|46447823 nuclear factor of activated T-cells, cytoplasmic, ca... 34 0.19
gi|169169054 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|169168706 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|169169649 PREDICTED: hypothetical protein [Homo sapiens] 33 0.25
gi|149363685 hypothetical protein LOC23379 [Homo sapiens] 33 0.43
gi|239755398 PREDICTED: hypothetical protein [Homo sapiens] 33 0.43
gi|197333868 T-box 2 [Homo sapiens] 32 0.56
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 32 0.56
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 32 0.56
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 32 0.56
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 32 0.56
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 32 0.95
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 32 0.95
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 32 0.95
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 32 0.95
gi|239756916 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|239756849 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo ... 31 1.2
gi|239747516 PREDICTED: hypothetical protein [Homo sapiens] 31 1.2
gi|239745917 PREDICTED: hypothetical protein XP_002343616 [Homo ... 31 1.2
gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo ... 31 1.2
gi|239741394 PREDICTED: hypothetical protein XP_002342192 [Homo ... 31 1.2
gi|148612825 Rap GTPase interactor [Homo sapiens] 31 1.2
gi|28557723 hypothetical protein LOC283416 [Homo sapiens] 31 1.2
>gi|239755939 PREDICTED: hypothetical protein [Homo sapiens]
Length = 313
Score = 662 bits (1709), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE
Sbjct: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
Query: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG
Sbjct: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
Query: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL
Sbjct: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
Query: 181 SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE
Sbjct: 181 SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
Query: 241 PARDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSLTHLKDLLLDERR 300
PARDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSLTHLKDLLLDERR
Sbjct: 241 PARDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSLTHLKDLLLDERR 300
Query: 301 HHHDHDSAQHSAQ 313
HHHDHDSAQHSAQ
Sbjct: 301 HHHDHDSAQHSAQ 313
>gi|239750466 PREDICTED: hypothetical protein [Homo sapiens]
Length = 351
Score = 539 bits (1388), Expect = e-153
Identities = 256/270 (94%), Positives = 257/270 (95%)
Query: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE
Sbjct: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
Query: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG
Sbjct: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
Query: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL
Sbjct: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
Query: 181 SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE
Sbjct: 181 SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
Query: 241 PARDLLPPGHKARAPIPLRSPTHRNARVLP 270
PARDLLPPGHK P P R R+ P
Sbjct: 241 PARDLLPPGHKPWPGPPSPLPGDRGPRLSP 270
>gi|239744760 PREDICTED: hypothetical protein XP_002343262 [Homo
sapiens]
Length = 351
Score = 536 bits (1382), Expect = e-153
Identities = 255/270 (94%), Positives = 256/270 (94%)
Query: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE
Sbjct: 1 MGSHHTGTAVFHLGGEEAWAQRLNGTGQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDE 60
Query: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG
Sbjct: 61 PLPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVREKRG 120
Query: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL
Sbjct: 121 VGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQL 180
Query: 181 SVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
SVECVKSLPLHGPALRRQNDKHMSWGR LRATAQMPPNTFLCARLSFSPPQASRLKHVLE
Sbjct: 181 SVECVKSLPLHGPALRRQNDKHMSWGRRLRATAQMPPNTFLCARLSFSPPQASRLKHVLE 240
Query: 241 PARDLLPPGHKARAPIPLRSPTHRNARVLP 270
PARDLLPPGHK P P R R+ P
Sbjct: 241 PARDLLPPGHKPWPGPPSPLPGDRGPRLSP 270
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Query: 68 SSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAG 113
SS +P C KP MC CVP C C++ G GCG+ G S G
Sbjct: 128 SSCCVPVCCCKP--MCCCVPA--CSCSS----CGKGGCGSCGCSKG 165
>gi|113420249 PREDICTED: hypothetical protein LOC728071 [Homo
sapiens]
Length = 390
Score = 34.3 bits (77), Expect = 0.15
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 110 LSAGRVREKRGVGAGGPVRP--SGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDV 167
L A VR + GP R +GQA L L+ L LAP A RD + D
Sbjct: 37 LQAAAVRHVLALTGCGPGRALLAGQAAL----LQALMELAPASAPARDAARALVNLAADP 92
Query: 168 LGIVHHLGHQHQLSVECVKSLPLHGPALRRQNDKHMSWGRTLRA-----TAQMPPNTFLC 222
G+ H+ L+ + L G AL D W A + + P L
Sbjct: 93 -GL-----HETLLAADPGLPARLMGRAL----DPQWPWAEEAAAALANLSREPAPCAALM 142
Query: 223 ARLSFSPPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLPAPSA 274
A L+ + P S L+ ++ R L PG+ ARAP+ +P N PA A
Sbjct: 143 AALAAAEPADSGLERLV---RALCTPGYNARAPLHYLAPLLSNLSQRPAARA 191
>gi|13124773 brain protein 16 [Homo sapiens]
Length = 390
Score = 34.3 bits (77), Expect = 0.15
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 110 LSAGRVREKRGVGAGGPVRP--SGQAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDV 167
L A VR + GP R +GQA L L+ L LAP A RD + D
Sbjct: 37 LQAAAVRHVLALTGCGPGRALLAGQAAL----LQALMELAPASAPARDAARALVNLAADP 92
Query: 168 LGIVHHLGHQHQLSVECVKSLPLHGPALRRQNDKHMSWGRTLRA-----TAQMPPNTFLC 222
G+ H+ L+ + L G AL D W A + + P L
Sbjct: 93 -GL-----HETLLAADPGLPARLMGRAL----DPQWPWAEEAAAALANLSREPAPCAALM 142
Query: 223 ARLSFSPPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLPAPSA 274
A L+ + P S L+ ++ R L PG+ ARAP+ +P N PA A
Sbjct: 143 AALAAAEPADSGLERLV---RALCTPGYNARAPLHYLAPLLSNLSQRPAARA 191
>gi|46447823 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 interacting protein [Homo
sapiens]
Length = 419
Score = 33.9 bits (76), Expect = 0.19
Identities = 45/164 (27%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 96 GTWQLGGSGCGAGGLSAGRVREKRGVGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDRD 155
G W GGSG G GG RG G RP Q + G TL ++ DL D D
Sbjct: 9 GRWS-GGSGAGRGG---------RGGWGGRGRRPRAQRSPSRG---TLDVVSVDLVTDSD 55
Query: 156 QQQDAAQRQEDVLGIVHHLGHQHQLSVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQM 215
E++L + G ++ VE + GP R N S G R
Sbjct: 56 ---------EEILEVATARGAADEVEVEPPEP---PGPVASRDNSNSDSEGEDRRPAG-- 101
Query: 216 PPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHKARAPIPLR 259
PP P R + VL+P L P + + LR
Sbjct: 102 PPR----------EPVRRRRRLVLDPGEAPLVPVYSGKVKSSLR 135
>gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]
Length = 399
Score = 33.5 bits (75), Expect = 0.25
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 111 SAGRVREKRGVGAGGPVRPSGQAWLAHGVLR-TLTYLAPDLADDRDQQQDAAQRQEDVLG 169
+ G R R + A P+ P G + R T YL L + D +DAA+ + +G
Sbjct: 25 ATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVYLGHALGEAVDLLRDAAELAVNAVG 84
Query: 170 IVHHLGHQH-------QLSVECVKSLPLHGPALRRQN---DKHMSWGRTLRATAQMPPNT 219
+ HLG+ H QL +E +++ L R+N H S GR A Q
Sbjct: 85 MA-HLGYDHGLRHAQLQLGIEVIQTRLLLLERDSRENRDPGAHASSGRCEIALQQRTEEA 143
