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Search of human proteins with 239754211
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo
sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo ... 280 2e-76
gi|239748738 PREDICTED: hypothetical protein XP_002346786 [Homo ... 154 1e-38
gi|239742785 PREDICTED: hypothetical protein XP_002342651 [Homo ... 154 1e-38
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 47 6e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 5e-05
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 43 8e-05
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 42 1e-04
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 42 1e-04
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 42 2e-04
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 41 2e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 41 3e-04
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 41 3e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 41 3e-04
gi|11415052 retinoid X receptor, beta [Homo sapiens] 40 5e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 40 5e-04
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 40 5e-04
gi|148613878 acrosin precursor [Homo sapiens] 40 7e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 39 0.001
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 39 0.001
gi|153792074 proline rich 12 [Homo sapiens] 39 0.001
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 39 0.002
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 39 0.002
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 39 0.002
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 39 0.002
gi|15029506 homeobox D8 [Homo sapiens] 38 0.002
gi|116284392 mucin 2 precursor [Homo sapiens] 38 0.002
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 38 0.002
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 38 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.002
>gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo
sapiens]
Length = 131
Score = 280 bits (716), Expect = 2e-76
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR
Sbjct: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
Query: 61 VAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSAR 120
VAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSAR
Sbjct: 61 VAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSAR 120
Query: 121 GFAVLEPPAPA 131
GFAVLEPPAPA
Sbjct: 121 GFAVLEPPAPA 131
>gi|239748738 PREDICTED: hypothetical protein XP_002346786 [Homo
sapiens]
Length = 121
Score = 154 bits (390), Expect = 1e-38
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR
Sbjct: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
Query: 61 VAAGSAHALRPSA 73
VAAGSAHALRPSA
Sbjct: 61 VAAGSAHALRPSA 73
>gi|239742785 PREDICTED: hypothetical protein XP_002342651 [Homo
sapiens]
Length = 121
Score = 154 bits (390), Expect = 1e-38
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR
Sbjct: 1 MQLNAIHSHFGRGYRGGRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGR 60
Query: 61 VAAGSAHALRPSA 73
VAAGSAHALRPSA
Sbjct: 61 VAAGSAHALRPSA 73
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 46.6 bits (109), Expect = 6e-06
Identities = 36/99 (36%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 21 PNAAAGPARGTWIP---------GFSAERSSRRRNTPR--PPSTATMVTGRVAAGSAHAL 69
P+ AAG RG W G +A R R+R R P S A GR A L
Sbjct: 74 PSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAPGR----DALRL 129
Query: 70 RPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
P P P P P+ P APPS PAP+ RPA
Sbjct: 130 PPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAPRSRPA 168
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.5 bits (101), Expect = 5e-05
Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 48 PRPPSTATMV-----TGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPA 102
P+P + T++ G A + A P A P P P A P PP +P A P PA
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA 288
Query: 103 PKPRPAGCFPMGDRNSARGFAVLEP-PAPA 131
P A P G A P PAPA
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPA 318
Score = 33.5 bits (75), Expect = 0.049
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 17 GRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPG 76
G H + + A G G +A P PP GR G RP G
Sbjct: 59 GNHVVSGSPAGAAGA---GPAAPAEGAPGAAPEPPPA-----GRARPGGGGPQRP----G 106
Query: 77 PLCPEATPSAPPTSPLHPAPPSA--RPAPKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P P P PAPP+A RP P+ C P+ +A A PAPA
Sbjct: 107 PPSPRR-----PLVPAGPAPPAAKLRPPPEGSAGSCAPV---PAAAAVAAGPEPAPA 155
Score = 30.0 bits (66), Expect = 0.54
Identities = 29/94 (30%), Positives = 34/94 (36%), Gaps = 13/94 (13%)
Query: 17 GRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPG 76
GR P GP R PG + R P PP+ +AGS + VP
Sbjct: 93 GRARPGGG-GPQR----PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSC-----APVPA 142
Query: 77 PLCPEATPSAPPTSPLHPAPP---SARPAPKPRP 107
A P P P PA P +AR P P P
Sbjct: 143 AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Score = 30.0 bits (66), Expect = 0.54
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 22/97 (22%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAV------PGPLCPEATPSAPPTSPLHP------A 95
P P A + G A ++H AV P L P P+AP T P A
Sbjct: 189 PAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAA 248
Query: 96 PPS-ARPAPKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
PP+ A P+P PA P A PP PA
Sbjct: 249 PPAPAAPSPPAAPAPAAPA---------AAPPPPPPA 276
Score = 28.1 bits (61), Expect = 2.1
Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 22/92 (23%)
Query: 23 AAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEA 82
AAA PA PG AE S +R PP+ T+ A+ +A S V GP A
Sbjct: 334 AAAAPA-----PGVKAE-SPKRVVQAAPPAAQTLAASGPASTAA-----SMVIGPTMQGA 382
