Search of human proteins with 239753144

Search of human proteins with 239753144

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]
         (407 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]           822   0.0  
gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo ...   822   0.0  
gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo ...   822   0.0  
gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]            36   0.055
gi|169168706 PREDICTED: hypothetical protein [Homo sapiens]            36   0.055
gi|169169649 PREDICTED: hypothetical protein [Homo sapiens]            36   0.055
gi|111154074 palmitoylated membrane protein 7 [Homo sapiens]           35   0.093
gi|239751624 PREDICTED: hypothetical protein XP_002347938 [Homo ...    35   0.16 
gi|239746135 PREDICTED: hypothetical protein XP_002344205 [Homo ...    35   0.16 
gi|239756804 PREDICTED: hypothetical protein [Homo sapiens]            33   0.61 
gi|239751298 PREDICTED: hypothetical protein XP_002347799 [Homo ...    33   0.61 
gi|239745795 PREDICTED: hypothetical protein XP_002343591 [Homo ...    33   0.61 
gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo sap...    32   0.79 
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ...    32   1.0  
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        32   1.0  
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        32   1.0  
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         32   1.0  
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         32   1.0  
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         32   1.0  
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         32   1.0  
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         32   1.0  
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         32   1.0  
gi|239757116 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239754351 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239752278 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239751619 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239748899 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  
gi|239746791 PREDICTED: hypothetical protein XP_002343850 [Homo ...    32   1.3  
gi|169213518 PREDICTED: hypothetical protein [Homo sapiens]            32   1.3  

>gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 407

 Score =  822 bits (2123), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60
           MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR
Sbjct: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60

Query: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120
           QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR
Sbjct: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120

Query: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180
           ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR
Sbjct: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180

Query: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240
           VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR
Sbjct: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240

Query: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300
           VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES
Sbjct: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300

Query: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360
           HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER
Sbjct: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360

Query: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407
           EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE
Sbjct: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407


>gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo
           sapiens]
          Length = 407

 Score =  822 bits (2123), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60
           MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR
Sbjct: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60

Query: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120
           QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR
Sbjct: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120

Query: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180
           ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR
Sbjct: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180

Query: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240
           VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR
Sbjct: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240

Query: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300
           VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES
Sbjct: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300

Query: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360
           HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER
Sbjct: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360

Query: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407
           EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE
Sbjct: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407


>gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo
           sapiens]
          Length = 407

 Score =  822 bits (2123), Expect = 0.0
 Identities = 407/407 (100%), Positives = 407/407 (100%)

Query: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60
           MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR
Sbjct: 1   MIHRPLVDKNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQVGLVTHTR 60

Query: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120
           QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR
Sbjct: 61  QTVPPHDLIQFCLHSSLHIRIPALPGEEEEQPLQRGGQGVLAGAEDVSDSGRYVLQIQPR 120

Query: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180
           ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR
Sbjct: 121 ATTVRVPGRLLFRREDKGVHHVAGGGPGPKAFAVPQELVQDEVAEVAVELLEFAENGAHR 180

Query: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240
           VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR
Sbjct: 181 VGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPR 240

Query: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300
           VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES
Sbjct: 241 VEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAES 300

Query: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360
           HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER
Sbjct: 301 HAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQADLENVAVAPRQASER 360

Query: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407
           EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE
Sbjct: 361 EVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHRQE 407


>gi|169169054 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225

Query: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283

Query: 397 AHMHSGQHRQE 407
              H G H  E
Sbjct: 284 HRDHIGMHVHE 294


>gi|169168706 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225

Query: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283

Query: 397 AHMHSGQHRQE 407
              H G H  E
Sbjct: 284 HRDHIGMHVHE 294


>gi|169169649 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 399

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 23/131 (17%)

Query: 287 APLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLVDGALAIQHHYGAAAQAD 346
           AP+HL  L+V  E H          G G PV   R     G  DGA  +Q    A     
Sbjct: 177 APVHLLALKVAKEVH----------GVGGPVLRRRQRACSGR-DGAALVQQEDTALLCLP 225

Query: 347 LENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGR-------GPE-LPPPLPQQP--L 396
            ++ A  P Q  +   ++LA R R + Q P   ARGR        P+ L PPL  QP  L
Sbjct: 226 ADHAAAVP-QKPDLHQAQLAGRGRGAAQRP-LAARGRRFLDFPAQPQVLAPPLAHQPPQL 283

