Guide to the Human Genome
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Name: RHPN1 Sequence: fasta or formatted (670aa) NCBI GI: 119120915
Description:

rhophilin 1

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         74           4
 C cysteine            2.1         14           1
 D aspartate           3.3         22           2
 E glutamate           7.9         53           2
 F phenylalanine       2.5         17           2
 G glycine             7.5         50           2
 H histidine           3.0         20           1
 I isoleucine          2.4         16           1
 K lysine              3.3         22           1
 L leucine            12.4         83           2
 M methionine          1.8         12           2
 N asparagine          1.8         12           2
 P proline             7.3         49           2
 Q glutamine           6.3         42           2
 R arginine            7.9         53           2
 S serine              7.2         48           2
 T threonine           3.9         26           1
 V valine              5.4         36           2
 W tryptophan          1.3          9           2
 Y tyrosine            1.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   rhophilin 1 
RHPN2                 0.347   rhophilin, Rho GTPase binding protein 2 
PTPN23                0.082   protein tyrosine phosphatase, non-receptor type 23 [...
PDCD6IP               0.054   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.054   programmed cell death 6 interacting protein isoform ...
GRID2IP               0.024   glutamate receptor, ionotropic, delta 2 (Grid2) int...
ARHGEF11              0.023   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.023   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
SLC9A3R2              0.021   solute carrier family 9 isoform 3 regulator 2 isofo...
SLC9A3R2              0.021   solute carrier family 9 isoform 3 regulator 2 isofor...
RGS3                  0.020   regulator of G-protein signalling 3 isoform 1 
ARHGEF12              0.020   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
RGS3                  0.020   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.020   regulator of G-protein signalling 3 isoform 3 
MAGIX                 0.020   MAGI family member, X-linked isoform b 
DFNB31                0.018   CASK-interacting protein CIP98 isoform 1 
RGS12                 0.018   regulator of G-protein signalling 12 isoform 2 
RGS12                 0.018   regulator of G-protein signalling 12 isoform 1 [Homo...
SLC9A3R1              0.017   sodium/hydrogen exchanger regulatory factor 1 
MAGIX                 0.017   MAGI family member, X-linked isoform a 
LIN7C                 0.014   lin-7 homolog C 
LIN7B                 0.014   lin-7 homolog B 
GRIP1                 0.014   glutamate receptor interacting protein 1 
LDB3                  0.014   LIM domain binding 3 isoform 3 
LDB3                  0.014   LIM domain binding 3 isoform 1 
INADL                 0.014   InaD-like 
LIN7A                 0.014   lin-7 homolog A 
PDZK1                 0.014   PDZ domain containing 1 
SYNPO2                0.014   synaptopodin 2 isoform c 
SYNPO2                0.014   synaptopodin 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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