Query: 83 TPSAPPTSPLHPAPPSARPAPKPRPAGCFPMG 114
PS P+A P P P P G
Sbjct: 383 LPS-----------PAAVPPPAPGTPTGLPKG 403
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 42.7 bits (99), Expect = 8e-05
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEAT-PSAPPTSPLHPAPP-----SARP 101
P PP+ A+ + V G A + P G L P+A P+ P HP P + RP
Sbjct: 783 PAPPTKASALP--VEQGPAEPIPPGVASGGLRPDALGPTTAHHGPRHPPKPPRSKATERP 840
Query: 102 APKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
+P G P G+R+ +V E P PA
Sbjct: 841 GQEPEGPGATPAGERDDQSPDSVPERPRPA 870
Score = 31.6 bits (70), Expect = 0.19
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 38 AERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSA-VPGPLCPEATPSAPPTSPLHPAP 96
A+ S R R ++ AGS P VPGP P+ P + +
Sbjct: 696 AQEESEERGGQREGEGEEKLSLEAHAGSPSLKTPDGPVPGP-GPQGAAPEPLGASVQRDS 754
Query: 97 PSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
RP P P+ P G ++A G V PP A
Sbjct: 755 AQGRPCPPPQAPANQPEGASSAAPGSPVPAPPTKA 789
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P AGPA+ + + RRR T R P T AG H+ RP
Sbjct: 63 PPTRAGPAQRS---SCTQPHRRRRRGTRRLPPALT------PAGPYHSARPGGGARARAA 113
Query: 81 EATPSAPPTSPLHPAPPSARPAPKPR 106
+P PP S L PA PS PAP R
Sbjct: 114 RVSPPTPPRSGLDPAVPSPTPAPLAR 139
Score = 26.6 bits (57), Expect = 6.0
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 59 GRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR-PAGCFPMGDRN 117
G A A ALR +A PGPL T + P P R R P P G +
Sbjct: 41 GDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYH 100
Query: 118 SAR-------GFAVLEPPAP 130
SAR A + PP P
Sbjct: 101 SARPGGGARARAARVSPPTP 120
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P AGPA+ + + RRR T R P T AG H+ RP
Sbjct: 63 PPTRAGPAQRS---SCTQPHRRRRRGTRRLPPALT------PAGPYHSARPGGGARARAA 113
Query: 81 EATPSAPPTSPLHPAPPSARPAPKPR 106
+P PP S L PA PS PAP R
Sbjct: 114 RVSPPTPPRSGLDPAVPSPTPAPLAR 139
Score = 26.6 bits (57), Expect = 6.0
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 59 GRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR-PAGCFPMGDRN 117
G A A ALR +A PGPL T + P P R R P P G +
Sbjct: 41 GDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYH 100
Query: 118 SAR-------GFAVLEPPAP 130
SAR A + PP P
Sbjct: 101 SARPGGGARARAARVSPPTP 120
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 41.6 bits (96), Expect = 2e-04
Identities = 38/120 (31%), Positives = 45/120 (37%), Gaps = 19/120 (15%)
Query: 13 GYRGGRHYPNAAAGP----ARGTWIPGFSAERSSRRRNT-----PRPPSTATMVTGRVAA 63
G R G P AG R + +PG SA++ R + PP+
Sbjct: 46 GRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTAPPAPPRQCLPTPCP 105
Query: 64 GSAHALRPSAVPGPLCPEATPSAPPTSP--LHPAPPSARPAPKPRPAGCFPMGDRNSARG 121
H LRP PG TP PP P L P P PAP P PA P G + RG
Sbjct: 106 PLGHGLRPRPPPG------TP--PPRCPRTLAPGPRGLFPAPPPAPARTGPAGKAAADRG 157
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 41.2 bits (95), Expect = 2e-04
Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 12 RGYRGGRHYPNAAAGP-ARGTWIPGFSAERSSRRR------NTPRPPSTATMVTGRVAAG 64
R +R GR A GP A G P + SS R + ST + ++ AA
Sbjct: 26 RLFRSGRAGGGGAGGPGASGPAAPSSPSSPSSARSVGSFMSRVLKTLSTLSHLSSEGAAP 85
Query: 65 SAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
LR PGP P PP P PAPP+ P P AG
Sbjct: 86 DRGGLRSCFPPGPAAAPTPPPCPPP-PASPAPPACAAEPVPGVAG 129
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 3e-04
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH-PAPPSARPAPK- 104
TP PPS++ AA + A P P T +APPT P PAPPS+ P+
Sbjct: 176 TPAPPSSSAPPE-TTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET 234
Query: 105 ----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P+ P +SA PP P+
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPTPS 265
Score = 36.6 bits (83), Expect = 0.006
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 51 PSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK----- 104
P AT ++ R ++ ++ A P+ T +APPT S PAPPS+ P+
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 105 PRPAGCFPMGDRNSARGFAVLEPPAP 130
P P+ +SA PP P
Sbjct: 193 PTPSATTQAPPSSSAPPETTAAPPTP 218
Score = 35.0 bits (79), Expect = 0.017
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P +++ P T P + + ++ PP T T SA L PS+ P P
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPET----TAVPPTPSATTLDPSSASAP--P 278
Query: 81 EATPSAPPT-SPLHPAPPSARPAPKPRPAGCFPMGDRNSA 119
E T +APPT S PAPPS +P P+ P+ NS+
Sbjct: 279 ETT-AAPPTPSATTPAPPS---SPAPQETTAAPITTPNSS 314
Score = 34.3 bits (77), Expect = 0.029
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 46 NTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK 104
N+P P T AA + A P P T +APPT S APPS+ P+
Sbjct: 158 NSPAPQDTT-------AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPE 210
Query: 105 -----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P P +SA PP P+
Sbjct: 211 TTAAPPTPPATTPAPPSSSAPPETTAAPPTPS 242
Score = 31.2 bits (69), Expect = 0.24
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P S+ P P +T A A+ P+ L P + +
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Query: 87 PPTSPLHPAPPSARPAPKPRPA 108
P T+ P P + PAP PA
Sbjct: 278 PETTAAPPTPSATTPAPPSSPA 299
Score = 30.4 bits (67), Expect = 0.41
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH 93
P +A + T PPS++ A + A P+ PE T + P S
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 94 PAPPSARPAPK-----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
PAP S+ P+ P P+ SA PP P+
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPS 288
Score = 28.9 bits (63), Expect = 1.2
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAA--GSAHALRPSAVPGPL 78
P+++A P P SA + ++ P +TA T S+ + P P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 79 CPEATPSAPPTSPLHP---APPSARPAPKP 105
P AT APP+SP A P P P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNSSP 315