Query: 397 AHMHSGQHRQE 407
              H G H  E
Sbjct: 284 HRDHIGMHVHE 294


>gi|111154074 palmitoylated membrane protein 7 [Homo sapiens]
          Length = 576

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 9   KNHSVLGNVVAQDRGVGSGGMRNSDRHKAGEAHGFIKEGQDIGQV-GLVTHTRQTVPPHD 67
           KN   LG  + +D   G+  +    R  A +  G I  G ++ +V G+    ++   P +
Sbjct: 144 KNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKR---PEE 200

Query: 68  LIQFCLHSSLHIRIPALPGEEEEQPLQRG 96
           +IQ    S   I    +PG +EE P + G
Sbjct: 201 IIQILAQSQGAITFKIIPGSKEETPSKEG 229


>gi|239751624 PREDICTED: hypothetical protein XP_002347938 [Homo
           sapiens]
          Length = 244

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 271 AARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEG---RALLHQG 327
           A  LAR ++ H  V    +    L +V    AA    H    +  P+ +      +  +G
Sbjct: 59  AGALARRQLVHRVVAAVRVQEGHLVLVGRRAAAGLRAHPLPPQAPPLAQSSQPEVVDARG 118

Query: 328 LVDGALAIQHHYGAAAQADLENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGRGPEL 387
            + GA A+   +    +     +A A  Q ++    R   R R     PR  AR  G   
Sbjct: 119 SLAGACAVAEQHRLVGRVAQAQLAHAHLQLAQPARPRPQPRTRAPPPGPRPTARTWG--- 175

Query: 388 PPPLPQQPLAHMH 400
            PP P + LA +H
Sbjct: 176 -PPSPGRQLAQLH 187


>gi|239746135 PREDICTED: hypothetical protein XP_002344205 [Homo
           sapiens]
          Length = 244

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 271 AARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEG---RALLHQG 327
           A  LAR ++ H  V    +    L +V    AA    H    +  P+ +      +  +G
Sbjct: 59  AGALARRQLVHRVVAAVRVQEGHLVLVGRRAAAGLRAHPLPPQAPPLAQSSQPEVVDARG 118

Query: 328 LVDGALAIQHHYGAAAQADLENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGRGPEL 387
            + GA A+   +    +     +A A  Q ++    R   R R     PR  AR  G   
Sbjct: 119 SLAGACAVAEQHRLVGRVAQAQLAHAHLQLAQPARPRPQPRTRAPPPGPRPTARTWG--- 175

Query: 388 PPPLPQQPLAHMH 400
            PP P + LA +H
Sbjct: 176 -PPSPGRQLAQLH 187


>gi|239756804 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 236

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 41/132 (31%), Positives = 45/132 (34%), Gaps = 18/132 (13%)

Query: 197 AHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQ 256
           AH  P    V   L   G V A A A T G H  GH      P+ +  +   AA +  HQ
Sbjct: 82  AHALPVHQCVQGLLHPSGRVAAQARAATGGVHPAGH------PQAQGASGATAAARLSHQ 135

Query: 257 LARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRP 316
           L  LA H      AAAR           G      P             GH  EG   RP
Sbjct: 136 L--LAAHGG----AAARQLLLGAGRAVDGFVAQARP-----GPGGQQQGGHEAEGQHDRP 184

Query: 317 -VGEGRALLHQG 327
             G GR  L  G
Sbjct: 185 RTGRGRGALGAG 196


>gi|239751298 PREDICTED: hypothetical protein XP_002347799 [Homo
           sapiens]
          Length = 236

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 41/132 (31%), Positives = 45/132 (34%), Gaps = 18/132 (13%)

Query: 197 AHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQ 256
           AH  P    V   L   G V A A A T G H  GH      P+ +  +   AA +  HQ
Sbjct: 82  AHALPVHQCVQGLLHPSGRVAAQARAATGGVHPAGH------PQAQGASGATAAARLSHQ 135

Query: 257 LARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRP 316
           L  LA H      AAAR           G      P             GH  EG   RP
Sbjct: 136 L--LAAHGG----AAARQLLLGAGRAVDGFVAQARP-----GPGGQQQGGHEAEGQHDRP 184

Query: 317 -VGEGRALLHQG 327
             G GR  L  G
Sbjct: 185 RTGRGRGALGAG 196


>gi|239745795 PREDICTED: hypothetical protein XP_002343591 [Homo
           sapiens]
          Length = 236

