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Search of human proteins with 239755710
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
(402 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 823 0.0
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 507 e-144
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 487 e-138
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 397 e-111
gi|110832843 TBP-associated factor 4 [Homo sapiens] 63 5e-10
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 61 2e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 60 5e-09
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 60 5e-09
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 60 5e-09
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 58 1e-08
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 58 2e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 4e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 56 5e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 56 5e-08
gi|118402590 myosin XV [Homo sapiens] 56 7e-08
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 56 7e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 1e-07
gi|148762978 similar to CG15216-PA [Homo sapiens] 55 1e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 54 2e-07
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 54 2e-07
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 54 2e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens] 54 2e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 53 4e-07
gi|60460889 Myb protein P42POP [Homo sapiens] 53 6e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 53 6e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 53 6e-07
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 52 7e-07
gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens] 52 7e-07
gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens] 52 7e-07
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 52 9e-07
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 823 bits (2126), Expect = 0.0
Identities = 402/402 (100%), Positives = 402/402 (100%)
Query: 1 MEEFREGATFLTPYKVLATCQAPFPYLVSVQLPTLDKQETLVAEEKRGWKQRGRNGAPGT 60
MEEFREGATFLTPYKVLATCQAPFPYLVSVQLPTLDKQETLVAEEKRGWKQRGRNGAPGT
Sbjct: 1 MEEFREGATFLTPYKVLATCQAPFPYLVSVQLPTLDKQETLVAEEKRGWKQRGRNGAPGT 60
Query: 61 QRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALA 120
QRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALA
Sbjct: 61 QRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALA 120
Query: 121 SLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV 180
SLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV
Sbjct: 121 SLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV 180
Query: 181 PGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPT 240
PGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPT
Sbjct: 181 PGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPT 240
Query: 241 VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLS 300
VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLS
Sbjct: 241 VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLS 300
Query: 301 SERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG 360
SERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG
Sbjct: 301 SERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG 360
Query: 361 PGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
PGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 361 PGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 507 bits (1306), Expect = e-144
Identities = 285/452 (63%), Positives = 301/452 (66%), Gaps = 57/452 (12%)
Query: 1 MEEFREGATFLTPYKVLATCQAPFPYLVSVQLPTLDKQETLVAEEKRGWKQRGRNG---- 56
MEEF EGATFLTPYKVLATCQAPFPY+VS QLPTLDKQETLVAEEKRGWKQRGRNG
Sbjct: 1 MEEFTEGATFLTPYKVLATCQAPFPYIVSAQLPTLDKQETLVAEEKRGWKQRGRNGENAD 60
Query: 57 ---------------------------------------APGTQRGVREVGSPTRDQELR 77
PG + + G P
Sbjct: 61 TARLFGTTVYTFEVLGALPPDRSPTPRSRVSPGVTGLAVGPGNPKRCQRSGVPYEGPGAP 120
Query: 78 AGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGG 137
G ++ P G + G P PG P +L P +AG + ++QG
Sbjct: 121 GGQQLRKSRARLPRTRPGREDAAVRGRNRDPAEPGSLRPTSLGF---PARAG-QGQVQGA 176
Query: 138 SSG----ASPRRLPGGRGPAAAFAVEPGTGQRPRNT--SLAQASRSGTVPGLPPASLQPL 191
+ G P+ PG GP+ V G G R L PG PPA L P
Sbjct: 177 APGRRLRGEPKTPPGRSGPSG--GVRSGAGHRAATAEHQLGAGFSVRNGPG-PPARLPPA 233
Query: 192 RL-PYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTP 250
P L P PH+PTSRGPGRLLTCEPPSRKLPPPLP CRSRWVLAPPPTVRPRLRVLTP
Sbjct: 234 PPGPPLRPARPHNPTSRGPGRLLTCEPPSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLTP 293
Query: 251 PLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRA 310
P L ALPERGSRTPSTRSAVL RVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRA
Sbjct: 294 PFTLLCALPERGSRTPSTRSAVLVDRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRA 353
Query: 311 FCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPY 370
FCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPY
Sbjct: 354 FCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPY 413
Query: 371 TLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
+LTRFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 414 SLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 445
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 487 bits (1254), Expect = e-138
Identities = 231/243 (95%), Positives = 236/243 (97%)
Query: 1 MEEFREGATFLTPYKVLATCQAPFPYLVSVQLPTLDKQETLVAEEKRGWKQRGRNGAPGT 60
MEEFREGATFLTPYKVLATCQAPFPY+VSVQLPTLDKQETLVAEE+RGWKQRGRNGAPGT
Sbjct: 1 MEEFREGATFLTPYKVLATCQAPFPYIVSVQLPTLDKQETLVAEERRGWKQRGRNGAPGT 60
Query: 61 QRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALA 120
QRGVREVGSPTRDQE+RAGSSCGRAARGFPEPGRGGKTQ+WGGGTGTPQSPGPCAPQALA
Sbjct: 61 QRGVREVGSPTRDQEIRAGSSCGRAARGFPEPGRGGKTQEWGGGTGTPQSPGPCAPQALA 120
Query: 121 SLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV 180
SLLGPGKAGCR RLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV
Sbjct: 121 SLLGPGKAGCRARLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTV 180
Query: 181 PGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPT 240
PGLPPASLQPLR+PY APPGPHDPTSRGPGRLLT EPPSRKLPPPLP CRSRWVLAPPP
Sbjct: 181 PGLPPASLQPLRVPYFAPPGPHDPTSRGPGRLLTREPPSRKLPPPLPLCRSRWVLAPPPP 240
Query: 241 VRP 243
P
Sbjct: 241 PAP 243
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 397 bits (1021), Expect = e-111
Identities = 227/355 (63%), Positives = 242/355 (68%), Gaps = 20/355 (5%)
Query: 58 PGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQ 117
PG + G P G ++ P +G + G P PG P
Sbjct: 54 PGNPTRCQRSGVPYEGPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPT 113
Query: 118 ALASLLGPGKAGCRTRLQGGSSG----ASPRRLPGGRGPAAAFAVEPGTGQRP----RNT 169
+L P +AG + R+QG + G P+ PG GP+ V G G R
Sbjct: 114 SLGF---PARAG-QGRVQGAAPGRKLRGEPKTPPGRSGPSGG--VRSGAGHRAAAAEHQL 167
Query: 170 SLAQASRSGTVPG--LPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP 227
+ R+G P LPPA PL P PP P+ P R P TCEPPSRKLPPPLP
Sbjct: 168 GAGFSVRNGPGPPARLPPAPPGPLLRP-ARPPRPYFPRPRTPP---TCEPPSRKLPPPLP 223
Query: 228 PCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLT 287
CRSRWVLAPPP VRPRLRVLTPPLALR ALPERGSRTPSTRSAVLSGRVAGLGTELTLT
Sbjct: 224 LCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLT 283
Query: 288 PSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL 347
PSSRRAHGSH LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL
Sbjct: 284 PSSRRAHGSHALSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAAL 343
Query: 348 ALGAPRGRTPSPGPGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
A GAPRGRTPSP PGPAPALQPY LTRFPASLSLPDLVFTSVGSSLVICLVPTPL
Sbjct: 344 ARGAPRGRTPSPRPGPAPALQPYALTRFPASLSLPDLVFTSVGSSLVICLVPTPL 398
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 62.8 bits (151), Expect = 5e-10
Identities = 96/374 (25%), Positives = 118/374 (31%), Gaps = 70/374 (18%)
Query: 57 APGTQRGVREVGSPTRDQELRAGSSCGRAARG-----------FPEPGRGGKTQKWGGGT 105
AP T VR + + +GS G A G PEP G+ + GGG
Sbjct: 44 APRTPE-VRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGG- 101
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQR 165
PQ PGP +P+ GP + R S S +P AA P +
Sbjct: 102 --PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Query: 166 PRNTSLAQASRSGTVPGLPPASLQPLRLPYLAP-PGPHDPTSRG---------------- 208
P + A A+R+G PG P P PGP P G
Sbjct: 160 PAGPA-ALAARAGPGPGPGPGP---------GPGPGPGKPAGPGAAQTLNGSAALLNSHH 209
Query: 209 ---PGRLLTCEPPSRKLPPPLPPCRSRWVLAPP---PTVRPRLRVLTPPLALRRALPERG 262
P L P+ LP P P + PP P +PP A A P
Sbjct: 210 AAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAA 269
Query: 263 SRTPSTRSAVLS---GRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTR---AFCSADP 316
P A L+ G AG T P A + AP A S P
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Query: 317 LP-------------RPPSFVPSLPSPQAQGQAVRQPRLLRAALALG-APRGRTPSPGPG 362
P P V P AQ A P A++ +G +G PSP
Sbjct: 330 GPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAV 389
Query: 363 PAPALQPYTLTRFP 376
P PA P T T P
Sbjct: 390 PPPA--PGTPTGLP 401
Score = 55.5 bits (132), Expect = 9e-08
Identities = 71/259 (27%), Positives = 91/259 (35%), Gaps = 48/259 (18%)
Query: 134 LQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRL 193
+ G +GA+ G GPAA PG P A+ G PP+ +PL
Sbjct: 63 VSGSPAGAA------GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPL-- 114
Query: 194 PYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP---------PCRSRWVLAPPPTVRPR 244
P GP PP+ KL PP P + P P
Sbjct: 115 ---VPAGP--------------APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Query: 245 LRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQ 304
+ P RA P G P G+ AG G TL S+ L+S
Sbjct: 158 AKPAGPAALAARAGPGPGPG-PGPGPGPGPGKPAGPGAAQTLNGSAAL------LNSHHA 210
Query: 305 AAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGP- 363
AAP + + P P LP P A G ++ P + AA A AP +P P P
Sbjct: 211 AAPAVSLVNNGPAALLP-----LPKPAAPGTVIQTPPFVGAA-APPAPAAPSPPAAPAPA 264
Query: 364 APALQPYTLTRFPASLSLP 382
APA P PA+L+ P
Sbjct: 265 APAAAPPPPPPAPATLARP 283
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 61.2 bits (147), Expect = 2e-09
Identities = 84/338 (24%), Positives = 131/338 (38%), Gaps = 51/338 (15%)
Query: 50 KQRGRNGAPGTQRGVREVGSPTRDQELRAGSSC--GRAARGFPEPGRGGKTQKWGGGTGT 107
++R R+ +P + G +P R R+ + GR+ P G + G
Sbjct: 632 RRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR 691
Query: 108 PQSPGPCAPQALA-SLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRP 166
+S P ++ + SL+ G++ RT + G SG+S R R T QR
Sbjct: 692 SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSR-----------TSQR- 739
Query: 167 RNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPL 226
SRS + P + + + R L+ P + R L+ P K
Sbjct: 740 -------RSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQT 792
Query: 227 PPCRSRWVLAPPPTVRPRLRVLTPPLALRRAL---PERGSRTPSTRS--------AVLSG 275
PP RSR + +P+ + TPP R + P++ S+TPS +S V SG
Sbjct: 793 PPRRSR-----SGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSG 847
Query: 276 RVAGLGT-------ELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLP 328
G+ E ++TP R S P + P+R CS PR S P
Sbjct: 848 TPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQ 907
Query: 329 SPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPA 366
SP QP++ A+ +PR R+ S P+P+
Sbjct: 908 SPSRSSSP--QPKV----KAIISPRQRSHSGSSSPSPS 939
Score = 41.6 bits (96), Expect = 0.001
Identities = 85/341 (24%), Positives = 122/341 (35%), Gaps = 35/341 (10%)
Query: 51 QRGRNGAP-------GTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGG 103
+RGR+ +P R RE TR ++ R+GSS + R R T++ G
Sbjct: 1758 RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRD-RSGSSQSTSRRRQRSRSRSRVTRRRRG 1816
Query: 104 GTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTG 163
G+G S P ++ S + R+R S S R + P T
Sbjct: 1817 GSGY-HSRSPARQES--SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATH 1873
Query: 164 QRPRNTS---LAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSR 220
+R R+ + + SRS T P S + P SR R T R
Sbjct: 1874 RRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRR 1933
Query: 221 KLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGL 280
+ P R R PP R R R TPP+ RR+ R S RS + V
Sbjct: 1934 RSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRS-RSRTSPITRRRSRSRTSPVTRR 1992
Query: 281 GTELTLTPSSRRAHGSH--PLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVR 338
+ +P +RR S P++ R + T R S P LP +++ R
Sbjct: 1993 RSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRR----RSRSRTPLLPRKRSRS---R 2045
Query: 339 QPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPASL 379
P +R R RTP G +LTR P ++
Sbjct: 2046 SPLAIRR-----RSRSRTPRTARGKR------SLTRSPPAI 2075
Score = 39.7 bits (91), Expect = 0.005
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 30/230 (13%)
Query: 138 SSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLA 197