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 40.8 bits (94), Expect = 3e-04
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 23 AAAGPARGTWIPGFSAERSSRRRNTPRPPSTATM-VTGRVAAGSAHALRPSA---VPGPL 78
AAAG W+P + R P P + V AA S RP + PG
Sbjct: 87 AAAGTVGPRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSRARSRPESSPGAPGSS 146
Query: 79 CPEATPSAPPTSPLHPAPPSARP---APKPRP 107
P PS PP + P P SARP P+P+P
Sbjct: 147 VPALLPSLPPLAA--PRPLSARPRLRPPQPQP 176
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 3e-04
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH-PAPPSARPAPK- 104
TP PPS++ AA + A P P T +APPT P PAPPS+ P+
Sbjct: 176 TPAPPSSSAPPE-TTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET 234
Query: 105 ----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P+ P +SA PP P+
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPTPS 265
Score = 36.6 bits (83), Expect = 0.006
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 51 PSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK----- 104
P AT ++ R ++ ++ A P+ T +APPT S PAPPS+ P+
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 105 PRPAGCFPMGDRNSARGFAVLEPPAP 130
P P+ +SA PP P
Sbjct: 193 PTPSATTQAPPSSSAPPETTAAPPTP 218
Score = 35.0 bits (79), Expect = 0.017
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P +++ P T P + + ++ PP T T SA L PS+ P P
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPET----TAVPPTPSATTLDPSSASAP--P 278
Query: 81 EATPSAPPT-SPLHPAPPSARPAPKPRPAGCFPMGDRNSA 119
E T +APPT S PAPPS +P P+ P+ NS+
Sbjct: 279 ETT-AAPPTPSATTPAPPS---SPAPQETTAAPITTPNSS 314
Score = 34.3 bits (77), Expect = 0.029
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 46 NTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK 104
N+P P T AA + A P P T +APPT S APPS+ P+
Sbjct: 158 NSPAPQDTT-------AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPE 210
Query: 105 -----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P P +SA PP P+
Sbjct: 211 TTAAPPTPPATTPAPPSSSAPPETTAAPPTPS 242
Score = 31.2 bits (69), Expect = 0.24
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P S+ P P +T A A+ P+ L P + +
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Query: 87 PPTSPLHPAPPSARPAPKPRPA 108
P T+ P P + PAP PA
Sbjct: 278 PETTAAPPTPSATTPAPPSSPA 299
Score = 30.4 bits (67), Expect = 0.41
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH 93
P +A + T PPS++ A + A P+ PE T + P S
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 94 PAPPSARPAPK-----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
PAP S+ P+ P P+ SA PP P+
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPS 288
Score = 28.9 bits (63), Expect = 1.2
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAA--GSAHALRPSAVPGPL 78
P+++A P P SA + ++ P +TA T S+ + P P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 79 CPEATPSAPPTSPLHP---APPSARPAPKP 105
P AT APP+SP A P P P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNSSP 315
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 3e-04
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH-PAPPSARPAPK- 104
TP PPS++ AA + A P P T +APPT P PAPPS+ P+
Sbjct: 176 TPAPPSSSAPPE-TTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPET 234
Query: 105 ----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P+ P +SA PP P+
Sbjct: 235 TAAPPTPSATTPAPLSSSAPPETTAVPPTPS 265
Score = 36.6 bits (83), Expect = 0.006
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 51 PSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK----- 104
P AT ++ R ++ ++ A P+ T +APPT S PAPPS+ P+
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 105 PRPAGCFPMGDRNSARGFAVLEPPAP 130
P P+ +SA PP P
Sbjct: 193 PTPSATTQAPPSSSAPPETTAAPPTP 218
Score = 35.0 bits (79), Expect = 0.017
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P +++ P T P + + ++ PP T T SA L PS+ P P
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAPPET----TAVPPTPSATTLDPSSASAP--P 278
Query: 81 EATPSAPPT-SPLHPAPPSARPAPKPRPAGCFPMGDRNSA 119
E T +APPT S PAPPS +P P+ P+ NS+
Sbjct: 279 ETT-AAPPTPSATTPAPPS---SPAPQETTAAPITTPNSS 314
Score = 34.3 bits (77), Expect = 0.029
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 46 NTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT-SPLHPAPPSARPAPK 104
N+P P T AA + A P P T +APPT S APPS+ P+
Sbjct: 158 NSPAPQDTT-------AAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPE 210
Query: 105 -----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
P P P +SA PP P+
Sbjct: 211 TTAAPPTPPATTPAPPSSSAPPETTAAPPTPS 242
Score = 31.2 bits (69), Expect = 0.24
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P S+ P P +T A A+ P+ L P + +
Sbjct: 218 PPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAP 277
Query: 87 PPTSPLHPAPPSARPAPKPRPA 108
P T+ P P + PAP PA
Sbjct: 278 PETTAAPPTPSATTPAPPSSPA 299
Score = 30.4 bits (67), Expect = 0.41
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH 93
P +A + T PPS++ A + A P+ PE T + P S
Sbjct: 186 PETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATT 245
Query: 94 PAPPSARPAPK-----PRPAGCFPMGDRNSARGFAVLEPPAPA 131
PAP S+ P+ P P+ SA PP P+
Sbjct: 246 PAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPS 288
Score = 28.9 bits (63), Expect = 1.2
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAA--GSAHALRPSAVPGPL 78
P+++A P P SA + ++ P +TA T S+ + P P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 79 CPEATPSAPPTSPLHP---APPSARPAPKP 105
P AT APP+SP A P P P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNSSP 315
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 40.0 bits (92), Expect = 5e-04
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 13 GYRGGRHYPNAAAGPARGTWIPGFSAERSS---RRRNTPRPPSTATMVTGRVAAGSAHAL 69
G R H A+ R W+ +A ++ + TP P G +G
Sbjct: 23 GVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRS 82