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 41/132 (31%), Positives = 45/132 (34%), Gaps = 18/132 (13%)

Query: 197 AHRAPELFVVAEQLTELGVVVAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQ 256
           AH  P    V   L   G V A A A T G H  GH      P+ +  +   AA +  HQ
Sbjct: 82  AHALPVHQCVQGLLHPSGRVAAQARAATGGVHPAGH------PQAQGASGATAAARLSHQ 135

Query: 257 LARLAQHVALEDLAAARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRP 316
           L  LA H      AAAR           G      P             GH  EG   RP
Sbjct: 136 L--LAAHGG----AAARQLLLGAGRAVDGFVAQARP-----GPGGQQQGGHEAEGQHDRP 184

Query: 317 -VGEGRALLHQG 327
             G GR  L  G
Sbjct: 185 RTGRGRGALGAG 196


>gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo
           sapiens]
          Length = 479

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 214 GVVVAVAAAETHGTHDVGH-GHDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAA 272
           G  V VAAA   G    G  GHD +R  + + A  AAA  Q   +A  AQ +A +  AAA
Sbjct: 33  GGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92

Query: 273 RLAR 276
             A+
Sbjct: 93  HAAQ 96


>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
           sapiens]
          Length = 487

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 16/107 (14%)

Query: 308 HTEGGEGRPVGEGRALLHQGLVDGALAI-----QHHYGAAAQADLENV----AVAPRQAS 358
           H   G G   G+ ++L H     GA  +     Q  + A  QAD   +    AV P Q +
Sbjct: 354 HPARGSGSLEGQTQSLRHDR--QGAQQVLPEAQQRAHEAVPQADKARLQVERAVVPAQQA 411

Query: 359 EREVSRLAHRRRVSDQWPRKRARGRGPELPPPLPQQPLAHMHSGQHR 405
              +  L   +R +      RARGR   + P LPQ+P  H  +GQ R
Sbjct: 412 GAHLEGLQQAQRAAVA----RARGRQHRVRPQLPQRP-EHPAAGQVR 453


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2571 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2625

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2626 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2681

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2682 LA----RREDVRHYLQG 2694


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2575 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2629

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2630 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2685

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2686 LA----RREDVRHYLQG 2698


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2571 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2625

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2626 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2681

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2682 LA----RREDVRHYLQG 2694


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2539 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2593

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2594 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2649

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2650 LA----RREDVRHYLQG 2662


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2708 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2762

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2763 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2818

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2819 LA----RREDVRHYLQG 2831


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2549 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2603

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2604 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2659

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2660 LA----RREDVRHYLQG 2672


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2557 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2611

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2612 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2667

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2668 LA----RREDVRHYLQG 2680


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 20/137 (14%)

Query: 156  QELVQDEVAEVAVELLEFAENGAHRVGEVLQPGHHVHQAARAHRAPELFVVAEQLTELGV 215
            +EL Q E      E L   EN   R+ E LQ     H+AA AH      V A Q+     
Sbjct: 2598 EELQQLEQQRRQQEELLAEEN--QRLREQLQLLEEQHRAALAHSEE---VTASQVAATKT 2652

Query: 216  V------VAVAAAETHGTHDVGHGHDGQRPRVEEGAVRAAAHQQRHQLARLAQ-HVALED 268
            +      +   AAE     +  H  DG R +V    ++ A      +L RLAQ H  +++
Sbjct: 2653 LPNGRDALDGPAAEA----EPEHSFDGLRRKVSAQRLQEAGILSAEELQRLAQGHTTVDE 2708

Query: 269  LAAARLAREEVAHHAVG 285
            LA     RE+V H+  G
Sbjct: 2709 LA----RREDVRHYLQG 2721


>gi|239757116 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 497

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 36/105 (34%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 228 HDVGHG-HDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGC 286
           HDVG   H G+  R    AV    H      A LA    L+DL AA L        A+G 
Sbjct: 393 HDVGVARHAGREQRGH--AVAVTFH------AGLAPQQQLQDLQAAGLGAVMQGRVALGA 444

Query: 287 APLHLPVL--RVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLV 329
           AP+HL  L  +V  +   A      E     PVG     L  GLV
Sbjct: 445 APVHLGALLQQVAGDLTVALVARDHEARVAVPVGH----LQVGLV 485


