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Search of human proteins with 239755294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755294 PREDICTED: hypothetical protein [Homo sapiens]
(162 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755294 PREDICTED: hypothetical protein [Homo sapiens] 333 5e-92
gi|239749787 PREDICTED: hypothetical protein [Homo sapiens] 333 5e-92
gi|239744047 PREDICTED: hypothetical protein [Homo sapiens] 331 1e-91
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 43 1e-04
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 43 1e-04
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 38 0.003
gi|239753506 PREDICTED: hypothetical protein [Homo sapiens] 35 0.037
gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo ... 35 0.037
gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo ... 35 0.037
gi|164419758 bromodomain containing 2 [Homo sapiens] 35 0.037
gi|4826806 bromodomain containing 2 [Homo sapiens] 35 0.037
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 34 0.063
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 34 0.063
gi|13775236 scratch [Homo sapiens] 34 0.063
gi|171906567 peripheral benzodiazepine receptor-associated prote... 33 0.11
gi|171906559 peripheral benzodiazepine receptor-associated prote... 33 0.11
gi|40288197 GATA binding protein 6 [Homo sapiens] 33 0.14
gi|16579828 zinc finger protein 91 [Homo sapiens] 33 0.14
gi|50511941 EMI domain containing 1 [Homo sapiens] 33 0.14
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 32 0.18
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 32 0.18
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 32 0.24
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 32 0.24
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 32 0.24
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 32 0.24
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 32 0.31
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 32 0.31
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 32 0.31
gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo ... 32 0.31
gi|239748296 PREDICTED: hypothetical protein [Homo sapiens] 32 0.31
>gi|239755294 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 333 bits (853), Expect = 5e-92
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA
Sbjct: 1 MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
Query: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE
Sbjct: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
Query: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS
Sbjct: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
>gi|239749787 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 333 bits (853), Expect = 5e-92
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA
Sbjct: 1 MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
Query: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE
Sbjct: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
Query: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS
Sbjct: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
>gi|239744047 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 331 bits (849), Expect = 1e-91
Identities = 161/162 (99%), Positives = 161/162 (99%)
Query: 1 MDFGCPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
MDFGCPRRLPRPHSQEPGSFLRCG SDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA
Sbjct: 1 MDFGCPRRLPRPHSQEPGSFLRCGGSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPA 60
Query: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE
Sbjct: 61 ITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
Query: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS
Sbjct: 121 MRRRDTRAAAGRASAGRVPYHRRPPGFRSSAAQRLTRGTPIS 162
