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Search of human proteins with 119120915
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119120915 rhophilin 1 [Homo sapiens]
(670 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119120915 rhophilin 1 [Homo sapiens] 1347 0.0
gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo sapiens] 484 e-137
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 134 4e-31
gi|241982780 programmed cell death 6 interacting protein isoform... 96 8e-20
gi|22027538 programmed cell death 6 interacting protein isoform ... 96 8e-20
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 57 7e-08
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof... 55 2e-07
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo... 55 2e-07
gi|194018553 solute carrier family 9 isoform 3 regulator 2 isofo... 53 8e-07
gi|71897229 solute carrier family 9 isoform 3 regulator 2 isofor... 53 8e-07
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 52 1e-06
gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo... 52 1e-06
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 52 2e-06
gi|62865654 regulator of G-protein signalling 3 isoform 3 [Homo ... 52 2e-06
gi|153070254 MAGI family member, X-linked isoform b [Homo sapiens] 51 4e-06
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 49 2e-05
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ... 49 2e-05
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 49 2e-05
gi|4759140 sodium/hydrogen exchanger regulatory factor 1 [Homo s... 47 4e-05
gi|153070258 MAGI family member, X-linked isoform a [Homo sapiens] 47 7e-05
gi|8922944 lin-7 homolog C [Homo sapiens] 44 4e-04
gi|11545920 lin-7 homolog B [Homo sapiens] 44 4e-04
gi|223890252 glutamate receptor interacting protein 1 [Homo sapi... 44 5e-04
gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens] 44 5e-04
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 44 5e-04
gi|112382257 InaD-like [Homo sapiens] 44 5e-04
gi|4759306 lin-7 homolog A [Homo sapiens] 44 5e-04
gi|21361142 PDZ domain containing 1 [Homo sapiens] 43 8e-04
gi|193083191 synaptopodin 2 isoform c [Homo sapiens] 43 8e-04
gi|193083185 synaptopodin 2 isoform b [Homo sapiens] 43 8e-04
>gi|119120915 rhophilin 1 [Homo sapiens]
Length = 670
Score = 1347 bits (3486), Expect = 0.0
Identities = 670/670 (100%), Positives = 670/670 (100%)
Query: 1 MILEERPDGAGAGEESPRLQGCDSLTQIQCGQLQSRRAQIHQQIDKELQMRTGAENLYRA 60
MILEERPDGAGAGEESPRLQGCDSLTQIQCGQLQSRRAQIHQQIDKELQMRTGAENLYRA
Sbjct: 1 MILEERPDGAGAGEESPRLQGCDSLTQIQCGQLQSRRAQIHQQIDKELQMRTGAENLYRA 60
Query: 61 TSNNRVRETVALELSYVNSNLQLLKEELEELSGGVDPGRHGSEAVTVPMIPLGLKETKEL 120
TSNNRVRETVALELSYVNSNLQLLKEELEELSGGVDPGRHGSEAVTVPMIPLGLKETKEL
Sbjct: 61 TSNNRVRETVALELSYVNSNLQLLKEELEELSGGVDPGRHGSEAVTVPMIPLGLKETKEL 120
Query: 121 DWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDA 180
DWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDA
Sbjct: 121 DWSTPLKELISVHFGEDGASYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDA 180
Query: 181 RFLTPARSLGLFFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDRSCTEGAR 240
RFLTPARSLGLFFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDRSCTEGAR
Sbjct: 181 RFLTPARSLGLFFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDRSCTEGAR 240
Query: 241 RAMEAFQRAAGAFSLLRENFSHAPSPDMSAASLCALEQLMMAQAQECVFEGLSPPASMAP 300
RAMEAFQRAAGAFSLLRENFSHAPSPDMSAASLCALEQLMMAQAQECVFEGLSPPASMAP
Sbjct: 241 RAMEAFQRAAGAFSLLRENFSHAPSPDMSAASLCALEQLMMAQAQECVFEGLSPPASMAP 300