Query: 220 FLCARLSFSPPQASRLKHVLEPARDL-----LPPGHKARAPIPL 258
PP ++L H+LE R L + H AP+ L
Sbjct: 144 V------GHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVHL 181
>gi|169168706 PREDICTED: hypothetical protein [Homo sapiens]
Length = 399
Score = 33.5 bits (75), Expect = 0.25
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 111 SAGRVREKRGVGAGGPVRPSGQAWLAHGVLR-TLTYLAPDLADDRDQQQDAAQRQEDVLG 169
+ G R R + A P+ P G + R T YL L + D +DAA+ + +G
Sbjct: 25 ATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVYLGHALGEAVDLLRDAAELAVNAVG 84
Query: 170 IVHHLGHQH-------QLSVECVKSLPLHGPALRRQN---DKHMSWGRTLRATAQMPPNT 219
+ HLG+ H QL +E +++ L R+N H S GR A Q
Sbjct: 85 MA-HLGYDHGLRHAQLQLGIEVIQTRLLLLERDSRENRDPGAHASSGRCEIALQQRTEEA 143
Query: 220 FLCARLSFSPPQASRLKHVLEPARDL-----LPPGHKARAPIPL 258
PP ++L H+LE R L + H AP+ L
Sbjct: 144 V------GHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVHL 181
>gi|169169649 PREDICTED: hypothetical protein [Homo sapiens]
Length = 399
Score = 33.5 bits (75), Expect = 0.25
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 111 SAGRVREKRGVGAGGPVRPSGQAWLAHGVLR-TLTYLAPDLADDRDQQQDAAQRQEDVLG 169
+ G R R + A P+ P G + R T YL L + D +DAA+ + +G
Sbjct: 25 ATGCTRRARLIWALLPLLPGGTGRVLIPCPRGTPVYLGHALGEAVDLLRDAAELAVNAVG 84
Query: 170 IVHHLGHQH-------QLSVECVKSLPLHGPALRRQN---DKHMSWGRTLRATAQMPPNT 219
+ HLG+ H QL +E +++ L R+N H S GR A Q
Sbjct: 85 MA-HLGYDHGLRHAQLQLGIEVIQTRLLLLERDSRENRDPGAHASSGRCEIALQQRTEEA 143
Query: 220 FLCARLSFSPPQASRLKHVLEPARDL-----LPPGHKARAPIPL 258
PP ++L H+LE R L + H AP+ L
Sbjct: 144 V------GHPPSQAQLPHLLEHIRHLQEDQAMEQQHVQDAPVHL 181
>gi|149363685 hypothetical protein LOC23379 [Homo sapiens]
Length = 2266
Score = 32.7 bits (73), Expect = 0.43
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 27 GQAHPRKGTQDPQPLWSGLWATWREGSRTVLVDEPLPTSPFSSSSIPECLHKPARMCVC- 85
GQ P + T P + + W E R +P P SP ++S+ + P + C
Sbjct: 1667 GQVSPFRETPVPPAM-----SPWPEDPRRASPPDPSP-SPSAASASERVVPSPLQFCAAT 1720
Query: 86 ------VPGRVCRCATGTWQLGG 102
VPGR+ CA+G +GG
Sbjct: 1721 PKHALPVPGRLPPCASGHAAVGG 1743
>gi|239755398 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 32.7 bits (73), Expect = 0.43
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 225 LSFSPPQASRLKHVLEPARDLLPPGHKARAPIPL-RSPTHRNARVLPAPSAQQPGSVRGP 283
+S S P S K+ A PPG + + PL R+P H ++ PS + G G
Sbjct: 3 ISASSPNRSARKYSTRSAAFQKPPGRRPMSSRPLSRTPPHGGGEMVRRPSGARGGGDPGR 62
Query: 284 PG 285
PG
Sbjct: 63 PG 64
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 32.3 bits (72), Expect = 0.56
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 62 LPTSPFSSSSIPECLHKPARMCVCVPGRVCRCATGTWQLGGSGCGAGGLSAGRVRE---- 117
L SPF S+ P P ++ V +P TG G G + E
Sbjct: 606 LSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLASEGSKAAGGNSREPSPLPELALR 665
Query: 118 KRGVGAGGPVRPSGQAWLAHGVLRTLTYLAPDLADDR 154
K G + G + PSG A A L+++ L L R
Sbjct: 666 KVGAPSRGALSPSGSAKEAANELQSIQRLVSGLESQR 702
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 32.3 bits (72), Expect = 0.56
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 16/163 (9%)
Query: 132 QAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQLSVECVKSLPLH 191
+A++ H +L L Y + D + ++ D AQR++D+L + H L + + + + +
Sbjct: 684 KAFIHHELLAYL-YSSADQSSLMEESADQAQRRDDMLRMYHALKEALNI-IGDISTSTVS 741
Query: 192 GPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHK 251
P +D + + T Q P + S PP P L+P
Sbjct: 742 TPVPPPVDDTWLQSASSHSPTPQRRPVS------SIHPPGRPPAVRGPTPGPPLIPVPVG 795
Query: 252 ARA-----PIPLR---SPTHRNARVLPAPSAQQPGSVRGPPGV 286
A A PIP R N+ + PAP VR PPG+
Sbjct: 796 AAASFSAPPIPSRPGPQSVFANSDLFPAPPQIPSRPVRIPPGI 838
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 32.3 bits (72), Expect = 0.56
