Search of human proteins with 239754259

Search of human proteins with 239754259

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754259 PREDICTED: hypothetical protein XP_002345937 [Homo
sapiens]
         (105 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754259 PREDICTED: hypothetical protein XP_002345937 [Homo ...   213   3e-56
gi|239748797 PREDICTED: hypothetical protein XP_002346805 [Homo ...   213   3e-56
gi|239742834 PREDICTED: hypothetical protein XP_002342675 [Homo ...   213   3e-56
gi|239757367 PREDICTED: hypothetical protein [Homo sapiens]            67   4e-12
gi|239751919 PREDICTED: hypothetical protein XP_002348040 [Homo ...    67   4e-12
gi|239746409 PREDICTED: hypothetical protein XP_002343743 [Homo ...    67   4e-12
gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]       65   1e-11
gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo ...    65   1e-11
gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo ...    65   1e-11
gi|58530857 homocysteine-inducible, endoplasmic reticulum stress...    28   1.5  
gi|4504095 motilin receptor [Homo sapiens]                             28   2.0  
gi|239755109 PREDICTED: hypothetical protein XP_002346219 [Homo ...    27   3.4  
gi|239749625 PREDICTED: hypothetical protein XP_002347104 [Homo ...    27   3.4  
gi|239743897 PREDICTED: hypothetical protein XP_002342987 [Homo ...    27   3.4  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    27   4.5  
gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens]         27   4.5  
gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens]         27   4.5  
gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens]          27   4.5  
gi|239745863 PREDICTED: hypothetical protein [Homo sapiens]            26   5.9  
gi|239740965 PREDICTED: hypothetical protein XP_002344115 [Homo ...    26   5.9  
gi|4503231 cytochrome P450, family 3, subfamily A, polypeptide 5...    26   7.7  
gi|126032348 hect domain and RLD 2 [Homo sapiens]                      26   7.7  
gi|7661870 homocysteine-inducible, endoplasmic reticulum stress-...    26   7.7  
gi|148762978 similar to CG15216-PA [Homo sapiens]                      26   7.7  

>gi|239754259 PREDICTED: hypothetical protein XP_002345937 [Homo
           sapiens]
          Length = 105

 Score =  213 bits (541), Expect = 3e-56
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105
           SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT
Sbjct: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105


>gi|239748797 PREDICTED: hypothetical protein XP_002346805 [Homo
           sapiens]
          Length = 105

 Score =  213 bits (541), Expect = 3e-56
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105
           SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT
Sbjct: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105


>gi|239742834 PREDICTED: hypothetical protein XP_002342675 [Homo
           sapiens]
          Length = 105

 Score =  213 bits (541), Expect = 3e-56
 Identities = 105/105 (100%), Positives = 105/105 (100%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA
Sbjct: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60

Query: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105
           SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT
Sbjct: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQGCAFT 105


>gi|239757367 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 37/69 (53%), Positives = 44/69 (63%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +L  HP   + RQD QELLQHQQLQ LLL   LR QPL+A+L +P Q L G  SL V + 
Sbjct: 47  VLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQLMQPGQGLVGPGSLLVDKF 106

Query: 61  SEALAGALR 69
            E  AG L+
Sbjct: 107 PETQAGELQ 115


>gi|239751919 PREDICTED: hypothetical protein XP_002348040 [Homo
           sapiens]
          Length = 134

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 37/69 (53%), Positives = 44/69 (63%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +L  HP   + RQD QELLQHQQLQ LLL   LR QPL+A+L +P Q L G  SL V + 
Sbjct: 47  VLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQLMQPGQGLVGPGSLLVDKF 106

Query: 61  SEALAGALR 69
            E  AG L+
Sbjct: 107 PETQAGELQ 115


>gi|239746409 PREDICTED: hypothetical protein XP_002343743 [Homo
           sapiens]
          Length = 134

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 37/69 (53%), Positives = 44/69 (63%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +L  HP   + RQD QELLQHQQLQ LLL   LR QPL+A+L +P Q L G  SL V + 
Sbjct: 47  VLCHHPGPDLIRQDAQELLQHQQLQHLLLGARLRHQPLAAQLMQPGQGLVGPGSLLVDKF 106