Query: 301 QDCLAQLRLAQEAAQVAAEYRLVHRTMAQPPVHDYVPVSWTALVHVKAEYFRSLAHYHVA 360
QDCLAQLRLAQEAAQVAAEYRLVHRTMAQPPVHDYVPVSWTALVHVKAEYFRSLAHYHVA
Sbjct: 301 QDCLAQLRLAQEAAQVAAEYRLVHRTMAQPPVHDYVPVSWTALVHVKAEYFRSLAHYHVA 360
Query: 361 MALCDGSPATEGELPTHEQVFLQPPTSSKPRGPVLPQELEERRQLGKAHLKRAILGQEEA 420
MALCDGSPATEGELPTHEQVFLQPPTSSKPRGPVLPQELEERRQLGKAHLKRAILGQEEA
Sbjct: 361 MALCDGSPATEGELPTHEQVFLQPPTSSKPRGPVLPQELEERRQLGKAHLKRAILGQEEA 420
Query: 421 LRLHALCRVLREVDLLRAVISQTLQRSLAKYAELDREDDFCEAAEAPDIQPKTHQKPEAR 480
LRLHALCRVLREVDLLRAVISQTLQRSLAKYAELDREDDFCEAAEAPDIQPKTHQKPEAR
Sbjct: 421 LRLHALCRVLREVDLLRAVISQTLQRSLAKYAELDREDDFCEAAEAPDIQPKTHQKPEAR 480
Query: 481 MPRLSQGKGPDIFHRLGPLSVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDSPVLIAAVIP 540
MPRLSQGKGPDIFHRLGPLSVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDSPVLIAAVIP
Sbjct: 481 MPRLSQGKGPDIFHRLGPLSVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDSPVLIAAVIP 540
Query: 541 GSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKAAGEAGASLQVVSLLPSSRLPSLG 600
GSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKAAGEAGASLQVVSLLPSSRLPSLG
Sbjct: 541 GSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKAAGEAGASLQVVSLLPSSRLPSLG 600
Query: 601 DRRPVLLGPRGLLRSQREHGCKTPASTWASPRPLLNWSRKAQQGKTGGCPQPCAPVKPAP 660
DRRPVLLGPRGLLRSQREHGCKTPASTWASPRPLLNWSRKAQQGKTGGCPQPCAPVKPAP
Sbjct: 601 DRRPVLLGPRGLLRSQREHGCKTPASTWASPRPLLNWSRKAQQGKTGGCPQPCAPVKPAP 660
Query: 661 PSSLKHPGWP 670
PSSLKHPGWP
Sbjct: 661 PSSLKHPGWP 670
>gi|228008333 rhophilin, Rho GTPase binding protein 2 [Homo sapiens]
Length = 686
Score = 484 bits (1247), Expect = e-137
Identities = 265/578 (45%), Positives = 370/578 (64%), Gaps = 6/578 (1%)
Query: 20 QGCDSLTQIQCGQLQSRRAQIHQQIDKELQMRTGAENLYRATSNNRVRETVALELSYVNS 79
+GC+ L Q +LQ++RA ++QQI K ++MRTGAENL + +N++VRE V LELS+VNS
Sbjct: 23 KGCNPLAQTGRSKLQNQRAALNQQILKAVRMRTGAENLLKVATNSKVREQVRLELSFVNS 82
Query: 80 NLQLLKEELEELSGGVDPGRHGSEAVTVPMIPLGLKETKELDWSTPLKELISVHFGEDGA 139
+LQ+LKEELE L+ V ++ EA T+P+IPLGLKETK++D++ LK+ I H+ EDG
Sbjct: 83 DLQMLKEELEGLNISVGVYQNTEEAFTIPLIPLGLKETKDVDFAVVLKDFILEHYSEDGY 142
Query: 140 SYEAEIRELEALRQAMRTPSRNESGLELLTAYYNQLCFLDARFLTPARSLGLFFHWYDSL 199
YE EI +L LRQA RTPSR+E+G+ELL Y+ QL F+++RF P R +GL F WYDSL
Sbjct: 143 LYEDEIADLMDLRQACRTPSRDEAGVELLMTYFIQLGFVESRFFPPTRQMGLLFTWYDSL 202
Query: 200 TGVPAQQRALAFEKGSVLFNIGALHTQIGARQDRSCTEGARRAMEAFQRAAGAFSLLREN 259
TGVP Q+ L EK SVLFN GAL+TQIG R DR G A++AFQRAAG + L++
Sbjct: 203 TGVPVSQQNLLLEKASVLFNTGALYTQIGTRCDRQTQAGLESAIDAFQRAAGVLNYLKDT 262
Query: 260 FSHAPSPDMSAASLCALEQLMMAQAQECVFEGLSPPASMAPQDCLAQLRLAQEAAQVAAE 319
F+H PS DMS A L L ++M+AQAQE VFE +S P + +++AQEAA+V
Sbjct: 263 FTHTPSYDMSPAMLSVLVKMMLAQAQESVFEKISLPG--IRNEFFMLVKVAQEAAKVGEV 320
Query: 320 YRLVHRTMAQPPVHDYVPVSWTALVHVKAEYFRSLAHYHVAMALCDGSPATEGELPTHEQ 379
Y+ +H M+Q PV + +P SW +L VKA ++ +LAHY A+ L D +L H++
Sbjct: 321 YQQLHAAMSQAPVKENIPYSWASLACVKAHHYAALAHYFTAILLIDHQVKPGTDL-DHQE 379
Query: 380 VFLQPPTSSKPRGPVLPQEL---EERRQLGKAHLKRAILGQEEALRLHALCRVLREVDLL 436
L P G L ++RRQLGK+HL+RA+ EE++R +LC+ LR +++L
Sbjct: 380 KCLSQLYDHMPEGLTPLATLKNDQQRRQLGKSHLRRAMAHHEESVREASLCKKLRSIEVL 439
Query: 437 RAVISQTLQRSLAKYAELDREDDFCEAAEAPDIQPKTHQKPEARMPRLSQGKGPDIFHRL 496
+ V+ +RS YA+ EDD +AP + KT Q+ + +P+ S+ D F +L
Sbjct: 440 QKVLCAAQERSRLTYAQHQEEDDLLNLIDAPSVVAKTEQEVDIILPQFSKLTVTDFFQKL 499
Query: 497 GPLSVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIV 556
GPLSVFSA RW + T EG G TLRG++PV + + P A+ AG +EGDYIV
Sbjct: 500 GPLSVFSANKRWTPPRSIRFTAEEGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIV 559
