Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C9orf95 Sequence: fasta or formatted (175aa) NCBI GI: 189027124
Description:

nicotinamide riboside kinase 1 isoform 2

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [199aa] nicotinamide riboside kinase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          7           1
 C cysteine            1.7          3           1
 D aspartate           6.3         11           2
 E glutamate           9.1         16           2
 F phenylalanine       4.6          8           2
 G glycine             4.6          8           1
 H histidine           1.7          3           1
 I isoleucine          6.9         12           2
 K lysine              6.3         11           1
 L leucine             9.1         16           2
 M methionine          4.0          7           2
 N asparagine          4.0          7           1
 P proline             4.0          7           2
 Q glutamine           6.3         11           1
 R arginine            1.7          3           1
 S serine              7.4         13           1
 T threonine           5.7         10           2
 V valine              6.3         11           2
 W tryptophan          1.7          3           1
 Y tyrosine            4.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nicotinamide riboside kinase 1 isoform 2 
C9orf95               0.955   nicotinamide riboside kinase 1 isoform 1 
ITGB1BP3              0.426   integrin beta 1 binding protein 3 
N4BP2L1               0.036   NEDD4 binding protein 2-like 1 isoform 2 
N4BP2L1               0.036   NEDD4 binding protein 2-like 1 isoform 1 
UCK1                  0.027   uridine-cytidine kinase 1 isoform b 
UCK1                  0.027   uridine-cytidine kinase 1 isoform a 
UCKL1                 0.024   uridine-cytidine kinase 1-like 1 
N4BP2                 0.021   Nedd4 binding protein 2 
PBRM1                 0.021   polybromo 1 isoform 1 
PBRM1                 0.021   polybromo 1 isoform 2 
PBRM1                 0.021   polybromo 1 isoform 4 
TRIM15                0.009   tripartite motif protein 15 
UCK2                  0.009   uridine-cytidine kinase 2 
ARL13A                0.006   ADP-ribosylation factor-like 13 isoform b 
ARL13A                0.006   ADP-ribosylation factor-like 13 isoform a 
ARL13A                0.006   ADP-ribosylation factor-like 13 isoform a 
UBE2R2                0.006   ubiquitin-conjugating enzyme UBC3B 
N4BP2L2               0.006   phosphonoformate immuno-associated protein 5 isoform ...
COASY                 0.006   coenzyme A synthase isoform c 
COASY                 0.006   coenzyme A synthase isoform b 
COASY                 0.006   coenzyme A synthase isoform a 
COASY                 0.006   coenzyme A synthase isoform a 
COASY                 0.006   coenzyme A synthase isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press