S P G + P+A A++P +R ++S + +S S + +S +
Sbjct: 2504 SDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSS---------S 2554
Query: 198 PPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRA 257
G S G + E +++P P P AP + +R PP
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTP--------AP----KEAVREGRPP---EPT 2599
Query: 258 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPL 317
+R R+ S+ S+ S + + + + SS + S SS ++P+ A L
Sbjct: 2600 PAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQAL 2659
Query: 318 PRPPSFVPSLPSP-QAQGQAVRQP-RLLR--AALALGAPRGRTPSPGPGP 363
P+P S P P P + + ++ R+P LR +L+ R PSP P P
Sbjct: 2660 PKPAS--PKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSP 2707
Score = 37.0 bits (84), Expect = 0.032
Identities = 71/248 (28%), Positives = 95/248 (38%), Gaps = 43/248 (17%)
Query: 145 RLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYL-APPGPHD 203
R P ++A + E G PR S + SRSG+ PGL S P R + PG D
Sbjct: 1412 RTPSRERSSSASSPEMKDGL-PRTPS--RRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKD 1468
Query: 204 -PTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAP--------PPTVR-------PRLRV 247
P + GR P K P P RSR +P P R + V
Sbjct: 1469 IPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTV 1528
Query: 248 LTPPLALR------RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHP-LS 300
PL R + L + S +P RS S + T L SR GS P +
Sbjct: 1529 ARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSR--SGSSPEVD 1586
Query: 301 SERQAAPTRAFCSADP--------LPRPPSFVPSLPSPQAQGQAVRQPRLL-RAALALGA 351
S+ + +P R+ + P PR S S P P+A PR L R + + +
Sbjct: 1587 SKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPA-----PRALPRRSRSGSS 1641
Query: 352 PRGRTPSP 359
+GR PSP
Sbjct: 1642 SKGRGPSP 1649
Score = 36.6 bits (83), Expect = 0.041
Identities = 71/291 (24%), Positives = 96/291 (32%), Gaps = 36/291 (12%)
Query: 108 PQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
P+SP + + P + SS SP+ PA E + +
Sbjct: 406 PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKP-----APAPGSHREISSSPTSK 460
Query: 168 NTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP 227
N S +A R + P + R P A G R R T SR P
Sbjct: 461 NRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRG------RSRSRTPTKRGHSRSRSPQWR 514
Query: 228 PCRS--RWVLAPPPTVRPRLRV-LTPPLALRRALPERG-----------SRTPSTRSAVL 273
RS RW + P R R R P + R RG SR+P+TR
Sbjct: 515 RSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSR 574
Query: 274 SGRVAGLGTELTLTPSSRRAHGSHPL-SSERQAAPTRAFCSADPLPRPPSFVPSLPSPQA 332
S A G + TP+ RR+ P R P R R S P+ +
Sbjct: 575 SRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARR-------GRSRSRTPARRRSRT 627
Query: 333 QGQAVRQPRLLRAALALGAPRGRTPS---PGPGPAPALQPYTLTRFPASLS 380
+ R+ R A G R RTP+ PA + + +R PA S
Sbjct: 628 RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS 678
Score = 34.7 bits (78), Expect = 0.16
Identities = 59/240 (24%), Positives = 83/240 (34%), Gaps = 17/240 (7%)
Query: 115 APQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQA 174
AP L SL A +R+ S+ A L R PA AV + P +
Sbjct: 2213 APVPLMSLRTAPAANLASRIPAASAAAM--NLASARTPAIPTAVNLADSRTPAAAAAMNL 2270
Query: 175 SRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP--PCRSR 232
+ T +L R P P + +R P L PP P SR
Sbjct: 2271 ASPRTAVAPSAVNLADPRTP--TAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSR 2328
Query: 233 WVLAPPPT--VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSS 290
AP V PR T P+ + + S SA ++ ++G P S
Sbjct: 2329 TPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLS 2388
Query: 291 --RRAHG--SHPL-----SSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPR 341
R G S PL S +AP+++ +++ P P S + PS A QPR
Sbjct: 2389 AYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPR 2448
Score = 30.4 bits (67), Expect = 3.0
Identities = 58/209 (27%), Positives = 75/209 (35%), Gaps = 22/209 (10%)
Query: 150 RGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGP 209
RG + P +R + S + SRS T P S R P P +
Sbjct: 2063 RGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGS--RTP---------PVALNS 2111
Query: 210 GRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTR 269
R+ PS P PL CRS +L P + R + VL A + G R P +
Sbjct: 2112 SRMSCFSRPSMS-PTPLDRCRSPGMLEPLGSSRTPMSVLQQ--AGGSMMDGPGPRIPDHQ 2168
Query: 270 SAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPS 329
+ A L LT S P S AA A S P P P + SL +
Sbjct: 2169 RTSVPENHAQSRIALALTAISLGTARPPPSMS---AAGLAARMSQVPAPVP---LMSLRT 2222
Query: 330 PQAQGQAVRQPRLLRAALALGAPRGRTPS 358
A A R P AA+ L + RTP+
Sbjct: 2223 APAANLASRIPAASAAAMNLAS--ARTPA 2249
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 59.7 bits (143), Expect = 5e-09
Identities = 84/303 (27%), Positives = 107/303 (35%), Gaps = 62/303 (20%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGS----------- 138
P P Q G G P +P P L G G G + LQ G
Sbjct: 264 PHPSPHPPLQPLTGSAGQPSAPSHAQPP----LHGQGPPGPHS-LQAGPLLQHPGPPQPF 318
Query: 139 ---SGASPRRLPGGRGPAAAFAVEPGTG-QRPRNTSLAQASRSGTVPGLPPASLQPLRLP 194
AS + P G PAAA+ P T Q P + S Q+ + LPPA PL +P
Sbjct: 319 GLPPQASQGQAPLGTSPAAAY---PHTSLQLPASQSALQSQQPPREQPLPPA---PLAMP 372
Query: 195 YLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLT----- 249
++ PP P P + P PP P P + L PPP ++P + T
Sbjct: 373 HIKPP-PTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN---LPPPPALKPLSSLSTHHPPS 428
Query: 250 ---PPLALR---RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
PPL L + LP ++ P GL L P SHP +
Sbjct: 429 AHPPPLQLMPQSQPLPSSPAQPP------------GLTQSQNLPPPP----ASHPPTGLH 472
Query: 304 QAAPTRAFCS-----ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPS 358
Q AP F P P P PS +P A QP AA + G+ G +
Sbjct: 473 QVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSC 532
Query: 359 PGP 361
P P
Sbjct: 533 PLP 535
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 325 PSLPSPQ---AQGQAVRQPRLLRAAL-ALGAPRGRTPSPGPGPAPALQPYTLTRFPASLS 380
PS+PSPQ + + Q ++L+A AL AP G TP+P P Q T P++ +
Sbjct: 159 PSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATA 218
Query: 381 LP 382
+P
Sbjct: 219 VP 220
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 59.7 bits (143), Expect = 5e-09
Identities = 84/303 (27%), Positives = 107/303 (35%), Gaps = 62/303 (20%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGS----------- 138
P P Q G G P +P P L G G G + LQ G
Sbjct: 818 PHPSPHPPLQPLTGSAGQPSAPSHAQPP----LHGQGPPGPHS-LQAGPLLQHPGPPQPF 872
Query: 139 ---SGASPRRLPGGRGPAAAFAVEPGTG-QRPRNTSLAQASRSGTVPGLPPASLQPLRLP 194
AS + P G PAAA+ P T Q P + S Q+ + LPPA PL +P
Sbjct: 873 GLPPQASQGQAPLGTSPAAAY---PHTSLQLPASQSALQSQQPPREQPLPPA---PLAMP 926
Query: 195 YLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLT----- 249
++ PP P P + P PP P P + L PPP ++P + T
Sbjct: 927 HIKPP-PTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN---LPPPPALKPLSSLSTHHPPS 982
Query: 250 ---PPLALR---RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
PPL L + LP ++ P GL L P SHP +
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPP------------GLTQSQNLPPPP----ASHPPTGLH 1026
Query: 304 QAAPTRAFCS-----ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPS 358
Q AP F P P P PS +P A QP AA + G+ G +
Sbjct: 1027 QVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSC 1086
Query: 359 PGP 361
P P
Sbjct: 1087 PLP 1089
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 325 PSLPSPQ---AQGQAVRQPRLLRAAL-ALGAPRGRTPSPGPGPAPALQPYTLTRFPASLS 380
PS+PSPQ + + Q ++L+A AL AP G TP+P P Q T P++ +
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATA 772
Query: 381 LP 382
+P
Sbjct: 773 VP 774
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 59.7 bits (143), Expect = 5e-09
Identities = 84/303 (27%), Positives = 107/303 (35%), Gaps = 62/303 (20%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGS----------- 138
P P Q G G P +P P L G G G + LQ G
Sbjct: 818 PHPSPHPPLQPLTGSAGQPSAPSHAQPP----LHGQGPPGPHS-LQAGPLLQHPGPPQPF 872
Query: 139 ---SGASPRRLPGGRGPAAAFAVEPGTG-QRPRNTSLAQASRSGTVPGLPPASLQPLRLP 194
AS + P G PAAA+ P T Q P + S Q+ + LPPA PL +P
Sbjct: 873 GLPPQASQGQAPLGTSPAAAY---PHTSLQLPASQSALQSQQPPREQPLPPA---PLAMP 926
Query: 195 YLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLT----- 249
++ PP P P + P PP P P + L PPP ++P + T
Sbjct: 927 HIKPP-PTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN---LPPPPALKPLSSLSTHHPPS 982
Query: 250 ---PPLALR---RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
PPL L + LP ++ P GL L P SHP +
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPP------------GLTQSQNLPPPP----ASHPPTGLH 1026
Query: 304 QAAPTRAFCS-----ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPS 358
Q AP F P P P PS +P A QP AA + G+ G +
Sbjct: 1027 QVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSC 1086
Query: 359 PGP 361
P P
Sbjct: 1087 PLP 1089
Score = 32.3 bits (72), Expect = 0.78
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 325 PSLPSPQ---AQGQAVRQPRLLRAAL-ALGAPRGRTPSPGPGPAPALQPYTLTRFPASLS 380
PS+PSPQ + + Q ++L+A AL AP G TP+P P Q T P++ +
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATA 772
Query: 381 LP 382
+P
Sbjct: 773 VP 774
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 58.2 bits (139), Expect = 1e-08
Identities = 87/320 (27%), Positives = 118/320 (36%), Gaps = 52/320 (16%)
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQ--GGSSGAS-PRRLPGGRGPAAAFAVEPGT 162
G+P+ P P P AL L G G + + GG GA+ P P + G
Sbjct: 31 GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGR 90
Query: 163 GQRP---RNTSLAQASRSGTVPGLP---PASLQPLRLPYLAPPGPHDPTSRGP------- 209
G+R +NTS S G G P + LR+ + +RG
Sbjct: 91 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI------SAEETVARGKATEAPKR 144
Query: 210 -----GRLLTCEPPSRKLPPPLPPCRSR------WVLAPPPTVRPRLRVLTPPLALRRAL 258
G P+ P P RSR + P P+ RPR PP R
Sbjct: 145 SALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR-----PPTEGPRKS 199
Query: 259 PERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLP 318
S +T + + R G L S + + PLSS ++ P SA P
Sbjct: 200 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP-----SARGTP 254
Query: 319 RPPSFVPSLPSPQAQGQAVRQPRLLR----AALALGAPRGR---TPSPGPGPAPALQPYT 371
R P+ PS P P+ QA+R P++ AA ALG TPSP P+P+ P
Sbjct: 255 RAPAH-PSQPKPKGL-QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSL 312
Query: 372 LTRFPASLSLPDLVFTSVGS 391
T + P TS+GS
Sbjct: 313 QTLPSPPATPPSQATTSLGS 332
Score = 53.1 bits (126), Expect = 4e-07
Identities = 88/301 (29%), Positives = 104/301 (34%), Gaps = 70/301 (23%)
Query: 108 PQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
P SP P +P A P S ASP P P Q P
Sbjct: 416 PASP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP----------QAPP 464
Query: 168 NTSLAQASRSGTVPGLPPA----SLQPLRLPYLAPPG--PHDPTSRGPGRLLTCEPPSRK 221
+ + P PPA LQ L P + PG P P++ P L PP
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 222 --------LPPPLPPCRSRWVLAP--PPTVRPRLRVLTP--PLALRRALPERGSRTPSTR 269
PP PP S + AP PPT P V P LAL P SR+PS+
Sbjct: 525 PVLAAPLLQVPPSPPA-SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS- 582
Query: 270 SAVLSGR-VAGLGTELTLTPSSRRAHGS-------------------HPLSSERQAAPTR 309
LSG +AG + T TP R + S HP + R AP
Sbjct: 583 --TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPL 640
Query: 310 AFCSAD--PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG---PGPA 364
AF A PLP PP+ P A G L P TP+PG PGP+
Sbjct: 641 AFRGAPGAPLPWPPATGPG----SADG--------LCTIYETEGPESATPAPGALDPGPS 688
Query: 365 P 365
P
Sbjct: 689 P 689
Score = 51.6 bits (122), Expect = 1e-06
Identities = 79/276 (28%), Positives = 105/276 (38%), Gaps = 39/276 (14%)
Query: 110 SPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNT 169
+P P AP ALA L P +A S SP P + P A P +
Sbjct: 352 TPPPQAPPALA--LPPLQA---PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 406
Query: 170 SLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPC 229
QA P PPAS P P PP P+ P + PPS PP+ P
Sbjct: 407 PPVQA------PFSPPAS--PPVSPSATPPSQAPPSLAAPPLQV---PPSPPASPPMSPS 455
Query: 230 RSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPS 289
+ APPP P L++ PP AL TP ++ L A + +PS
Sbjct: 456 ATPPPQAPPPLAAPPLQLAKPPPQAPPAL-----ATPPLQA--LPSPPASFPGQAPFSPS 508
Query: 290 SRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALAL 349
+ S P+S P A PL + P P+ P+ QA R+P ++
Sbjct: 509 A-----SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP----RRPPTPGPDTSV 559
Query: 350 GAPR-GRTPSPGPGPAPALQPYTLTRFPASLSLPDL 384
PR +PGP P P+ P ++LS PDL
Sbjct: 560 SGPRLTLALAPGPPPPPSRSP------SSTLSGPDL 589
Score = 48.5 bits (114), Expect = 1e-05
Identities = 87/319 (27%), Positives = 114/319 (35%), Gaps = 66/319 (20%)
Query: 88 GFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLP 147
G P P +++ G G P+ P+ P G R + S ++ P
Sbjct: 161 GTPSPAMARRSRAAGTEVGLPRPAPSARPR-------PPTEGPRKSVSSASEHSTTEPSP 213
Query: 148 GGRGPAAAFAVEPGTGQRPRNTSLAQAS-------RSG-TVPGLP----------PASLQ 189
R +A G QRP + SL+ ++ RSG + G P P LQ
Sbjct: 214 AARRRPSA----GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 269