Query: 557 SVNGQPCRWWRHAEVVTELKAAGEAGASLQVVSLLPSS 594
S+ C+W +EV+ LK+ GE ++VVSLL S+
Sbjct: 560 SIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLLDST 597
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
[Homo sapiens]
Length = 1636
Score = 134 bits (336), Expect = 4e-31
Identities = 115/413 (27%), Positives = 187/413 (45%), Gaps = 62/413 (15%)
Query: 107 VPMIPLGLKETKELDWSTPLKELISVHFGEDGASYEAEIRELEALRQ-AMRTPSRNESGL 165
+PMI L LKE + + +K+ + ++GE+ +Y E+++LE LRQ A+R P R+ G
Sbjct: 7 MPMIWLDLKEAGDFHFQPAVKKFVLKNYGENPEAYNEELKKLELLRQNAVRVP-RDFEGC 65
Query: 166 ELLTAYYNQLCFLDARF-LTPARSLGLFFHWYDSLTGVPAQQRALAFEKGSVLFNIGALH 224
+L Y QL +L +R + + + W + +G + +E+ +L+N+GALH
Sbjct: 66 SVLRKYLGQLHYLQSRVPMGSGQEAAVPVTWTEIFSGKSVAHEDIKYEQACILYNLGALH 125
Query: 225 TQIGARQDRSCTEGARRAMEAFQRAAGAFSLLRENFSHAPSPDMSAASLCALEQLMMAQA 284
+ +GA R EG + + FQ AAGAF+ LRE+F A S DMS L LM+ QA
Sbjct: 126 SMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQA 185
Query: 285 QECVFEGLSPPASMAPQDCLAQLRLAQEAAQVAAEYRLVHRTMAQPPVHDY---VPVSWT 341
QEC+ E + D +A+ +AQV Y+ R + P + W
Sbjct: 186 QECLLE-------KSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWK 238
Query: 342 ALVHVKAEYFRSLAHYHVAMALCDGSPATEGELPTHEQVFLQPPTSSKPRGPVLPQELEE 401
LV +K YF ++AH H+ ++ EE
Sbjct: 239 KLVQMKIYYFAAVAHLHMG------------------------------------KQAEE 262
Query: 402 RRQLGK--AHLKRAILGQEEALRLHALCRVLREVDLLRAVISQTLQRSLAKYAELDREDD 459
+++ G+ A+ + A+ EA++L + D ++ + T+ KY +++D
Sbjct: 263 QQKFGERVAYFQSALDKLNEAIKL-----AKGQPDTVQDALRFTMDVIGGKYNSAKKDND 317
Query: 460 FC--EAAEAPD-IQPKTHQ---KPEARMPRLSQGKGPDIFHRLGPLSVFSAKN 506
F EA A D +QP KP P GPDIF +L P++ A +
Sbjct: 318 FIYHEAVPALDTLQPVKGAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASS 370
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 96.3 bits (238), Expect = 8e-20
Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
Query: 110 IPLGLKETKELDWSTPLKELISVHF---GEDGASYEAEIRELEALRQAM--RTPSRNESG 164
I + LK+T E+D + PL + I + GE+ A Y EL LR+A R ++E
Sbjct: 5 ISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGA 64
Query: 165 LELLTAYYNQLCFLDARFLTPARSLGLFFHWYD-----SLTG--VPAQQRALAFEKGSVL 217
LE L YY+Q+C ++ +F + L F W D SL G V +L +EK VL
Sbjct: 65 LETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVL 124
Query: 218 FNIGALHTQIGARQDRSCTEGARRAMEAFQRAAGAFSLLREN----FSHAPSPDMSAASL 273
FN AL +QI A Q+ EG + A + +Q A+GAF ++E S P+ D+S ++
Sbjct: 125 FNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTV 184
Query: 274 CALEQLMMAQAQECVF 289
L +M+AQAQE F
Sbjct: 185 GTLSLIMLAQAQEVFF 200
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 96.3 bits (238), Expect = 8e-20
Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 16/196 (8%)
Query: 110 IPLGLKETKELDWSTPLKELISVHF---GEDGASYEAEIRELEALRQAM--RTPSRNESG 164
I + LK+T E+D + PL + I + GE+ A Y EL LR+A R ++E
Sbjct: 5 ISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGA 64
Query: 165 LELLTAYYNQLCFLDARFLTPARSLGLFFHWYD-----SLTG--VPAQQRALAFEKGSVL 217
LE L YY+Q+C ++ +F + L F W D SL G V +L +EK VL
Sbjct: 65 LETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVL 124
Query: 218 FNIGALHTQIGARQDRSCTEGARRAMEAFQRAAGAFSLLREN----FSHAPSPDMSAASL 273
FN AL +QI A Q+ EG + A + +Q A+GAF ++E S P+ D+S ++
Sbjct: 125 FNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTV 184
Query: 274 CALEQLMMAQAQECVF 289
L +M+AQAQE F
Sbjct: 185 GTLSLIMLAQAQEVFF 200
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 56.6 bits (135), Expect = 7e-08