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 43.1 bits (100), Expect = 1e-04
Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 40 KPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANH-------------EAPSRPRPELG 86
+P+ T +P +R++ T +P +PV G E+ G E P RPR +L
Sbjct: 285 QPRVCTFSP-QRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLP 343
Query: 87 QE------GGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPY 140
G + A++ GP G R + R R +R R + G
Sbjct: 344 PHPRSRRYSGDSDSSASSAQSGPLG-----TRSDDTGTGPRRERPSR----RLTTGTPAS 394
Query: 141 HRRPPGFRSSAAQRLTRGTP 160
RRPP RS + RL RG P
Sbjct: 395 PRRPPALRSQSRDRLDRGRP 414
Score = 38.9 bits (89), Expect = 0.002
Identities = 54/171 (31%), Positives = 68/171 (39%), Gaps = 34/171 (19%)
Query: 6 PRRLPRPHSQ---EPGSFLRCGSSD--ASSFQRRQCCGQKPQSLTGA----PVRRLT--- 53
P PRP Q P S G SD ASS Q + + TG P RRLT
Sbjct: 332 PETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGT 391
Query: 54 --STENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAA 111
S PPA+ + SR R + G+ G A GG AQL P+ A +
Sbjct: 392 PASPRRPPAL--------------RSQSRDRLDRGRPRG-APGGRGAQLSVPSPARRARS 436
Query: 112 RPRGRSSSEMRRRD-----TRAAAGRASAGRVPYHRRPPGFRSSAAQRLTR 157
+ R + + RRD + GR S G + P RS AA RL+R
Sbjct: 437 QSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSR 487
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 43.1 bits (100), Expect = 1e-04
Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 40 KPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANH-------------EAPSRPRPELG 86
+P+ T +P +R++ T +P +PV G E+ G E P RPR +L
Sbjct: 285 QPRVCTFSP-QRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLP 343
Query: 87 QE------GGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPY 140
G + A++ GP G R + R R +R R + G
Sbjct: 344 PHPRSRRYSGDSDSSASSAQSGPLG-----TRSDDTGTGPRRERPSR----RLTTGTPAS 394
Query: 141 HRRPPGFRSSAAQRLTRGTP 160
RRPP RS + RL RG P
Sbjct: 395 PRRPPALRSQSRDRLDRGRP 414
Score = 38.9 bits (89), Expect = 0.002
Identities = 54/171 (31%), Positives = 68/171 (39%), Gaps = 34/171 (19%)
Query: 6 PRRLPRPHSQ---EPGSFLRCGSSD--ASSFQRRQCCGQKPQSLTGA----PVRRLT--- 53
P PRP Q P S G SD ASS Q + + TG P RRLT
Sbjct: 332 PETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGT 391
Query: 54 --STENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAA 111
S PPA+ + SR R + G+ G A GG AQL P+ A +
Sbjct: 392 PASPRRPPAL--------------RSQSRDRLDRGRPRG-APGGRGAQLSVPSPARRARS 436
Query: 112 RPRGRSSSEMRRRD-----TRAAAGRASAGRVPYHRRPPGFRSSAAQRLTR 157
+ R + + RRD + GR S G + P RS AA RL+R
Sbjct: 437 QSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSR 487
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 38.1 bits (87), Expect = 0.003
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 27/140 (19%)
Query: 34 RQCCGQKPQSLTGAPVRR--LTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGG 91
+ C +P + + P L + E+PP + P G A A AP RP+ E +
Sbjct: 495 KSCLKHRPAAASEGPAASPPLAAAESPP-VEPGPGSLDAEAA---APERPKAERAEAPPA 550
Query: 92 AIGGAA---------AQLQGPTGFGVAA--ARPRGRSSSEMRRRDTRAAAGRASAGRVPY 140
AA A+L+G F V++ ARPR S + R ++GR+P
Sbjct: 551 GAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLER----------ASGRLPL 600
Query: 141 HRRPPGFRSSAAQRLTRGTP 160
R P +RS AA +G P
Sbjct: 601 ARSGPVWRSEAALDDLQGLP 620
>gi|239753506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 34.7 bits (78), Expect = 0.037
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 4 GCPRRLPRPHSQEPGSFLRCGSSDA----SSFQRRQCCGQKPQSLTGAPVRRLTSTENPP 59
G R PRP + PGS RCG S+A + RRQ G + L G RR S PP
Sbjct: 62 GTWRASPRP-GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLG---RR--SAHGPP 115
Query: 60 AITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGR-SS 118
P+ + P P E + G G G + P AA+ RGR
Sbjct: 116 ---PLRVAPARVASQGRQPQLPADE--KVGEGDWPGGWGEALRPRAGSAAASTDRGRWGK 170
Query: 119 SEMR--RRDTRAAAGRASAGR 137