Query: 190 PLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLT 249
LR P + PP + GP PS PP S L PP T
Sbjct: 270 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPA--------T 321
Query: 250 PPLALRRALPERGSRT-PSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPT 308
PP +A GS T +T S + S ++ L T P + A PL QA P+
Sbjct: 322 PP---SQATTSLGSPTLQATHSFLPSPPLSPLATP---PPQAPPALALPPL----QAPPS 371
Query: 309 RAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSP---GPGPAP 365
P PP + PSPQA P L L L AP PSP P P
Sbjct: 372 -------PPASPPLSPLATPSPQA-------PNALAVHL-LQAPFSPPPSPPVQAPFSPP 416
Query: 366 ALQPYTLTRFPASLSLPDL 384
A P + + P S + P L
Sbjct: 417 ASPPVSPSATPPSQAPPSL 435
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/173 (30%), Positives = 71/173 (41%), Gaps = 31/173 (17%)
Query: 204 PTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRV-------LTPPLALRR 256
P +R PG L P S + PPP+ P R + A R L T P + R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 257 ALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADP 316
A P R SR P+ SGR RA + S ++P RA + P
Sbjct: 77 AGPTRTSRPPA------SGR-------------GERAPPAKNTSPGPVSSPGRASGTTRP 117
Query: 317 LPRPPSFVP-SLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPG-PAPAL 367
P + S A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 167
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 57.8 bits (138), Expect = 2e-08
Identities = 83/305 (27%), Positives = 108/305 (35%), Gaps = 61/305 (20%)
Query: 69 SPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCA----PQALASL-L 123
+P + ++ + + R R P G + G TP+S GP P SL
Sbjct: 1024 TPPKSEDKVSENGGLRFPRNTERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLER 1083
Query: 124 GPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFA-VEPGTGQRPRNTSLAQASRSGTVPG 182
P + + GG + PG GPA +EPGT +R A +G P
Sbjct: 1084 APAPSAVVSSRNGGETA------PGPLGPAPKNGTLEPGTERR--------APETGGAPR 1129
Query: 183 LPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPP----SRKLPPPLPPCRSRWVLAPP 238
P A L AP G GPG + + +R PPP P L PP
Sbjct: 1130 APGAGRLDLGSGGRAPVGTGTAPGGGPGSGVDAKAGWVDNTRPQPPPPP-------LPPP 1182
Query: 239 PTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHP 298
P +PR PP A PE P +R AG T L + P
Sbjct: 1183 PEAQPRRLEPAPPRARPEVAPEGEPGAPDSR--------AGGDTAL--------SGDGDP 1226
Query: 299 LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPS 358
ER+ P P L PQ + ++ RL R +LAL P TP
Sbjct: 1227 PKPERKG------------PEMPRLFLDLGPPQGNSEQIK-ARLSRLSLAL-PPLTLTPF 1272
Query: 359 PGPGP 363
PGPGP
Sbjct: 1273 PGPGP 1277
Score = 40.0 bits (92), Expect = 0.004
Identities = 69/248 (27%), Positives = 87/248 (35%), Gaps = 69/248 (27%)
Query: 146 LPGGRGPAAA-FAVEPGTG--QRPRNTSLAQASRSGT--VPGLPPASLQPLRL-PYLAPP 199
LP RG A A + P G P + S +A R +P PPAS P L P +
Sbjct: 710 LPLERGDAVAGWGGHPALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAA 769
Query: 200 GPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALP 259
P P RGP PP+ PPP PP R+ P P PP A+ A P
Sbjct: 770 APQYP-GRGP-------PPAP--PPPPPPPRA----PADPAASP-----DPPSAV--ASP 808
Query: 260 ERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPR 319
G +P + +G TE +P G ++E + P PR
Sbjct: 809 GSGLSSPGPKPG-----DSGYETETPFSPEGAFPGGG---AAEEEGVPR---------PR 851
Query: 320 PPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPASL 379
P P P P GAPR P P PGP P P F +
Sbjct: 852 AP---PEPPDP-------------------GAPR---PPPDPGPLPLPGPREKPTFVVQV 886
Query: 380 SLPDLVFT 387
S L+ +
Sbjct: 887 STEQLLMS 894
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 56.6 bits (135), Expect = 4e-08
Identities = 94/325 (28%), Positives = 122/325 (37%), Gaps = 74/325 (22%)
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQ--GGSSGA-----SPR-----------RLP 147
G+P+ P P P AL L G G + + GG GA +PR R P
Sbjct: 31 GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNP 90
Query: 148 GGRGPAAAFAVEPGTGQR---PRNTSLAQASRSGTVPGLP---PASLQPLRLPYLAPPGP 201
R PA+ G G+R +NTS S G G P + LR+
Sbjct: 91 ASRPPAS------GRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI------SA 138
Query: 202 HDPTSRG------------PGRLLTCEPPSRKLPPPLPPCRSR------WVLAPPPTVRP 243
+ +RG G P+ P P RSR + P P+ RP
Sbjct: 139 EETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP 198
Query: 244 RLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
R PP R S +T + + R G L S + + PLSS
Sbjct: 199 R-----PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS-- 251
Query: 304 QAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLL----RAALALGAPRGRTPSP 359
P R+ SA PR P+ PS P P+ QA+R P++ AA ALG P +P
Sbjct: 252 ---PARSGPSARGTPRAPAH-PSQPKPKGL-QALRPPQVTPPRKDAAPALG-PLSSSPLA 305
Query: 360 GPGPAPALQ---PYTLTRFPASLSL 381
P P+ ALQ P TL P S SL
Sbjct: 306 TPSPSAALQSQAPPTLPATPHSSSL 330
Score = 53.1 bits (126), Expect = 4e-07
Identities = 88/301 (29%), Positives = 104/301 (34%), Gaps = 70/301 (23%)
Query: 108 PQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
P SP P +P A P S ASP P P Q P
Sbjct: 455 PASP-PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP----------QAPP 503
Query: 168 NTSLAQASRSGTVPGLPPA----SLQPLRLPYLAPPG--PHDPTSRGPGRLLTCEPPSRK 221
+ + P PPA LQ L P + PG P P++ P L PP
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 222 --------LPPPLPPCRSRWVLAP--PPTVRPRLRVLTP--PLALRRALPERGSRTPSTR 269
PP PP S + AP PPT P V P LAL P SR+PS+
Sbjct: 564 PVLAAPLLQVPPSPPA-SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS- 621
Query: 270 SAVLSGR-VAGLGTELTLTPSSRRAHGS-------------------HPLSSERQAAPTR 309
LSG +AG + T TP R + S HP + R AP
Sbjct: 622 --TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPL 679
Query: 310 AFCSAD--PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG---PGPA 364
AF A PLP PP+ P A G L P TP+PG PGP+
Sbjct: 680 AFRGAPGAPLPWPPATGPG----SADG--------LCTIYETEGPESATPAPGALDPGPS 727
Query: 365 P 365
P
Sbjct: 728 P 728
Score = 51.6 bits (122), Expect = 1e-06
Identities = 79/276 (28%), Positives = 105/276 (38%), Gaps = 39/276 (14%)
Query: 110 SPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNT 169
+P P AP ALA L P +A S SP P + P A P +
Sbjct: 391 TPPPQAPPALA--LPPLQA---PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 445
Query: 170 SLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPC 229
QA P PPAS P P PP P+ P + PPS PP+ P
Sbjct: 446 PPVQA------PFSPPAS--PPVSPSATPPSQAPPSLAAPPLQV---PPSPPASPPMSPS 494
Query: 230 RSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPS 289
+ APPP P L++ PP AL TP ++ L A + +PS
Sbjct: 495 ATPPPQAPPPLAAPPLQLAKPPPQAPPAL-----ATPPLQA--LPSPPASFPGQAPFSPS 547
Query: 290 SRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALAL 349
+ S P+S P A PL + P P+ P+ QA R+P ++
Sbjct: 548 A-----SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP----RRPPTPGPDTSV 598
Query: 350 GAPR-GRTPSPGPGPAPALQPYTLTRFPASLSLPDL 384
PR +PGP P P+ P ++LS PDL
Sbjct: 599 SGPRLTLALAPGPPPPPSRSP------SSTLSGPDL 628
Score = 47.0 bits (110), Expect = 3e-05
Identities = 94/345 (27%), Positives = 122/345 (35%), Gaps = 75/345 (21%)
Query: 70 PTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAG 129
PTR AG+S A P GRG + SPGP + PG+A
Sbjct: 79 PTRS----AGTSSRNPASRPPASGRGERAPP-----AKNTSPGPVS--------SPGRAS 121
Query: 130 CRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASR---SGTVPGLPPA 186
TR G G R+ A A E P+ ++L+ +R SG PG P
Sbjct: 122 GTTR--PGPLGQKGLRISAEETVARGKATEA-----PKRSALSAGARRDTSGPTPGTPSP 174
Query: 187 SLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLR 246
++ SR G + LP P P R R PPT PR
Sbjct: 175 AMAR--------------RSRAAGTEVG-------LPRPAPSARPR-----PPTEGPRKS 208
Query: 247 VLTP---------PLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRR----- 292
V + P A RR G + P++RS LS L + PS+R
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRS--LSSSATPLSSPARSGPSARGTPRAP 266
Query: 293 AHGSHP----LSSERQAAPTRAFCSADPLPRPPSFVP-SLPSPQAQGQAVRQPRLLRAAL 347
AH S P L + R T A P P S P + PSP A Q+ P L
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPH 326
Query: 348 ALGAP-RGRTPSPGPGPAPALQPYTLTRFPASLSLPDLVFTSVGS 391
+ + TP P P+P+ P T + P TS+GS
Sbjct: 327 SSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 371
Score = 45.8 bits (107), Expect = 7e-05
Identities = 54/175 (30%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 204 PTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALR------RA 257
P +R PG L P S + PPP+ P R + A R PLA R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGR-------KPLAERAGGIGGAT 69
Query: 258 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQ---AAPTRAFCSA 314
+PE R TRSA S R + P+S R + P + ++P RA +
Sbjct: 70 IPESAPRAGPTRSAGTSSR-----NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124
Query: 315 DPLPRPPSFVP-SLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPG-PAPAL 367
P P + S A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 176
Score = 45.1 bits (105), Expect = 1e-04
Identities = 76/294 (25%), Positives = 98/294 (33%), Gaps = 56/294 (19%)
Query: 88 GFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLP 147
G P P +++ G G P+ P+ P G R + S ++ P
Sbjct: 170 GTPSPAMARRSRAAGTEVGLPRPAPSARPR-------PPTEGPRKSVSSASEHSTTEPSP 222
Query: 148 GGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSR 207
R +A G QRP + SL S S T P S R AP P P +
Sbjct: 223 AARRRPSA----GGGLQRPASRSL---SSSATPLSSPARSGPSARGTPRAPAHPSQPKPK 275
Query: 208 GPGRLLTCE--PPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRT 265
G L + PP + P L P S + P P+ AL+ P T
Sbjct: 276 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA-----------ALQSQAPPTLPAT 324
Query: 266 PSTRSAVLSGRVAGLGTELTLTPSSRRAHGS-HPLSSERQAAPTRAFCSADP-------- 316
P + S L T L L P S A S L S P++A S
Sbjct: 325 PHSSSLTCQ-----LATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Query: 317 -LPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQP 369
LP PP + P PQA AL P + P P P +P L P
Sbjct: 380 FLPSPPLSPLATPPPQAPP-------------ALALPPLQAP-PSPPASPPLSP 419
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.2 bits (134), Expect = 5e-08
Identities = 77/303 (25%), Positives = 98/303 (32%), Gaps = 47/303 (15%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGT 162
GG TP G P A+ P + T G+S P +G AA + G
Sbjct: 998 GGPATPSPKGAPTPPAVTPP-SPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRK- 221
P T L P L A P P GP P+ +G PPS K
Sbjct: 1057 PTTPAAT-LPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Query: 222 ------------LPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTR 269
P PP + PPP P TPP P+ G TP +
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPP------SPKGGLATPPPK 1169
Query: 270 SAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPS 329
G T TP S + + P + APT P PPS L +
Sbjct: 1170 ---------GAPTTPAATPPSPKGGLATP---SPKGAPT------TPAATPPSPKGGLAT 1211
Query: 330 PQAQG---QAVRQPRLLRAALALGAPRG--RTPS---PGPGPAPALQPYTLTRFPASLSL 381
P +G P + LA +P+G TP+ P P PA P P + +
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATP 1271
Query: 382 PDL 384
P L
Sbjct: 1272 PSL 1274
Score = 52.4 bits (124), Expect = 7e-07
Identities = 80/320 (25%), Positives = 119/320 (37%), Gaps = 40/320 (12%)
Query: 107 TPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGA--SPRR---LPGGRGPAAAFAVEPG 161
TP S G P +S GP +GG + SP+R +P +G + AV P
Sbjct: 1353 TPSSKG--GPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPL 1410
Query: 162 TGQRPRNTSLAQASRSG---------TVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRL 212
+ P+ +R G T P + P SL+ GP P+S+G L
Sbjct: 1411 S---PKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Query: 213 LTCEPPSRKLPP-PLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSA 271
PPS K PP P S P T P P A+ + P+ TPS+R
Sbjct: 1468 PAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLP--AVIPSSPKEVPATPSSRRD 1525
Query: 272 VLSGRVAGLG--TELTLTPSSRRAHGSHPLSSERQ--AAPTRAFCSADPLPRPPSFVPSL 327
++ L T TL P + + S ++ A PT A P + S P++
Sbjct: 1526 PIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAV 1585
Query: 328 PSPQAQGQAVRQPRLLRAALALGAPRG-------RTPSPGPGPA-------PALQPYTLT 373
+G + L+ A+ +P+ PSP GPA P P T +
Sbjct: 1586 TPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPS 1645
Query: 374 RFPASLSLPDLVFTSVGSSL 393
S + P V +G+++
Sbjct: 1646 SLKDSPTSPASVTCKMGATV 1665
Score = 47.0 bits (110), Expect = 3e-05
Identities = 83/319 (26%), Positives = 112/319 (35%), Gaps = 62/319 (19%)
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRG---PAAAFAVEPGT 162
G P +P P L P G T + A+P GG P A T
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKGAPT-----TPAATPPSPKGGLATPSPKGAPTTPAAT 1201
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRK- 221
P+ LA S G PA+ P LA P P +G PPS K
Sbjct: 1202 PPSPKG-GLATPSPKGAPT--TPAATPPSPKGGLATPSP-----KGAPTTPAATPPSPKG 1253
Query: 222 ---LPPP---------LPPCRSRWVLAPPPTVRPRLRVLTPPLAL--RRALPERGSRT-- 265
PPP PP + PP P V+TPP P +G+ T
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 266 ----PSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSS-ERQAAPTRAFCSADPLPRP 320