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
V + +G FG TLRG PV I +V+PGS A A LK GD I+ +NG R H +VV+
Sbjct: 280 VRVYKGNKSFGFTLRGHGPVWIESVLPGSPADNAALKSGDRILFLNGLDMRNCSHDKVVS 339
Query: 574 ELKAAGEAGASLQVVSLLP 592
L+ +G + L+P
Sbjct: 340 MLQGSGAMPTLVVEEGLVP 358
Score = 37.0 bits (84), Expect = 0.059
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 523 FGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKAAGEAG 582
FG L G P + V GS A A GL+ GD I+ V G +V +
Sbjct: 17 FGFRLGGSGPCFVLEVAKGSSAHAGGLRPGDQILEVEGLAVGGLSRERLVRLARRCPRVP 76
Query: 583 ASLQVVSLLPSSRLPSLGDRRP--VLLGPR 610
SL V+ P G P VL PR
Sbjct: 77 PSLGVLPAPDGGPGPGSGPAAPTTVLRAPR 106
>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform
2 [Homo sapiens]
Length = 1562
Score = 55.5 bits (132), Expect = 2e-07
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
V + + + GFG T+ GD VL+ +V PG A AG+KEGD I+ VNG H EVV
Sbjct: 48 VIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVK 107
Query: 574 ELKAAGEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQREHGCKTPASTWASPRP 633
+K+ A +L ++ PSS +G GL + G S SP P
Sbjct: 108 LIKSG--AYVALTLLGSSPSS------------MGISGLQQDPSPAGAPRITSVIPSPPP 153
>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform
1 [Homo sapiens]
Length = 1522
Score = 55.5 bits (132), Expect = 2e-07
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
V + + + GFG T+ GD VL+ +V PG A AG+KEGD I+ VNG H EVV
Sbjct: 48 VIIQKDQHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVK 107
Query: 574 ELKAAGEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQREHGCKTPASTWASPRP 633
+K+ A +L ++ PSS +G GL + G S SP P
Sbjct: 108 LIKSG--AYVALTLLGSSPSS------------MGISGLQQDPSPAGAPRITSVIPSPPP 153
>gi|194018553 solute carrier family 9 isoform 3 regulator 2 isoform
a [Homo sapiens]
Length = 337
Score = 53.1 bits (126), Expect = 8e-07
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 515 HLTRGEGGFGLTLRGDSP---VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEV 571
HL +G G+G L D I +V PGS AA +GL+ D ++ VNGQ RHAEV
Sbjct: 153 HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEV 212
Query: 572 VTELKAAGEAGASLQV 587
V +KA + L V
Sbjct: 213 VASIKAREDEARLLVV 228
Score = 45.8 bits (107), Expect = 1e-04
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 516 LTRGEGGFGLTLRGDSP---VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVV 572
L RGE G+G L G+ I V PGS A AA L+ GD +V VNG H +VV
Sbjct: 14 LVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
Query: 573 TELKA 577
+KA
Sbjct: 74 QRIKA 78
>gi|71897229 solute carrier family 9 isoform 3 regulator 2 isoform b
[Homo sapiens]
Length = 326
Score = 53.1 bits (126), Expect = 8e-07
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 515 HLTRGEGGFGLTLRGDSP---VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEV 571
HL +G G+G L D I +V PGS AA +GL+ D ++ VNGQ RHAEV
Sbjct: 153 HLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEV 212
Query: 572 VTELKAAGEAGASLQV 587
V +KA + L V
Sbjct: 213 VASIKAREDEARLLVV 228
Score = 45.8 bits (107), Expect = 1e-04
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 516 LTRGEGGFGLTLRGDSP---VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVV 572
L RGE G+G L G+ I V PGS A AA L+ GD +V VNG H +VV
Sbjct: 14 LVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVV 73
Query: 573 TELKA 577
+KA
Sbjct: 74 QRIKA 78
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 494 HRLGPLSVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGD 553
+R L ++ R+R + + RG+ GFG T+ DSPV + AV G A AGL++ D