++R R++T A ASAGR
Sbjct: 171 LKLRPTRQETFRPAYLASAGR 191
>gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo
sapiens]
Length = 246
Score = 34.7 bits (78), Expect = 0.037
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 4 GCPRRLPRPHSQEPGSFLRCGSSDA----SSFQRRQCCGQKPQSLTGAPVRRLTSTENPP 59
G R PRP + PGS RCG S+A + RRQ G + L G RR S PP
Sbjct: 112 GTWRASPRP-GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLG---RR--SAHGPP 165
Query: 60 AITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGR-SS 118
P+ + P P E + G G G + P AA+ RGR
Sbjct: 166 ---PLRVAPARVASQGRQPQLPADE--KVGEGDWPGGWGEALRPRAGSAAASTDRGRWGK 220
Query: 119 SEMR--RRDTRAAAGRASAGR 137
++R R++T A ASAGR
Sbjct: 221 LKLRPTRQETFRPAYLASAGR 241
>gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo
sapiens]
Length = 196
Score = 34.7 bits (78), Expect = 0.037
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 4 GCPRRLPRPHSQEPGSFLRCGSSDA----SSFQRRQCCGQKPQSLTGAPVRRLTSTENPP 59
G R PRP + PGS RCG S+A + RRQ G + L G RR S PP
Sbjct: 62 GTWRASPRP-GRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLG---RR--SAHGPP 115
Query: 60 AITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGR-SS 118
P+ + P P E + G G G + P AA+ RGR
Sbjct: 116 ---PLRVAPARVASQGRQPQLPADE--KVGEGDWPGGWGEALRPRAGSAAASTDRGRWGK 170
Query: 119 SEMR--RRDTRAAAGRASAGR 137
++R R++T A ASAGR
Sbjct: 171 LKLRPTRQETFRPAYLASAGR 191
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.7 bits (78), Expect = 0.037
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 77 APSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAA 129
AP P+P+ ++ G+ GG+AA GP+GFG P G S +++ ++ T+ A
Sbjct: 578 APRPPQPKKSKKASGSGGGSAA--LGPSGFG-----PSGGSGTKLPKKATKTA 623
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.7 bits (78), Expect = 0.037
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 77 APSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAA 129
AP P+P+ ++ G+ GG+AA GP+GFG P G S +++ ++ T+ A
Sbjct: 578 APRPPQPKKSKKASGSGGGSAA--LGPSGFG-----PSGGSGTKLPKKATKTA 623
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 33.9 bits (76), Expect = 0.063
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 10/121 (8%)
Query: 46 GAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGG-AAAQLQGPT 104
G+P+RR + P TP G + G + R P E GG G A L GP
Sbjct: 382 GSPLRRERAWPPPSLRTPTPGLTEGGGTGLPSKQRRGPSPKTELGGPQGSLGRASLSGPF 441
Query: 105 GFGVAAARPRGRSSSEMRRRDTRAAAGRASAG-RVPYHRR----PPGFRSSAAQRLTRGT 159
G G P S + R + R G +PY R PPG R + + R
Sbjct: 442 GPGPQGGPP----SRDRRHLGVQIGRVRVPLGSALPYPARSELAPPGARDALSPDPERPC 497
Query: 160 P 160
P
Sbjct: 498 P 498
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 33.9 bits (76), Expect = 0.063
Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 14/146 (9%)
Query: 10 PRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTG-EE 68
P P +E + R G SS RR ++P GAP RR + PP T V
Sbjct: 913 PPPPRRESRTETRWGPRPGSS--RRGIPPEEP----GAPPRRAGPIKKPPPPTKVEELPP 966
Query: 69 KAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRA 128
K E P P+P+ + G +GG + P ++ A PR R R +
Sbjct: 967 KPLEQGDETPKPPKPDPLKITKGKLGGPK---ETPPNGNLSPA-PRLRRDYSYERVGPTS 1022
Query: 129 AAGRASAGRVPYHRRPPGFRSSAAQR 154
GR GR Y R GFR + R
Sbjct: 1023 CRGR---GRGEYFARGRGFRGTYGGR 1045
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 33.9 bits (76), Expect = 0.063
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 58 PPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQG--PTGFGVAAARPRG 115
P V GE A P PRPEL GG I G AA +G F + R R
Sbjct: 67 PMYAAAVRGELGPAAAGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFITDGRSRR 126
Query: 116 RSSSEMRRRDTRAAAGRASA 135
++S+ + AA ASA
Sbjct: 127 KASN----AGSAAAPSTASA 142
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 33.1 bits (74), Expect = 0.11
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 19/129 (14%)