Query: 70 RPSAVPGPLCPEATPSAPPTSPLHPAPPSARP------APKPRPAGCFPMGDR----NSA 119
S+ P PL P+ P PP+ P P PPS P AP P P P+G +S+
Sbjct: 83 PDSSSPNPL-PQGVP--PPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSS 139
Query: 120 RGFAVLEPPAP 130
G L PPAP
Sbjct: 140 MGSPGLPPPAP 150
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 40.0 bits (92), Expect = 5e-04
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPG-PLCPEATPSAPPTSPL 92
PG AE +S ++ PP+ + + +L +PG E P PP SP
Sbjct: 273 PGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPS 332
Query: 93 HPAPP-----SARPAPKPRPAGCFPM-----GDRNSARGFAVLEPPAP 130
APP A PAP P P G P R A G + PPAP
Sbjct: 333 FQAPPQKAGAQALPAP-PAPPGSQPFLQKKRHGRPGAGGGKLNPPPAP 379
Score = 32.0 bits (71), Expect = 0.14
Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 19/99 (19%)
Query: 49 RPPSTATMVTGRVAAGSAHALRPSAVP-----GPLCPEATPSAPPTSPLH---------- 93
RP + G+ G +P GPL P A+P TS H
Sbjct: 110 RPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRP 169
Query: 94 --PAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
PAPP P P P P P +S ++ PP P
Sbjct: 170 NVPAPPPPTPPPPPPPLP--PPLPSSSPIKTPLVSPPGP 206
Score = 31.6 bits (70), Expect = 0.19
Identities = 18/60 (30%), Positives = 22/60 (36%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRP 107
P PP + + + S + PGPL P P P P PP P P P P
Sbjct: 177 PTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPP 236
Score = 29.6 bits (65), Expect = 0.70
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 18/83 (21%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRP 107
P PP T + A L AV L P P PP PL PP P K P
Sbjct: 228 PPPPPTPPPLP------PASVLSDKAVKPQLAPLHLPPIPPPLPL--LPPCGYPGLKAEP 279
Query: 108 AGCFPMGDRNSARGFAVLEPPAP 130
A P D EPPAP
Sbjct: 280 AS--PAQDAQ--------EPPAP 292
Score = 28.1 bits (61), Expect = 2.1
Identities = 23/87 (26%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPG--PL 78
P A+ P P SS P PP + + AG+ P A PG P
Sbjct: 298 PYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPF 357
Query: 79 CPEATPSAPPTSPLHPAPPSARPAPKP 105
+ P PP A PA P
Sbjct: 358 LQKKRHGRPGAGGGKLNPPPAPPARSP 384
Score = 27.3 bits (59), Expect = 3.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Query: 74 VPGPLCPEATPSAPPTSPLHPAPPSARP 101
VP P P P PP P PPSA P
Sbjct: 3 VPPPPPPPLPPPPPPLGAPPPPPPSAPP 30
Score = 26.9 bits (58), Expect = 4.6
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 84 PSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSA 119
P PP P P PP AP P P P+ S+
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSS 37
Score = 26.2 bits (56), Expect = 7.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 87 PPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSAR 120
PP PL P PP P P P+ D +S R
Sbjct: 6 PPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLR 39
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 40.0 bits (92), Expect = 5e-04
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 57 VTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDR 116
+ G + G+ PS+VPG L P P P L P PP P P P G P+G
Sbjct: 527 IPGGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPPGPPPLG-- 584
Query: 117 NSARGFAVLEPP 128
A++ PP
Sbjct: 585 ------AIMPPP 590
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 39.7 bits (91), Expect = 7e-04
Identities = 22/61 (36%), Positives = 26/61 (42%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
T RPP + ++A +P P P P A PP SP P PP A P P P
Sbjct: 306 TTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPP 365
Query: 107 P 107
P
Sbjct: 366 P 366
Score = 33.5 bits (75), Expect = 0.049
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMG 114
P+A P P P PP SPL P PP P P P P G
Sbjct: 340 PAAQPRPPPSPPPPPPPPASPLPPPPPP--PPPTPSSTTKLPQG 381
Score = 29.3 bits (64), Expect = 0.92
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
TP PP+T + A P P P P PP + P PP + P P P
Sbjct: 301 TPPPPTTRPPPIRPPFSHPISAHLPWYFQPP--PRPLPPRPPAA--QPRPPPSPPPPPPP 356
Query: 107 PAGCFP 112
PA P
Sbjct: 357 PASPLP 362
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 38.9 bits (89), Expect = 0.001
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 17/97 (17%)
Query: 18 RHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP 77
R P+ PARGT A R+ R+ P PP + V+G PS P P
Sbjct: 758 RTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSG-----------PSPEPPP 806
Query: 78 LCPEATPSAPPTSP-----LHPAPPSARPAPKPRPAG 109
L P T P PA PS P P P PAG
Sbjct: 807 LDESPGPKEGATGPRRRTLSEPAGPSEPPGP-PAPAG 842
Score = 36.2 bits (82), Expect = 0.008
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 21 PNAAAGPARGTWIP---GFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP 77
P A P R T +P F+ S + P+ + T +A G A SA PGP
Sbjct: 882 PKPAGPPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVA-----SATPGP 936
Query: 78 LCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
+AP SP P A P+P P+ G ++PP P
Sbjct: 937 -------AAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVP 982
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 50 PPSTATMVTGRVAAGSAHALRPSAVPGPLCP--EATPSAPPTSPLHPAPPSARPAPKPRP 107
PP +V+ RV +A PSA P PL P TP P P HP S P P
Sbjct: 256 PPGIVEVVSKRVGIPAARL--PSA-PTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSP 312
Query: 108 AGCFPMGDRNS 118
P GDRNS
Sbjct: 313 DS--PAGDRNS 321
Score = 26.2 bits (56), Expect = 7.8
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
T RPP + + G+ + P P P P AP PP+ P P PR
Sbjct: 654 TERPPKLCSSLPGQGPPPYVF-MYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDP-PR 711
Query: 107 P 107
P
Sbjct: 712 P 712
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 38.9 bits (89), Expect = 0.001
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 17/97 (17%)
Query: 18 RHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP 77
R P+ PARGT A R+ R+ P PP + V+G PS P P