Sbjct: 2 NRFNGLCKVCSERRYR---QITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLD 58
Query: 554 YIVSVNGQPCRWWRHAEVVTELKAA-----------------GEAGASLQVVSLLPSSRL 596
++ +N +P W+ E+ E+++ G G L+ S + L
Sbjct: 59 TVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDL 118
Query: 597 PSLGDRRPVLLGPRGLLRSQREHGCKTPASTWASPRPLLNWSRKAQQGKTGG 648
S ++R R ++ H C + + L W R + K GG
Sbjct: 119 QSPPNKREKNCTHGVQARPEQRHSCHLVCDS-SDGLLLGGWERYTEVAKRGG 169
>gi|7662088 Rho guanine nucleotide exchange factor (GEF) 12 [Homo
sapiens]
Length = 1544
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
V + + + GFGLT+ GD+PV + +V A AG++ GD I+ VNG H EVV
Sbjct: 73 VIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVK 132
Query: 574 ELKAAGEAGASLQ-------VVSLLPSSRLPS-LGDRRPVLLGP 609
+K+ ++Q + L S PS +G P++ P
Sbjct: 133 LIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVIGHMSPIMTSP 176
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
+ + RG+ GFG T+ DSPV + AV G A AGL++ D ++ +N +P W+ E+
Sbjct: 300 ITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAH 359
Query: 574 ELKAA-----------------GEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQ 616
E+++ G G L+ S + L S ++R R +
Sbjct: 360 EIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQSPPNKREKNCTHGVQARPE 419
Query: 617 REHGCKTPASTWASPRPLLNWSRKAQQGKTGG 648
+ H C + + L W R + K GG
Sbjct: 420 QRHSCHLVCDS-SDGLLLGGWERYTEVAKRGG 450
>gi|62865654 regulator of G-protein signalling 3 isoform 3 [Homo
sapiens]
Length = 602
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVT 573
+ + RG+ GFG T+ DSPV + AV G A AGL++ D ++ +N +P W+ E+
Sbjct: 188 ITIPRGKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAH 247
Query: 574 ELKAA-----------------GEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQ 616
E+++ G G L+ S + L S ++R R +
Sbjct: 248 EIRSCPSEIILLVWRMVPQVKPGPDGGVLRRASCKSTHDLQSPPNKREKNCTHGVQARPE 307
Query: 617 REHGCKTPASTWASPRPLLNWSRKAQQGKTGG 648
+ H C + + L W R + K GG
Sbjct: 308 QRHSCHLVCDS-SDGLLLGGWERYTEVAKRGG 338
>gi|153070254 MAGI family member, X-linked isoform b [Homo sapiens]
Length = 262
Score = 50.8 bits (120), Expect = 4e-06
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 514 VHLTRGEGGFGLTL------RGDSPVLIAAVIPGSQAAAAG-LKEGDYIVSVNGQPCRWW 566
V L RG GFGLTL GD+P+ + ++ A G L+ GD ++ +NG+ +
Sbjct: 59 VELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGL 118
Query: 567 RHAEVVTELKAAGEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQREHGCKTPAS 626
HA+ V ++A G L +V P P G R V +G+ RS G + S
Sbjct: 119 THAQAVERIRA---GGPQLHLVIRRPLETHP--GKPRGVGEPRKGVDRSPDPGGPEVTGS 173
Query: 627 TWASPRPLLNWSRKAQQGKTGGCPQP 652
+S + + + KT G P+P
Sbjct: 174 RSSSTSLVQHPPSRTTLKKTRGSPEP 199
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 48.9 bits (115), Expect = 2e-05
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 514 VHLTRGEG-GFGLTLRGDSP----VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRH 568
V+L G+G GLT+RG + + I V PGS+A +GLK GD I+ VNG+ H
Sbjct: 280 VNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH 339
Query: 569 AEVVTELKAAGEAGASLQVVSLLPSSR 595
E V LK++ +++ V LP +R
Sbjct: 340 DEAVRLLKSSRHLILTVKDVGRLPHAR 366
Score = 42.4 bits (98), Expect = 0.001
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 522 GFGLTLRGDSP----VLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKA 577
G G ++RG S + ++ V PGS A GL+ GD I+ VN + HAE V LK
Sbjct: 151 GLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALK- 209
Query: 578 AGEAGASLQVVSLLPSSRLP 597
G+ V+S+ + R+P
Sbjct: 210 ----GSKKLVLSVYSAGRIP 225