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 16/163 (9%)
Query: 132 QAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQLSVECVKSLPLH 191
+A++ H +L L Y + D + ++ D AQR++D+L + H L + + + + +
Sbjct: 688 KAFIHHELLAYL-YSSADQSSLMEESADQAQRRDDMLRMYHALKEALNI-IGDISTSTVS 745
Query: 192 GPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHK 251
P +D + + T Q P + S PP P L+P
Sbjct: 746 TPVPPPVDDTWLQSASSHSPTPQRRPVS------SIHPPGRPPAVRGPTPGPPLIPVPVG 799
Query: 252 ARA-----PIPLR---SPTHRNARVLPAPSAQQPGSVRGPPGV 286
A A PIP R N+ + PAP VR PPG+
Sbjct: 800 AAASFSAPPIPSRPGPQSVFANSDLFPAPPQIPSRPVRIPPGI 842
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 32.3 bits (72), Expect = 0.56
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 16/163 (9%)
Query: 132 QAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQLSVECVKSLPLH 191
+A++ H +L L Y + D + ++ D AQR++D+L + H L + + + + +
Sbjct: 688 KAFIHHELLAYL-YSSADQSSLMEESADQAQRRDDMLRMYHALKEALNI-IGDISTSTVS 745
Query: 192 GPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHK 251
P +D + + T Q P + S PP P L+P
Sbjct: 746 TPVPPPVDDTWLQSASSHSPTPQRRPVS------SIHPPGRPPAVRGPTPGPPLIPVPVG 799
Query: 252 ARA-----PIPLR---SPTHRNARVLPAPSAQQPGSVRGPPGV 286
A A PIP R N+ + PAP VR PPG+
Sbjct: 800 AAASFSAPPIPSRPGPQSVFANSDLFPAPPQIPSRPVRIPPGI 842
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 32.3 bits (72), Expect = 0.56
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 16/163 (9%)
Query: 132 QAWLAHGVLRTLTYLAPDLADDRDQQQDAAQRQEDVLGIVHHLGHQHQLSVECVKSLPLH 191
+A++ H +L L Y + D + ++ D AQR++D+L + H L + + + + +
Sbjct: 684 KAFIHHELLAYL-YSSADQSSLMEESADQAQRRDDMLRMYHALKEALNI-IGDISTSTVS 741
Query: 192 GPALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHK 251
P +D + + T Q P + S PP P L+P
Sbjct: 742 TPVPPPVDDTWLQSASSHSPTPQRRPVS------SIHPPGRPPAVRGPTPGPPLIPVPVG 795
Query: 252 ARA-----PIPLR---SPTHRNARVLPAPSAQQPGSVRGPPGV 286
A A PIP R N+ + PAP VR PPG+
Sbjct: 796 AAASFSAPPIPSRPGPQSVFANSDLFPAPPQIPSRPVRIPPGI 838
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%)
Query: 193 PALRRQNDKHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHKA 252
PA QN + + +T +T + + L K + +P LL P K
Sbjct: 443 PASNNQNARMLEGRQTPASTLEQDATDYRLRSLR---------KLLAQPREGLLAPFSKR 493
Query: 253 RAP---------IPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSLTHLKDL 294
+ IP++ P R + P PS P S + PPG + +L +
Sbjct: 494 NSTASFPGRTSHIPVQQPEKRKQKPSPEPSQDSPHSDKWPPGHPVKNLPQM 544
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
[Homo sapiens]
Length = 1524
Score = 31.6 bits (70), Expect = 0.95
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 206 GRTLRATAQMPPNTFLCARL-------SFSPPQASRLKHVLEPARDLLPPGHKARAPIPL 258
GR+LR PP R+ S P QA +L P R G K+ P
Sbjct: 1280 GRSLRKINSAPPTETKSLRIASRSTRHSHGPLQADVFVELLSPRRKRR--GRKSANNTPE 1337
Query: 259 RSPTHRNARVLPAPSAQQPGSVRGPPGVSL 288
SP N RV+ S++Q SV +SL
Sbjct: 1338 NSPNFPNFRVIATKSSEQSRSVNIASKLSL 1367
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
[Homo sapiens]
Length = 1556
Score = 31.6 bits (70), Expect = 0.95
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 206 GRTLRATAQMPPNTFLCARL-------SFSPPQASRLKHVLEPARDLLPPGHKARAPIPL 258
GR+LR PP R+ S P QA +L P R G K+ P
Sbjct: 1312 GRSLRKINSAPPTETKSLRIASRSTRHSHGPLQADVFVELLSPRRKRR--GRKSANNTPE 1369
Query: 259 RSPTHRNARVLPAPSAQQPGSVRGPPGVSL 288
SP N RV+ S++Q SV +SL
Sbjct: 1370 NSPNFPNFRVIATKSSEQSRSVNIASKLSL 1399
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 31.6 bits (70), Expect = 0.95
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 211 ATAQMPPNTFLCARLSFSPPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLP 270