Query: 5 CPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPV 64
CP P P ++ P + G D SS Q P L T+ PP P
Sbjct: 1029 CPSPHPSPEARAPLASASPGPGDPSSPL------QHPAPL---------GTQEPPGAPPA 1073
Query: 65 TGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRR 124
+ + +HE P P P +E G A+ G + + T + G ++ + ++
Sbjct: 1074 SPSREMAKGSHEDP--PAPCSQEEAGAAVLGTSEERTAST--STLGEKDPGPAAPSLAKQ 1129
Query: 125 DTRAAAGRA 133
+ AG A
Sbjct: 1130 EAEWTAGEA 1138
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 33.1 bits (74), Expect = 0.11
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 19/129 (14%)
Query: 5 CPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPV 64
CP P P ++ P + G D SS Q P L T+ PP P
Sbjct: 1089 CPSPHPSPEARAPLASASPGPGDPSSPL------QHPAPL---------GTQEPPGAPPA 1133
Query: 65 TGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRR 124
+ + +HE P P P +E G A+ G + + T + G ++ + ++
Sbjct: 1134 SPSREMAKGSHEDP--PAPCSQEEAGAAVLGTSEERTAST--STLGEKDPGPAAPSLAKQ 1189
Query: 125 DTRAAAGRA 133
+ AG A
Sbjct: 1190 EAEWTAGEA 1198
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 32.7 bits (73), Expect = 0.14
Identities = 44/168 (26%), Positives = 57/168 (33%), Gaps = 22/168 (13%)
Query: 10 PRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTGEEK 69
P + PG F+ ++ A++ P + G+ + L P
Sbjct: 159 PAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGG 218
Query: 70 AGV-ANHEAPSRPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGR---------SSS 119
AG S P G GG A GGAA GP G G AAA R ++
Sbjct: 219 AGAHPGWPQASADSPPYGSGGGAAGGGAA----GPGGAGSAAAHVSARFPYSPSPPMANG 274
Query: 120 EMRRRDTRAAAGRASAGRV--------PYHRRPPGFRSSAAQRLTRGT 159
R AAAG AG V R P + S +A R GT
Sbjct: 275 AAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGT 322
>gi|16579828 zinc finger protein 91 [Homo sapiens]
Length = 570
Score = 32.7 bits (73), Expect = 0.14
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 80 RPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRR--RDTRAAAGRASAGR 137
RP + QEGG A A + Q VAAA P G +SS + R RD AA A+A
Sbjct: 9 RPPEQQDQEGGEAAKAAPEEPQQRPPEAVAAA-PAGTTSSRVLRGGRDRGRAAAAAAAAA 67
Query: 138 VPYHRR---PPGFRSSAAQR 154
V R+ P RSS + R
Sbjct: 68 VSRRRKAEYPRRRRSSPSAR 87
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 32.7 bits (73), Expect = 0.14
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 47 APVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGG--AAAQLQGPT 104
A + LT E P TP T E+ A + P P G G G + A L GPT
Sbjct: 154 AKMTMLTVIEQPVPPTPATPEDPAPLWG------PPPAQGSPGDGGLQDQVGAWGLPGPT 207
Query: 105 G-FGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYHRRPPG 146
G G A +R + + GRA A P R PPG
Sbjct: 208 GPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPG 250
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 32.3 bits (72), Expect = 0.18
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 69 KAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQ--GPTGFGVAAARPRGRSSSEMRRRDT 126
+AG A S Q GG A L+ P A P GR SE R R
Sbjct: 110 RAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARGR-- 167
Query: 127 RAAAGRASAGRVPYHRRPPGFRSSAAQR 154
+G A RVP H PPG ++R
Sbjct: 168 ---SGAECARRVPLHHGPPGASGVGSER 192
Score = 30.0 bits (66), Expect = 0.91
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 38 GQKPQSLTGAP-VRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELG----QEGGGA 92
G + + +GA RR+ PP + V E H+ P+R P G G
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARGPPFPGISGMTRGPVV 220
Query: 93 IGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTR--AAAGRASAGRVP 139
+ G Q + P G + +R G + E R R A GRA G P
Sbjct: 221 LSGVNRQHRWPP--GASPSRSLGEAGGERPARALRRPRAPGRAGGGGPP 267
Score = 27.7 bits (60), Expect = 4.5
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 20/127 (15%)
Query: 24 GSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRP-R 82