Sbjct: 840 RTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSG-----------PSPEPPP 888
Query: 78 LCPEATPSAPPTSP-----LHPAPPSARPAPKPRPAG 109
L P T P PA PS P P P PAG
Sbjct: 889 LDESPGPKEGATGPRRRTLSEPAGPSEPPGP-PAPAG 924
Score = 36.2 bits (82), Expect = 0.008
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 21 PNAAAGPARGTWIP---GFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP 77
P A P R T +P F+ S + P+ + T +A G A SA PGP
Sbjct: 964 PKPAGPPPRETPVPPGLDFNLTESDTVKRRPKCREREPLQTALLAFGVA-----SATPGP 1018
Query: 78 LCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
+AP SP P A P+P P+ G ++PP P
Sbjct: 1019 -------AAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVP 1064
Score = 33.9 bits (76), Expect = 0.037
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 50 PPSTATMVTGRVAAGSAHALRPSAVPGPLCP--EATPSAPPTSPLHPAPPSARPAPKPRP 107
PP +V+ RV +A PSA P PL P TP P P HP S P P
Sbjct: 338 PPGIVEVVSKRVGIPAARL--PSA-PTPLRPGFSRTPQPPAEEPPHPLTYSQLPRVGLSP 394
Query: 108 AGCFPMGDRNS 118
P GDRNS
Sbjct: 395 DS--PAGDRNS 403
Score = 26.2 bits (56), Expect = 7.8
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
T RPP + + G+ + P P P P AP PP+ P P PR
Sbjct: 736 TERPPKLCSSLPGQGPPPYVF-MYPQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDP-PR 793
Query: 107 P 107
P
Sbjct: 794 P 794
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 33 IPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEA---------T 83
+PG + S+ TP PP +P P P P T
Sbjct: 1436 LPGLPSANSN---GTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPT 1492
Query: 84 PSAPPTSPLHPAPPSARPAPKPRP 107
PS+PP PL P PP A P+P P P
Sbjct: 1493 PSSPPPPPLPPPPPPAMPSPPPPP 1516
Score = 34.3 bits (77), Expect = 0.029
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 80 PEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMG 114
P++ P + P L P PP+ P P P+G F +G
Sbjct: 1310 PKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLG 1344
Score = 30.4 bits (67), Expect = 0.41
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
P P P P P PP P P+PP P P P A
Sbjct: 1487 PLVAPTPSSPPPPPLPPPPPPAMPSPP---PPPPPAAA 1521
Score = 29.6 bits (65), Expect = 0.70
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 72 SAVPGPL----CPEATPSAPPTSPL--HPAPPSARPAPKPRP 107
+AVPGP P A + P PL PP+ PAP P+P
Sbjct: 1428 AAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQP 1469
Score = 29.6 bits (65), Expect = 0.70
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 77 PLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
PL E P PP +P P P P P P+PA
Sbjct: 1451 PLLEEKPPPTPPPAPT-PQPQPPPPPPPPQPA 1481
Score = 29.6 bits (65), Expect = 0.70
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 72 SAVPGPLCPEATPSAPPTSPLHPAPPSARP--APKPRPAGCFP 112
S P PL P P+ P SP P PP+A P AP PA P
Sbjct: 1495 SPPPPPLPPPPPPAMP--SPPPPPPPAAAPLAAPPEEPAAPSP 1535
Score = 29.3 bits (64), Expect = 0.92
Identities = 18/61 (29%), Positives = 21/61 (34%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
P P P P P PT P PP P P P+ P + EP AP
Sbjct: 1474 PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAP 1533
Query: 131 A 131
+
Sbjct: 1534 S 1534
Score = 28.9 bits (63), Expect = 1.2
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 50 PPSTATMVTGRVAAGSAHALRPS------AVPGPLCPE-ATPSAPPTSPLHPAPPSARPA 102
P + + AA +A P A PGP PE A P + P SA+P
Sbjct: 242 PTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPP 301
Query: 103 PKPRPA 108
P P PA
Sbjct: 302 PPPPPA 307
Score = 28.5 bits (62), Expect = 1.6
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAP----PSARPAP 103
P PP A + A + + P +P P P A PS PP P AP P AP
Sbjct: 1475 PPPPQPALPSPPPLVAPTPSSPPPPPLPPPP-PPAMPSPPPPPPPAAAPLAAPPEEPAAP 1533
Query: 104 KP 105
P
Sbjct: 1534 SP 1535
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 76 GPLCPEATPSAPPTSP---LHP-APPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
GP CP A P +P L P PP P G G +A PP PA
Sbjct: 991 GPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPA 1050
Score = 26.9 bits (58), Expect = 4.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
P+ P P P+ P PP P PA PS P P P+
Sbjct: 1459 PTPPPAPT-PQPQPPPPPPPP-QPALPSPPPLVAPTPS 1494
Score = 26.9 bits (58), Expect = 4.6
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRP 107
P P + V+AG + A P A P PE P P +A P P P P
Sbjct: 1671 PVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEP-PAP 1729
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 14/118 (11%)
Query: 24 AAGPARGTWIPGFSAERSS---RRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
A G AR W+PG SAE S+ P P T + V S A +P GP P
Sbjct: 54 APGEARPAWVPG-SAETSAPAPAPAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESP 112
Query: 81 E-------ATPSAPPTSPLHPAPPSARPAPKP---RPAGCFPMGDRNSARGFAVLEPP 128
E T A P ARP+P P P G +A G +PP
Sbjct: 113 EPAAVAGVETSRALAAGADSPKTEEARPSPAPGPGTPTGTPTRTPSRTAPGALTAKPP 170
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 47 TPRPPSTATMVTGRVAAGSAHA-----LRPSAVPGPLCPEATPSAPPTSPLHPAPPSARP 101
+P P + A + T R A A + RPS PGP P TP+ P S P +A+P
Sbjct: 111 SPEPAAVAGVETSRALAAGADSPKTEEARPSPAPGPGTPTGTPTRTP-SRTAPGALTAKP 169
Query: 102 APKPRP 107
P+P
Sbjct: 170 PLAPKP 175
Score = 32.0 bits (71), Expect = 0.14
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 19/102 (18%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPP------------STATMVTGRVAAGSAHA 68
P+ A GP T P + R++ T +PP TA +G+V G A
Sbjct: 140 PSPAPGPGTPTGTPTRTPSRTAPGALTAKPPLAPKPGTTVASGVTARSASGQVTGGHGAA 199
Query: 69 LRPSAVPGPLCPEATPSAPPTSP-----LHPAPPSARPAPKP 105
SA G PE PS P T P A + PAP+P
Sbjct: 200 AATSASAGQ-APE-DPSGPGTGPSGTCEAPVAVVTVTPAPEP 239
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/94 (38%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 17 GRHYPNAAAGPARGTWIPGFSAERS-SRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVP 75