PS + + + G T +TP S + + P ++ + PT S+ P P
Sbjct: 1314 AATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTP--SSKEGPTP 1371
Query: 321 PSFVPS--------LPSPQAQGQAVRQPR---------LLRAALALGAPRGR----TPSP 359
P+ PS PSP+ +G A+ P+ L A P R TPS
Sbjct: 1372 PAATPSHKGGPAMTPPSPK-RGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSK 1430
Query: 360 GPGPAPALQPYTLTRFPAS 378
G PA+ P +L + PA+
Sbjct: 1431 GDLTPPAVTPVSLKKAPAT 1449
Score = 39.3 bits (90), Expect = 0.006
Identities = 76/309 (24%), Positives = 106/309 (34%), Gaps = 44/309 (14%)
Query: 102 GGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRR----LPGGRGPAAAFA 157
G GT + G ALA + K C T G S+ AS + L P +
Sbjct: 743 GTPPGTKKVDGISHTSALAPVASSPKE-CPTEDSGASATASSKGTLTYLADSPSPLGV-S 800
Query: 158 VEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYL------------APPGPHDPT 205
V P T + P A T G + + P+ +L +P H PT
Sbjct: 801 VSPQTKRPPTKKGSAGPD---TPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT 857
Query: 206 SRGP------GRLLTCEPPSRKLPPPLPPCRSRWVLA----PPPTVRPRLRVLTPPLALR 255
P + P LPP P S L P T P+ P L++
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQ---APALSMT 914
Query: 256 RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSAD 315
+ P++ TP+ + S G T TP S + P + + APT +
Sbjct: 915 SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK---GGPATPSPKWAPTPPAAT-- 969
Query: 316 PLPRPPSFVPSLPSPQ-AQGQAVRQPRLLRAALALGAPRGR-TPSPGPGPAPALQPYTLT 373
P P P+ PSP+ A P + A +P+G TP P+P P T
Sbjct: 970 --PPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSP-AAT 1026
Query: 374 RFPASLSLP 382
FP S P
Sbjct: 1027 PFPKGASTP 1035
Score = 37.4 bits (85), Expect = 0.024
Identities = 46/203 (22%), Positives = 75/203 (36%), Gaps = 21/203 (10%)
Query: 81 SCGRAARGFPEPGRGGKTQ------KWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRL 134
S A FP P T + GT P P AP L +L+GP + L
Sbjct: 59 SAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALAL 118
Query: 135 QGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLP 194
+ + P P A A+ P + Q+ + +V S+ L P
Sbjct: 119 ASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAP 178
Query: 195 YLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLAL 254
+AP P ++ P ++ P+ K P PPC +++ P +TP ++
Sbjct: 179 -IAPSEPKTNLNKVPSEVV----PNPK-GTPSPPC----IVSTVP-----YHCVTPMASI 223
Query: 255 RRALPERGSRTPSTRSAVLSGRV 277
+ + TP+T A+ S +V
Sbjct: 224 QSGVASLPQTTPTTTLAIASPQV 246
Score = 30.0 bits (66), Expect = 3.9
Identities = 69/313 (22%), Positives = 103/313 (32%), Gaps = 70/313 (22%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALA-SLLGPGKAGCRTRLQGGSSGASPRRLPG 148
P P +G T GTP SP P P +L S P C+ G + + + LP
Sbjct: 1622 PSPEKGPATP---APKGTPTSP-PVTPSSLKDSPTSPASVTCK---MGATVPQASKGLPA 1674
Query: 149 GRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRG 208
+GP A V P +T + A PT +G
Sbjct: 1675 KKGPTALKEVL--VAPAPESTPIITA-----------------------------PTRKG 1703
Query: 209 PGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPST 268
P ++K PP + P P+ + + PL+ P + S+
Sbjct: 1704 P--------QTKKSSATSPP------ICPDPSAKNGSK---GPLSTVAPAPLLPVQKDSS 1746
Query: 269 RSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLP 328
++A G+ A + L P +A ++ + P S P PP +P P
Sbjct: 1747 KTA--KGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP 1804
Query: 329 SPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPASLSLPDLVFTS 388
SP +Q L L SP APA + L P P+ +
Sbjct: 1805 SPVPTLPPKQQFLPSSPGLVL-------ESPSKPLAPADEDELLPLIP-----PEPISGG 1852
Query: 389 VGSSLVICLVPTP 401
V V+ +PTP
Sbjct: 1853 VPFQSVLVNMPTP 1865
Score = 29.6 bits (65), Expect = 5.0
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 42/175 (24%)
Query: 253 ALRRALPERGSRTPSTRSAVLSGRVAGLGTE-LTLTPSSRRAHGSHPLSSERQAAP--TR 309
A + LP+ + T + A LG TL P A PLS+ QA+P +
Sbjct: 11 ATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSP 70
Query: 310 AFCSADPL------------------PRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGA 351
+ ++ PL P P+F+P+L P + AALAL +
Sbjct: 71 STIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPP----------ISPAALALAS 120
Query: 352 P------RGRTPSPGPGPAPALQPYTLTR---FPASL--SLPDLVFTSVGSSLVI 395
P +G S P AL P+++ + FP +L S P + GS + +
Sbjct: 121 PMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITL 175
Score = 28.9 bits (63), Expect = 8.6
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 15/91 (16%)
Query: 321 PSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSP-GPGP-----------APALQ 368
P+ LP PQA+ + L ALG P P P P P +P
Sbjct: 10 PATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPS 69
Query: 369 PYTLTRFPASLSLPDLVFTSVGSSLVICLVP 399
P T+ P + P +S G++L + P
Sbjct: 70 PSTIASTPLEVPFPQ---SSSGTALPLGTAP 97
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 56.2 bits (134), Expect = 5e-08
Identities = 67/268 (25%), Positives = 91/268 (33%), Gaps = 26/268 (9%)
Query: 126 GKAGCRTRLQGGSSGA-SPRRLPGGRGPAAAF--AVEPGTGQRPRNTSLAQASRSGTVPG 182
G+ G R R S + SPR+ P + P +R R+ S A R P
Sbjct: 515 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPT 574
Query: 183 LPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVR 242
PP P P P P + R PP R+ P PP + R +PP
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP---- 630
Query: 243 PRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSE 302
P+ RV P +R+ P R+PS S G T +P + H P
Sbjct: 631 PKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRA 690
Query: 303 RQAA----PTRAFCSA--------DPLPRPPSFVPSLPSPQ-------AQGQAVRQPRLL 343
Q + P R S+ P RP V P P+ Q+VR+
Sbjct: 691 PQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSS 750
Query: 344 RAALALGAPRGRTPSPGPGPAPALQPYT 371
R+ P + P P P + P T
Sbjct: 751 RSVSGSPEPAAKKPPAPPSPVQSQSPST 778
Score = 38.5 bits (88), Expect = 0.011
Identities = 55/214 (25%), Positives = 80/214 (37%), Gaps = 34/214 (15%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGG 149
P P + K +K T P+S ++ P R R + S SPRR P
Sbjct: 259 PSPEKNSKKEKEKEKT-RPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP 317
Query: 150 RGPAAAFAVEPGTGQRP-----RNTSLAQASR--SGTVPGLPPASLQPLRLPYLAPPGPH 202
R + P P R+ S + R S ++ G +S +
Sbjct: 318 RRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS---------SSSRSR 368
Query: 203 DPTSRGPGRLLTCEPP--SRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPE 260
P + P R T PP +R+L P P R R +PP T P+ R P+
Sbjct: 369 SPPKKPPKR--TSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTR--------HSPTPQ 418
Query: 261 RGSRTPSTRSAVLSGRVAG-----LGTELTLTPS 289
+ +RT +R +V GR +G GTE +PS
Sbjct: 419 QSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPS 452
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 55.8 bits (133), Expect = 7e-08
Identities = 74/237 (31%), Positives = 91/237 (38%), Gaps = 30/237 (12%)
Query: 160 PGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPS 219
P PR S A S VP PP+S P P L+P P P L PP
Sbjct: 645 PAPQPAPRTLSHWSALLSPPVPPRPPSSGPP-PAPPLSPALSGLPRPASPYGSLRRHPPP 703
Query: 220 RKLPPPLPPC--RSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRV 277
P +PP S W PP V P + PP L A P G R PS R + G
Sbjct: 704 WAAPAHVPPAPQASWWAFVEPPAVSPEV----PPDLL--AFP--GPR-PSFRGSRRRGAA 754
Query: 278 AGLGTELTLTPSSRRAHGSHPLSSER---QAAPTRAFCSADPLPRP-------PSFVPSL 327
G +P + R PL+S + +++P +CS P P P P L
Sbjct: 755 FGFP---GASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFL 811
Query: 328 PSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFP--ASLSLP 382
P + P RAA LG P +P PG P P P L P +SL+LP
Sbjct: 812 PPARRPRSLQESPAPRRAAGRLGPP--GSPLPG-SPRPPSPPLGLCHSPRRSSLNLP 865
Score = 35.8 bits (81), Expect = 0.070
Identities = 62/239 (25%), Positives = 78/239 (32%), Gaps = 32/239 (13%)
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKL 222
G RP + + PG P + + LA P P +S G G PPS +L
Sbjct: 740 GPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQL 799
Query: 223 --------PPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGS------RTPST 268
PP LPP R L P R L PP + P S +P
Sbjct: 800 SLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHSPRR 859
Query: 269 RSAVLSGRVAGLGTELTLTPSSR-RAHGSHPLSSERQAAPTRAFCSADPLPRPP--SFVP 325
S L R+ L+ P+ + P +A RA PR P S P
Sbjct: 860 SSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPLEHRESPREPEDSETP 919
Query: 326 SLPSPQAQGQAVRQPRLLRAAL----ALGAPRGRTPSP-----------GPGPAPALQP 369
P A V P R G+ RG + P GP P+P LQP
Sbjct: 920 WTVPPLAPSWDVDMPPTQRPPSPWPGGAGSRRGFSRPPPVPENPFLQLLGPVPSPTLQP 978
Score = 35.0 bits (79), Expect = 0.12
Identities = 72/282 (25%), Positives = 99/282 (35%), Gaps = 35/282 (12%)
Query: 79 GSSCGRAARGFPEPGRGGKTQKWGGGTGTPQ-----SPG-----PCAPQA--LASLLGPG 126
GS AA GFP ++ +PQ SPG P AP + L+ GP
Sbjct: 747 GSRRRGAAFGFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPF 806
Query: 127 KAGC---RTRLQGGSSGASPRRLPGGRGPAAA---FAVEP-----GTGQRPRNTSLAQAS 175
+ R + +PRR G GP + + P G PR +SL S
Sbjct: 807 QPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPS 866
Query: 176 RSG----TVPGLPPASLQP-LRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCR 230
R + P +++P +RLP+ PP + R EP + P +PP
Sbjct: 867 RLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPLEHRESPREPEDSETPWTVPPLA 926
Query: 231 SRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSS 290
W + PPT RP P A RG P ++ G TL P
Sbjct: 927 PSWDVDMPPTQRP------PSPWPGGAGSRRGFSRPPPVPENPFLQLLGPVPSPTLQPED 980
Query: 291 RRAHGSHP-LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQ 331
A + L + P + SA P P P +L PQ
Sbjct: 981 PAADMTRVFLGRHHEPGPGQLTKSAGPTPEKPEEEATLGDPQ 1022
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 55.8 bits (133), Expect = 7e-08
Identities = 88/304 (28%), Positives = 108/304 (35%), Gaps = 48/304 (15%)
Query: 92 PGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRL-----QGGSSGASPRRL 146
P R T GG G+ P QA +L GPG RL GGSS SPR L
Sbjct: 148 PCRVPPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGL-FPPRLADPVPSGGSS--SPRFL 204
Query: 147 PGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVP---GLPPASLQPLRLPYLAPPGPHD 203
P G P+ A P + + A RS VP G PPA P+ + P D
Sbjct: 205 PRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPA-------PHASSSPPSD 257
Query: 204 PTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGS 263
P L C PPPLPP + P P +P + T L L P G+
Sbjct: 258 PP------LFHCS--DALTPPPLPP-SNNLPAHPGPASQPPVSSATMHLPLVLG-PLGGA 307
Query: 264 RTPSTRSAVLSGRVAGLGTELTLTPS--SRRAHGSHPLSSERQAAPTRAFCSADPLPRPP 321
T V G G L S S A HP P P + P
Sbjct: 308 PT-----------VEGPGAPPFLASSLLSAAAKAQHP-----PLPPPSTLQGRRPRAQAP 351
Query: 322 SFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPASLSL 381
S S +Q + R P + R G R P PAP QP++L P+ L
Sbjct: 352 SASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRP-RAPAPVPQPFSLPE-PSQPIL 409
Query: 382 PDLV 385
P ++
Sbjct: 410 PSVL 413
Score = 41.2 bits (95), Expect = 0.002
Identities = 73/289 (25%), Positives = 96/289 (33%), Gaps = 45/289 (15%)
Query: 103 GGTGTPQSPG-PCAPQAL-ASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEP 160
GG G P +PG P P L ASLL P + A P L P A
Sbjct: 581 GGPGPPLAPGEPEGPSLLVASLLPPPPSDLLP-----PPSAPPSNLLASFLPLLALGPTA 635
Query: 161 GTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLL---TCEP 217
G G+ A +G G P + L L P L PP PT L T +P
Sbjct: 636 GDGE-------GSAEGAGGPSGEPFSGLGDLS-PLLFPPLSAPPTLIALNSALLAATLDP 687
Query: 218 PSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRV 277
PS P P C PPT P + P R P S +L +
Sbjct: 688 PSGTPPQP---CVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASL 744
Query: 278 AGLGTELTLTPSSRRA-------------------HGSHPLSSERQAAPTRAFCSADPLP 318
G + LT +P + + G P ++P + +P
Sbjct: 745 LGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSLQIP 804
Query: 319 RPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPAL 367
P LP P++ A+ +P R L+ AP +P P P P L
Sbjct: 805 PEQPEAPCLP-PESPASAL-EPEPARPPLSALAPPHGSPDP---PVPEL 848
Score = 33.9 bits (76), Expect = 0.27
Identities = 79/325 (24%), Positives = 97/325 (29%), Gaps = 65/325 (20%)
Query: 106 GTPQSPGPCAPQALASLLGPGKA--------------GCRTRLQGGSSGASPRRLPGGRG 151
G P GP AP LAS L A G R R Q S+ S P R
Sbjct: 306 GAPTVEGPGAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRR 365
Query: 152 PA---AAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQP-----LRLPYLAPPGPH- 202
P F + G G + S +A P P QP L L L PGP
Sbjct: 366 PRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPSH 425
Query: 203 ----------DPTSRGPGRLLTCEPPSRKLP------------------PPLPPCRSRWV 234
D P L + PP + P P PP S+
Sbjct: 426 SDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAP 485
Query: 235 LAPPPTVRPRLRVL---------TPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELT 285
+ P P ++ L PPLA A P +P A+ G+ L
Sbjct: 486 VVPSPVLQSPSEGLGMGAGPACPLPPLAGGEAFP---FPSPEQGLALSGAGFPGMLGALP 542
Query: 286 LTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRA 345
L S + S L+ T P P P P P P P LL A
Sbjct: 543 LPLSLGQPPPSPLLNHSLFGVLTGG--GGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLVA 600
Query: 346 ALALGAPRGRTPSPGPGPAPALQPY 370
+L P P P P+ L +