>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
sapiens]
Length = 1376
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 511 VGPVHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAE 570
V V + RG G+G TL G +P +++ V+ GS A GL+ GD I++VN + H +
Sbjct: 20 VRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHED 79
Query: 571 VVTELKAAGEAGASLQVV 588
VV K G+ L +V
Sbjct: 80 VV---KLIGKCSGVLHMV 94
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 511 VGPVHLTRGEGGFGLTLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAE 570
V V + RG G+G TL G +P +++ V+ GS A GL+ GD I++VN + H +
Sbjct: 20 VRSVEVARGRAGYGFTLSGQAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHED 79
Query: 571 VVTELKAAGEAGASLQVV 588
VV K G+ L +V
Sbjct: 80 VV---KLIGKCSGVLHMV 94
>gi|4759140 sodium/hydrogen exchanger regulatory factor 1 [Homo
sapiens]
Length = 358
Score = 47.4 bits (111), Expect = 4e-05
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 516 LTRGEGGFGLTLRGDSPVL---IAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVV 572
L +G G+G L G+ L I V PGS A AGL GD +V VNG+ H +VV
Sbjct: 17 LEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVV 76
Query: 573 TELKAAGEAGASLQVVSLLPSSRLPSLG 600
+ ++AA A L VV +L LG
Sbjct: 77 SRIRAALNA-VRLLVVDPETDEQLQKLG 103
Score = 42.7 bits (99), Expect = 0.001
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 516 LTRGEGGFGLTLRGDSPV---LIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVV 572
+ +G G+G L D I +V P S A A+GL+ D IV VNG +H +VV
Sbjct: 157 MKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV 216
Query: 573 TELKAAGE 580
+ ++A G+
Sbjct: 217 SAIRAGGD 224
>gi|153070258 MAGI family member, X-linked isoform a [Homo sapiens]
Length = 334
Score = 46.6 bits (109), Expect = 7e-05
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 514 VHLTRGEGGFGLTL------RGDSPVLIAAVIPGSQAAAAG-LKEGDYIVSVNGQPCRWW 566
V L RG GFGLTL GD+P+ + ++ A G L+ GD ++ +NG+ +
Sbjct: 126 VELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGL 185
Query: 567 RHAEVVTELKAAGEAGASLQVVSLLPSSRLP----SLGDRRPVLLGPRGLLRSQREHGCK 622
HA+ V ++A G L +V P P +G+ R ++ P RS G +
Sbjct: 186 THAQAVERIRA---GGPQLHLVIRRPLETHPGKPRGVGEPRKGVV-PSWPDRSPDPGGPE 241
Query: 623 TPASTWASPRPLLNWSRKAQQGKTGGCPQP 652
S +S + + + KT G P+P
Sbjct: 242 VTGSRSSSTSLVQHPPSRTTLKKTRGSPEP 271
>gi|8922944 lin-7 homolog C [Homo sapiens]
Length = 197
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 514 VHLTRGEGGFGLTLRG----DSPVLIAAVIPGSQAAA-AGLKEGDYIVSVNGQPCRWWRH 568
V L + E G G + G +SP+ I+ +IPG A GLK GD ++SVNG H
Sbjct: 94 VELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIADRHGGLKRGDQLLSVNGVSVEGEHH 153
Query: 569 AEVVTELKAA 578
+ V LKAA
Sbjct: 154 EKAVELLKAA 163
>gi|11545920 lin-7 homolog B [Homo sapiens]
Length = 207
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 514 VHLTRGEGGFGLTLRG----DSPVLIAAVIPGSQAAA-AGLKEGDYIVSVNGQPCRWWRH 568
V L + + G G + G +SP+ I+ VIPG A GLK GD ++SVNG +H
Sbjct: 94 VELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQH 153
Query: 569 AEVVTELKAA 578
+ V LKAA
Sbjct: 154 EKAVELLKAA 163
>gi|223890252 glutamate receptor interacting protein 1 [Homo
sapiens]
Length = 1076
Score = 43.9 bits (102), Expect = 5e-04
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 440 ISQTLQRSLAKYAELDREDDFCEAAEAPDIQPKTHQKPEARMPRLSQGKGPDIFHRLGPL 499
+S Q +A ++ D+ +A ++ H + + + + + ++ + L P+
Sbjct: 80 VSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPV 139
Query: 500 SVFSAKNRWRLVGPVHLTRGEGGFGLTLRGDS--------PVLIAAVIPGSQAAAAG-LK 550
