Guide to the Human Genome
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Name: PI4K2A Sequence: fasta or formatted (479aa) NCBI GI: 13559514
Description:

phosphatidylinositol 4-kinase type 2 alpha

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         45           5
 C cysteine            1.5          7           2
 D aspartate           5.6         27           1
 E glutamate           6.1         29           2
 F phenylalanine       5.0         24           2
 G glycine             5.6         27           2
 H histidine           1.9          9           1
 I isoleucine          4.0         19           2
 K lysine              5.8         28           2
 L leucine             8.4         40           3
 M methionine          0.8          4           1
 N asparagine          3.3         16           1
 P proline             8.4         40           2
 Q glutamine           6.3         30           1
 R arginine            6.7         32           2
 S serine              6.7         32           4
 T threonine           2.7         13           1
 V valine              6.7         32           3
 W tryptophan          2.1         10           2
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol 4-kinase type 2 alpha 
PI4K2B                0.557   phosphatidylinositol 4-kinase type 2 beta 
SOX12                 0.015   SRY (sex determining region Y)-box 12 
PHOX2B                0.013   paired-like homeobox 2b 
LOC728650             0.011   PREDICTED: hypothetical protein 
MLL2                  0.010   myeloid/lymphoid or mixed-lineage leukemia 2 
NR2F2                 0.010   nuclear receptor subfamily 2, group F, member 2 isof...
LOC728650             0.010   PREDICTED: hypothetical protein 
ZIC2                  0.010   zinc finger protein of the cerebellum 2 
NLK                   0.010   nemo like kinase 
HECA                  0.010   headcase 
SHROOM1               0.009   shroom family member 1 
ARID3A                0.008   AT rich interactive domain 3A (BRIGHT- like) protein ...
CASKIN1               0.008   CASK interacting protein 1 
EPB41L3               0.008   erythrocyte membrane protein band 4.1-like 3 
NKX2-4                0.008   NK2 homeobox 4 
DDX51                 0.008   DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 
NFKBIE                0.008   nuclear factor of kappa light polypeptide gene enhan...
LOC100133636          0.008   PREDICTED: similar to hCG1806822 
LOC100288573          0.008   PREDICTED: hypothetical protein XP_002343799 
TSC22D2               0.008   TSC22 domain family, member 2 
BTBD2                 0.008   BTB (POZ) domain containing 2 
SNIP                  0.008   SNAP25-interacting protein 
MEX3C                 0.008   ring finger and KH domain containing 2 
BTBD11                0.008   BTB (POZ) domain containing 11 isoform a 
AHDC1                 0.008   AT hook, DNA binding motif, containing 1 
LOC100292866          0.007   PREDICTED: hypothetical protein 
LOC100290853          0.007   PREDICTED: hypothetical protein XP_002348232 
LOC100288457          0.007   PREDICTED: hypothetical protein XP_002342255 
GRIN2D                0.007   N-methyl-D-aspartate receptor subunit 2D precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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