Sbjct: 601 SLLPPPPSDLLPPPSAPPSNLLASF 625
Score = 33.1 bits (74), Expect = 0.46
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 318 PRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGA------PRGRTPSPGPGPAPALQPYT 371
P PPS + P+ G + PRL + G+ PRG PSP P P PA+
Sbjct: 166 PEPPSVSQAFPTLAGPG-GLFPPRLADPVPSGGSSSPRFLPRGNAPSPAPPPPPAI---- 220
Query: 372 LTRFPASLSLPDLVFTSVGSSLVICLVPTPL 402
SL+ P + G++L LVP+ L
Sbjct: 221 ------SLNAPSY---NWGAALRSSLVPSDL 242
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 54.7 bits (130), Expect = 1e-07
Identities = 93/320 (29%), Positives = 118/320 (36%), Gaps = 51/320 (15%)
Query: 105 TGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQ 164
T PQ+P A L L P + T + L P A+ + P
Sbjct: 589 TPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATP 648
Query: 165 RPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPH-----DPTSRGPGRLLTCE--- 216
P+ + A A P PP S P++ P+ P P P S+ P L
Sbjct: 649 SPQAPN-ALAVHLLQAPFSPPPS-PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 706
Query: 217 PPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGR 276
PPS PP+ P + APPP P L+V P A + P S TP R L
Sbjct: 707 PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA---SPPMSPSATPPPRVPPLLA- 762
Query: 277 VAGLGTELTLTPSSRRAHGSHPLSS-ERQAAPTRAFCSADPLPRPPSFVP---------S 326
L + PS + PL+ QA P A LP PP+ P S
Sbjct: 763 ----APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 818
Query: 327 LP-----SPQAQGQAVRQPRLLR------AALALGAPRGRTPSPGP-----GPAPAL--- 367
LP +P Q V LL+ A+ L APR R P+PGP GP L
Sbjct: 819 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR-RPPTPGPDTSVSGPRLTLALA 877
Query: 368 --QPYTLTRFPAS-LSLPDL 384
P +R P+S LS PDL
Sbjct: 878 PGPPPPPSRSPSSTLSGPDL 897
Score = 54.3 bits (129), Expect = 2e-07
Identities = 91/304 (29%), Positives = 107/304 (35%), Gaps = 70/304 (23%)
Query: 105 TGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQ 164
T PQ+P P A L P S SP P R P A
Sbjct: 721 TPPPQAPPPLAAPPLQVPPSPP----------ASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Query: 165 RPRNTSLAQASRSGTVPGLPPA----SLQPLRLPYLAPPG--PHDPTSRGPGRLLTCEPP 218
P SL + + P PPA LQ L P + PG P P++ P L PP
Sbjct: 771 SPP-ASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 219 SRK--------LPPPLPPCRSRWVLAP--PPTVRPRLRVLTP--PLALRRALPERGSRTP 266
PP PP S + AP PPT P V P LAL P SR+P
Sbjct: 830 QAPPVLAAPLLQVPPSPPA-SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 888
Query: 267 STRSAVLSGR-VAGLGTELTLTPSSRRAHGS-------------------HPLSSERQAA 306
S+ LSG +AG + T TP R + S HP + R A
Sbjct: 889 SS---TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA 945
Query: 307 PTRAFCSAD--PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPG---P 361
P AF A PLP PP+ P A G L P TP+PG P
Sbjct: 946 PPLAFRGAPGAPLPWPPATGPG----SADG--------LCTIYETEGPESATPAPGALDP 993
Query: 362 GPAP 365
GP+P
Sbjct: 994 GPSP 997
Score = 50.1 bits (118), Expect = 4e-06
Identities = 94/349 (26%), Positives = 118/349 (33%), Gaps = 92/349 (26%)
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQ--GGSSGA-----SPR-----------RLP 147
G+P+ P P P AL L G G + + GG GA +PR R P
Sbjct: 31 GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNP 90
Query: 148 GGRGPAAAFAVEPGTGQR---PRNTSLAQASRSGTVPGLP---PASLQPLRL-------- 193
R PA+ G G+R +NTS S G G P + LR+
Sbjct: 91 ASRPPAS------GRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR 144
Query: 194 ---------PYLAPPGPHDPTSRGPG-------RLLTCEPPSRKLPPPLPPCRSRWVLAP 237
L+ D + PG R LP P P R R
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR----- 199
Query: 238 PPTVRPRLRVLT---------PPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTP 288
PPT PR V + P A RR G + P++RS LS L + P
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRS--LSSSATPLSSPARSGP 257
Query: 289 SSR-----RAHGSHP-------------LSSERQAAPTRAFCSADPLPRP-PSFVPSLPS 329
S+R AH S P + AAP S+ PL P PS + P
Sbjct: 258 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPV 317
Query: 330 PQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPAS 378
P A P L + L P P P P P+LQ TL PA+
Sbjct: 318 PPPDNAATPLPATLPPSPPLATPLPLAP-PSPSAPPSLQ--TLPSPPAT 363
Score = 50.1 bits (118), Expect = 4e-06
Identities = 88/325 (27%), Positives = 118/325 (36%), Gaps = 45/325 (13%)
Query: 70 PTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAG 129
PTR AG+S A P GRG + SPGP + PG+A
Sbjct: 79 PTRS----AGTSSRNPASRPPASGRGERAPP-----AKNTSPGPVS--------SPGRAS 121
Query: 130 CRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASR---SGTVPGLP-P 185
TR G G R+ A A E P+ ++L+ +R SG PG P P
Sbjct: 122 GTTR--PGPLGQKGLRISAEETVARGKATEA-----PKRSALSAGARRDTSGPTPGTPSP 174
Query: 186 ASLQPLR-------LPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPP 238
A + R LP AP P + GP + ++ P P R A
Sbjct: 175 AMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPS--PAARRRPSAGG 232
Query: 239 PTVRPRLRVL----TPPLALRRALPE-RGS-RTPSTRSAVLSGRVAGLGTELTLTPSSRR 292
RP R L TP + R+ P RG+ R P+ S + L P
Sbjct: 233 GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDA 292
Query: 293 AHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAP 352
A PLSS A P+ + A P+P P + LP+ + P L P
Sbjct: 293 APALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPP 352
Query: 353 RGRT-PSPGPGPAPALQPYTLTRFP 376
+T PSP P P+ P ++T P
Sbjct: 353 SLQTLPSP-PATPPSQAPPSMTTPP 376
Score = 47.8 bits (112), Expect = 2e-05
Identities = 90/368 (24%), Positives = 135/368 (36%), Gaps = 48/368 (13%)
Query: 54 RNGAPGTQRGVREVGSPTRDQELRAG-----SSCGRAARGFPEPGRGGKTQKWGGGTGTP 108
R+ A GT+ G+ R + G SS + P P + GGG P
Sbjct: 179 RSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSA-GGGLQRP 237
Query: 109 QSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRL--PGGRGPAAAFAVEPGTGQRP 166
S ++L+S P + R+ G S+ +PR P P A+ P P
Sbjct: 238 AS------RSLSSSATPLSSPARS---GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 167 R-----------NTSLAQASRSGT-VPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLT 214
R ++ LA S SGT +PP LP PP P T
Sbjct: 289 RKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSP 348
Query: 215 CEPPSRKL---PPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSA 271
PPS + PP PP ++ + PP P PP+ + +L + P + A
Sbjct: 349 SAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLA 408
Query: 272 VLS-GRVAGLGTE--------LTLTPSSRRA---HGSHPLSSERQAAPTRAFCSADPLPR 319
+ S LG+ LT++P +A S P S+ + P +A S P
Sbjct: 409 LSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Query: 320 PPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPS---PGPGPAPALQPYTLTRFP 376
+ + SP + + P ++LA +P+ S P +L P +L P
Sbjct: 469 LQTSLSPAVSPLSSPLTI-HPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP 527
Query: 377 ASLSLPDL 384
ASL+ P L
Sbjct: 528 ASLTTPPL 535
Score = 45.8 bits (107), Expect = 7e-05
Identities = 54/175 (30%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 204 PTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALR------RA 257
P +R PG L P S + PPP+ P R + A R PLA R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGR-------KPLAERAGGIGGAT 69
Query: 258 LPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQ---AAPTRAFCSA 314
+PE R TRSA S R + P+S R + P + ++P RA +
Sbjct: 70 IPESAPRAGPTRSAGTSSR-----NPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124
Query: 315 DPLPRPPSFVP-SLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPG-PAPAL 367
P P + S A+G+A P+ R+AL+ GA R T P PG P+PA+
Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPK--RSALSAGARRD-TSGPTPGTPSPAM 176
Score = 41.2 bits (95), Expect = 0.002
Identities = 66/226 (29%), Positives = 81/226 (35%), Gaps = 37/226 (16%)
Query: 166 PRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPG-----RLLTCEP--- 217
PR T + S S P P PL+ P P P TS P LT P
Sbjct: 434 PRQTQASLTSPSR--PASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQA 491
Query: 218 ----PSRKLPPPL-----PPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPST 268
S PL PP ++ LAPP P + TPPL LP T
Sbjct: 492 LSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPL---ENLPSLAPPPLQT 548
Query: 269 RSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPS-- 326
SA L+ L T P +A S PL++ P+ A P P+ P + S
Sbjct: 549 ASAPLT--TPHLETPPCPAPCPLQAPPS-PLTTPPPETPSSI---ATPPPQAPPALASPP 602
Query: 327 ---LPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQP 369
LPSP A P +A L P + P P P +P L P
Sbjct: 603 LQGLPSPPLSPLATPPP---QAPPXLALPPLQAP-PSPPASPPLSP 644
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 54.7 bits (130), Expect = 1e-07
Identities = 72/261 (27%), Positives = 98/261 (37%), Gaps = 38/261 (14%)
Query: 111 PGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTS 170
P P P++ +A R R + S ++PR PG A+ V P G+ + +
Sbjct: 68 PEPPPPESAVPRARTREAEPRRRAR---SKSAPRAPPGLTPAPASPPVLPRRGREAQRAA 124
Query: 171 LAQAS--RSGTVPGLPPAS--LQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPL 226
A+AS R P L + L P++L P GPGR+ + + PP
Sbjct: 125 RAEASPRREPAYPALRALANELHPIKL---------QPQRGGPGRVAPLCAAAGRCAPPE 175
Query: 227 PPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTL 286
PP P P VR RL + L+ A RGSR+ A R A LT+
Sbjct: 176 PPA------GPAPHVRCRLDIKPDDAVLQHAT--RGSRSCGPTEAAHWARPAPQFHGLTV 227
Query: 287 TPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVP--SLPSPQAQGQA----VRQP 340
A P S+ A RAF PLP P + SLP G +P
Sbjct: 228 PGPRHMALSRTPTPSDSYCADPRAFYCDGPLPGPRDYAERRSLPFTTPPGPTQFFYTEEP 287
Query: 341 RLLRAALALGAPRGRTPSPGP 361
+ R + A SPGP
Sbjct: 288 QGFRGSFA--------ASPGP 300
Score = 28.9 bits (63), Expect = 8.6
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 315 DPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGP 363
+ LP PP P P+A+ + R R+ A AP G TP+P P
Sbjct: 65 ETLPEPPP--PESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPP 111
Score = 28.9 bits (63), Expect = 8.6
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 321 PSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPASLS 380
P P+LP+P + + + ALA G+P P P P ++ LT P +
Sbjct: 826 PPGTPALPAPAPRSHGPTVRKFAKVALAAGSP--ARPPPARSREPDMETLILTPPPGTAG 883
Query: 381 L 381
L
Sbjct: 884 L 884
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 2e-07
Identities = 98/387 (25%), Positives = 138/387 (35%), Gaps = 56/387 (14%)
Query: 27 LVSVQLPTLDKQE-----TLVAEEKRGWKQRGRNGAPGTQRGVREVGSPTRDQELRAGSS 81
L + + PTL+K E L+++ +G K + + + +P D+ AG+
Sbjct: 17 LANTEKPTLNKTEQAGRNALLSDISKGKKLK--------KTVTNDRSAPILDKPKGAGAG 68
Query: 82 CGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQ--GGSS 139
G G GG GGG G S G P L L G R+ S
Sbjct: 69 GGGGGFG------GGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSG 122
Query: 140 GASPRRLP-GGRGPAAA-FAVEPGTGQRP-----RNTSLAQASRSGTVPGLPPASLQPLR 192
G+ P LP GGR +A F+ G G+ P + + R+ P P +P
Sbjct: 123 GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS 182
Query: 193 LPYLAPPGPH----DPTSRG----PGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPR 244
+P P P P +RG PG +P PPP P +R ++R
Sbjct: 183 IPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFPG--NRGTALGGGSIRQS 238
Query: 245 LRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPS-SRRAHGSHPLSSER 303
+ P + R LP SR + V PS R A P + +
Sbjct: 239 PLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGN-------RPSIHREAVPPPPPQNNK 291
Query: 304 QAAPTR----AFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSP 359
P+ A A P P PPS P P + PRL + L+L + PSP
Sbjct: 292 PPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 360 GPG----PAPALQPYTLTRFPASLSLP 382
G P P+ +P R P S P
Sbjct: 352 GRSGPLPPPPSERPPPPVRDPPGRSGP 378
Score = 40.0 bits (92), Expect = 0.004
Identities = 63/219 (28%), Positives = 73/219 (33%), Gaps = 64/219 (29%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASP------------------R 144
GG P SPGP P PG G T L GGS SP R
Sbjct: 208 GGPRQP-SPGPTPPPF------PGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 145 RL---------PGGRGPAA---AFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLR 192
L P G P+ A P +P S + S S P PP +P
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP 318
Query: 193 LPYLAPPGPHDPTSRGPGRLLTCE-----------------PPSRKLPPPL--PPCRSRW 233
P +D T R P R L+ PPS + PPP+ PP RS
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Query: 234 VLAPPPTVR----PRLRVLTPPLALRRAL--PERGSRTP 266
+ PPP R R TP L R + P G R P
Sbjct: 379 LPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417
Score = 35.4 bits (80), Expect = 0.092
Identities = 31/100 (31%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 138 SSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLR----- 192
SS P PG GP + P +RP RSG +P PP S
Sbjct: 342 SSSTPPLPSPGRSGP-----LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 193 -LPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRS 231
P L D GP L + PS PPP PP S
Sbjct: 397 ATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
Score = 30.0 bits (66), Expect = 3.9
Identities = 44/137 (32%), Positives = 53/137 (38%), Gaps = 35/137 (25%)
Query: 138 SSGASPRRLPGGR-GPAAAFAVEPGTGQRPR----NTSLAQAS-------RSGTVPGLPP 185
