Guide to the Human Genome
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Name: TOB1 Sequence: fasta or formatted (345aa) NCBI GI: 5032187
Description:

transducer of ERBB2, 1

Referenced in:

Additional Cell Cycle Functions
Epidermal Growth Factor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         18           2
 C cysteine            0.6          2           1
 D aspartate           4.1         14           2
 E glutamate           4.9         17           2
 F phenylalanine       5.5         19           1
 G glycine             7.0         24           2
 H histidine           1.2          4           1
 I isoleucine          4.3         15           2
 K lysine              6.1         21           3
 L leucine             7.8         27           2
 M methionine          2.6          9           1
 N asparagine          7.2         25           2
 P proline             9.6         33           8
 Q glutamine           8.7         30           6
 R arginine            2.6          9           3
 S serine             10.4         36           3
 T threonine           3.2         11           2
 V valine              5.2         18           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transducer of ERBB2, 1 
TOB2                  0.499   transducer of ERBB2, 2 
BTG1                  0.127   B-cell translocation protein 1 
BTG2                  0.120   B-cell translocation gene 2 
BTG3                  0.092   B-cell translocation gene 3 isoform b 
BTG4                  0.080   B-cell translocation gene 4 
BTG3                  0.075   B-cell translocation gene 3 isoform a 
MEF2A                 0.044   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.044   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.044   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.044   myocyte enhancer factor 2A isoform 1 
ZNF462                0.035   zinc finger protein 462 
HTT                   0.031   huntingtin 
FOXJ2                 0.031   forkhead box J2 
BRD4                  0.028   bromodomain-containing protein 4 isoform long 
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
SMARCA2               0.027   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.027   SWI/SNF-related matrix-associated actin-dependent re...
ZFHX3                 0.027   AT-binding transcription factor 1 
KCNN3                 0.027   small conductance calcium-activated potassium chann...
CDX2                  0.025   caudal type homeobox 2 
MEF2D                 0.025   myocyte enhancer factor 2D 
NCOA3                 0.024   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.024   nuclear receptor coactivator 3 isoform b 
HNRNPUL1              0.024   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.024   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
BARHL2                0.024   BarH-like homeobox 2 
SATB1                 0.022   special AT-rich sequence binding protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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