G++ A S R+ G G+P+ R+++ P P G PSR R
Sbjct: 36 GAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPG----------GPSRSER 85
Query: 83 PELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYHR 142
P G G + GP G + + GR+ S R R + AA A G +
Sbjct: 86 PRAGLRPGAFVS------PGPLGRRASCS---GRAGSAGRLRCSAAALSAAQRGGPARAQ 136
Query: 143 RPPGFRS 149
PP R+
Sbjct: 137 VPPALRT 143
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 32.3 bits (72), Expect = 0.18
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 69 KAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQ--GPTGFGVAAARPRGRSSSEMRRRDT 126
+AG A S Q GG A L+ P A P GR SE R R
Sbjct: 110 RAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARGR-- 167
Query: 127 RAAAGRASAGRVPYHRRPPGFRSSAAQR 154
+G A RVP H PPG ++R
Sbjct: 168 ---SGAECARRVPLHHGPPGASGVGSER 192
Score = 30.0 bits (66), Expect = 0.91
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 38 GQKPQSLTGAP-VRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELG----QEGGGA 92
G + + +GA RR+ PP + V E H+ P+R P G G
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARGPPFPGISGMTRGPVV 220
Query: 93 IGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTR--AAAGRASAGRVP 139
+ G Q + P G + +R G + E R R A GRA G P
Sbjct: 221 LSGVNRQHRWPP--GASPSRSLGEAGGERPARALRRPRAPGRAGGGGPP 267
Score = 27.7 bits (60), Expect = 4.5
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 20/127 (15%)
Query: 24 GSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRP-R 82
G++ A S R+ G G+P+ R+++ P P G PSR R
Sbjct: 36 GAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAPPPPPPPG----------GPSRSER 85
Query: 83 PELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYHR 142
P G G + GP G + + GR+ S R R + AA A G +
Sbjct: 86 PRAGLRPGAFVS------PGPLGRRASCS---GRAGSAGRLRCSAAALSAAQRGGPARAQ 136
Query: 143 RPPGFRS 149
PP R+
Sbjct: 137 VPPALRT 143
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 32.0 bits (71), Expect = 0.24
Identities = 42/144 (29%), Positives = 49/144 (34%), Gaps = 39/144 (27%)
Query: 5 CPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPV 64
C +R RP + FL GSS CG +PQ L P R L PP P
Sbjct: 238 CGKRTQRPEQR----FLCRGSS---------FCGHRPQRLH--PGRPLPPQRRPPGPAPA 282
Query: 65 TGEEKAGVAN-----------HEAPSRPRP------------ELGQEGGGAIGGAAAQLQ 101
G A A + P P +L G GA GGA+ +
Sbjct: 283 AAGATRGTAAPPGRDPSAWFLDSASACPTPLAARSWHPFVANKLCGRGKGAGGGASRPKE 342
Query: 102 GPTGFGVAAARPR-GRSSSEMRRR 124
G A PR GR S RRR
Sbjct: 343 GVGSGRARAWEPRGGRESGRSRRR 366
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 32.0 bits (71), Expect = 0.24
Identities = 42/144 (29%), Positives = 49/144 (34%), Gaps = 39/144 (27%)
Query: 5 CPRRLPRPHSQEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENPPAITPV 64
C +R RP + FL GSS CG +PQ L P R L PP P
Sbjct: 238 CGKRTQRPEQR----FLCRGSS---------FCGHRPQRLH--PGRPLPPQRRPPGPAPA 282
Query: 65 TGEEKAGVAN-----------HEAPSRPRP------------ELGQEGGGAIGGAAAQLQ 101
G A A + P P +L G GA GGA+ +
Sbjct: 283 AAGATRGTAAPPGRDPSAWFLDSASACPTPLAARSWHPFVANKLCGRGKGAGGGASRPKE 342
Query: 102 GPTGFGVAAARPR-GRSSSEMRRR 124
G A PR GR S RRR
Sbjct: 343 GVGSGRARAWEPRGGRESGRSRRR 366
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 32.0 bits (71), Expect = 0.24
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 90 GGAIGGAAAQLQGPTG------FGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYHRR 143
GGA AA G TG + + RG S RRD R+++GR S R HRR
Sbjct: 160 GGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGR-SKERHREHRR 218
Query: 144 PPGFRSSAAQRLTR 157
G R + +R
Sbjct: 219 RDGQRGGSEASKSR 232
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 32.0 bits (71), Expect = 0.24
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 90 GGAIGGAAAQLQGPTG------FGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYHRR 143
GGA AA G TG + + RG S RRD R+++GR S R HRR