SS A P P R GP G + PR N SL+ ++ RSG +P PP
Sbjct: 303 SSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP--PP 360
Query: 186 ASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCR---SRWVLAPPPTVR 242
S +P PP DP PGR S LPPP P R + L P +
Sbjct: 361 PSERP-------PPPVRDP----PGR-------SGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 243 PRLRVLTPPLALRRALP 259
R V +P R LP
Sbjct: 403 SRSGVDSPRSGPRPPLP 419
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 2e-07
Identities = 98/387 (25%), Positives = 138/387 (35%), Gaps = 56/387 (14%)
Query: 27 LVSVQLPTLDKQE-----TLVAEEKRGWKQRGRNGAPGTQRGVREVGSPTRDQELRAGSS 81
L + + PTL+K E L+++ +G K + + + +P D+ AG+
Sbjct: 17 LANTEKPTLNKTEQAGRNALLSDISKGKKLK--------KTVTNDRSAPILDKPKGAGAG 68
Query: 82 CGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQ--GGSS 139
G G GG GGG G S G P L L G R+ S
Sbjct: 69 GGGGGFG------GGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSG 122
Query: 140 GASPRRLP-GGRGPAAA-FAVEPGTGQRP-----RNTSLAQASRSGTVPGLPPASLQPLR 192
G+ P LP GGR +A F+ G G+ P + + R+ P P +P
Sbjct: 123 GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDS 182
Query: 193 LPYLAPPGPH----DPTSRG----PGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPR 244
+P P P P +RG PG +P PPP P +R ++R
Sbjct: 183 IPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFPG--NRGTALGGGSIRQS 238
Query: 245 LRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPS-SRRAHGSHPLSSER 303
+ P + R LP SR + V PS R A P + +
Sbjct: 239 PLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGN-------RPSIHREAVPPPPPQNNK 291
Query: 304 QAAPTR----AFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSP 359
P+ A A P P PPS P P + PRL + L+L + PSP
Sbjct: 292 PPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 360 GPG----PAPALQPYTLTRFPASLSLP 382
G P P+ +P R P S P
Sbjct: 352 GRSGPLPPPPSERPPPPVRDPPGRSGP 378
Score = 40.0 bits (92), Expect = 0.004
Identities = 63/219 (28%), Positives = 73/219 (33%), Gaps = 64/219 (29%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASP------------------R 144
GG P SPGP P PG G T L GGS SP R
Sbjct: 208 GGPRQP-SPGPTPPPF------PGNRG--TALGGGSIRQSPLSSSSPFSNRPPLPPTPSR 258
Query: 145 RL---------PGGRGPAA---AFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLR 192
L P G P+ A P +P S + S S P PP +P
Sbjct: 259 ALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP 318
Query: 193 LPYLAPPGPHDPTSRGPGRLLTCE-----------------PPSRKLPPPL--PPCRSRW 233
P +D T R P R L+ PPS + PPP+ PP RS
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGP 378
Query: 234 VLAPPPTVR----PRLRVLTPPLALRRAL--PERGSRTP 266
+ PPP R R TP L R + P G R P
Sbjct: 379 LPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417
Score = 35.4 bits (80), Expect = 0.092
Identities = 31/100 (31%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 138 SSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLR----- 192
SS P PG GP + P +RP RSG +P PP S
Sbjct: 342 SSSTPPLPSPGRSGP-----LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALP 396
Query: 193 -LPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRS 231
P L D GP L + PS PPP PP S
Sbjct: 397 ATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTS 436
Score = 30.0 bits (66), Expect = 3.9
Identities = 44/137 (32%), Positives = 53/137 (38%), Gaps = 35/137 (25%)
Query: 138 SSGASPRRLPGGR-GPAAAFAVEPGTGQRPR----NTSLAQAS-------RSGTVPGLPP 185
SS A P P R GP G + PR N SL+ ++ RSG +P PP
Sbjct: 303 SSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP--PP 360
Query: 186 ASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCR---SRWVLAPPPTVR 242
S +P PP DP PGR S LPPP P R + L P +
Sbjct: 361 PSERP-------PPPVRDP----PGR-------SGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 243 PRLRVLTPPLALRRALP 259
R V +P R LP
Sbjct: 403 SRSGVDSPRSGPRPPLP 419
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 54.3 bits (129), Expect = 2e-07
Identities = 87/328 (26%), Positives = 118/328 (35%), Gaps = 71/328 (21%)
Query: 69 SPTRDQELRAGSSCGRAARGFPEPGRGGKT----------QKWGGGTGTPQSPGPCAPQA 118
SP +R+ CGR P+ G G+ ++ G G P++
Sbjct: 219 SPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRT-------- 270
Query: 119 LASLLGPGKAGCRTRLQGG----SSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQA 174
PG A R Q ASP PG PA ++E G +L++A
Sbjct: 271 -----SPGGADGGPRRQNSVRQRPPDASPS--PGSARPAREPSLERVGGHPTSPAALSRA 323
Query: 175 ------SRSGTVPGLPPASLQP---------LRLPYLAPPGPHDPTSRGPGRLLTCEPPS 219
S + P PPA+ P ++ Y+ PG T PGR +
Sbjct: 324 WASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYI--PGAQAATRGLPGRA------A 375
Query: 220 RKLPPPLPPCRSRWVLAPPPTVRPRL---RVLTPPLALRRALPERGSRTPSTRSAVLSGR 276
R+ PPPL R R V PP RPR R + RR P + S L GR
Sbjct: 376 RRKPPPLT--RGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGR 433
Query: 277 VAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQA 336
+ + + P++ R P R APT A +A R S + A G+
Sbjct: 434 ASAVPSGPPKYPTAEREE-PRPPRPRRGPAPTLAAQAAGSCRRWRS---TAEIDAADGRR 489
Query: 337 VRQPRLLRAALALGAPRGRTPSPGPGPA 364
VR PR AP R P PGP P+
Sbjct: 490 VR-PR---------APAARVPGPGPSPS 507
Score = 38.5 bits (88), Expect = 0.011
Identities = 83/300 (27%), Positives = 103/300 (34%), Gaps = 54/300 (18%)
Query: 95 GGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAA 154
GG Q+ G +G + P +S GP G SG+S G P
Sbjct: 105 GGLEQESGRSSGFYEDP--------SSTGGPDSPPSTFCGDSGFSGSSSYGRLGPSEPRG 156
Query: 155 AFAVEPGTGQRPRNTSLAQASRSGT-VPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLL 213
+A E RP+ SL AS S V G A + PY G S GP
Sbjct: 157 IYASE-----RPK--SLGDASPSAPEVVGARAAVPRSFSAPYPTAGG-----SAGPEACS 204
Query: 214 TCEPPSRKLP--PPLP----PCRSRWVLAPPPTVRPRLRVLTPPL-----ALRRALPERG 262
+ E +R P P P RS PPT P PL AL R RG
Sbjct: 205 SAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRG 264
Query: 263 SRTPSTRSAVLSG------RVAGLGTELTLTPSSRRAH--------GSHPLSSERQAAPT 308
+ P T G V + + +P S R G HP S AA +
Sbjct: 265 AGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSP---AALS 321
Query: 309 RAFCS-----ADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGP 363
RA+ S A P P P PS P A+G+ V+ + A A GR P P
Sbjct: 322 RAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKPPP 381
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 53.9 bits (128), Expect = 2e-07
Identities = 107/384 (27%), Positives = 133/384 (34%), Gaps = 120/384 (31%)
Query: 75 ELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPC-APQALASL-----LGPGK- 127
EL + GRAAR PE G T P SP P LAS+ +GPG
Sbjct: 1009 ELSSIGGGGRAARRPPE----------GHPTPRPASPEPGRVATVLASVKHKEAIGPGGE 1058
Query: 128 -AGCRTRLQGGSSG--ASPRRLPGGRGPAAAFAVEPGTG-QRPRNTSLAQASRSGTVPGL 183
R L G +G A+ RR PG F VE GTG QRPR S +A G
Sbjct: 1059 VVNRRRTLSGPVTGLLATARRGPGESADPGPF-VEDGTGRQRPRGPSKGEAGVEGPPLAK 1117
Query: 184 PPASL----------------------------QPLRLPYLAPPGPHDPTS---RGPGRL 212
AS +P A P P P S G G +
Sbjct: 1118 VEASATLKRRIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTV 1177
Query: 213 LTCEPPSRK-----LPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLA-------------- 253
P S + LPPP PP PPPT L L PP
Sbjct: 1178 RR-RPASEQAGPPELPPPPPPAE------PPPTDLAHLPPLPPPEGEARKPAKPPVSPKP 1230
Query: 254 -LRRALPE-RGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRA- 310
L + +P+ +GS TP+++ L G + P +RAHG+ P S + P A
Sbjct: 1231 VLTQPVPKLQGSPTPTSKKVPLPGPGS---------PEVKRAHGTPPPVSPKPPPPPTAP 1281
Query: 311 ----------FCSADPLP-------------RPPSFVPSLPSPQAQGQAVRQPRL----- 342
SA P P +PP PSL + A+ + P L
Sbjct: 1282 KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAK 1341
Query: 343 -LRAALALGAPRGRTPSPGPGPAP 365
RAA A A P+P G +P
Sbjct: 1342 PPRAAAAAAAAAAAPPAPPEGASP 1365
Score = 52.0 bits (123), Expect = 9e-07
Identities = 61/229 (26%), Positives = 77/229 (33%), Gaps = 58/229 (25%)
Query: 145 RLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDP 204
R G P GTG R + QA P PPA P L +L P P +
Sbjct: 1157 REAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEG 1216
Query: 205 TSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSR 264
+R P + PP + +P L P L +GS
Sbjct: 1217 EARKPAK-------------------------PPVSPKPVLTQPVPKL--------QGSP 1243
Query: 265 TPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFV 324
TP+++ L G +P +RAHG+ P S + P A P+P V
Sbjct: 1244 TPTSKKVPLPG---------PGSPEVKRAHGTPPPVSPKPPPPPTA-------PKPVKAV 1287
Query: 325 PSLPS----PQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQP 369
LPS P RQP AL P G PS G PA P
Sbjct: 1288 AGLPSGSAGPSPAPSPARQP-----PAALAKPPGTPPSLGASPAKPPSP 1331
Score = 44.7 bits (104), Expect = 2e-04
Identities = 40/123 (32%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Query: 90 PEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGG 149
P PG G K GT P SP P P P L GS+G SP P
Sbjct: 1251 PLPGPGSPEVKRAHGTPPPVSPKPPPPPT-----APKPVKAVAGLPSGSAGPSPAPSP-A 1304
Query: 150 RGPAAAFAVEPGT----GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPT 205
R P AA A PGT G P + + + VP PP + APP P +
Sbjct: 1305 RQPPAALAKPPGTPPSLGASPAKPP-SPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGA 1363
Query: 206 SRG 208
S G
Sbjct: 1364 SPG 1366
Score = 40.8 bits (94), Expect = 0.002
Identities = 98/372 (26%), Positives = 124/372 (33%), Gaps = 94/372 (25%)
Query: 68 GSPTRDQEL-RAGSSCGRAARGFPEPGRGGKTQKWGGGTGTP-QSPG---PCAPQALASL 122
G+P R+ R G S RA+ P PG+ + G TP Q+P P +PQAL
Sbjct: 736 GTPPREARPGRHGHSIKRASVP-PVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGP 794
Query: 123 LGPGKAGCRTR-----LQGGSSGASPRRLP-----------------GGRGPAAAFAVEP 160
GP A + + L SPR LP G GPAA P
Sbjct: 795 HGPAPATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAA-----P 849
Query: 161 GTGQRPRNTS---LAQASRSGTVPGLPP-----------ASLQPLRLPYLAPP--GPHDP 204
G P T+ L + PG P + +P R L P GP+
Sbjct: 850 GPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYAT 909
Query: 205 TSRGPGRLLTCEPPS-----------------RKLPPPLPPCRSRWVLA-------PPPT 240
R GR + P+ +K PPP PP RS LA P P
Sbjct: 910 VQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPD 969
Query: 241 VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTP------SSRRAH 294
P +L RRA GS T SA G V + L L+ ++RR
Sbjct: 970 AEPEDGLLGVRAQCRRASDLAGS--VDTGSA---GSVKSIAAMLELSSIGGGGRAARRPP 1024
Query: 295 GSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLR---AALALGA 351
HP P R + + P G+ V + R L L A
Sbjct: 1025 EGHPTPRPASPEPGRVATVLASVKHKEAIGPG-------GEVVNRRRTLSGPVTGLLATA 1077
Query: 352 PRGRTPSPGPGP 363
RG S PGP
Sbjct: 1078 RRGPGESADPGP 1089
Score = 35.8 bits (81), Expect = 0.070
Identities = 50/203 (24%), Positives = 69/203 (33%), Gaps = 39/203 (19%)
Query: 198 PPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVL--APPPTVRPRLRVLTPPLALR 255
PPGP P SR LL P P P R + A P V + R + PP
Sbjct: 714 PPGPSSPMSRSQEYLLDEGPAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSH 773
Query: 256 RALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSAD 315
P+ ++T L G HG P ++ + PT
Sbjct: 774 FTPPQTPTKTRPGSPQALGG-----------------PHGPAPATA--KVKPTPQLLPPT 814
Query: 316 PLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPAL-------- 367
P P +P SP +G A P+ + + AP G P P P P L
Sbjct: 815 ERPMSPRSLPQ--SPTHRGFAYVLPQPVEGEVGPAAP-GPAPPPVPTAVPTLCLPPEADA 871
Query: 368 -------QPYTLTRFPASLSLPD 383
+ ++L R+ AS S P+
Sbjct: 872 EPGRPKKRAHSLNRYAASDSEPE 894
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 53.1 bits (126), Expect = 4e-07
Identities = 94/342 (27%), Positives = 112/342 (32%), Gaps = 94/342 (27%)
Query: 109 QSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRN 168
Q P P P A + LGP Q S ASP P + PAAA PG P
Sbjct: 731 QDPAPATPVAKGAGLGP---------QAPDSQASPA--PAPQIPAAAPLKGPGPSSSP-- 777
Query: 169 TSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLT-----CEPPSRKLP 223
SL + G P LP P P P SR P R + EPP P
Sbjct: 778 -SLPHQAPLGDSPHLPS-------------PHPTRPPSRPPSRPQSVSRPPSEPPLHPCP 823
Query: 224 PPLPPCRSRWVL-------APPPTVRPRLRVLTPPLALRR--ALPERGSRTP-------S 267
PP P + PPP P PP R + P G P S
Sbjct: 824 PPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSS 883
Query: 268 TRSAVLSGR------VAGLGTELTLT-PSSRRAHGSHPLSSERQAAPTRAFCSADPLPRP 320
T SAV S A ++ L P S+ H S P A A P P P
Sbjct: 884 TSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPA---APPPPPP 940
Query: 321 PSF------VPSLPSPQA--------------QGQAVRQPRLLRAALALG---------- 350
+F P+LP P+A Q +A P + + +LG
Sbjct: 941 RTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVL 1000
Query: 351 ----APRGRTPSPGPGPAPALQPYTLTRFPASLSLPDLVFTS 388
AP G +P PAPA P T P L + F S
Sbjct: 1001 VSGQAPSGTPTAPSHAPAPA--PMAATGLPPLLPAENKAFAS 1040
Score = 42.4 bits (98), Expect = 8e-04
Identities = 86/346 (24%), Positives = 128/346 (36%), Gaps = 43/346 (12%)
Query: 69 SPTRDQELRAGSSCGRAARGFPEP-GRGGKTQKWGGGTGT-PQSPGPCAPQALASLLGPG 126
+PT Q AG + + P+P G T G G PQ P APQ L + + G
Sbjct: 347 TPTPIQPKPAGVLPPKLYQLTPKPFAPAGATLTIQGEPGALPQQPK--APQNL-TFMAAG 403
Query: 127 KAGCRTRLQG----------------GSSGASPRRLPGGRG-PAAAFAVEPGTGQRPRNT 169
KAG L G ++GA+P + PG P + + G+
Sbjct: 404 KAGQNVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLLNQGSSIVIPAQ 463
Query: 170 SLAQASRSGTVPGLPPASL--QPLRLP------YLAPPGPHDPTSRGPGRLLTCEPPSRK 221
+ +PG P L Q LP LA PH +LT + +
Sbjct: 464 HMLPGQNQFLLPGAPAVQLPQQLSALPANVGGQILAAAAPHTGGQLIANPILTNQNLAGP 523
Query: 222 LP--PPLPP---CRSRWVLAPPPTVRPRLRVLTPPLALRR-ALPERGSRTPSTRSA--VL 273
L P L P S +L+ P + + P++L +LP + P+ +A VL
Sbjct: 524 LSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATTVL 583
Query: 274 SGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPR-PPSFVPSLPSPQA 332
G L + P ++ +AAP + P P+ PP+ LP
Sbjct: 584 QGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPV---LTVQPAPQAPPAVSTPLPLGLQ 640
Query: 333 QGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFPAS 378
Q QA +QP A P+ TP P PG A + + L + P++
Sbjct: 641 QPQA-QQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSA 685
Score = 41.2 bits (95), Expect = 0.002
Identities = 61/209 (29%), Positives = 81/209 (38%), Gaps = 33/209 (15%)
Query: 166 PRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPP 225
P +TS A AS S T LP + +L + GPH + P L EP + PP
Sbjct: 881 PSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAP---PP 937
Query: 226 LPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELT 285
PP + V P P L +AL ER + PS +L + G
Sbjct: 938 PPPRTFQMVTTP-----------FPALPQPKALLERFHQVPS--GIILQNKAGG----AP 980
Query: 286 LTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRA 345
P + + G PL+S A+ + + P PS P+ P+P A A P LL A
Sbjct: 981 AAPQTSTSLG--PLTSP-AASVLVSGQAPSGTPTAPSHAPA-PAPMA---ATGLPPLLPA 1033
Query: 346 ---ALALGAPR---GRTPSPGPGPAPALQ 368
A A P + S GPG LQ
Sbjct: 1034 ENKAFASNLPTLNVAKAASSGPGKPSGLQ 1062
Score = 34.7 bits (78), Expect = 0.16
Identities = 45/183 (24%), Positives = 60/183 (32%), Gaps = 27/183 (14%)
Query: 102 GGGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPG 161
GG G+P A +L+S A + L G P R R P +
Sbjct: 1251 GGAGGSPSVTWARASSSLSSSSSSSSAA--SSLDADEDGPMPSR---NRPPIKTYEARSR 1305
Query: 162 TGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRK 221
G + L +G + +L P+ P PP P L EPP R
Sbjct: 1306 IGLK-----LKIKQEAGLSKVVHNTALDPVHQP--PPP---------PATLKVAEPPPRP 1349
Query: 222 LPPPLPPCRSRWVLAPPPTVRPRLRVL-----TPPLALRRALPERGSRTPSTRSAVLSGR 276
PPP P + + PP P + L P L LR+ E P +GR
Sbjct: 1350 PPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYRENVG-GPGAPEGTPAGR 1408
Query: 277 VAG 279
G
Sbjct: 1409 ARG 1411
Score = 30.0 bits (66), Expect = 3.9
Identities = 75/308 (24%), Positives = 101/308 (32%), Gaps = 56/308 (18%)
Query: 112 GPCAPQALASL-LGPGKAGC----------RTRLQGGS--SGASPRRLPGGRGPAAAFAV 158
GP P LAS + P AG T L G S GA P G AV
Sbjct: 268 GPSEPVTLASAGVSPQGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQPLAV 327
Query: 159 EPGTGQRPRNTSLAQASRSGTVPGLP-PASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEP 217
PG G P + P P PA + P +L Y P P P G LT +
Sbjct: 328 APGLGSSPLVPAPNVILHRTPTPIQPKPAGVLPPKL-YQLTPKPFAPA----GATLTIQG 382
Query: 218 PSRKLP-PPLPPCRSRWVLA------------PPPTVRPRLRVLTPPLALRRALPERGSR 264
LP P P ++ A P P ++ + PP A P +
Sbjct: 383 EPGALPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANV-FKQPPATTTGAAP---PQ 438
Query: 265 TPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFV 324
P S +S + G+ + + H L + Q A A LP+ S +
Sbjct: 439 PPGALSKPMSVHLLNQGSSIVIP-------AQHMLPGQNQFLLPGA--PAVQLPQQLSAL 489
Query: 325 P--------SLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLTRFP 376
P + +P GQ + P L LA G +P G A + L+ P
Sbjct: 490 PANVGGQILAAAAPHTGGQLIANPILTNQNLAGPLSLGPVLAPHSG---AHSAHILSAAP 546
Query: 377 ASLSLPDL 384
+ P L
Sbjct: 547 IQVGQPAL 554
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 52.8 bits (125), Expect = 6e-07
Identities = 58/198 (29%), Positives = 74/198 (37%), Gaps = 45/198 (22%)
Query: 184 PPASLQPLRLPYLA--PPGPHDPTSRGPGRLLTCEPPSRKLP-PPLPPCRSRWVLAPPPT 240
PP++LQP++LP LA PP P P P P ++ P PP PP PPP
Sbjct: 204 PPSALQPVQLPRLALSPPPPAPPLPPPP-------PLAQVAPSPPSPP--------PPPR 248
Query: 241 VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRV---AGLGTELTLTPSSRRAHGSH 297
P L P L RA E + + G L L L P +
Sbjct: 249 PPPTLSASDPSLDFLRAQQETANAIRELAGTLRQGLAKLSEALSALLPLLPGT------- 301
Query: 298 PLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALG------- 350
P+ S P P P PP P LP P + + +P + AA+ G
Sbjct: 302 PVDSLPPPLP-------PPPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGAVVAARG 354
Query: 351 ---APRGRTPSPGPGPAP 365
APR +P P PAP
Sbjct: 355 VIIAPRSEEGAPRPPPAP 372
Score = 33.5 bits (75), Expect = 0.35
Identities = 43/164 (26%), Positives = 54/164 (32%), Gaps = 35/164 (21%)
Query: 208 GPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPS 267
GPG + PP P + PPP+ P+ VL+ R R
Sbjct: 121 GPGVAAPGAGAGAEEPPAAPSSQP-----PPPSACPQRYVLSED--------RREDRRAD 167
Query: 268 TRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPR----PPSF 323
T + +G + E PS G P ER++ P A LPR PP
Sbjct: 168 TSAHSKAGSSS---PEPWARPSCTPQEGGCPRPKERESPPPSALQPVQ-LPRLALSPPPP 223
Query: 324 VPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPAL 367
P LP P Q AP +P P P P P L
Sbjct: 224 APPLPPPPPLAQV--------------APSPPSPPPPPRPPPTL 253
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 52.8 bits (125), Expect = 6e-07
Identities = 67/273 (24%), Positives = 95/273 (34%), Gaps = 18/273 (6%)
Query: 104 GTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTG 163
GTG P PQ + L + R + + P P+ +P G
Sbjct: 253 GTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG 312
Query: 164 QRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLP 223
+ P + S+ G P PPA L P PG P + PG T +PP++ L
Sbjct: 313 KPPAQQPGHEKSQPG--PAKPPAQPSGLTKPLAQQPGTVKPPVQPPG---TTKPPAQPLG 367
Query: 224 PPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVA---GL 280
P PP + P + PP + + G P T+ +A GL
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 281 GTEL-----TLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVP--SLPSPQAQ 333
+ T TP + G P +QA P + +PPS +P + P PQ
Sbjct: 428 QSPAKAPGPTKTPVQQPGPGKIPA---QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP 484
Query: 334 GQAVRQPRLLRAALALGAPRGRTPSPGPGPAPA 366
G A P+ +A G T P P PA
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA 517
Score = 50.4 bits (119), Expect = 3e-06
Identities = 66/278 (23%), Positives = 96/278 (34%), Gaps = 51/278 (18%)
Query: 58 PGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQ 117
PGT + + P + + GS + +PG Q G G Q PGP P
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSE----QPGPKALAQPPGVGKTPAQQPGPAKPP 411
Query: 118 ALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRP-RNTSLAQASR 176
+ G L SP + PG P +PG G+ P + + S
Sbjct: 412 TQ-------QVGTPKPLAQQPGLQSPAKAPG---PTKTPVQQPGPGKIPAQQAGPGKTSA 461
Query: 177 SGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLA 236
T P PP+ L P PGP P + PG + +PPS++ PP +
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG---SAKPPSQQPGSTKPPPQQPGPAK 518
Query: 237 PPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGS 296
P P P + + + GS PS + PS +
Sbjct: 519 PSP---------QQPGSTKPPSQQPGSAKPSAQQ-----------------PSPAKP--- 549
Query: 297 HPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 334
S+++ P S PL +PP+ PS P +QG
Sbjct: 550 ---SAQQSTKPVSQTGSGKPL-QPPTVSPSAKQPPSQG 583
Score = 41.2 bits (95), Expect = 0.002
Identities = 54/205 (26%), Positives = 76/205 (37%), Gaps = 32/205 (15%)
Query: 165 RPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPP 224
RP+ P LP S P++ P P P ++ PG + P++ PP
Sbjct: 280 RPQTKQADIVRGESVKPSLPSPSKPPIQ-----QPTPGKPPAQQPGHEKSQPGPAK--PP 332
Query: 225 PLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTEL 284
P ++ + P TV+P ++ PP + G P + G+E
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQ---PPGTTKPPAQPLGPAKPPAQQT---------GSE- 379
Query: 285 TLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLP-RPPSFVPSLPSPQAQGQAVRQPRLL 343
PSS + G L+ T A P P +PP+ P P AQ QP L
Sbjct: 380 --KPSSEQP-GPKALAQPPGVGKTPA---QQPGPAKPPTQQVGTPKPLAQ-----QPGLQ 428
Query: 344 RAALALGAPRGRTPSPGPGPAPALQ 368
A A G + PGPG PA Q
Sbjct: 429 SPAKAPGPTKTPVQQPGPGKIPAQQ 453
Score = 38.1 bits (87), Expect = 0.014
Identities = 75/328 (22%), Positives = 113/328 (34%), Gaps = 47/328 (14%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGT 162
G + P P P P G A + A P P G A +PGT
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGL--TKPLAQQPGT 348
Query: 163 GQ---RPRNTSLAQASRSGTVPGLPPA---------SLQPLRLPYLAPPGPHDPTSRGPG 210
+ +P T+ A G P PPA S QP PPG ++ PG
Sbjct: 349 VKPPVQPPGTTKPPAQPLG--PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPG 406
Query: 211 RLLTCEPPSRKLPPPLP----PCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRT- 265
+PP++++ P P P AP PT P + + ++A P + S
Sbjct: 407 ---PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 266 --PSTRSAVLSG------RVAGLGTELTLTPSSRRAHGSHPLSSE---RQAAPTRAFCSA 314
P+ + L G + G P S + P S++ +Q P +
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 315 DPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLT- 373
+PPS P P AQ + +P A + P G LQP T++
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQPSPAKP---------SAQQSTKPVSQTGSGKPLQPPTVSP 574
Query: 374 --RFPASLSLPDLVFTSVGSSLVICLVP 399
+ P S LP + ++ ++ VP
Sbjct: 575 SAKQPPSQGLPKTICPLCNTTELLLHVP 602
Score = 33.5 bits (75), Expect = 0.35
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 185 PASLQPLRLPYLAP-PGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRP 243
PAS P P ++ P P R ++ +PP PPP PP PPP P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP------PPPPPPPPP 2425
Query: 244 RLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
L T P + +P T + L V L T L R++G
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVL-----RSNG-------- 2472
Query: 304 QAAPTRAFCSADPLPRP--PSFVPS 326
P C+ P P P PS +PS
Sbjct: 2473 --LPVTRICTTAPPPVPPKPSSIPS 2495
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 52.8 bits (125), Expect = 6e-07
Identities = 67/273 (24%), Positives = 95/273 (34%), Gaps = 18/273 (6%)
Query: 104 GTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTG 163
GTG P PQ + L + R + + P P+ +P G
Sbjct: 253 GTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG 312
Query: 164 QRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLP 223
+ P + S+ G P PPA L P PG P + PG T +PP++ L
Sbjct: 313 KPPAQQPGHEKSQPG--PAKPPAQPSGLTKPLAQQPGTVKPPVQPPG---TTKPPAQPLG 367
Query: 224 PPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVA---GL 280
P PP + P + PP + + G P T+ +A GL
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGL 427
Query: 281 GTEL-----TLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVP--SLPSPQAQ 333
+ T TP + G P +QA P + +PPS +P + P PQ
Sbjct: 428 QSPAKAPGPTKTPVQQPGPGKIPA---QQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP 484
Query: 334 GQAVRQPRLLRAALALGAPRGRTPSPGPGPAPA 366
G A P+ +A G T P P PA
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA 517
Score = 50.4 bits (119), Expect = 3e-06
Identities = 66/278 (23%), Positives = 96/278 (34%), Gaps = 51/278 (18%)
Query: 58 PGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQ 117
PGT + + P + + GS + +PG Q G G Q PGP P
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSE----QPGPKALAQPPGVGKTPAQQPGPAKPP 411
Query: 118 ALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRP-RNTSLAQASR 176
+ G L SP + PG P +PG G+ P + + S
Sbjct: 412 TQ-------QVGTPKPLAQQPGLQSPAKAPG---PTKTPVQQPGPGKIPAQQAGPGKTSA 461
Query: 177 SGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLA 236
T P PP+ L P PGP P + PG + +PPS++ PP +
Sbjct: 462 QQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPG---SAKPPSQQPGSTKPPPQQPGPAK 518
Query: 237 PPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGS 296
P P P + + + GS PS + PS +
Sbjct: 519 PSP---------QQPGSTKPPSQQPGSAKPSAQQ-----------------PSPAKP--- 549
Query: 297 HPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 334
S+++ P S PL +PP+ PS P +QG
Sbjct: 550 ---SAQQSTKPVSQTGSGKPL-QPPTVSPSAKQPPSQG 583
Score = 41.2 bits (95), Expect = 0.002
Identities = 54/205 (26%), Positives = 76/205 (37%), Gaps = 32/205 (15%)
Query: 165 RPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPP 224
RP+ P LP S P++ P P P ++ PG + P++ PP
Sbjct: 280 RPQTKQADIVRGESVKPSLPSPSKPPIQ-----QPTPGKPPAQQPGHEKSQPGPAK--PP 332
Query: 225 PLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTEL 284
P ++ + P TV+P ++ PP + G P + G+E
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQ---PPGTTKPPAQPLGPAKPPAQQT---------GSE- 379
Query: 285 TLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLP-RPPSFVPSLPSPQAQGQAVRQPRLL 343
PSS + G L+ T A P P +PP+ P P AQ QP L
Sbjct: 380 --KPSSEQP-GPKALAQPPGVGKTPA---QQPGPAKPPTQQVGTPKPLAQ-----QPGLQ 428
Query: 344 RAALALGAPRGRTPSPGPGPAPALQ 368
A A G + PGPG PA Q
Sbjct: 429 SPAKAPGPTKTPVQQPGPGKIPAQQ 453
Score = 38.1 bits (87), Expect = 0.014
Identities = 75/328 (22%), Positives = 113/328 (34%), Gaps = 47/328 (14%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGT 162
G + P P P P G A + A P P G A +PGT
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGL--TKPLAQQPGT 348