SV + +R V V L + FG +RG + PV+I V PG A G +K
Sbjct: 140 SVQGSSVIFRTV-EVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIK 198
Query: 551 EGDYIVSVNGQPCRWWRHAEVVTELKAAGEAGASL 585
GD ++SV+G HAE ++ LK G+ A L
Sbjct: 199 PGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALL 233
Score = 33.9 bits (76), Expect = 0.50
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 514 VHLTRGEGG-FGLTLRG----DSPVLIAAVIPGSQAAAAG-LKEGDYIVSVNGQPCRWWR 567
V L + EG GLT+ G D ++ + G AA + L GDYI +VNG +R
Sbjct: 54 VELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFR 113
Query: 568 HAEVVTELKAAGE 580
H E+++ LK GE
Sbjct: 114 HDEIISLLKNVGE 126
>gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]
Length = 330
Score = 43.9 bits (102), Expect = 5e-04
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 519 GEGGFGLTLRG----DSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTE 574
G G +G L+G + P+ I+ + PGS+AA + L +GD +V+++G H E +
Sbjct: 9 GPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNK 68
Query: 575 LKAAGEAGASLQVVSLLPSSRLP-SLGDRRPVLLGPRGLLRSQREHGCKTPASTWA-SPR 632
+K+ AS + L S+ P + P + P ++ Q++ T S A SP
Sbjct: 69 IKS-----ASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSLVAPSPS 123
Query: 633 PLLNWSRKAQQGKTGGCPQPCAPVKPA 659
P +A G T G P+ PA
Sbjct: 124 P----EARASPG-TPGTPELRPTFSPA 145
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 43.9 bits (102), Expect = 5e-04
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 519 GEGGFGLTLRG----DSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTE 574
G G +G L+G + P+ I+ + PGS+AA + L +GD +V+++G H E +
Sbjct: 9 GPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNK 68
Query: 575 LKAAGEAGASLQVVSLLPSSRLP-SLGDRRPVLLGPRGLLRSQREHGCKTPASTWA-SPR 632
+K+ AS + L S+ P + P + P ++ Q++ T S A SP
Sbjct: 69 IKS-----ASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSLVAPSPS 123
Query: 633 PLLNWSRKAQQGKTGGCPQPCAPVKPA 659
P +A G T G P+ PA
Sbjct: 124 P----EARASPG-TPGTPELRPTFSPA 145
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 43.9 bits (102), Expect = 5e-04
Identities = 30/59 (50%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 521 GGFGLTLRGDSPVLIAAV-IPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKAA 578
GG G L GD PV IA + G A LK GD IVS+NGQP HA+VV LK A
Sbjct: 1693 GGRGSPL-GDIPVFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNA 1750
Score = 35.4 bits (80), Expect = 0.17
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 513 PVHLTRGEG-GFGLTL---RGDSPVLIAAVIPGSQAAAAG-LKEGDYIVSVNGQPCRWWR 567
PV L + G G GL++ R S V I+ ++ G A G L +GD I+SVNG+ R
Sbjct: 1533 PVDLQKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNAS 1592
Query: 568 HAEVVTELKAA 578
V T LK A
Sbjct: 1593 QETVATILKCA 1603
Score = 34.7 bits (78), Expect = 0.29
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 514 VHLTRGEGGFGLTLRGDSPVLIAAVI------PGSQAAAAGLKEGDYIVSVNGQPCRWWR 567
+ +++G G GL++ G + A++ G+ A L GD I+ VNG R
Sbjct: 1438 IEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSS 1497
Query: 568 HAEVVTELK 576
H E +T L+
Sbjct: 1498 HEEAITALR 1506
Score = 31.2 bits (69), Expect = 3.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 508 WRLVGPVHLTR-GEG-GFGLTLRGDSPVLIAAVIPGSQAAAAG-LKEGDYIVSVNGQPCR 564
W V V L G G GFG+ S V++ ++PG A G L+ GD+I+ + G +
Sbjct: 243 WGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQ 302
Query: 565 WWRHAEVVTELKAAGEA 581
+V L+ G +
Sbjct: 303 GMTSEQVAQVLRNCGNS 319
>gi|4759306 lin-7 homolog A [Homo sapiens]
Length = 233
Score = 43.9 bits (102), Expect = 5e-04