Query: 61  SEALAGALR 69
            E  AG L+
Sbjct: 107 PETQAGELQ 115


>gi|239756458 PREDICTED: similar to ZNF668 protein [Homo sapiens]
          Length = 377

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 224 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 283

Query: 61  SEALA 65
            EALA
Sbjct: 284 PEALA 288


>gi|239750986 PREDICTED: hypothetical protein XP_002347637 [Homo
           sapiens]
          Length = 377

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 224 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 283

Query: 61  SEALA 65
            EALA
Sbjct: 284 PEALA 288


>gi|239745391 PREDICTED: hypothetical protein XP_002343487 [Homo
           sapiens]
          Length = 417

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 1   MLLPHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEA 60
           +LL HPAL +P Q  QELLQHQQLQDLLL   L  QP +AEL E  + L     + VAE 
Sbjct: 264 VLLTHPALDLPWQHCQELLQHQQLQDLLLGTQLGPQPAAAELPELAEGLMRPMHIPVAEL 323

Query: 61  SEALA 65
            EALA
Sbjct: 324 PEALA 328


>gi|58530857 homocysteine-inducible, endoplasmic reticulum
           stress-inducible, ubiquitin-like domain member 1 isoform
           2 [Homo sapiens]
          Length = 390

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 4   PHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEASEA 63
           P P  Q     G+ LL HQ L+DLL      +  L   +  P++      + +VAE++E 
Sbjct: 49  PRPEDQRLIYSGKLLLDHQCLRDLLPKEKRHVLHLVCNVKSPSK--MPEINAKVAESTEE 106

Query: 64  LAGALRTQ 71
            AG+ R Q
Sbjct: 107 PAGSNRGQ 114


>gi|4504095 motilin receptor [Homo sapiens]
          Length = 412

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 43  SEPTQRLAGACSLRVAEASEALAGALRTQIWATGKTGFFFL 83
           S P    A A   R    S A  GALR  +W T  T +FFL
Sbjct: 220 SGPETAEAAALFSRECRPSPAQLGALRVMLWVT--TAYFFL 258


>gi|239755109 PREDICTED: hypothetical protein XP_002346219 [Homo
          sapiens]
          Length = 115

 Score = 26.9 bits (58), Expect = 3.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 13 QDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLA 50
          Q+ QELL   Q+ DLLL  H  L   + E   P Q LA
Sbjct: 45 QEDQELLLAMQILDLLLFAHFCLFSEALERRFPPQILA 82


>gi|239749625 PREDICTED: hypothetical protein XP_002347104 [Homo
          sapiens]
          Length = 95

 Score = 26.9 bits (58), Expect = 3.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 13 QDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLA 50
          Q+ QELL   Q+ DLLL  H  L   + E   P Q LA
Sbjct: 25 QEDQELLLAMQILDLLLFAHFCLFSEALERRFPPQILA 62


>gi|239743897 PREDICTED: hypothetical protein XP_002342987 [Homo
          sapiens]
          Length = 95

 Score = 26.9 bits (58), Expect = 3.4
 Identities = 17/38 (44%), Positives = 20/38 (52%)

Query: 13 QDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLA 50
          Q+ QELL   Q+ DLLL  H  L   + E   P Q LA
Sbjct: 25 QEDQELLLAMQILDLLLFAHFCLFSEALERRFPPQILA 62


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 26   DLLLAVHL-RLQPLSAELSEPTQRLAGACSLRVAEASEALAGALRTQIWATGKTGFFFL 83
            +LL  V L   Q LS E   P+ +          E  E      +T IWA G T F  L
Sbjct: 7803 NLLKVVDLGNAQSLSQEKVLPSDKFKDYLETMAPELLEGQGAVPQTDIWAIGVTAFIML 7861


>gi|194294510 kinesin family member C3 isoform 2 [Homo sapiens]
          Length = 826

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 19  LQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEASEALAGALRTQ 71
           L+ QQ  D L  V LRL+   AE ++  +RL    S R+ ++ E +A +LR Q
Sbjct: 203 LEVQQKTDRLAEVELRLKDCLAEKAQEEERL----SRRLRDSHETIA-SLRAQ 250


>gi|194294508 kinesin family member C3 isoform 3 [Homo sapiens]
          Length = 687