>gi|239754351 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 368 RRRVSDQWPRKRARGRGPELPPPLP 392
           RR+    WPR  A GR P LPP LP
Sbjct: 11  RRQAGVTWPRAGAGGRPPLLPPSLP 35


>gi|239752278 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 24/129 (18%)

Query: 268 DLAAARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQG 327
           DL  A L R++V H               + +  AA AG   +G E R  GE   +    
Sbjct: 46  DLGQAVLGRQQVLH--------------ALLDLVAAEAGAEQDGDEHRRRGEEDRVTGNE 91

Query: 328 LVDGALAIQHHYGAAAQADLENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGRGPEL 387
           + +             QA ++N+   PR    RE      RR V+ +W      G+    
Sbjct: 92  VAEPG-------ETRPQAPVQNLPQHPRAERAREEGEAHARRGVAPEW---IGAGQLCCT 141

Query: 388 PPPLPQQPL 396
           PP LP  PL
Sbjct: 142 PPNLPPSPL 150


>gi|239751619 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 497

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 36/105 (34%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 228 HDVGHG-HDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGC 286
           HDVG   H G+  R    AV    H      A LA    L+DL AA L        A+G 
Sbjct: 393 HDVGVARHAGREQRGH--AVAVTFH------AGLAPQQQLQDLQAAGLGAVMQGRVALGA 444

Query: 287 APLHLPVL--RVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLV 329
           AP+HL  L  +V  +   A      E     PVG     L  GLV
Sbjct: 445 APVHLGALLQQVAGDLTVALVARDHEARVAVPVGH----LQVGLV 485


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 19/115 (16%)

Query: 290 HLPVLRVVAESHAAAAGHHTEGGEG----------RPVGEGRALLHQGLVDGALAIQH-- 337
           HL V+ +V      AAG    GG G          R  G G A +   ++ GAL ++   
Sbjct: 351 HLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQW 410

Query: 338 ---HYGAAAQADLENVAVAPRQ--ASEREVSRLAHRRRVSDQWPRKRA-RGRGPE 386
              H G A Q  L+  A  P +  A  +E  R A  R    +  R R  RG GPE
Sbjct: 411 VLVHAGQAGQ-PLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPE 464


>gi|239748899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 368 RRRVSDQWPRKRARGRGPELPPPLP 392
           RR+    WPR  A GR P LPP LP
Sbjct: 11  RRQAGVTWPRAGAGGRPPLLPPSLP 35


>gi|239746791 PREDICTED: hypothetical protein XP_002343850 [Homo
           sapiens]
          Length = 252

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 24/129 (18%)

Query: 268 DLAAARLAREEVAHHAVGCAPLHLPVLRVVAESHAAAAGHHTEGGEGRPVGEGRALLHQG 327
           DL  A L R++V H               + +  AA AG   +G E R  GE   +    
Sbjct: 46  DLGQAVLGRQQVLH--------------ALLDLVAAEAGAEQDGDEHRRRGEEDRVTGNE 91

Query: 328 LVDGALAIQHHYGAAAQADLENVAVAPRQASEREVSRLAHRRRVSDQWPRKRARGRGPEL 387
           + +             QA ++N+   PR    RE      RR V+ +W      G+    
Sbjct: 92  VAEPG-------ETRPQAPVQNLPQHPRAERAREEGEAHARRGVAPEW---IGAGQLCCT 141

Query: 388 PPPLPQQPL 396
           PP LP  PL
Sbjct: 142 PPNLPPSPL 150


>gi|169213518 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 497

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 36/105 (34%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 228 HDVGHG-HDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAARLAREEVAHHAVGC 286
           HDVG   H G+  R    AV    H      A LA    L+DL AA L        A+G 
Sbjct: 393 HDVGVARHAGREQRGH--AVAVTFH------AGLAPQQQLQDLQAAGLGAVMQGRVALGA 444

Query: 287 APLHLPVL--RVVAESHAAAAGHHTEGGEGRPVGEGRALLHQGLV 329
           AP+HL  L  +V  +   A      E     PVG     L  GLV
Sbjct: 445 APVHLGALLQQVAGDLTVALVARDHEARVAVPVGH----LQVGLV 485


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,811,332
Number of Sequences: 37866
Number of extensions: 881561
Number of successful extensions: 3464
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 3436
Number of HSP's gapped (non-prelim): 86
length of query: 407
length of database: 18,247,518
effective HSP length: 105
effective length of query: 302
effective length of database: 14,271,588
effective search space: 4310019576
effective search space used: 4310019576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.