G+H AAAG A PG A S S+R+ TP S T V GS P+ P
Sbjct: 675 GKHSA-AAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHT-----VEHGSPRTRDPTPRP 728
Query: 76 GPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
L EAT A P+ PP AR PRP G
Sbjct: 729 PGLPEEATALAAPS------PPRARARAAPRPLG 756
Score = 33.1 bits (74), Expect = 0.064
Identities = 38/109 (34%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 16 GGRHYPNAA---AGPARGTW-IPGFSAERSSRRRNTPRPPSTAT-----MVTGR---VAA 63
GG Y A A PAR I G S S RR P PP AT + G+ AA
Sbjct: 624 GGALYARVARREARPARARGEIGGLSLSPSPERRKPP-PPDPATKPKVSWIHGKHSAAAA 682
Query: 64 GSAHALRP---SAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
G A + P A P P + TPS + P R P PRP G
Sbjct: 683 GRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRD-PTPRPPG 730
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 43 RRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATP--------SAPPTSPLHP 94
RRR+ + A+M+ V + R G P P S PP SP
Sbjct: 760 RRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARA 819
Query: 95 APPSARPAPK 104
P + P P+
Sbjct: 820 PPATETPGPE 829
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 38.5 bits (88), Expect = 0.002
Identities = 36/94 (38%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 17 GRHYPNAAAGPARGTWIPGFSAERS-SRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVP 75
G+H AAAG A PG A S S+R+ TP S T V GS P+ P
Sbjct: 670 GKHSA-AAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHT-----VEHGSPRTRDPTPRP 723
Query: 76 GPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
L EAT A P+ PP AR PRP G
Sbjct: 724 PGLPEEATALAAPS------PPRARARAAPRPLG 751
Score = 33.1 bits (74), Expect = 0.064
Identities = 38/109 (34%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 16 GGRHYPNAA---AGPARGTW-IPGFSAERSSRRRNTPRPPSTAT-----MVTGR---VAA 63
GG Y A A PAR I G S S RR P PP AT + G+ AA
Sbjct: 619 GGALYARVARREARPARARGEIGGLSLSPSPERRKPP-PPDPATKPKVSWIHGKHSAAAA 677
Query: 64 GSAHALRP---SAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
G A + P A P P + TPS + P R P PRP G
Sbjct: 678 GRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRD-PTPRPPG 725
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 43 RRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATP--------SAPPTSPLHP 94
RRR+ + A+M+ V + R G P P S PP SP
Sbjct: 755 RRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARA 814
Query: 95 APPSARPAPK 104
P + P P+
Sbjct: 815 PPATETPGPE 824
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 48 PRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRP 107
P P T+T + ++ GSA P + G C P A P A P A P+P P
Sbjct: 582 PGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQP-----GAQPGASPSPSQPP 636
Query: 108 AGCFPMGDRNSARGFAVLEPPAP 130
A P R ++ A + P P
Sbjct: 637 ADQSPHTLRKVSKKLAPIPPKVP 659
Score = 31.6 bits (70), Expect = 0.19
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 34 PGFSAERSSRRRN----TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPT 89
PG A++S+ + + +P PPST + G ++ S G L P A P
Sbjct: 663 PGAMADQSAGQPSPVSLSPTPPSTPSPY------GLSYPQGYSLASGQLSPAAAPPLASP 716
Query: 90 SPLHPAPPSARPAPKPRPAGCFP 112
S +RP PKPR P
Sbjct: 717 SVFTSTLSKSRPTPKPRQRPTLP 739
Score = 28.1 bits (61), Expect = 2.1
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 64 GSAHALRPSAVPGPLCPEATPS---APPTSPL--HPAPPSARPAPKPRPAGCFPMGDRNS 118
GS+ + S P + P A P+ AP SPL P A PA P G P +R S
Sbjct: 529 GSSAGRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGLQPGPERTS 588
Query: 119 ARGFAVLEP 127
L P
Sbjct: 589 TTKSKELSP 597
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 38.1 bits (87), Expect = 0.002
Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 16 GGRHYPNAAAGPARGTWIPGFS-AERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAV 74
GGRH AAA G GF A + P PP + T GR G +
Sbjct: 41 GGRHAAAAAALQLYGNSAAGFPHAPPQAHAHPHPSPPPSGTGCGGREGRGQEYFH----- 95
Query: 75 PGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
PG P A A P P PP P P P P G
Sbjct: 96 PGGGSPAAAYQAAP-----PPPPHPPPPPPPPPCG 125
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 38.1 bits (87), Expect = 0.002
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 17/98 (17%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLC- 79
P P T P + + TP PP+T + S L P+ P P
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP----PASTTTLPPTTTPSPPTT 1528
Query: 80 ------PEATPSAPPTSPLHP------APPSARPAPKP 105
P TPS P T+P+ P PP+ P+P P
Sbjct: 1529 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP 1566
Score = 36.6 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP--- 77
P P T I ++ + TP PP+T T S P P
Sbjct: 1496 PTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1555
Query: 78 LCPEATPSAPPTSPLHPAPPSARPAP 103
L P TPS PPT+ P PP+ P+P
Sbjct: 1556 LPPTTTPSPPPTTTTTP-PPTTTPSP 1580
Score = 36.2 bits (82), Expect = 0.008
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGP---LCPEATPSAPPTSPLHPAPPSARPAP 103
TP PP+T T S P P L P TPS PPT+ P PP+ P+P
Sbjct: 1601 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP-PPTTTPSP 1659
Score = 34.7 bits (78), Expect = 0.022
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P + S TP PP+ T S + P P TPS
Sbjct: 1565 PPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPP----PTTTPSP 1620
Query: 87 PPTSPLHP------APPSARPAPKP 105
P T+P+ P PP+ P+P P
Sbjct: 1621 PTTTPITPPTSTTTLPPTTTPSPPP 1645
Score = 33.9 bits (76), Expect = 0.037
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 47 TPRPPSTATMV-----TGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARP 101
TP PP T T T + P+ P P P TPS P T+P P + P
Sbjct: 1437 TPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSP--PTTTPSPPTTTPSPPTTTTTTP 1494
Query: 102 APKPRPA 108
P P+
Sbjct: 1495 PPTTTPS 1501
Score = 32.3 bits (72), Expect = 0.11