Sbjct: 160 GGASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGR-SKERHREHRR 218
Query: 144 PPGFRSSAAQRLTR 157
G R + +R
Sbjct: 219 RDGQRGGSEASKSR 232
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 31.6 bits (70), Expect = 0.31
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 44 LTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGP 103
L G P R S +P TG + G + P R RP + + P
Sbjct: 2 LLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPR------------SPEPAAP 49
Query: 104 TGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYH----RRPPG-------FRSSAA 152
+G R S+ RRRDT AG + R H RRPP RSSAA
Sbjct: 50 SGV---------RGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAA 100
Query: 153 QRLTR 157
R R
Sbjct: 101 SRARR 105
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 31.6 bits (70), Expect = 0.31
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 44 LTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGAIGGAAAQLQGP 103
L G P R S +P TG + G + P R RP + + P
Sbjct: 2 LLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPR------------SPEPAAP 49
Query: 104 TGFGVAAARPRGRSSSEMRRRDTRAAAGRASAGRVPYH----RRPPG-------FRSSAA 152
+G R S+ RRRDT AG + R H RRPP RSSAA
Sbjct: 50 SGV---------RGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAA 100
Query: 153 QRLTR 157
R R
Sbjct: 101 SRARR 105
>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
Length = 577
Score = 31.6 bits (70), Expect = 0.31
Identities = 34/139 (24%), Positives = 46/139 (33%), Gaps = 16/139 (11%)
Query: 15 QEPGSFLRCGSSDASSFQRRQCCGQKPQSLTGAPVRRLTSTENP----------PAITPV 64
Q+P + ++ GS A+ R G P G + +T P P + V
Sbjct: 300 QDPRAAMQRGSLPANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHV 359
Query: 65 TGEEKAGVANHEAPS----RPRPELGQEGGGAIGGAAAQLQGPTGFGVAAARPRGRSSSE 120
G E G HE PRP + + G + L G G RG +
Sbjct: 360 PGHESRGPPPHELRGGPLPEPRPLMAEPRGPMLDQRGPPLDGRGGRDPRGIDARGMEARA 419
Query: 121 MRRR--DTRAAAGRASAGR 137
M R D R RA R
Sbjct: 420 MEARGLDARGLEARAMEAR 438
>gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo
sapiens]
Length = 186
Score = 31.6 bits (70), Expect = 0.31
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 17/137 (12%)
Query: 33 RRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGA 92
R CG K +L AP R PA A A+ EAP RPRP G G G
Sbjct: 39 RSSSCGLKGLNLALAPER--------PAADRAQLFAVAVGASGEAPGRPRPPGGVRGLGR 90
Query: 93 IGGAAAQLQGPTG----FGVAAARPRGRSSSE----MRRRDTRAAAGRASAGRVPYHRRP 144
AA +G TG F V + GR +E + + AG S P+ R
Sbjct: 91 -RPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQRAGSKSTAPTPFSVRV 149
Query: 145 PGFRSSAAQRLTRGTPI 161
++ R T P+
Sbjct: 150 RQKMATTPPRPTLRNPV 166
>gi|239748296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 31.6 bits (70), Expect = 0.31
Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 17/137 (12%)
Query: 33 RRQCCGQKPQSLTGAPVRRLTSTENPPAITPVTGEEKAGVANHEAPSRPRPELGQEGGGA 92
R CG K +L AP R PA A A+ EAP RPRP G G G
Sbjct: 39 RSSSCGLKGLNLALAPER--------PAADRAQLFAVAVGASGEAPGRPRPPGGVRGLGR 90
Query: 93 IGGAAAQLQGPTG----FGVAAARPRGRSSSE----MRRRDTRAAAGRASAGRVPYHRRP 144
AA +G TG F V + GR +E + + AG S P+ R
Sbjct: 91 -RPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQRAGSKSTAPTPFSVRV 149
Query: 145 PGFRSSAAQRLTRGTPI 161
++ R T P+
Sbjct: 150 RQKMATTPPRPTLRNPV 166
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,926,730
Number of Sequences: 37866
Number of extensions: 430057
Number of successful extensions: 2632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 2494
Number of HSP's gapped (non-prelim): 382
length of query: 162
length of database: 18,247,518
effective HSP length: 94
effective length of query: 68
effective length of database: 14,688,114
effective search space: 998791752
effective search space used: 998791752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.