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 19  LQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEASEALAGALRTQ 71
           L+ QQ  D L  V LRL+   AE ++  +RL    S R+ ++ E +A +LR Q
Sbjct: 64  LEVQQKTDRLAEVELRLKDCLAEKAQEEERL----SRRLRDSHETIA-SLRAQ 111


>gi|94536858 kinesin family member C3 isoform 1 [Homo sapiens]
          Length = 833

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 19  LQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEASEALAGALRTQ 71
           L+ QQ  D L  V LRL+   AE ++  +RL    S R+ ++ E +A +LR Q
Sbjct: 203 LEVQQKTDRLAEVELRLKDCLAEKAQEEERL----SRRLRDSHETIA-SLRAQ 250


>gi|239745863 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 208

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 4   PHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAE---A 60
           PHP    P  DG    +       L   H+ +  L A L  P   L    +L+ A     
Sbjct: 107 PHP----PNLDGP---RRANRNTFLWTCHVGIPDLPA-LPAPASFLGTQLTLKKASDGPR 158

Query: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQ 100
           +E +   L    W TG+   F LHL  Q+  L  C  G +
Sbjct: 159 TEKVTQDLAQPFWTTGRQLRFVLHLSLQQKDLSKCWRGAE 198


>gi|239740965 PREDICTED: hypothetical protein XP_002344115 [Homo
           sapiens]
          Length = 166

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 4   PHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAE---A 60
           PHP    P  DG    +       L   H+ +  L A L  P   L    +L+ A     
Sbjct: 65  PHP----PNLDGP---RRANRNTFLWTCHVGIPDLPA-LPAPASFLGTQLTLKKASDGPR 116

Query: 61  SEALAGALRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQ 100
           +E +   L    W TG+   F LHL  Q+  L  C  G +
Sbjct: 117 TEKVTQDLAQPFWTTGRQLRFVLHLSLQQKDLSKCWRGAE 156


>gi|4503231 cytochrome P450, family 3, subfamily A, polypeptide 5
           [Homo sapiens]
          Length = 502

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 68  LRTQIWATGKTGFFFLHLYDQKLHLVFCRLGIQG 101
           L  + W         L+LY  + H +F RLGI G
Sbjct: 7   LAVETWLLLAVSLVLLYLYGTRTHGLFKRLGIPG 40


>gi|126032348 hect domain and RLD 2 [Homo sapiens]
          Length = 4834

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 27   LLLAVHLRL-QPLSAELSEPTQRLAGACSLRVAEASE 62
            +LL + +R   PLS  L+EP  +     SL +A+ SE
Sbjct: 4538 VLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSE 4574


>gi|7661870 homocysteine-inducible, endoplasmic reticulum
           stress-inducible, ubiquitin-like domain member 1 isoform
           1 [Homo sapiens]
          Length = 391

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 4   PHPALQIPRQDGQELLQHQQLQDLLLAVHLR-LQPLSAELSEPTQRLAGACSLRVAEASE 62
           P P  Q     G+ LL HQ L+DLL     R +  L   +  P++      + +VAE++E
Sbjct: 49  PRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSK--MPEINAKVAESTE 106

Query: 63  ALAGALRTQ 71
             AG+ R Q
Sbjct: 107 EPAGSNRGQ 115


>gi|148762978 similar to CG15216-PA [Homo sapiens]
          Length = 976

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 4   PHPALQIPRQDGQELLQHQQLQDLLLAVHLRLQPLSAELSEPTQRLAGACSLRVAEASEA 63
           PH A   P    Q  L+  QL +L+  + +  +P + + SEP     G    R+ ++  A
Sbjct: 562 PHAAPDGPTSGRQRSLE--QLDELITDLVIDSRPTAGQASEPAADCLGPQLRRLLDSRPA 619

Query: 64  LAGA 67
            +GA
Sbjct: 620 GSGA 623


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,908,320
Number of Sequences: 37866
Number of extensions: 133936
Number of successful extensions: 628
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 24
length of query: 105
length of database: 18,247,518
effective HSP length: 76
effective length of query: 29
effective length of database: 15,369,702
effective search space: 445721358
effective search space used: 445721358
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.