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P + + TP PP + T S P+ P P P TPS
Sbjct: 1433 PPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSP----PTTTPSP--PTTTPS- 1485
Query: 87 PPTSPLHPAPPSARPAP 103
PPT+ PP+ P+P
Sbjct: 1486 PPTTTTTTPPPTTTPSP 1502
Score = 32.0 bits (71), Expect = 0.14
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
TP PP+T T S L P+ P P T P T+P P + P P
Sbjct: 1398 TPSPPTT----TPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTT 1453
Query: 107 PA 108
P+
Sbjct: 1454 PS 1455
Score = 32.0 bits (71), Expect = 0.14
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P + SS TP PP+T TM T + + + P TPS
Sbjct: 1668 PITTTTTPPPTTTPSSPITTTPSPPTT-TMTTPSPTTTPSSPITTTTTPSST---TTPSP 1723
Query: 87 PPTSPLHPAPPSARPAP 103
PPT+ P+ P+ P+P
Sbjct: 1724 PPTTMTTPS-PTTTPSP 1739
Score = 31.2 bits (69), Expect = 0.24
Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPR 106
TP PP+T T + + P+ P P P T + PP + P+PP+ P P
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPP---PTTTPSP--PTTTTTTPPPTTT-PSPPTTTPITPPT 1630
Query: 107 PAGCFPMGDRNSARGFAVLEPP 128
P S PP
Sbjct: 1631 STTTLPPTTTPSPPPTTTTTPP 1652
Score = 30.8 bits (68), Expect = 0.32
Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALR-----PSAVPGPLCPEATPSAPPTSP----LHPAPP 97
TP PP+T T S P+ P P T P T+P P+PP
Sbjct: 1421 TPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPP 1480
Query: 98 SARPAPKPRPAGCFPMGDRNSARGFAVLEPPA 129
+ P+P P S + PPA
Sbjct: 1481 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPA 1512
Score = 30.8 bits (68), Expect = 0.32
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 13/83 (15%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P P T I ++ + TP PP T T P+ P P P
Sbjct: 1535 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP-----------PTTTPSP--P 1581
Query: 81 EATPSAPPTSPLHPAPPSARPAP 103
T +PPT PP+ P+P
Sbjct: 1582 TTTTPSPPTITTTTPPPTTTPSP 1604
Score = 30.0 bits (66), Expect = 0.54
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 27 PARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSA 86
P T P + S TP PP T T S+ + P +P+
Sbjct: 1644 PPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT 1703
Query: 87 PPTSPL-HPAPPSARPAPKPRP 107
P+SP+ PS+ P P P
Sbjct: 1704 TPSSPITTTTTPSSTTTPSPPP 1725
Score = 29.6 bits (65), Expect = 0.70
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 47 TPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAP 103
TP PP+T + S L P+ P P P T + PP + P + P+P
Sbjct: 1617 TPSPPTTTPITPPT----STTTLPPTTTPSP--PPTTTTTPPPTTTPSPPTTTTPSP 1667
Score = 26.9 bits (58), Expect = 4.6
Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 13/82 (15%)
Query: 21 PNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCP 80
P P T I ++ + TP PP T T P+ P P P
Sbjct: 1614 PTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP-----------PTTTPSP--P 1660
Query: 81 EATPSAPPTSPLHPAPPSARPA 102
T +PP + PP+ P+
Sbjct: 1661 TTTTPSPPITTTTTPPPTTTPS 1682
Score = 26.9 bits (58), Expect = 4.6
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLC---------PEATP 84
P S ++SR ++P ST + T A PS P P +T
Sbjct: 4216 PESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTT 4275
Query: 85 SAPPTSPLHPAPPSARPAPKP 105
++PP +P + AP P
Sbjct: 4276 TSPPGTPTRGTTTGSSSAPTP 4296
Score = 26.9 bits (58), Expect = 4.6
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 75 PGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGC 110
P P TPS +P P+ ++P P +P C
Sbjct: 4377 PSTPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPPEC 4412
Score = 26.9 bits (58), Expect = 4.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARP 101
PS P P TPS P ++P P P + P
Sbjct: 4380 PSPTPTPSKSTPTPSKPSSTPSKPTPGTKPP 4410
Score = 26.2 bits (56), Expect = 7.8
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 50 PPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPA 108
PP ++T T R + P E T +APP++P P S P P+
Sbjct: 4215 PPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPS 4273
Score = 26.2 bits (56), Expect = 7.8
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 14/62 (22%)
Query: 50 PPSTATMVTGR----VAAGSAHALRPSAV---------PGPLCPEATPSAPPTSPLHPAP 96
PPST T G GS+ A PS V P P P +TPS T+ L P P
Sbjct: 4271 PPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTP-TPLSTPSIIRTTGLRPYP 4329
Query: 97 PS 98
S
Sbjct: 4330 SS 4331
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 17 GRHYPNAAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPG 76
G P++ A PA IP + + ++P P A + S H RP + P
Sbjct: 746 GPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLP-SPHPTRPPSRP- 803
Query: 77 PLCPEATPSAPPTSPLHPAPPSARPAPKP 105
P P++ P PLHP PP P P
Sbjct: 804 PSRPQSVSRPPSEPPLHPCPPPQAPPTLP 832
Score = 28.9 bits (63), Expect = 1.2
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 17/99 (17%)
Query: 23 AAAGPARGTWIPGFSAERSS-RRRNTPR---PPSTATMVTGRVAAGSAHALRPSAVPGPL 78
A AGPA T + G + S+ NTP P+T TG A P A P
Sbjct: 573 APAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVS 632
Query: 79 CP----------EATPSAPPTSPLHPAPPSARPAPKPRP 107
P + P AP +P APP A P+P P
Sbjct: 633 TPLPLGLQQPQAQQPPQAP--TPQAAAPPQA-TTPQPSP 668
Score = 28.1 bits (61), Expect = 2.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 48 PRPPSTATMVTGRVAAGSAHAL--RPSAVPGPLCPEA-TPSAPPTSPLHPAPPSARPAPK 104
P P+ T++ G SA A+ P + P P A T A P + PAP +
Sbjct: 574 PAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVST 633
Query: 105 PRPAG 109
P P G
Sbjct: 634 PLPLG 638
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 50 PPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTSPLH-PAPPSARPAPKPRPA 108
PP+ VA G+ L P A P P P +PL P P S+ P P
Sbjct: 728 PPAQDPAPATPVAKGAG--LGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPL 785
Query: 109 GCFP 112
G P
Sbjct: 786 GDSP 789
Score = 27.7 bits (60), Expect = 2.7