Query: 163 GQ---RPRNTSLAQASRSGTVPGLPPA---------SLQPLRLPYLAPPGPHDPTSRGPG 210
+ +P T+ A G P PPA S QP PPG ++ PG
Sbjct: 349 VKPPVQPPGTTKPPAQPLG--PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPG 406
Query: 211 RLLTCEPPSRKLPPPLP----PCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRT- 265
+PP++++ P P P AP PT P + + ++A P + S
Sbjct: 407 ---PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 266 --PSTRSAVLSG------RVAGLGTELTLTPSSRRAHGSHPLSSE---RQAAPTRAFCSA 314
P+ + L G + G P S + P S++ +Q P +
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 315 DPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQPYTLT- 373
+PPS P P AQ + +P A + P G LQP T++
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQPSPAKP---------SAQQSTKPVSQTGSGKPLQPPTVSP 574
Query: 374 --RFPASLSLPDLVFTSVGSSLVICLVP 399
+ P S LP + ++ ++ VP
Sbjct: 575 SAKQPPSQGLPKTICPLCNTTELLLHVP 602
Score = 33.5 bits (75), Expect = 0.35
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 24/145 (16%)
Query: 185 PASLQPLRLPYLAP-PGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPTVRP 243
PAS P P ++ P P R ++ +PP PPP PP PPP P
Sbjct: 2372 PASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP------PPPPPPPPP 2425
Query: 244 RLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHPLSSER 303
L T P + +P T + L V L T L R++G
Sbjct: 2426 PLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVL-----RSNG-------- 2472
Query: 304 QAAPTRAFCSADPLPRP--PSFVPS 326
P C+ P P P PS +PS
Sbjct: 2473 --LPVTRICTTAPPPVPPKPSSIPS 2495
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 52.4 bits (124), Expect = 7e-07
Identities = 69/286 (24%), Positives = 95/286 (33%), Gaps = 71/286 (24%)
Query: 183 LPPASLQPLRLPY--LAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLPPCRSRWVLAPPPT 240
+P A + +LP L PP P P P + PP PPP PP + +PPP
Sbjct: 391 MPAAEKEEAKLPPPPLTPPAPSPPPPLPPP---STSPPPPLCPPPPPPVSPPPLPSPPPP 447
Query: 241 VRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTL--TPSSRRAHGSHP 298
+ +PP + + R P T S A G E T TP+ A G P
Sbjct: 448 PAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPP 507
Query: 299 LSSERQAAPTRAF----------------------------------------------- 311
S A + F
Sbjct: 508 EDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPI 567
Query: 312 CSADPLPRPPSFVPS-----------LPSPQAQGQAVRQPRLLRAALALG-APRGRTPSP 359
++ P+P+ P+ VPS +P P+ + +R+P +L P P P
Sbjct: 568 TTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPP 627
Query: 360 GPGPAPALQPYTLTRFPASLSLPDLVFTSVGSSLVI---CLVPTPL 402
P P+P P T +R P L P FT + L I L P PL
Sbjct: 628 PPAPSPPPAPATSSRRPLLLRAPQ--FTPSEAHLKIYESVLTPPPL 671
Score = 34.7 bits (78), Expect = 0.16
Identities = 56/213 (26%), Positives = 71/213 (33%), Gaps = 42/213 (19%)
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDP-------TSRGPGRLLTC 215
G R L A + T+ P S +P PG DP P R
Sbjct: 1787 GPREEPAHLEAAEENQTIVHSPAPSSEP--------PGGEDPPLDTDVLVPGAPER---- 1834
Query: 216 EPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTR--SAVL 273
P + L PPL P APPP P + A + + +PS R V
Sbjct: 1835 HSPIQNLDPPLRPDSGS---APPPA----------PRSFSGARIKVPNYSPSRRPLGGVS 1881
Query: 274 SGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPL-PRPPSFVPSLPSPQA 332
G + G+ +LT H + AP R PL PRPP + P P
Sbjct: 1882 FGPLPSPGSPSSLT------HHIPTVGDPDFPAPPRRSRRPSPLAPRPPPSRWASP-PLK 1934
Query: 333 QGQAVRQPRLLRAALALGAPRGRTPSPGPGPAP 365
+R P AL G PGP P+P
Sbjct: 1935 TSPQLRVPPPTSVVTALTPTSGELAPPGPAPSP 1967
Score = 30.8 bits (68), Expect = 2.3
Identities = 63/233 (27%), Positives = 81/233 (34%), Gaps = 58/233 (24%)
Query: 181 PGLPPASLQPLRLPYL--APPGPHDPTS-RGPGRLLTCEPPSRKLPPPLPPCRS------ 231
P P + P+ P + +PP P +P P R T PPS P PLP R
Sbjct: 552 PKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPT--PPST--PVPLPEKRRSILREP 607
Query: 232 --RWV-----LAPPPTVRPRLRVLTPPLALRRALPERGSRTPST-RSAVLSGRVAGLGT- 282
RW L PPP P +PP A P SR P R+ + A L
Sbjct: 608 TFRWTSLTRELPPPPPAPPPPPAPSPPPA-----PATSSRRPLLLRAPQFTPSEAHLKIY 662
Query: 283 ELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRP---------PSFVPSLPSP--- 330
E LTP A P + E + P A+P PR P F P + +P
Sbjct: 663 ESVLTPPPLGA----PEAPEPEPPPADD-SPAEPEPRAVGRTNHLSLPRFAPVVTTPVKA 717
Query: 331 --------------QAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPALQP 369
Q Q Q ++ + L+ L A P P P+P P
Sbjct: 718 EVSPHGAPALSNGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQMP 770
Score = 29.6 bits (65), Expect = 5.0
Identities = 79/328 (24%), Positives = 100/328 (30%), Gaps = 67/328 (20%)
Query: 50 KQRGRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQ 109
++RGR +QR RE AAR PE G T TG P
Sbjct: 467 RKRGRPPLTPSQRAERE------------------AARAGPE-GTSPPTPTPSTATGGPP 507
Query: 110 SPGPCAPQALASLLGPGKAGCRTRLQGGSSGA--SPRRLPGGRGPAAAFAVEPGTGQRPR 167
P + L + + SS +PRR P + P
Sbjct: 508 EDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPI 567
Query: 168 NTSLAQASRSGTVPGLPPASLQP---LRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPP 224
TS VP P A P + LP +PT R PP PP
Sbjct: 568 TTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPP 627
Query: 225 PLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSR-TPSTRSAVLSGRVAGLGTE 283
P P +PPP P + RR L R + TPS + E
Sbjct: 628 PPAP-------SPPP---------APATSSRRPLLLRAPQFTPSEAHLKI--------YE 663
Query: 284 LTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLL 343
LTP P A + +P P P P+ P P+A G+ L
Sbjct: 664 SVLTP-----------------PPLGAPEAPEPEPPPADDSPAEPEPRAVGR-TNHLSLP 705
Query: 344 RAALALGAPRGRTPSPGPGPAPALQPYT 371
R A + P SP PA + P T
Sbjct: 706 RFAPVVTTPVKAEVSPHGAPALSNGPQT 733
>gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens]
Length = 1111
Score = 52.4 bits (124), Expect = 7e-07
Identities = 78/280 (27%), Positives = 97/280 (34%), Gaps = 45/280 (16%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGT 162
GG +P GP P + L C GA+P+ PGG GP EP
Sbjct: 70 GGGPSPGRHGPLPPPGYGTPLN-----CNNN---NGMGAAPKPFPGGTGP--PIKAEPKA 119
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKL 222
P GT+P PP S P PH + P L PSR
Sbjct: 120 PYAP-----------GTLPDSPPDSGSEAYSPQQVNE-PHLLRTITPETLCHVGVPSRLE 167
Query: 223 PPPLPPCRSRWVLAPPPTVRPRLRVL--------TPPLALRRALPERGSRTP---STRSA 271
PP PP PPP P VL PP+ A+ + T + +S
Sbjct: 168 HPPPPPAHLPGP-PPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQ 226
Query: 272 VLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADP-----LPRPPSFVPS 326
+L + G EL PS +R H P S A +P LP P+ PS
Sbjct: 227 MLHQLLQQHGAELPTHPSKKRKHSESP-PSTLNAQMLNGMIKQEPGTVTALPLHPTRAPS 285
Query: 327 LPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPA 366
P P QG P +L L R +TP P AP+
Sbjct: 286 PPWP-PQGPLSPGP----GSLPLSIARVQTPPWHPPGAPS 320
>gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens]
Length = 1151
Score = 52.4 bits (124), Expect = 7e-07
Identities = 78/280 (27%), Positives = 97/280 (34%), Gaps = 45/280 (16%)
Query: 103 GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGT 162
GG +P GP P + L C GA+P+ PGG GP EP
Sbjct: 79 GGGPSPGRHGPLPPPGYGTPLN-----CNNN---NGMGAAPKPFPGGTGP--PIKAEPKA 128
Query: 163 GQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKL 222
P GT+P PP S P PH + P L PSR
Sbjct: 129 PYAP-----------GTLPDSPPDSGSEAYSPQQVNE-PHLLRTITPETLCHVGVPSRLE 176
Query: 223 PPPLPPCRSRWVLAPPPTVRPRLRVL--------TPPLALRRALPERGSRTP---STRSA 271
PP PP PPP P VL PP+ A+ + T + +S
Sbjct: 177 HPPPPPAHLPGP-PPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQ 235
Query: 272 VLSGRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADP-----LPRPPSFVPS 326
+L + G EL PS +R H P S A +P LP P+ PS
Sbjct: 236 MLHQLLQQHGAELPTHPSKKRKHSESP-PSTLNAQMLNGMIKQEPGTVTALPLHPTRAPS 294
Query: 327 LPSPQAQGQAVRQPRLLRAALALGAPRGRTPSPGPGPAPA 366
P P QG P +L L R +TP P AP+
Sbjct: 295 PPWP-PQGPLSPGP----GSLPLSIARVQTPPWHPPGAPS 329
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 52.0 bits (123), Expect = 9e-07
Identities = 88/333 (26%), Positives = 104/333 (31%), Gaps = 47/333 (14%)
Query: 53 GRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFP-EPGRGGKTQKWG-----GGTG 106
G GAPG G P RD G G RG P PG G K G G +G
Sbjct: 507 GERGAPGPAGPRGAAGEPGRD-----GVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESG 561
Query: 107 TPQSPGPCAPQALASLLG----------PGKAGCRTRLQGGSSGASPRRLPGGRGPAAAF 156
P PGP P+ ++G PGK G R GG G P+ PG G
Sbjct: 562 RPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGER----GGPGGPGPQGPPGKNGETGPQ 617
Query: 157 AVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGPHDPTSR--GPGRLLT 214
TG G + GLP P PGP PG
Sbjct: 618 GPPGPTGPGGDKGDTGPPGPQG-LQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGD 676
Query: 215 CEPPSRKLPPPLPPCRSRWVLAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLS 274
P + PP L A PP PP P + TP + +
Sbjct: 677 AGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPP------GPPGAAGTPGLQG--MP 728
Query: 275 GRVAGLGTELTLTPSSRRAHGSHPLSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQG 334
G GLG +P + G P P + P P P + +G
Sbjct: 729 GERGGLG-----SPGPKGDKG-EPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEG 782
Query: 335 QAVRQPRLLRAALALGAP--RGRTPSPGPGPAP 365
A P L A G+P RG T PGP P
Sbjct: 783 GA---PGLPGIAGPRGSPGERGETGPPGPAGFP 812
Score = 43.9 bits (102), Expect = 3e-04
Identities = 54/167 (32%), Positives = 60/167 (35%), Gaps = 19/167 (11%)
Query: 53 GRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFP-EPGRGGKTQKWG--GGTGTPQ 109
G NGAPG + G E G E G R G P PG G+ K G G G
Sbjct: 420 GANGAPGLRGGAGEPGKNGAKGE--PGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANG 477
Query: 110 SPGPCAPQALASLLGP-GKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRN 168
PG + GP G G + G A R PG GP A A EPG P
Sbjct: 478 LPGAAGERGAPGFRGPAGPNG----IPGEKGPAGERGAPGPAGPRGA-AGEPGRDGVPGG 532
Query: 169 TSLAQASRSGTVPGL-----PPASLQPLRLPYLAPPGPHDPTSRGPG 210
+ S PG PP S P PPGP P + PG
Sbjct: 533 PGMRGMPGSPGGPGSDGKPGPPGSQGESGRP--GPPGPSGPRGQ-PG 576
Score = 36.6 bits (83), Expect = 0.041
Identities = 50/169 (29%), Positives = 61/169 (36%), Gaps = 30/169 (17%)
Query: 51 QRGRNGAPGT-----QRGVREVGSPTRDQELRAGSSCGRAARGFP----EPGRGGKTQKW 101
+ GR G PG Q GV P + + G + R G P PG+ G+T
Sbjct: 559 ESGRPGPPGPSGPRGQPGVMGFPGP-KGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQ 617
Query: 102 G-----GGTGTPQSPGPCAPQALASLLG----PGKAGCRTRLQGGSSGASPRRLPGGRGP 152
G G G GP PQ L L G PG+ G + G A PGG+G
Sbjct: 618 GPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENG-KPGEPGPKGDAGAPGAPGGKGD 676
Query: 153 AAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPYLAPPGP 201
A A PG + P + A R G P P PPGP
Sbjct: 677 AGA----PGE-RGPPGLAGAPGLRGGAGPPGPEGGKGA-----AGPPGP 715
Score = 36.6 bits (83), Expect = 0.041
Identities = 58/193 (30%), Positives = 70/193 (36%), Gaps = 23/193 (11%)
Query: 53 GRNGAPGTQRGVREVGSPT-RDQELRAGSSCGRAARGFPEP----GRGGKTQKWG--GGT 105
GR+G PG+ GSP + GS A G P P G GK+ G G
Sbjct: 1011 GRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPA 1070
Query: 106 GTPQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPG-TGQ 164
G +PGP + GP T +G + R PG G + PG GQ
Sbjct: 1071 GPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGS----PGPAGQ 1126
Query: 165 RPRNTSLAQASRSGTV-PGLPPASLQPLRLP-YLAPPGPH-DPTSRG----PGRLLTCEP 217
+ S A G V P PP P + PPGP + RG PG P
Sbjct: 1127 QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGP 1186
Query: 218 PSRKLPPPLP-PC 229
P PP P PC
Sbjct: 1187 PG---PPGAPGPC 1196
Score = 33.9 bits (76), Expect = 0.27
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 53 GRNGAPGTQRGVREVGSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPG 112
G G PG Q E GSP G++ ARG P P G +G+P G
Sbjct: 849 GPAGPPGPQGVKGERGSPGGP-----GAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903
Query: 113 PCAPQALASLLG-PGKAGCRTRLQGGSSGASPRRLPGGRGPAAA 155
P P G PG +G + G + + PG +GP A
Sbjct: 904 PPGPAGNTGAPGSPGVSGPK----GDAGQPGEKGSPGAQGPPGA 943
Score = 28.9 bits (63), Expect = 8.6
Identities = 51/197 (25%), Positives = 64/197 (32%), Gaps = 41/197 (20%)
Query: 53 GRNGAPGTQRGVREVGSP----------TRDQ---------ELRAGSSCGRAARGFP--- 90
GRNG PG GSP T Q ++++G + G A G+P
Sbjct: 118 GRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLA-GYPGPA 176
Query: 91 -------EPGRGGKTQKWG-----GGTGTPQSPGPCAPQALASLLGPGKAGCRTRLQGGS 138
PG G G G G P GP P +GP + G
Sbjct: 177 GPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
Query: 139 SGASPRRLPGG---RGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPASLQPLRLPY 195
R LPG +GPA G R + + +G PGL + P
Sbjct: 237 GRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETG-APGLKGENGLPGENGA 295
Query: 196 LAPPGPHD-PTSRG-PG 210
P GP P RG PG
Sbjct: 296 PGPMGPRGAPGERGRPG 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,252,382
Number of Sequences: 37866
Number of extensions: 1730823
Number of successful extensions: 16536
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 1634
Number of HSP's that attempted gapping in prelim test: 10723
Number of HSP's gapped (non-prelim): 5696
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.