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 514 VHLTRGEGGFGLTLRG----DSPVLIAAVIPGSQAAA-AGLKEGDYIVSVNGQPCRWWRH 568
V L + + G G + G +SP+ I+ +IPG A GLK GD ++SVNG H
Sbjct: 109 VELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHH 168
Query: 569 AEVVTELKAAGEA 581
+ V LKAA ++
Sbjct: 169 EKAVELLKAAKDS 181
>gi|21361142 PDZ domain containing 1 [Homo sapiens]
Length = 519
Score = 43.1 bits (100), Expect = 8e-04
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 514 VHLTRGEGGFGLTLRGDSPV---LIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAE 570
V + +G G+G LR S +I + GS A AGLK D +V+VNG+ H
Sbjct: 244 VEMKKGSNGYGFYLRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDS 303
Query: 571 VVTELKAAGEAGASLQV 587
VV ++ G+ + L V
Sbjct: 304 VVEMIRKGGDQTSLLVV 320
Score = 37.4 bits (85), Expect = 0.045
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 519 GEGGFGL-TLRGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTELKA 577
G GF L T++G V + + P A AG+ D+++ VNG+ H EVV ++K
Sbjct: 143 GSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK 202
Query: 578 AG 579
+G
Sbjct: 203 SG 204
Score = 34.7 bits (78), Expect = 0.29
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 516 LTRGEGGFGLTL---RGDSPVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVV 572
L +GE G+G L RG I V G A AGL++ D I+ VNG + +VV
Sbjct: 381 LAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVV 440
Query: 573 TELKAAGE 580
++++G+
Sbjct: 441 DRIQSSGK 448
Score = 30.4 bits (67), Expect = 5.5
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 516 LTRGEG---GFGLTLRGDSPV-LIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEV 571
L++ EG GF L + D+ L+ V S A AGL++GD ++ +NG H +V
Sbjct: 12 LSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQV 71
Query: 572 VTELKAAGEAGASLQVVSLLPSSRLPSLGDRRPVLLGPRGLLRSQREHGCKT-------- 623
V ++ ++G S+ ++ L S ++ R + + L +SQ+E G
Sbjct: 72 VDLVR---KSGNSVTLLVLDGDSYEKAVKTR----VDLKELGQSQKEQGLSDNILSPVMN 124
Query: 624 -PASTWASPR--------PLLNWSRKAQQGKTG 647
TW PR +S K QGK G
Sbjct: 125 GGVQTWTQPRLCYLVKEGGSYGFSLKTVQGKKG 157
>gi|193083191 synaptopodin 2 isoform c [Homo sapiens]
Length = 1109
Score = 43.1 bits (100), Expect = 8e-04
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 519 GEGGFGLTLRGDS----PVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTE 574
G +G L+G P+ +A + S+A+ +GL EGD +VS+NG PC + EV+
Sbjct: 13 GGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNPCADLTYPEVIKL 72
Query: 575 LKAAGEAGASLQVVSLLPSS 594
+++ + SLQ++ PSS
Sbjct: 73 MESITD---SLQMLIKRPSS 89
>gi|193083185 synaptopodin 2 isoform b [Homo sapiens]
Length = 1093
Score = 43.1 bits (100), Expect = 8e-04
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 519 GEGGFGLTLRGDS----PVLIAAVIPGSQAAAAGLKEGDYIVSVNGQPCRWWRHAEVVTE 574
G +G L+G P+ +A + S+A+ +GL EGD +VS+NG PC + EV+
Sbjct: 13 GGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNPCADLTYPEVIKL 72
Query: 575 LKAAGEAGASLQVVSLLPSS 594
+++ + SLQ++ PSS
Sbjct: 73 MESITD---SLQMLIKRPSS 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,359,573
Number of Sequences: 37866
Number of extensions: 1413565
Number of successful extensions: 5600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 5330
Number of HSP's gapped (non-prelim): 328
length of query: 670
length of database: 18,247,518
effective HSP length: 109
effective length of query: 561
effective length of database: 14,120,124
effective search space: 7921389564
effective search space used: 7921389564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.