A A++P +R P + S L + +P R PP A+ P S T ++ LP
Sbjct: 1828 APAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLP 1887
Query: 271 ---APSAQQPGSVRGP 283
P Q G++ GP
Sbjct: 1888 RKRPPVTQAAGALPGP 1903
>gi|239756916 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 229 PPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSL 288
PP+ HV A +LLP GH+ R+P +SP A + P P A +R G
Sbjct: 83 PPRFLTWVHV---ALNLLPRGHEERSPWEAKSPRGPYAALRPQPCASPLSQLRYLRGELS 139
Query: 289 THLKDLLLDE 298
H + L+ +
Sbjct: 140 DHCQPPLVSK 149
>gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 102 GSGCGAG-GLSAGRVREKRGVGAGGPVRPSGQAWLAH 137
G+G GAG G AGR ++ AGGP R G +WL H
Sbjct: 285 GAGAGAGVGTRAGRQGDRAPGEAGGP-RGIGNSWLPH 320
>gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo
sapiens]
Length = 329
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 102 GSGCGAG-GLSAGRVREKRGVGAGGPVRPSGQAWLAH 137
G+G GAG G AGR ++ AGGP R G +WL H
Sbjct: 285 GAGAGAGVGTRAGRQGDRAPGEAGGP-RGIGNSWLPH 320
>gi|239747516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 209
Score = 31.2 bits (69), Expect = 1.2
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 88 GRVCRCATGT--WQLGGSGCGAGGLSAG-----RVREKRGVGAGGPVRPSG 131
G CR + + W+ GG G G GG S G R+R G+G GG R G
Sbjct: 136 GPCCRSSLSSSRWEAGG-GAGGGGGSRGPAAWDRIRVNGGLGGGGGCRGGG 185
>gi|239745917 PREDICTED: hypothetical protein XP_002343616 [Homo
sapiens]
Length = 522
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 229 PPQASRLKHVLEPARDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQPGSVRGPPGVSL 288
PP+ HV A +LLP GH+ R+P +SP A + P P A +R G
Sbjct: 83 PPRFLTWVHV---ALNLLPRGHEERSPWEAKSPRGPYAALRPQPCASPLSQLRYLRGELS 139
Query: 289 THLKDLLLDE 298
H + L+ +
Sbjct: 140 DHCQPPLVSK 149
>gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo
sapiens]
Length = 329
Score = 31.2 bits (69), Expect = 1.2
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 102 GSGCGAG-GLSAGRVREKRGVGAGGPVRPSGQAWLAH 137
G+G GAG G AGR ++ AGGP R G +WL H
Sbjct: 285 GAGAGAGVGTRAGRQGDRAPGEAGGP-RGIGNSWLPH 320
>gi|239741394 PREDICTED: hypothetical protein XP_002342192 [Homo
sapiens]
Length = 209
Score = 31.2 bits (69), Expect = 1.2
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 88 GRVCRCATGT--WQLGGSGCGAGGLSAG-----RVREKRGVGAGGPVRPSG 131
G CR + + W+ GG G G GG S G R+R G+G GG R G
Sbjct: 136 GPCCRSSLSSSRWEAGG-GAGGGGGSRGPAAWDRIRVNGGLGGGGGCRGGG 185
>gi|148612825 Rap GTPase interactor [Homo sapiens]
Length = 1075
Score = 31.2 bits (69), Expect = 1.2
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 201 KHMSWGRTLRATAQMPPNTFLCARLSFSPPQASRLK---HVLEPARDLLP--PGHKARAP 255
+H WG RA+ P A P + H+ P+ L P PG AR
Sbjct: 804 RHFLWGLRSRASPGSPGRPGSGASQPVCPEGMHHVVLDGHLEAPSCPLAPRDPGPAAREV 863
Query: 256 IPLRSPTHRNARVLPAPSAQQP---GSVRGPP 284
P R+ R A AP +QP GS GPP
Sbjct: 864 APERTLPLRGAPWAQAPPGRQPSRGGSQAGPP 895
>gi|28557723 hypothetical protein LOC283416 [Homo sapiens]
Length = 131
Score = 31.2 bits (69), Expect = 1.2
Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 177 QHQLSVECVKSLPLHGPALRRQNDKHMSWGRTLRATAQMPPNTFL-CARLSFSPPQASRL 235
+HQL ++C + PALR S L P L C R+ + P R
Sbjct: 8 RHQLVLDCPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRR- 66
Query: 236 KHVLEPA-----RDLLPPGHKARAPIPLRSPTHRNARVLPAPSAQQ 276
+EPA ++ GH A A R++R +P P Q
Sbjct: 67 --AVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQ 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,330,617
Number of Sequences: 37866
Number of extensions: 955491
Number of successful extensions: 3981
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 3895
Number of HSP's gapped (non-prelim): 199
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.