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 50 PPSTATMVTGRVAAGSAHALRPSA------VPGPLCPEATPSAPPTSPLHPAPPSARPAP 103
PPS+ + + S+ P+ P P +P+ PPT L P P+A P P
Sbjct: 880 PPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVP-EPAAPPPP 938
Query: 104 KPR 106
PR
Sbjct: 939 PPR 941
Score = 27.3 bits (59), Expect = 3.5
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 12/47 (25%)
Query: 71 PSAVP--GPLCPEATPSAPPTSPL---------HPAPPSARPAPKPR 106
P+A P GP P ++PS P +PL HP P +RP +P+
Sbjct: 763 PAAAPLKGP-GPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQ 808
Score = 26.9 bits (58), Expect = 4.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Query: 62 AAGSAHALRPSAVPGPLCPEAT--------PSAPPTSPLH---PAPPSARPAPKPRPA 108
A G+ A + S GPL A PS PT+P H PAP +A P PA
Sbjct: 976 AGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLPPLLPA 1033
Score = 26.9 bits (58), Expect = 4.6
Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 21 PNAAAGPARGTWIPGFSAER--SSRRRNTPRP-----------PSTATMVTG-RVAAGSA 66
P AA A+GT P + A ++RR + P P T+ + A S
Sbjct: 1449 PEPAASAAQGTGDPDWEAPGLPPAKRRKSESPDVDQASFSSDSPQDDTLTEHLQSAIDSI 1508
Query: 67 HALR--PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSAR 120
L+ P P P P A + P SP PP RP P + +G R R
Sbjct: 1509 LNLQQAPGRTPAPSYPHAASAGTPASP----PPLHRPEAYPPSSHNGGLGARTLTR 1560
Score = 26.6 bits (57), Expect = 6.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 87 PPTSPLHPAPPSARPAPKPRPAG 109
PP + L A P RP P P P G
Sbjct: 1335 PPPATLKVAEPPPRPPPPPPPTG 1357
Score = 26.2 bits (56), Expect = 7.8
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 75 PGPLCPEATP-SAPPTSPLHPAP 96
PGP P P S PP PL PAP
Sbjct: 855 PGPPQPPLRPQSQPPEGPLPPAP 877
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 13/75 (17%)
Query: 70 RPSAVPGPLCPEATPSAPPTSPLHP-------------APPSARPAPKPRPAGCFPMGDR 116
RP+A PGP P A P+ P +P+ APP P P P P
Sbjct: 716 RPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGS 775
Query: 117 NSARGFAVLEPPAPA 131
S G A P PA
Sbjct: 776 GSGPGLAPARSPGPA 790
Score = 32.3 bits (72), Expect = 0.11
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 34 PGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTS-PL 92
PG A + R +P P A+ G + G L P P P +P+A P + P
Sbjct: 888 PGVEARTPADRGPSPAPAPAASPQPG--SRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPP 945
Query: 93 HPAPPS---------ARPAPKPRPAG 109
PAPPS ++ P P P G
Sbjct: 946 PPAPPSYSDKGVQTPSKGTPAPLPNG 971
Score = 31.6 bits (70), Expect = 0.19
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 58 TGRVAAGSAHALR-PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAG 109
+GR A A A R P A PGP APP P P P + P P R G
Sbjct: 601 SGRRAPEDAPAARRPKAPPGPA------RAPPGQPAEPDAPRSSPGPGAREEG 647
Score = 31.2 bits (69), Expect = 0.24
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 10/60 (16%)
Query: 71 PSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
PS P P S P L P P P P P PA A AV PPAP
Sbjct: 900 PSPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPPPSPA----------AAPEAVPPPPAP 949
Score = 26.2 bits (56), Expect = 7.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 80 PEATPSAPPTSPLHPAPPSARPAPKPR 106
P P+APP P APP+ PA R
Sbjct: 713 PPRRPAAPPGPPGPAAPPAPSPAAPVR 739
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.002
Identities = 37/130 (28%), Positives = 44/130 (33%), Gaps = 17/130 (13%)
Query: 14 YRGGRHYPNAA------------AGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRV 61
Y+G Y NAA A P P +A + P PP
Sbjct: 87 YKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPA 146
Query: 62 AAGSAHALRPSAVPGPLCPEATPSAPPTSPLHPAPPSARPAPKPRPAGCFPMGDRNS-AR 120
A A A +A P P + P A +PL P PAP PA P G R +
Sbjct: 147 RAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPP----PAPAAPPAVAPPAGPRRAPPP 202
Query: 121 GFAVLEPPAP 130
A EPP P
Sbjct: 203 AVAAREPPLP 212
Score = 36.2 bits (82), Expect = 0.008
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 35 GFSAERSSRRRNTPR----PPSTATMVTGRVAAGSAHALRPSAVPGPLCPEATPSAPPTS 90
G + R++ R PR PP+ G AA +A A P+ P P +AP +
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA 148
Query: 91 PLHPAPPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAPA 131
P A + P P P PA P R + PPAPA
Sbjct: 149 PRAAAAAATAP-PSPGPAQPGPRAQRAAP---LAAPPPAPA 185
Score = 35.4 bits (80), Expect = 0.013
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 40 RSSRRRNTPRPPSTATMVTG--------RVAAGSAHALRPSAVPGPLCPEATPSAPPTSP 91
R RRR+ P P T + RV+ + + R +A P ATP APP +P
Sbjct: 56 RMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAP 115
Query: 92 LH-PA-------PPSARPAPKPRPAGCFPMGDRNSARGFAVLEPPAP 130
PA PP+ P P P P A A PP+P
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Score = 35.0 bits (79), Expect = 0.017
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 23 AAAGPARGTWIPGFSAERSSRRRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGPLCPEA 82
A A P+ G PG A+R++ P P+ V A +A PL P
Sbjct: 156 ATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPP 215
Query: 83 TPSAPPTSPLHPAPPSARPAPK 104
P APP P PP +P P+
Sbjct: 216 QPPAPPQQQ-QPPPPQPQPPPE 236
Score = 31.6 bits (70), Expect = 0.19
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 21 PNAAAGPARGTWIPGFSAERSSR---RRNTPRPPSTATMVTGRVAAGSAHALRPSAVPGP 77
P AAA PAR +A + PR A + A + A+ P A P
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRR 198
Query: 78 LCPEATPSAPPTSPLHPAPPS-----ARPAPKPRP 107
P A + P P P PP+ P P+P+P
Sbjct: 199 APPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP 233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,975,955
Number of Sequences: 37866
Number of extensions: 558361
Number of successful extensions: 14029
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 1254
Number of HSP's that attempted gapping in prelim test: 6218
Number of HSP's gapped (non-prelim): 6386
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.